Rmu_sc0001155.1_g000029

ABC transporter G family member

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001155.1
Physical Location & Seq
Forward (+)
121989 .. 126848
4860 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001155.1_g000029.1.cds

Sequence Viewer

Length: 1374 bp
atgatcgtccgtagtcttaatcctgaaaaggatcctcttcgtcgaaaggataatgacgaagatgtgctagaggcagaagtgccttacttaatgtacgatccatatgggcttgttctatccctacgaagagatgatggattcggacccatcacacaccagaaacgccgccaacgctggcctgcgttctctatccccatcccaaaacgacatgtgttttggaaggttttgctaatgttgggtatcactctgacccacacaatgcaagttcatctcaaggtaaatgagatttgccaacagggaggtggagctctggagaagggacgccaaaccaacttcataactcaatgcctggttttgacaaggagatcatttgtgaacatgtatcgcgatctaggctactactggcttcgacttgcaatttacattgccttgtgcttatgtgtagggactatttttcacgacatcggcttgacttttgggtcaatacaggctagaggatcaatgctcatgtttgttgcagcattcttaactttcatggcaataggtggatttccttcttttgtagaagacatgaagattttcgagcgtgaaagattaaacgggcactatggcgttgctgcatatgtggttggaaacacactttcctccattccatatttgctaatggtatctttaattcctggagctattgcctattaccttgttggccttcagaagagctttgaccacttcgcttattttgcattggttctatttgtgtgtctgatgttggttgagagcctgatgatgattgtagcaagcactgtgccagatttcctcatggggatcatcacgggtgctggaattcaaggaataatgatgttgaatggaggtttcttccgtttaccagacgatcttccgaagcccttttggagatacccaatgtactacattgcattccacaaatacgcaaatcaaggattctacaagaatgagtttgaaggacttacatttcccaataaccaagcaggagggccacccaccattacaggtgaagaaatattaaagggtacttggcaagtggagatgggctattctaagtgggttgatcttgctattttgttgggaatgcatcatcgcacgcctgctgcccctgcagcacagcagcacgctcgtttctgtgctgatcagcctgtttgcacaccccgaaacatcttgatcgggaccttagatcaaaaagcttccttcatcaaagttgtttgtatctgcctcttctatttggcctccaaatttcagccccattggagtcattttgagatctgtacaccattcgaagcgggagctgttcaaaagcgaatctactccgaatttcaacaagtgagttttaaagattaa

Protein Analysis

457

Amino Acids

52.0

Weight (kDa)

8.68

Isoelectric Point (pI)

39.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000287)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20410 FvH4_1g20410 FvH4_6g39250 FvH4_6g39250
malus_domestica MD00G1036800.v1.1 MD05G1042600.v1.1 MD10G1049900.v1.1
prunus_persica Prupe.6G191500_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064400_v2.0.a1
pyrus_communis pycom05g03520 pycom10g03500 pycom10g03510 pycom15g28250
rosa_chinensis RchiOBHm_Chr1g0336561 RchiOBHm_Chr2g0112551 RchiOBHm_Chr2g0112561 RchiOBHm_Chr2g0112631 RchiOBHm_Chr2g0112641 RchiOBHm_Chr2g0153091 RchiOBHm_Chr2g0153111 RchiOBHm_Chr2g0153141 RchiOBHm_Chr2g0153161 RchiOBHm_Chr2g0153171
rosa_laevigata RLG00000017991 RLG00000017992 RLG00000017995 RLG00000017997 RLG00000020676 RLG00000020677 RLG00000020678 RLG00000020682
rosa_multiflora Rmu_co8208234.1_g000001 Rmu_co8218328.1_g000001 Rmu_co8425243.1_g000001 Rmu_sc0000218.1_g000037 Rmu_sc0000218.1_g000044 Rmu_sc0000218.1_g000047 Rmu_sc0000218.1_g000052 Rmu_sc0001155.1_g000011 Rmu_sc0001155.1_g000026 Rmu_sc0001155.1_g000029 Rmu_sc0001499.1_g000001 Rmu_sc0001499.1_g000040 Rmu_sc0002401.1_g000032 Rmu_sc0002401.1_g000033 Rmu_sc0004070.1_g000003 Rmu_sc0004070.1_g000004 Rmu_sc0005547.1_g000001 Rmu_sc0006062.1_g000002 Rmu_sc0009780.1_g000005 Rmu_sc0013071.1_g000001 Rmu_sc0013071.1_g000012
rosa_roxburghii Rroxscaffold_2G00095130 Rroxscaffold_2G00095140 Rroxscaffold_2G00095160 Rroxscaffold_2G00095180 Rroxscaffold_2G00095190 Rroxscaffold_2G00095200 Rroxscaffold_2G00131290 Rroxscaffold_2G00131320 Rroxscaffold_2G00131350
rosa_rugosa Rorug02G0181500 Rorug02G0181500 Rorug02G0181600 Rorug02G0181700 Rorug02G0437300 Rorug02G0437400
rosa_samantha Rh1DG154100 Rh2AG235200 Rh2AG235300 Rh2AG235400 Rh2AG235600 Rh2AG235800 Rh2AG499700 Rh2AG499800 Rh2AG500000 Rh2AG500100 Rh2AG500200 Rh2BG248500 Rh2BG248700 Rh2BG248800 Rh2BG511000 Rh2BG511200 Rh2BG511300 Rh2BG511600 Rh2CG239600 Rh2CG239700 Rh2CG239900 Rh2CG240000 Rh2CG485900 Rh2CG486000 Rh2CG486200 Rh2CG486300 Rh2CG486400 Rh2DG242500 Rh2DG242600 Rh2DG242700 Rh2DG242900 Rh2DG243100 Rh2DG522800 Rh2DG523100 Rh2DG523200 Rh2DG523500 Rh2DG523600 Rh5DG200200
rosa_wichuraiana Rw2G018200 Rw2G018210 Rw2G018230 Rw2G018240 Rw2G041010 Rw2G041020 Rw2G041030 Rw2G041050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 478
AccII CGCG 1 cut(s) 387
AciI CCGC 2 cut(s) 166, 1316
AclWI GGATC 5 cut(s) 26, 39, 92, 505, 833
AcsI RAATTY 3 cut(s) 843, 1268, 1346
AcuI CTGAAG 1 cut(s) 695
AcyI GRCGYC 1 cut(s) 322
AfaI GTAC 4 cut(s) 95, 926, 1051, 1303
AflIII ACRYGT 2 cut(s) 208, 378
AgsI TTSAA 5 cut(s) 848, 865, 980, 1328, 1352
AjnI CCWGG 2 cut(s) 348, 679
AluBI AGCT 5 cut(s) 308, 686, 720, 1220, 1322
AluI AGCT 5 cut(s) 308, 686, 720, 1220, 1322
Alw21I GWGCWC 1 cut(s) 310
AlwI GGATC 5 cut(s) 26, 39, 92, 505, 833
AoxI GGCC 4 cut(s) 176, 706, 1013, 1260
ApeKI GCWGC 5 cut(s) 518, 617, 1127, 1136, 1144
ApoI RAATTY 3 cut(s) 843, 1268, 1346
ArsI GACNNNNNNTTYG 2 cut(s) 198, 230
Asp700I GAANNNNTTC 1 cut(s) 578
AspS9I GGNCC 3 cut(s) 143, 1013, 1203
AsuHPI GGTGA 1 cut(s) 1043
AsuII TTCGAA 1 cut(s) 1311
AvaII GGWCC 2 cut(s) 143, 1203
BaeGI GKGCMC 1 cut(s) 606
BamHI GGATCC 1 cut(s) 31
BanII GRGCYC 1 cut(s) 310
BbsI GAAGAC 1 cut(s) 573
Bbv12I GWGCWC 1 cut(s) 310
BbvI GCAGC 5 cut(s) 530, 604, 1114, 1148, 1156
BccI CCATC 4 cut(s) 128, 155, 203, 1060
BcgI CGANNNNNNTGC 2 cut(s) 1133, 1167
BciT130I CCWGG 2 cut(s) 350, 681
BclI TGATCA 1 cut(s) 1165
BfaI CTAG 3 cut(s) 68, 392, 492
BfmI CTRYAG 1 cut(s) 1134
BglII AGATCT 1 cut(s) 1296
BisI GCNGC 6 cut(s) 166, 519, 618, 1128, 1137, 1145
BlsI GCNGC 6 cut(s) 167, 520, 619, 1129, 1138, 1146
Bme1390I CCNGG 2 cut(s) 350, 681
Bme18I GGWCC 2 cut(s) 143, 1203
BmgT120I GGNCC 3 cut(s) 143, 1013, 1203
BmiI GGNNCC 3 cut(s) 33, 145, 1204
BmrFI CCNGG 2 cut(s) 350, 681
BmsI GCATC 1 cut(s) 1120
BpiI GAAGAC 1 cut(s) 573
BpmI CTGGAG 2 cut(s) 332, 702
Bpu14I TTCGAA 1 cut(s) 1311
BpuEI CTTGAG 1 cut(s) 257
BsaHI GRCGYC 1 cut(s) 322
Bse1I ACTGG 1 cut(s) 407
Bse3DI GCAATG 2 cut(s) 423, 930
BseBI CCWGG 2 cut(s) 350, 681
BseGI GGATG 1 cut(s) 195
BseMI GCAATG 2 cut(s) 423, 930
BseNI ACTGG 1 cut(s) 407
BseSI GKGCMC 1 cut(s) 606
BseXI GCAGC 5 cut(s) 530, 604, 1114, 1148, 1156
Bsh1236I CGCG 1 cut(s) 387
BshFI GGCC 4 cut(s) 178, 708, 1015, 1262
BsiHKAI GWGCWC 1 cut(s) 310
BslFI GGGAC 3 cut(s) 333, 460, 1216
BsmFI GGGAC 3 cut(s) 333, 460, 1216
BsmI GAATGC 3 cut(s) 521, 935, 1113
BsnI GGCC 4 cut(s) 178, 708, 1015, 1262
Bsp119I TTCGAA 1 cut(s) 1311
Bsp1286I GDGCHC 2 cut(s) 310, 606
Bsp1407I TGTACA 1 cut(s) 1301
Bsp68I TCGCGA 1 cut(s) 387
BspACI CCGC 2 cut(s) 166, 1316
BspANI GGCC 4 cut(s) 178, 708, 1015, 1262
BspFNI CGCG 1 cut(s) 387
BspLI GGNNCC 3 cut(s) 33, 145, 1204
BspMAI CTGCAG 1 cut(s) 1138
BspPI GGATC 5 cut(s) 26, 39, 92, 505, 833
BspQI GCTCTTC 1 cut(s) 710
BspT104I TTCGAA 1 cut(s) 1311
BsrDI GCAATG 2 cut(s) 423, 930
BsrGI TGTACA 1 cut(s) 1301
BsrI ACTGG 1 cut(s) 407
BssNI GRCGYC 1 cut(s) 322
Bst2UI CCWGG 2 cut(s) 350, 681
Bst4CI ACNGT 1 cut(s) 805
Bst6I CTCTTC 4 cut(s) 42, 121, 710, 1256
BstACI GRCGYC 1 cut(s) 322
BstAUI TGTACA 1 cut(s) 1301
BstBI TTCGAA 1 cut(s) 1311
BstC8I GCNNGC 6 cut(s) 176, 180, 799, 1121, 1125, 1149
BstDEI CTNAG 2 cut(s) 1077, 1207
BstF5I GGATG 1 cut(s) 195
BstFNI CGCG 1 cut(s) 387
BstMWI GCNNNNNNNGC 5 cut(s) 171, 393, 740, 1133, 1136
BstNI CCWGG 2 cut(s) 350, 681
BstNSI RCATGY 2 cut(s) 212, 382
BstSCI CCNGG 2 cut(s) 348, 679
BstSFI CTRYAG 1 cut(s) 1134
BstSLI GKGCMC 1 cut(s) 606
BstUI CGCG 1 cut(s) 387
BstV1I GCAGC 5 cut(s) 530, 604, 1114, 1148, 1156
BstV2I GAAGAC 1 cut(s) 573
BstX2I RGATCY 2 cut(s) 31, 1296
BstYI RGATCY 2 cut(s) 31, 1296
BsuRI GGCC 4 cut(s) 178, 708, 1015, 1262
BtgZI GCGATG 1 cut(s) 1100
BtsCI GGATG 1 cut(s) 195
BtsIMutI CAGTG 1 cut(s) 801
BtuMI TCGCGA 1 cut(s) 387
Cac8I GCNNGC 6 cut(s) 176, 180, 799, 1121, 1125, 1149
Cfr13I GGNCC 3 cut(s) 143, 1013, 1203
CseI GACGC 1 cut(s) 330
Csp6I GTAC 4 cut(s) 94, 925, 1050, 1302
CviAII CATG 6 cut(s) 209, 379, 508, 535, 571, 820
CviQI GTAC 4 cut(s) 94, 925, 1050, 1302
DdeI CTNAG 2 cut(s) 1077, 1207
DraI TTTAAA 1 cut(s) 1366
DrdI GACNNNNNNGTC 1 cut(s) 478
DseDI GACNNNNNNGTC 1 cut(s) 478
Eam1104I CTCTTC 4 cut(s) 42, 121, 710, 1256
EarI CTCTTC 4 cut(s) 42, 121, 710, 1256
Ecl136II GAGCTC 1 cut(s) 308
Eco24I GRGCYC 1 cut(s) 310
Eco47I GGWCC 2 cut(s) 143, 1203
Eco53kI GAGCTC 1 cut(s) 308
Eco57I CTGAAG 1 cut(s) 695
EcoICRI GAGCTC 1 cut(s) 308
EcoO109I RGGNCCY 1 cut(s) 1203
EcoRI GAATTC 1 cut(s) 843
EcoRII CCWGG 2 cut(s) 348, 679
EcoT22I ATGCAT 1 cut(s) 1113
EcoT38I GRGCYC 1 cut(s) 310
FaeI CATG 6 cut(s) 212, 382, 511, 538, 574, 823
FaqI GGGAC 3 cut(s) 333, 460, 1216
FatI CATG 6 cut(s) 208, 378, 507, 534, 570, 819
FauI CCCGC 1 cut(s) 1309
FauNDI CATATG 2 cut(s) 103, 622
FbaI TGATCA 1 cut(s) 1165
Fnu4HI GCNGC 6 cut(s) 166, 519, 618, 1128, 1137, 1145
FokI GGATG 1 cut(s) 182
FriOI GRGCYC 1 cut(s) 310
Fsp4HI GCNGC 6 cut(s) 166, 519, 618, 1128, 1137, 1145
FspBI CTAG 3 cut(s) 68, 392, 492
GluI GCNGC 6 cut(s) 166, 519, 618, 1128, 1137, 1145
GsuI CTGGAG 2 cut(s) 332, 702
HaeIII GGCC 4 cut(s) 178, 708, 1015, 1262
HgaI GACGC 1 cut(s) 330
Hin1I GRCGYC 1 cut(s) 322
Hin1II CATG 6 cut(s) 212, 382, 511, 538, 574, 823
HindIII AAGCTT 1 cut(s) 1218
HinfI GANTC 4 cut(s) 138, 960, 1285, 1335
HphI GGTGA 1 cut(s) 1043
Hpy166II GTNNAC 3 cut(s) 376, 884, 1304
Hpy188I TCNGA 6 cut(s) 143, 249, 714, 765, 900, 1345
Hpy188III TCNNGA 6 cut(s) 23, 311, 386, 458, 1195, 1201
Hpy8I GTNNAC 3 cut(s) 376, 884, 1304
Hpy99I CGWCG 1 cut(s) 45
HpyAV CCTTC 6 cut(s) 214, 310, 564, 719, 974, 1234
HpyCH4III ACNGT 1 cut(s) 805
HpyCH4V TGCA 9 cut(s) 262, 416, 518, 620, 743, 935, 1111, 1136, 1179
HpyF10VI GCNNNNNNNGC 5 cut(s) 171, 393, 740, 1133, 1136
HpyF3I CTNAG 2 cut(s) 1077, 1207
Hsp92I GRCGYC 1 cut(s) 322
Hsp92II CATG 6 cut(s) 212, 382, 511, 538, 574, 823
Ksp22I TGATCA 1 cut(s) 1165
LguI GCTCTTC 1 cut(s) 710
LmnI GCTCC 3 cut(s) 305, 683, 1319
Lsp1109I GCAGC 5 cut(s) 530, 604, 1114, 1148, 1156
LweI GCATC 1 cut(s) 1120
MaeI CTAG 3 cut(s) 68, 392, 492
MflI RGATCY 2 cut(s) 31, 1296
MhlI GDGCHC 2 cut(s) 310, 606
MluCI AATT 5 cut(s) 417, 675, 843, 1268, 1346
MlyI GAGTC 1 cut(s) 1294
MmeI TCCRAC 1 cut(s) 610
Mph1103I ATGCAT 1 cut(s) 1113
MroXI GAANNNNTTC 1 cut(s) 578
MseI TTAA 8 cut(s) 18, 89, 527, 596, 674, 1043, 1365, 1372
MspR9I CCNGG 2 cut(s) 350, 681
Mva1269I GAATGC 3 cut(s) 521, 935, 1113
MvaI CCWGG 2 cut(s) 350, 681
MvnI CGCG 1 cut(s) 387
MwoI GCNNNNNNNGC 5 cut(s) 171, 393, 740, 1133, 1136
NdeI CATATG 2 cut(s) 103, 622
NlaIII CATG 6 cut(s) 212, 382, 511, 538, 574, 823
NlaIV GGNNCC 3 cut(s) 33, 145, 1204
NruI TCGCGA 1 cut(s) 387
NsiI ATGCAT 1 cut(s) 1113
NspI RCATGY 2 cut(s) 212, 382
NspV TTCGAA 1 cut(s) 1311
PciI ACATGT 2 cut(s) 208, 378
PciSI GCTCTTC 1 cut(s) 710
PctI GAATGC 3 cut(s) 521, 935, 1113
PdmI GAANNNNTTC 1 cut(s) 578
PfeI GAWTC 3 cut(s) 138, 960, 1335
PfoI TCCNGGA 1 cut(s) 679
PkrI GCNGC 6 cut(s) 167, 520, 619, 1129, 1138, 1146
PleI GAGTC 1 cut(s) 1293
PpsI GAGTC 1 cut(s) 1293
PpuMI RGGWCCY 1 cut(s) 1203
PscI ACATGT 2 cut(s) 208, 378
Psp124BI GAGCTC 1 cut(s) 310
Psp5II RGGWCCY 1 cut(s) 1203
Psp6I CCWGG 2 cut(s) 348, 679
PspGI CCWGG 2 cut(s) 348, 679
PspN4I GGNNCC 3 cut(s) 33, 145, 1204
PspPI GGNCC 3 cut(s) 143, 1013, 1203
PspPPI RGGWCCY 1 cut(s) 1203
PstI CTGCAG 1 cut(s) 1138
PsuI RGATCY 2 cut(s) 31, 1296
RruI TCGCGA 1 cut(s) 387
RsaI GTAC 4 cut(s) 95, 926, 1051, 1303
RsaNI GTAC 4 cut(s) 94, 925, 1050, 1302
SacI GAGCTC 1 cut(s) 310
SapI GCTCTTC 1 cut(s) 710
SaqAI TTAA 8 cut(s) 18, 89, 527, 596, 674, 1043, 1365, 1372
SatI GCNGC 6 cut(s) 166, 519, 618, 1128, 1137, 1145
Sau96I GGNCC 3 cut(s) 143, 1013, 1203
SchI GAGTC 1 cut(s) 1294
ScrFI CCNGG 2 cut(s) 350, 681
SduI GDGCHC 2 cut(s) 310, 606
SfaNI GCATC 1 cut(s) 1120
SfcI CTRYAG 1 cut(s) 1134
SfuI TTCGAA 1 cut(s) 1311
SinI GGWCC 2 cut(s) 143, 1203
SmlI CTYRAG 1 cut(s) 272
SmoI CTYRAG 1 cut(s) 272
Sse9I AATT 5 cut(s) 417, 675, 843, 1268, 1346
SsiI CCGC 2 cut(s) 166, 1316
SspI AATATT 1 cut(s) 1041
SspMI CTAG 3 cut(s) 68, 392, 492
SstI GAGCTC 1 cut(s) 310
StyD4I CCNGG 2 cut(s) 348, 679
TaaI ACNGT 1 cut(s) 805
TaqI TCGA 4 cut(s) 43, 409, 582, 1311
TasI AATT 5 cut(s) 417, 675, 843, 1268, 1346
TatI WGTACW 2 cut(s) 924, 1301
TauI GCSGC 1 cut(s) 168
TfiI GAWTC 3 cut(s) 138, 960, 1335
Tru1I TTAA 8 cut(s) 18, 89, 527, 596, 674, 1043, 1365, 1372
Tru9I TTAA 8 cut(s) 18, 89, 527, 596, 674, 1043, 1365, 1372
TscAI CASTG 1 cut(s) 808
TseI GCWGC 5 cut(s) 518, 617, 1127, 1136, 1144
TspDTI ATGAA 5 cut(s) 257, 325, 523, 587, 1216
TspGWI ACGGA 1 cut(s) 869
TspRI CASTG 1 cut(s) 808
VpaK11BI GGWCC 2 cut(s) 143, 1203
XapI RAATTY 3 cut(s) 843, 1268, 1346
XceI RCATGY 2 cut(s) 212, 382
XcmI CCANNNNNNNNNTGG 1 cut(s) 299
XmnI GAANNNNTTC 1 cut(s) 578
XspI CTAG 3 cut(s) 68, 392, 492
Zsp2I ATGCAT 1 cut(s) 1113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.