RLG00000020677

ABC transporter G family member

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
67419587 .. 67425299
5713 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020677

Sequence Viewer

Length: 2157 bp
ATGGCTTCTGGTAGATTCCATTCAAATGTCCGACACATCGATGCTACGTTTGAAAATGAATATGGTTACCACACCAGTAATCCCACAGGATTACTGGAGATTGAAACAGTTGCTAGAGGAGCTTCCATCCTGGAGATTGAAACAGTTGCTGGAGGAGCATCATTCCGAGACCGAAACCGAAACCATGTAGTTCCATTAACTGTAGGTGATGAGGGTGTTTCCTTAACTGTAGTTCCATTAACTGTAGGTGATGAGGGTGTTTCCTTGACATGGCAAGATTTGTGGGTGAGAGTAGAAGGAAGAAGCTGTAGATCAATCCTCCAAGGGCTAACTGGTTATGCCAAACCAGGGCAACTTTTGGCTATAATGGGTCCTTCTGGTTGTGGCAAGTCTACTCTTCTTGATGCTTTGGCAGGGAGACTCAGTTCAAACACAAGGCAAACAGGGGAGATCCTAATCAATGGACATAAACAAGCACTGGCTTATGGAACTTCTGCATATGTGACACAAGATGATACTCTAATCACAACATTAACAGTCGAAGAAGCCGTATACTACTCAGCTCAGCTGCAATTACCAGACTCCATGTCCAAGTCGGAAAAGAAGGAGAGAGCACAGGCAACGATAAGAGAGATGGGTTTGCAAGATGCCATGAACACGAGGATCGGAGGTTGGGGAGCCAAAGGCCTCAGTGGCGGCCAAAAGAGAAGAGTCAGCATTTGCATTGAGCTTCTTCCGCGACCAAAGCTTCTCTTCTTGGACGAGCCAACAAGCGGGCTTGACAGCGCGGCGTCGTATTATGTGATGAGCCGAATTGCAAATCTTGGTTGTCATAAATCCTCGCCGAGGACTATTGTTGCTTCCATCCATCAGCCTAGCTCTGAAGTCTTTCAACTCTTTGACAATCTTTGTCTTCTGTCTTCGGGTAGAACTGTGTATTTCGGTCCTGCTTCTGCTGCCAATGAGTTTTTTGCTGCAAGTGGTTTCCCATGCCCAACTCTTCAAAATCCATCAGATCACTTCCTCAAGACCATAAACAAAGATTTTGAGCAGGACATTGAGAAAGGCATAGCTGGAACCACACCCACAGAGGAAGCCATTGATACTCTAATAAAGTCTTACAAATCATCTGAAAATTATCACCAACTTCAAAGACATATAGCTGAACTACATAAGAAGGATTGTGAAGCATTAGAAAGGAGAAGCCACGCTGGCTTTCTTACACAATCTTTCGTGCTTACAAGAAGATCGTTCGTAAACATGTATCGAGATCGAGGCTACTACTGGTTGCGCCTTGTTATCTACACCGGCATAGCTGTAGGCTTAGGCGTTGTCTATCATGATCTTGGACATACTTATGGATCGATCCAGGCAAGGGGCTCGATGCTTTCGTTTATAGCTTCATTTTTAACTTTCATGGCCATTGGTGGGTTTCCTTCCTTTGTGGAAGACATGAAGGTATTTGAACGCGAGAGACTGAACGGGCACTATGGTGTTAGTGCATTTGTTTTCGGCAACACATTTTCCTCGGTCCCTTTCTTGATGTTAATTTCACTGATTCCTGGAGCAACAGCATATTACCTTGCCGGACTTCACAGTGGATTCGAACACTTCTTCTACTTTGCTTCTACACTATTTGCTTGCACAATGCTGGTTGAGAGCCTAATGATGATAATTGCGAGCATCGTGCCAAACTACCTGATGGGCATAATAGCTGGTGCTGGAATCCAAGGTGTAATGATTTTATGCGGTGGATTCTTCCAGCTACCGAATGATCTCCCGGATGTTTTGTTCAAGTACCCATTATATCACATTGCTTTCCATAAGTACGCATTCCAGGGAATGTTTAAGAATGAATTTTCAAGAACAAAATATTTAAACGACAATCTTCTCGGAATGAGCTCCTCTAAATGGCTCAGTGGTGAACGCATTTTGAAAGATAAATGGCAGGTGGAAATGGGTTACTCCAAATGGGTTGATCTTGCTATCTTGTTAGGAATGGTAGTTCTGTATCGAATTTTGTTCTTCGTTATCATCAAGACCACTGAGAAAGTGAAGACTATTACCTCAGCTCTTCTATCCGTGGCTCCTAAGCGAAGCATGCAAGTACTGGTGAATCCCTCCTCTACTCCACTGCATGGAGAGTGTTCGAAGTAA

Protein Analysis

719

Amino Acids

79.34

Weight (kDa)

8.18

Isoelectric Point (pI)

43.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 107 - 258 2.8e-28 ABC transporter
ABC2_membrane_7 PF19055 290 - 345 2.4e-09 ABC-2 type transporter
ABC2_membrane PF01061 408 - 620 2e-39 ABC-2 type transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000287)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20410 FvH4_1g20410 FvH4_6g39250 FvH4_6g39250
malus_domestica MD00G1036800.v1.1 MD05G1042600.v1.1 MD10G1049900.v1.1
prunus_persica Prupe.6G191500_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064400_v2.0.a1
pyrus_communis pycom05g03520 pycom10g03500 pycom10g03510 pycom15g28250
rosa_chinensis RchiOBHm_Chr1g0336561 RchiOBHm_Chr2g0112551 RchiOBHm_Chr2g0112561 RchiOBHm_Chr2g0112631 RchiOBHm_Chr2g0112641 RchiOBHm_Chr2g0153091 RchiOBHm_Chr2g0153111 RchiOBHm_Chr2g0153141 RchiOBHm_Chr2g0153161 RchiOBHm_Chr2g0153171
rosa_laevigata RLG00000017991 RLG00000017992 RLG00000017995 RLG00000017997 RLG00000020676 RLG00000020677 RLG00000020678 RLG00000020682
rosa_multiflora Rmu_co8208234.1_g000001 Rmu_co8218328.1_g000001 Rmu_co8425243.1_g000001 Rmu_sc0000218.1_g000037 Rmu_sc0000218.1_g000044 Rmu_sc0000218.1_g000047 Rmu_sc0000218.1_g000052 Rmu_sc0001155.1_g000011 Rmu_sc0001155.1_g000026 Rmu_sc0001155.1_g000029 Rmu_sc0001499.1_g000001 Rmu_sc0001499.1_g000040 Rmu_sc0002401.1_g000032 Rmu_sc0002401.1_g000033 Rmu_sc0004070.1_g000003 Rmu_sc0004070.1_g000004 Rmu_sc0005547.1_g000001 Rmu_sc0006062.1_g000002 Rmu_sc0009780.1_g000005 Rmu_sc0013071.1_g000001 Rmu_sc0013071.1_g000012
rosa_roxburghii Rroxscaffold_2G00095130 Rroxscaffold_2G00095140 Rroxscaffold_2G00095160 Rroxscaffold_2G00095180 Rroxscaffold_2G00095190 Rroxscaffold_2G00095200 Rroxscaffold_2G00131290 Rroxscaffold_2G00131320 Rroxscaffold_2G00131350
rosa_rugosa Rorug02G0181500 Rorug02G0181500 Rorug02G0181600 Rorug02G0181700 Rorug02G0437300 Rorug02G0437400
rosa_samantha Rh1DG154100 Rh2AG235200 Rh2AG235300 Rh2AG235400 Rh2AG235600 Rh2AG235800 Rh2AG499700 Rh2AG499800 Rh2AG500000 Rh2AG500100 Rh2AG500200 Rh2BG248500 Rh2BG248700 Rh2BG248800 Rh2BG511000 Rh2BG511200 Rh2BG511300 Rh2BG511600 Rh2CG239600 Rh2CG239700 Rh2CG239900 Rh2CG240000 Rh2CG485900 Rh2CG486000 Rh2CG486200 Rh2CG486300 Rh2CG486400 Rh2DG242500 Rh2DG242600 Rh2DG242700 Rh2DG242900 Rh2DG243100 Rh2DG522800 Rh2DG523100 Rh2DG523200 Rh2DG523500 Rh2DG523600 Rh5DG200200
rosa_wichuraiana Rw2G018200 Rw2G018210 Rw2G018230 Rw2G018240 Rw2G041010 Rw2G041020 Rw2G041030 Rw2G041050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1939
Acc36I ACCTGC 1 cut(s) 1939
AccB7I CCANNNNNTGG 1 cut(s) 2138
AccI GTMKAC 2 cut(s) 392, 552
AccII CGCG 3 cut(s) 739, 788, 1470
AciI CCGC 5 cut(s) 696, 737, 774, 788, 1749
AclWI GGATC 4 cut(s) 445, 671, 1360, 1369
AcoI YGGCCR 2 cut(s) 697, 1419
AcsI RAATTY 2 cut(s) 1856, 2016
AcuI CTGAAG 1 cut(s) 903
AcyI GRCGYC 1 cut(s) 791
AfaI GTAC 3 cut(s) 1799, 1829, 2109
AfiI CCNNNNNNNGG 8 cut(s) 270, 348, 773, 846, 1375, 1428, 1911, 2138
AflIII ACRYGT 1 cut(s) 1260
AhdI GACNNNNNGTC 1 cut(s) 586
AjnI CCWGG 5 cut(s) 129, 346, 1368, 1561, 1836
AleI CACNNNNGTG 1 cut(s) 1491
AloI GAACNNNNNNTCC 6 cut(s) 409, 441, 1775, 1807, 1989, 2021
Alw21I GWGCWC 2 cut(s) 616, 1904
Alw26I GTCTC 3 cut(s) 162, 412, 1468
AlwI GGATC 4 cut(s) 445, 671, 1360, 1369
AlwNI CAGNNNCTG 1 cut(s) 149
AoxI GGCC 3 cut(s) 685, 697, 1419
ApeKI GCWGC 3 cut(s) 568, 956, 974
ApoI RAATTY 2 cut(s) 1856, 2016
Asp700I GAANNNNTTC 1 cut(s) 888
AspLEI GCGC 2 cut(s) 788, 1293
AspS9I GGNCC 3 cut(s) 371, 944, 1531
AsuC2I CCSGG 1 cut(s) 1781
AsuHPI GGTGA 6 cut(s) 218, 260, 298, 1133, 1934, 2125
AsuII TTCGAA 2 cut(s) 1605, 2150
AvaII GGWCC 3 cut(s) 371, 944, 1531
BaeGI GKGCMC 1 cut(s) 1488
BalI TGGCCA 1 cut(s) 1421
BanII GRGCYC 2 cut(s) 1382, 1904
BauI CACGAG 1 cut(s) 658
BbsI GAAGAC 4 cut(s) 905, 912, 1455, 2063
Bbv12I GWGCWC 2 cut(s) 616, 1904
BbvCI CCTCAGC 1 cut(s) 2068
BbvI GCAGC 3 cut(s) 555, 943, 961
BccI CCATC 6 cut(s) 134, 628, 872, 876, 1018, 1696
BceAI ACGGC 1 cut(s) 533
BcgI CGANNNNNNTGC 4 cut(s) 1362, 1396, 1669, 1703
BciT130I CCWGG 5 cut(s) 131, 348, 1370, 1563, 1838
BcnI CCSGG 1 cut(s) 1781
BcoDI GTCTC 3 cut(s) 162, 412, 1468
BfaI CTAG 2 cut(s) 114, 876
BfmI CTRYAG 5 cut(s) 201, 228, 243, 307, 1317
BfuAI ACCTGC 1 cut(s) 1939
BglI GCCNNNNNGGC 2 cut(s) 693, 1212
BisI GCNGC 5 cut(s) 569, 697, 789, 957, 975
BlpI GCTNAGC 1 cut(s) 564
BlsI GCNGC 5 cut(s) 570, 698, 790, 958, 976
BmcAI AGTACT 1 cut(s) 2109
Bme1390I CCNGG 6 cut(s) 131, 348, 1370, 1563, 1781, 1838
Bme18I GGWCC 3 cut(s) 371, 944, 1531
BmeRI GACNNNNNGTC 1 cut(s) 586
BmgT120I GGNCC 3 cut(s) 371, 944, 1531
BmiI GGNNCC 5 cut(s) 372, 679, 1078, 1533, 2088
BmrFI CCNGG 6 cut(s) 131, 348, 1370, 1563, 1781, 1838
BmsI GCATC 6 cut(s) 31, 167, 394, 637, 1374, 1692
BpiI GAAGAC 4 cut(s) 905, 912, 1455, 2063
BpmI CTGGAG 4 cut(s) 116, 152, 171, 1584
Bpu10I CCTNAGC 3 cut(s) 1324, 2068, 2091
Bpu1102I GCTNAGC 1 cut(s) 564
Bpu14I TTCGAA 2 cut(s) 1605, 2150
BpuEI CTTGAG 1 cut(s) 1010
BpuMI CCSGG 1 cut(s) 1781
Bsa29I ATCGAT 2 cut(s) 39, 1364
BsaBI GATNNNNATC 1 cut(s) 455
BsaHI GRCGYC 1 cut(s) 791
BsaI GGTCTC 1 cut(s) 162
BsaJI CCNNGG 7 cut(s) 322, 347, 845, 1527, 1729, 1837, 2082
BsaXI ACNNNNNCTCC 2 cut(s) 409, 439
Bsc4I CCNNNNNNNGG 8 cut(s) 270, 348, 773, 846, 1375, 1428, 1911, 2138
Bse118I RCCGGY 1 cut(s) 1307
Bse1I ACTGG 6 cut(s) 75, 99, 337, 483, 1289, 2115
Bse3DI GCAATG 1 cut(s) 1812
Bse8I GATNNNNATC 1 cut(s) 455
BseBI CCWGG 5 cut(s) 131, 348, 1370, 1563, 1838
BseCI ATCGAT 2 cut(s) 39, 1364
BseDI CCNNGG 7 cut(s) 322, 347, 845, 1527, 1729, 1837, 2082
BseGI GGATG 3 cut(s) 126, 864, 1789
BseJI GATNNNNATC 1 cut(s) 455
BseLI CCNNNNNNNGG 8 cut(s) 270, 348, 773, 846, 1375, 1428, 1911, 2138
BseMI GCAATG 1 cut(s) 1812
BseMII CTCAG 7 cut(s) 436, 573, 578, 703, 1930, 2037, 2082
BseNI ACTGG 6 cut(s) 75, 99, 337, 483, 1289, 2115
BseRI GAGGAG 4 cut(s) 132, 168, 1894, 2113
BseSI GKGCMC 1 cut(s) 1488
BseXI GCAGC 3 cut(s) 555, 943, 961
Bsh1236I CGCG 3 cut(s) 739, 788, 1470
BshFI GGCC 3 cut(s) 687, 699, 1421
BshVI ATCGAT 2 cut(s) 39, 1364
BsiHKAI GWGCWC 2 cut(s) 616, 1904
BsiSI CCGG 3 cut(s) 1308, 1587, 1781
BslFI GGGAC 1 cut(s) 1517
BslI CCNNNNNNNGG 8 cut(s) 270, 348, 773, 846, 1375, 1428, 1911, 2138
BsmAI GTCTC 3 cut(s) 162, 412, 1468
BsmFI GGGAC 1 cut(s) 1517
BsmI GAATGC 1 cut(s) 1832
BsnI GGCC 3 cut(s) 687, 699, 1421
Bso31I GGTCTC 1 cut(s) 162
Bsp119I TTCGAA 2 cut(s) 1605, 2150
Bsp1286I GDGCHC 4 cut(s) 616, 1382, 1488, 1904
Bsp1720I GCTNAGC 1 cut(s) 564
BspACI CCGC 5 cut(s) 696, 737, 774, 788, 1749
BspANI GGCC 3 cut(s) 687, 699, 1421
BspCNI CTCAG 7 cut(s) 435, 572, 577, 702, 1929, 2038, 2081
BspDI ATCGAT 2 cut(s) 39, 1364
BspFNI CGCG 3 cut(s) 739, 788, 1470
BspHI TCATGA 1 cut(s) 1339
BspLI GGNNCC 5 cut(s) 372, 679, 1078, 1533, 2088
BspMI ACCTGC 1 cut(s) 1939
BspPI GGATC 4 cut(s) 445, 671, 1360, 1369
BspQI GCTCTTC 1 cut(s) 2079
BspT104I TTCGAA 2 cut(s) 1605, 2150
BspTNI GGTCTC 1 cut(s) 162
BsrDI GCAATG 1 cut(s) 1812
BsrFI RCCGGY 1 cut(s) 1307
BsrI ACTGG 6 cut(s) 75, 99, 337, 483, 1289, 2115
BssAI RCCGGY 1 cut(s) 1307
BssECI CCNNGG 7 cut(s) 322, 347, 845, 1527, 1729, 1837, 2082
BssNAI GTATAC 1 cut(s) 553
BssNI GRCGYC 1 cut(s) 791
BssSI CACGAG 1 cut(s) 658
BssT1I CCWWGG 2 cut(s) 322, 1729
Bst1107I GTATAC 1 cut(s) 553
Bst2BI CACGAG 1 cut(s) 658
Bst2UI CCWGG 5 cut(s) 131, 348, 1370, 1563, 1838
Bst4CI ACNGT 8 cut(s) 109, 145, 202, 229, 244, 538, 934, 1598
Bst6I CTCTTC 5 cut(s) 402, 703, 758, 1005, 2079
BstACI GRCGYC 1 cut(s) 791
BstBI TTCGAA 2 cut(s) 1605, 2150
BstC8I GCNNGC 5 cut(s) 776, 1213, 1642, 1681, 2102
BstDEI CTNAG 9 cut(s) 422, 559, 564, 689, 1324, 1916, 2046, 2068, 2091
BstDSI CCRYGG 1 cut(s) 2082
BstEII GGTNACC 1 cut(s) 65
BstENI CCTNNNNNAGG 1 cut(s) 844
BstF5I GGATG 3 cut(s) 126, 864, 1789
BstFNI CGCG 3 cut(s) 739, 788, 1470
BstHHI GCGC 2 cut(s) 788, 1293
BstMAI GTCTC 3 cut(s) 162, 412, 1468
BstMWI GCNNNNNNNGC 8 cut(s) 119, 155, 693, 736, 745, 956, 1212, 2101
BstNI CCWGG 5 cut(s) 131, 348, 1370, 1563, 1838
BstNSI RCATGY 2 cut(s) 1264, 2104
BstPI GGTNACC 1 cut(s) 65
BstSCI CCNGG 6 cut(s) 129, 346, 1368, 1561, 1779, 1836
BstSFI CTRYAG 5 cut(s) 201, 228, 243, 307, 1317
BstSLI GKGCMC 1 cut(s) 1488
BstUI CGCG 3 cut(s) 739, 788, 1470
BstV1I GCAGC 3 cut(s) 555, 943, 961
BstV2I GAAGAC 4 cut(s) 905, 912, 1455, 2063
BstX2I RGATCY 1 cut(s) 450
BstYI RGATCY 1 cut(s) 450
BstZ17I GTATAC 1 cut(s) 553
Bsu15I ATCGAT 2 cut(s) 39, 1364
BsuRI GGCC 3 cut(s) 687, 699, 1421
BsuTUI ATCGAT 2 cut(s) 39, 1364
BtgI CCRYGG 1 cut(s) 2082
BtsCI GGATG 3 cut(s) 126, 864, 1789
BtsI GCAGTG 1 cut(s) 2132
BtsIMutI CAGTG 7 cut(s) 476, 697, 1553, 1603, 1924, 2043, 2132
BveI ACCTGC 1 cut(s) 1939
Cac8I GCNNGC 5 cut(s) 776, 1213, 1642, 1681, 2102
CaiI CAGNNNCTG 1 cut(s) 149
CciI TCATGA 1 cut(s) 1339
CfoI GCGC 2 cut(s) 788, 1293
Cfr10I RCCGGY 1 cut(s) 1307
Cfr13I GGNCC 3 cut(s) 371, 944, 1531
ClaI ATCGAT 2 cut(s) 39, 1364
CseI GACGC 1 cut(s) 780
Csp6I GTAC 3 cut(s) 1798, 1828, 2108
CspCI CAANNNNNGTGG 2 cut(s) 263, 298
CviQI GTAC 3 cut(s) 1798, 1828, 2108
DdeI CTNAG 9 cut(s) 422, 559, 564, 689, 1324, 1916, 2046, 2068, 2091
DraI TTTAAA 1 cut(s) 1878
DriI GACNNNNNGTC 1 cut(s) 586
EaeI YGGCCR 2 cut(s) 697, 1419
Eam1104I CTCTTC 5 cut(s) 402, 703, 758, 1005, 2079
Eam1105I GACNNNNNGTC 1 cut(s) 586
EarI CTCTTC 5 cut(s) 402, 703, 758, 1005, 2079
Ecl136II GAGCTC 1 cut(s) 1902
Eco130I CCWWGG 2 cut(s) 322, 1729
Eco147I AGGCCT 1 cut(s) 687
Eco24I GRGCYC 2 cut(s) 1382, 1904
Eco31I GGTCTC 1 cut(s) 162
Eco47I GGWCC 3 cut(s) 371, 944, 1531
Eco53kI GAGCTC 1 cut(s) 1902
Eco57I CTGAAG 1 cut(s) 903
Eco91I GGTNACC 1 cut(s) 65
EcoICRI GAGCTC 1 cut(s) 1902
EcoNI CCTNNNNNAGG 1 cut(s) 844
EcoO109I RGGNCCY 1 cut(s) 371
EcoO65I GGTNACC 1 cut(s) 65
EcoRII CCWGG 5 cut(s) 129, 346, 1368, 1561, 1836
EcoT14I CCWWGG 2 cut(s) 322, 1729
EcoT38I GRGCYC 2 cut(s) 1382, 1904
ErhI CCWWGG 2 cut(s) 322, 1729
FalI AAGNNNNNCTT 2 cut(s) 737, 769
FaqI GGGAC 1 cut(s) 1517
FauI CCCGC 1 cut(s) 767
FauNDI CATATG 1 cut(s) 499
FblI GTMKAC 2 cut(s) 392, 552
Fnu4HI GCNGC 5 cut(s) 569, 697, 789, 957, 975
FokI GGATG 3 cut(s) 113, 851, 1796
FriOI GRGCYC 2 cut(s) 1382, 1904
Fsp4HI GCNGC 5 cut(s) 569, 697, 789, 957, 975
FspBI CTAG 2 cut(s) 114, 876
GlaI GCGC 2 cut(s) 787, 1292
GluI GCNGC 5 cut(s) 569, 697, 789, 957, 975
GsuI CTGGAG 4 cut(s) 116, 152, 171, 1584
HaeIII GGCC 3 cut(s) 687, 699, 1421
HapII CCGG 3 cut(s) 1308, 1587, 1781
HgaI GACGC 1 cut(s) 780
HhaI GCGC 2 cut(s) 788, 1293
Hin1I GRCGYC 1 cut(s) 791
Hin6I GCGC 2 cut(s) 786, 1291
HinP1I GCGC 2 cut(s) 786, 1291
HindIII AAGCTT 1 cut(s) 746
HinfI GANTC 9 cut(s) 15, 420, 581, 711, 1558, 1602, 1725, 1755, 2116
HpaII CCGG 3 cut(s) 1308, 1587, 1781
HphI GGTGA 6 cut(s) 218, 260, 298, 1133, 1934, 2125
Hpy166II GTNNAC 4 cut(s) 393, 553, 1258, 1925
Hpy188I TCNGA 8 cut(s) 32, 167, 598, 668, 883, 1015, 1132, 1895
Hpy188III TCNNGA 7 cut(s) 401, 1027, 1268, 1340, 1540, 1863, 2038
Hpy8I GTNNAC 4 cut(s) 393, 553, 1258, 1925
Hpy99I CGWCG 1 cut(s) 796
HpyAV CCTTC 6 cut(s) 290, 384, 598, 1171, 1446, 1450
HpyCH4III ACNGT 8 cut(s) 109, 145, 202, 229, 244, 538, 934, 1598
HpyCH4IV ACGT 1 cut(s) 47
HpyF10VI GCNNNNNNNGC 8 cut(s) 119, 155, 693, 736, 745, 956, 1212, 2101
HpyF3I CTNAG 9 cut(s) 422, 559, 564, 689, 1324, 1916, 2046, 2068, 2091
HpySE526I ACGT 1 cut(s) 47
Hsp92I GRCGYC 1 cut(s) 791
HspAI GCGC 2 cut(s) 786, 1291
LguI GCTCTTC 1 cut(s) 2079
LmnI GCTCC 6 cut(s) 119, 155, 677, 1565, 1907, 2092
Lsp1109I GCAGC 3 cut(s) 555, 943, 961
LweI GCATC 6 cut(s) 31, 167, 394, 637, 1374, 1692
MaeI CTAG 2 cut(s) 114, 876
MaeII ACGT 1 cut(s) 47
MaeIII GTNAC 3 cut(s) 65, 502, 1961
MflI RGATCY 1 cut(s) 450
MhlI GDGCHC 4 cut(s) 616, 1382, 1488, 1904
MlsI TGGCCA 1 cut(s) 1421
MluCI AATT 7 cut(s) 572, 813, 1135, 1548, 1674, 1856, 2016
MluNI TGGCCA 1 cut(s) 1421
MlyI GAGTC 3 cut(s) 414, 575, 720
MmeI TCCRAC 2 cut(s) 55, 576
Mox20I TGGCCA 1 cut(s) 1421
MroXI GAANNNNTTC 1 cut(s) 888
MscI TGGCCA 1 cut(s) 1421
MseI TTAA 8 cut(s) 197, 224, 239, 533, 1409, 1547, 1848, 1877
MslI CAYNNNNRTG 4 cut(s) 24, 39, 1356, 1491
Msp20I TGGCCA 1 cut(s) 1421
MspA1I CMGCKG 1 cut(s) 568
MspI CCGG 3 cut(s) 1308, 1587, 1781
MspR9I CCNGG 6 cut(s) 131, 348, 1370, 1563, 1781, 1838
Mva1269I GAATGC 1 cut(s) 1832
MvaI CCWGG 5 cut(s) 131, 348, 1370, 1563, 1838
MvnI CGCG 3 cut(s) 739, 788, 1470
MwoI GCNNNNNNNGC 8 cut(s) 119, 155, 693, 736, 745, 956, 1212, 2101
NciI CCSGG 1 cut(s) 1781
NdeI CATATG 1 cut(s) 499
NlaIV GGNNCC 5 cut(s) 372, 679, 1078, 1533, 2088
NmeAIII GCCGAG 1 cut(s) 870
NmuCI GTSAC 1 cut(s) 502
NspI RCATGY 2 cut(s) 1264, 2104
NspV TTCGAA 2 cut(s) 1605, 2150
OliI CACNNNNGTG 1 cut(s) 1491
PaeI GCATGC 1 cut(s) 2104
PagI TCATGA 1 cut(s) 1339
PaqCI CACCTGC 1 cut(s) 1939
PceI AGGCCT 1 cut(s) 687
PciI ACATGT 1 cut(s) 1260
PciSI GCTCTTC 1 cut(s) 2079
PcsI WCGNNNNNNNCGW 2 cut(s) 546, 1388
PctI GAATGC 1 cut(s) 1832
PdmI GAANNNNTTC 1 cut(s) 888
PfeI GAWTC 6 cut(s) 15, 1558, 1602, 1725, 1755, 2116
PflMI CCANNNNNTGG 1 cut(s) 2138
PfoI TCCNGGA 3 cut(s) 129, 1561, 1779
PkrI GCNGC 5 cut(s) 570, 698, 790, 958, 976
PleI GAGTC 3 cut(s) 414, 575, 719
PpsI GAGTC 3 cut(s) 414, 575, 719
PpuMI RGGWCCY 1 cut(s) 371
PscI ACATGT 1 cut(s) 1260
Psp124BI GAGCTC 1 cut(s) 1904
Psp5II RGGWCCY 1 cut(s) 371
Psp6I CCWGG 5 cut(s) 129, 346, 1368, 1561, 1836
PspEI GGTNACC 1 cut(s) 65
PspGI CCWGG 5 cut(s) 129, 346, 1368, 1561, 1836
PspN4I GGNNCC 5 cut(s) 372, 679, 1078, 1533, 2088
PspPI GGNCC 3 cut(s) 371, 944, 1531
PspPPI RGGWCCY 1 cut(s) 371
PstNI CAGNNNCTG 1 cut(s) 149
PsuI RGATCY 1 cut(s) 450
PvuII CAGCTG 1 cut(s) 568
RsaI GTAC 3 cut(s) 1799, 1829, 2109
RsaNI GTAC 3 cut(s) 1798, 1828, 2108
RseI CAYNNNNRTG 4 cut(s) 24, 39, 1356, 1491
SacI GAGCTC 1 cut(s) 1904
SapI GCTCTTC 1 cut(s) 2079
SaqAI TTAA 8 cut(s) 197, 224, 239, 533, 1409, 1547, 1848, 1877
SatI GCNGC 5 cut(s) 569, 697, 789, 957, 975
Sau96I GGNCC 3 cut(s) 371, 944, 1531
ScaI AGTACT 1 cut(s) 2109
SchI GAGTC 3 cut(s) 414, 575, 720
ScrFI CCNGG 6 cut(s) 131, 348, 1370, 1563, 1781, 1838
SduI GDGCHC 4 cut(s) 616, 1382, 1488, 1904
SfaNI GCATC 6 cut(s) 31, 167, 394, 637, 1374, 1692
SfcI CTRYAG 5 cut(s) 201, 228, 243, 307, 1317
SfuI TTCGAA 2 cut(s) 1605, 2150
SinI GGWCC 3 cut(s) 371, 944, 1531
SmiMI CAYNNNNRTG 4 cut(s) 24, 39, 1356, 1491
SmlI CTYRAG 1 cut(s) 1025
SmoI CTYRAG 1 cut(s) 1025
SphI GCATGC 1 cut(s) 2104
Sse9I AATT 7 cut(s) 572, 813, 1135, 1548, 1674, 1856, 2016
SseBI AGGCCT 1 cut(s) 687
SsiI CCGC 5 cut(s) 696, 737, 774, 788, 1749
SspI AATATT 1 cut(s) 1874
SspMI CTAG 2 cut(s) 114, 876
SstI GAGCTC 1 cut(s) 1904
StuI AGGCCT 1 cut(s) 687
StyD4I CCNGG 6 cut(s) 129, 346, 1368, 1561, 1779, 1836
StyI CCWWGG 2 cut(s) 322, 1729
TaaI ACNGT 8 cut(s) 109, 145, 202, 229, 244, 538, 934, 1598
TaiI ACGT 1 cut(s) 50
TaqI TCGA 9 cut(s) 39, 540, 1267, 1273, 1364, 1382, 1605, 2014, 2150
TaqII GACCGA 3 cut(s) 186, 932, 1519
TasI AATT 7 cut(s) 572, 813, 1135, 1548, 1674, 1856, 2016
TatI WGTACW 1 cut(s) 2107
TauI GCSGC 2 cut(s) 699, 791
TfiI GAWTC 6 cut(s) 15, 1558, 1602, 1725, 1755, 2116
Tru1I TTAA 8 cut(s) 197, 224, 239, 533, 1409, 1547, 1848, 1877
Tru9I TTAA 8 cut(s) 197, 224, 239, 533, 1409, 1547, 1848, 1877
TscAI CASTG 7 cut(s) 483, 697, 1560, 1603, 1924, 2050, 2139
TseFI GTSAC 1 cut(s) 502
TseI GCWGC 3 cut(s) 568, 956, 974
Tsp45I GTSAC 1 cut(s) 502
TspDTI ATGAA 6 cut(s) 72, 668, 1392, 1405, 1469, 1869
TspGWI ACGGA 1 cut(s) 2071
TspRI CASTG 7 cut(s) 483, 697, 1560, 1603, 1924, 2050, 2139
Van91I CCANNNNNTGG 1 cut(s) 2138
VpaK11BI GGWCC 3 cut(s) 371, 944, 1531
XagI CCTNNNNNAGG 1 cut(s) 844
XapI RAATTY 2 cut(s) 1856, 2016
XceI RCATGY 2 cut(s) 1264, 2104
XcmI CCANNNNNNNNNTGG 2 cut(s) 91, 329
XmiI GTMKAC 2 cut(s) 392, 552
XmnI GAANNNNTTC 1 cut(s) 888
XspI CTAG 2 cut(s) 114, 876
ZrmI AGTACT 1 cut(s) 2109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.