Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000218.1

Orthogroup ID

OG0000287

Physical Location & Seq

Genomic Coordinates Forward (+)

218200 .. 224959

Gene Structure 6760 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000218.1_g000052.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

atggcttcaattacatctcattctaatgttaagcttattagtgcaattcatgaaagtgaaaatggttaccatcccagtagtcccacagcagttgcggaggttgaaacagttgctaaaggagatgccgcagtgaaggaagactccattcaaaaccgaaaccatataaaggttccactaatcgaaaatgatgagggtcttttcttgacatgggaagatttgtgggtgagagtagcctcaaatttaaatgagggagaaaagcatagtagtgatggaagaagctgcagatcaatcctccgaggggtaactggttatgccaaaccagggcaactcttggctataatgggtccttctggttgtggcaaatctactcttcttgatgcattagcaggtagattgagttcaaacacaaggcaaacaggggatatccgtataaatggacataaacaagcactagcgtatggaacttcggcatatgtaacacaagatgacactctaatgaccacattaacggtgaaagaagctgtacactactctgctcaactgcggctaccagagtcaatgtctaagtcaaagaagaaagagagagcacaagtgaccataagagagatgggtttgcaaaatgccatgaacacgaggatcggaggttggggagccaagggcctcagtggtggcgaaaggagaagactgagtatctgcattgagcttcttacacaaccaaaacttctctttctggatgaaccaacaagcggacttgacagtgctgcgtctttttatgtcatgagcagaattgcaaatcttggtcataaatcgtctcagaggaccatagttgcttccatccatcagcctagctctgaagtctttcaactctttgacaatctttgtcttctgtcttccggcgaaactgtatattttggtcctgcttctgcagcgaatgaagcacgaggctctctactagcatttgtggcttcgtttctaactttcatggccattggtgggtttccttcctttgtggaagacatgaaggtatttgaacgtgaaagactgaacgggcactatggtgttagtgcatttgttttcgccaacacattttcttcaatgcctttgttaatgttgatttcactgattcctggcgcaacaacctactatcttgctggacttcacaatggatttgaacacttcttctactttgcttctgctctatttgcctgcatgatgctggttgagagcctaatgatgatagttgcgagcatcgtgccgaatttccttatgggcataatagttggttctggattgcaagggattatgttgttatgcggcggattcttccggctaccaaatgatcttccggatcttgtgtggaaatacccattgtaccatattgccttccacaagtatgcattccagggaatgtttaagaatgaatttgaaggaacaacgtttccgaatgatgatcaacttagaatcggtaactctaagtggcttactggcgacagcattttgagagatatatggcaggtggaaatgggttattctaaatgggttgatcttgttgtcttgctaggaatgatagttctgtatcgagctttgttcttggttatcatcaagatcactgagaaaaggaagactattaccttagctcttctgcccatggctccgaagcaaagcatgcaagtattggtgaatcccaagagagccagcagaatcgtaacaacgtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005319 GO:0005342 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006950 GO:0006970 GO:0007275 GO:0007389 GO:0008028 GO:0008150 GO:0008509 GO:0008514 GO:0009611 GO:0009628 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0009897 GO:0009965 GO:0009986 GO:0010016 GO:0010033 GO:0010051 GO:0010154 GO:0010222 GO:0010588 GO:0010876 GO:0015075 GO:0015245 GO:0015318 GO:0015399 GO:0015405 GO:0015711 GO:0015718 GO:0015849 GO:0015908 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0022804 GO:0022857 GO:0031224 GO:0032501 GO:0032502 GO:0033036 GO:0033993 GO:0034220 GO:0042221 GO:0042623 GO:0042626 GO:0042802 GO:0042803 GO:0043492 GO:0044425 GO:0044459 GO:0044464 GO:0046942 GO:0046943 GO:0046983 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071702 GO:0071944 GO:0080051 GO:0090698 GO:0097305 GO:0098552 GO:0098656 GO:0099402 GO:1901700 GO:1903825 GO:1905039 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

571

Amino Acids

62.9

Weight (kDa)

8.7

Isoelectric Point (pI)

40.15

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000287)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20410 FvH4_1g20410 FvH4_6g39250 FvH4_6g39250
malus_domestica	MD00G1036800.v1.1 MD05G1042600.v1.1 MD10G1049900.v1.1
prunus_persica	Prupe.6G191500_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064400_v2.0.a1
pyrus_communis	pycom05g03520 pycom10g03500 pycom10g03510 pycom15g28250
rosa_chinensis	RchiOBHm_Chr1g0336561 RchiOBHm_Chr2g0112551 RchiOBHm_Chr2g0112561 RchiOBHm_Chr2g0112631 RchiOBHm_Chr2g0112641 RchiOBHm_Chr2g0153091 RchiOBHm_Chr2g0153111 RchiOBHm_Chr2g0153141 RchiOBHm_Chr2g0153161 RchiOBHm_Chr2g0153171
rosa_laevigata	RLG00000017991 RLG00000017992 RLG00000017995 RLG00000017997 RLG00000020676 RLG00000020677 RLG00000020678 RLG00000020682
rosa_multiflora	Rmu_co8208234.1_g000001 Rmu_co8218328.1_g000001 Rmu_co8425243.1_g000001 Rmu_sc0000218.1_g000037 Rmu_sc0000218.1_g000044 Rmu_sc0000218.1_g000047 Rmu_sc0000218.1_g000052 Rmu_sc0001155.1_g000011 Rmu_sc0001155.1_g000026 Rmu_sc0001155.1_g000029 Rmu_sc0001499.1_g000001 Rmu_sc0001499.1_g000040 Rmu_sc0002401.1_g000032 Rmu_sc0002401.1_g000033 Rmu_sc0004070.1_g000003 Rmu_sc0004070.1_g000004 Rmu_sc0005547.1_g000001 Rmu_sc0006062.1_g000002 Rmu_sc0009780.1_g000005 Rmu_sc0013071.1_g000001 Rmu_sc0013071.1_g000012
rosa_roxburghii	Rroxscaffold_2G00095130 Rroxscaffold_2G00095140 Rroxscaffold_2G00095160 Rroxscaffold_2G00095180 Rroxscaffold_2G00095190 Rroxscaffold_2G00095200 Rroxscaffold_2G00131290 Rroxscaffold_2G00131320 Rroxscaffold_2G00131350
rosa_rugosa	Rorug02G0181500 Rorug02G0181500 Rorug02G0181600 Rorug02G0181700 Rorug02G0437300 Rorug02G0437400
rosa_samantha	Rh1DG154100 Rh2AG235200 Rh2AG235300 Rh2AG235400 Rh2AG235600 Rh2AG235800 Rh2AG499700 Rh2AG499800 Rh2AG500000 Rh2AG500100 Rh2AG500200 Rh2BG248500 Rh2BG248700 Rh2BG248800 Rh2BG511000 Rh2BG511200 Rh2BG511300 Rh2BG511600 Rh2CG239600 Rh2CG239700 Rh2CG239900 Rh2CG240000 Rh2CG485900 Rh2CG486000 Rh2CG486200 Rh2CG486300 Rh2CG486400 Rh2DG242500 Rh2DG242600 Rh2DG242700 Rh2DG242900 Rh2DG243100 Rh2DG522800 Rh2DG523100 Rh2DG523200 Rh2DG523500 Rh2DG523600 Rh5DG200200
rosa_wichuraiana	Rw2G018200 Rw2G018210 Rw2G018230 Rw2G018240 Rw2G041010 Rw2G041020 Rw2G041030 Rw2G041050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1504
Acc36I	ACCTGC	2 cut(s)	377, 1504
AccIII	TCCGGA	1 cut(s)	1345
AciI	CCGC	6 cut(s)	95, 126, 544, 747, 1314, 1317
AclI	AACGTT	1 cut(s)	1436
AclWI	GGATC	2 cut(s)	644, 1356
AcoI	YGGCCR	1 cut(s)	984
AcsI	RAATTY	3 cut(s)	238, 1258, 1421
AcuI	CTGAAG	1 cut(s)	873
AfaI	GTAC	2 cut(s)	525, 1373
AfiI	CCNNNNNNNGG	5 cut(s)	166, 298, 321, 746, 993
AgsI	TTSAA	9 cut(s)	9, 104, 149, 402, 863, 1031, 1095, 1172, 1427
AjnI	CCWGG	3 cut(s)	319, 1126, 1401
AleI	CACNNNNGTG	1 cut(s)	1056
AloI	GAACNNNNNNTCC	4 cut(s)	1423, 1455, 1554, 1586
AluBI	AGCT	7 cut(s)	34, 279, 521, 703, 849, 1583, 1637
AluI	AGCT	7 cut(s)	34, 279, 521, 703, 849, 1583, 1637
Alw21I	GWGCWC	1 cut(s)	589
Alw26I	GTCTC	1 cut(s)	816
AlwI	GGATC	2 cut(s)	644, 1356
Aor13HI	TCCGGA	1 cut(s)	1345
AoxI	GGCC	2 cut(s)	658, 984
ApeKI	GCWGC	3 cut(s)	279, 761, 926
ApoI	RAATTY	3 cut(s)	238, 1258, 1421
Asp700I	GAANNNNTTC	1 cut(s)	858
AspLEI	GCGC	1 cut(s)	1133
AspS9I	GGNCC	4 cut(s)	344, 658, 819, 914
AsuHPI	GGTGA	3 cut(s)	235, 523, 1690
AvaII	GGWCC	3 cut(s)	344, 819, 914
BaeGI	GKGCMC	1 cut(s)	1053
BalI	TGGCCA	1 cut(s)	986
BauI	CACGAG	2 cut(s)	631, 939
BbsI	GAAGAC	6 cut(s)	144, 688, 875, 882, 1020, 1628
Bbv12I	GWGCWC	1 cut(s)	589
BbvI	GCAGC	3 cut(s)	266, 748, 938
BccI	CCATC	5 cut(s)	78, 263, 601, 842, 846
BcgI	CGANNNNNNTGC	2 cut(s)	1234, 1268
BciT130I	CCWGG	3 cut(s)	321, 1128, 1403
BclI	TGATCA	1 cut(s)	1450
BcoDI	GTCTC	1 cut(s)	816
BfaI	CTAG	4 cut(s)	452, 846, 953, 1559
BfmI	CTRYAG	2 cut(s)	280, 924
BfuAI	ACCTGC	2 cut(s)	377, 1504
BisI	GCNGC	6 cut(s)	126, 280, 545, 762, 927, 1315
BlsI	GCNGC	6 cut(s)	127, 281, 546, 763, 928, 1316
Bme1390I	CCNGG	3 cut(s)	321, 1128, 1403
Bme18I	GGWCC	3 cut(s)	344, 819, 914
BmgT120I	GGNCC	4 cut(s)	344, 658, 819, 914
BmiI	GGNNCC	4 cut(s)	171, 345, 652, 1653
BmrFI	CCNGG	3 cut(s)	321, 1128, 1403
BmrI	ACTGGG	1 cut(s)	69
BmsI	GCATC	4 cut(s)	112, 367, 1203, 1257
BmuI	ACTGGG	1 cut(s)	69
BpiI	GAAGAC	6 cut(s)	144, 688, 875, 882, 1020, 1628
Bpu10I	CCTNAGC	1 cut(s)	1633
BsaJI	CCNNGG	5 cut(s)	295, 320, 654, 1402, 1647
BsaWI	WCCGGW	1 cut(s)	1345
Bsc4I	CCNNNNNNNGG	5 cut(s)	166, 298, 321, 746, 993
Bse1I	ACTGG	3 cut(s)	75, 310, 1489
BseAI	TCCGGA	1 cut(s)	1345
BseBI	CCWGG	3 cut(s)	321, 1128, 1403
BseDI	CCNNGG	5 cut(s)	295, 320, 654, 1402, 1647
BseGI	GGATG	3 cut(s)	70, 739, 834
BseLI	CCNNNNNNNGG	5 cut(s)	166, 298, 321, 746, 993
BseMII	CTCAG	4 cut(s)	676, 677, 827, 1602
BseNI	ACTGG	3 cut(s)	75, 310, 1489
BseSI	GKGCMC	1 cut(s)	1053
BseXI	GCAGC	3 cut(s)	266, 748, 938
BshFI	GGCC	2 cut(s)	660, 986
BsiHKAI	GWGCWC	1 cut(s)	589
BsiSI	CCGG	3 cut(s)	894, 1327, 1346
BslFI	GGGAC	1 cut(s)	66
BslI	CCNNNNNNNGG	5 cut(s)	166, 298, 321, 746, 993
BsmAI	GTCTC	1 cut(s)	816
BsmBI	CGTCTC	1 cut(s)	816
BsmFI	GGGAC	1 cut(s)	66
BsmI	GAATGC	1 cut(s)	1397
BsnI	GGCC	2 cut(s)	660, 986
Bsp1286I	GDGCHC	2 cut(s)	589, 1053
Bsp13I	TCCGGA	1 cut(s)	1345
Bsp1407I	TGTACA	1 cut(s)	523
Bsp143I	GATC	7 cut(s)	284, 636, 1339, 1348, 1450, 1543, 1605
Bsp19I	CCATGG	1 cut(s)	1647
BspACI	CCGC	6 cut(s)	95, 126, 544, 747, 1314, 1317
BspANI	GGCC	2 cut(s)	660, 986
BspCNI	CTCAG	4 cut(s)	675, 678, 826, 1603
BspEI	TCCGGA	1 cut(s)	1345
BspHI	TCATGA	2 cut(s)	49, 777
BspLI	GGNNCC	4 cut(s)	171, 345, 652, 1653
BspMAI	CTGCAG	2 cut(s)	284, 928
BspMI	ACCTGC	2 cut(s)	377, 1504
BspPI	GGATC	2 cut(s)	644, 1356
BspQI	GCTCTTC	1 cut(s)	1644
BsrGI	TGTACA	1 cut(s)	523
BsrI	ACTGG	3 cut(s)	75, 310, 1489
BssECI	CCNNGG	5 cut(s)	295, 320, 654, 1402, 1647
BssMI	GATC	7 cut(s)	284, 636, 1339, 1348, 1450, 1543, 1605
BssSI	CACGAG	2 cut(s)	631, 939
BssT1I	CCWWGG	2 cut(s)	654, 1647
Bst2BI	CACGAG	2 cut(s)	631, 939
Bst2UI	CCWGG	3 cut(s)	321, 1128, 1403
Bst4CI	ACNGT	4 cut(s)	109, 511, 758, 904
Bst6I	CTCTTC	2 cut(s)	375, 1644
BstAPI	GCANNNNNTGC	1 cut(s)	1666
BstAUI	TGTACA	1 cut(s)	523
BstC8I	GCNNGC	4 cut(s)	1207, 1246, 1667, 1696
BstDEI	CTNAG	8 cut(s)	564, 662, 686, 813, 1457, 1473, 1611, 1633
BstDSI	CCRYGG	1 cut(s)	1647
BstEII	GGTNACC	1 cut(s)	65
BstF5I	GGATG	3 cut(s)	70, 739, 834
BstHHI	GCGC	1 cut(s)	1133
BstKTI	GATC	7 cut(s)	287, 639, 1342, 1351, 1453, 1546, 1608
BstMAI	GTCTC	1 cut(s)	816
BstMBI	GATC	7 cut(s)	284, 636, 1339, 1348, 1450, 1543, 1605
BstMWI	GCNNNNNNNGC	5 cut(s)	926, 935, 962, 1202, 1666
BstNI	CCWGG	3 cut(s)	321, 1128, 1403
BstNSI	RCATGY	1 cut(s)	1669
BstPI	GGTNACC	1 cut(s)	65
BstSCI	CCNGG	3 cut(s)	319, 1126, 1401
BstSFI	CTRYAG	2 cut(s)	280, 924
BstSLI	GKGCMC	1 cut(s)	1053
BstV1I	GCAGC	3 cut(s)	266, 748, 938
BstV2I	GAAGAC	6 cut(s)	144, 688, 875, 882, 1020, 1628
BstX2I	RGATCY	1 cut(s)	1348
BstYI	RGATCY	1 cut(s)	1348
BsuRI	GGCC	2 cut(s)	660, 986
BtgI	CCRYGG	1 cut(s)	1647
BtsCI	GGATG	3 cut(s)	70, 739, 834
BtsI	GCAGTG	1 cut(s)	135
BtsIMutI	CAGTG	5 cut(s)	135, 670, 763, 1118, 1608
BveI	ACCTGC	2 cut(s)	377, 1504
Cac8I	GCNNGC	4 cut(s)	1207, 1246, 1667, 1696
CciI	TCATGA	2 cut(s)	49, 777
CfoI	GCGC	1 cut(s)	1133
Cfr13I	GGNCC	4 cut(s)	344, 658, 819, 914
CseI	GACGC	1 cut(s)	753
Csp6I	GTAC	2 cut(s)	524, 1372
CspCI	CAANNNNNGTGG	2 cut(s)	73, 108
CviAII	CATG	9 cut(s)	50, 207, 625, 778, 982, 1018, 1210, 1648, 1666
CviQI	GTAC	2 cut(s)	524, 1372
DdeI	CTNAG	8 cut(s)	564, 662, 686, 813, 1457, 1473, 1611, 1633
DpnI	GATC	7 cut(s)	286, 638, 1341, 1350, 1452, 1545, 1607
DpnII	GATC	7 cut(s)	284, 636, 1339, 1348, 1450, 1543, 1605
DraI	TTTAAA	1 cut(s)	243
EaeI	YGGCCR	1 cut(s)	984
Eam1104I	CTCTTC	2 cut(s)	375, 1644
EarI	CTCTTC	2 cut(s)	375, 1644
EciI	GGCGGA	1 cut(s)	1332
Eco130I	CCWWGG	2 cut(s)	654, 1647
Eco32I	GATATC	1 cut(s)	424
Eco47I	GGWCC	3 cut(s)	344, 819, 914
Eco57I	CTGAAG	1 cut(s)	873
Eco91I	GGTNACC	1 cut(s)	65
EcoO109I	RGGNCCY	2 cut(s)	344, 658
EcoO65I	GGTNACC	1 cut(s)	65
EcoRII	CCWGG	3 cut(s)	319, 1126, 1401
EcoRV	GATATC	1 cut(s)	424
EcoT14I	CCWWGG	2 cut(s)	654, 1647
EcoT22I	ATGCAT	2 cut(s)	382, 1399
ErhI	CCWWGG	2 cut(s)	654, 1647
Esp3I	CGTCTC	1 cut(s)	816
FaeI	CATG	9 cut(s)	53, 210, 628, 781, 985, 1021, 1213, 1651, 1669
FaqI	GGGAC	1 cut(s)	66
FatI	CATG	9 cut(s)	49, 206, 624, 777, 981, 1017, 1209, 1647, 1665
FauNDI	CATATG	1 cut(s)	472
FbaI	TGATCA	1 cut(s)	1450
Fnu4HI	GCNGC	6 cut(s)	126, 280, 545, 762, 927, 1315
FokI	GGATG	3 cut(s)	57, 746, 821
Fsp4HI	GCNGC	6 cut(s)	126, 280, 545, 762, 927, 1315
FspBI	CTAG	4 cut(s)	452, 846, 953, 1559
GlaI	GCGC	1 cut(s)	1132
GluI	GCNGC	6 cut(s)	126, 280, 545, 762, 927, 1315
HaeIII	GGCC	2 cut(s)	660, 986
HapII	CCGG	3 cut(s)	894, 1327, 1346
HgaI	GACGC	1 cut(s)	753
HhaI	GCGC	1 cut(s)	1133
Hin1II	CATG	9 cut(s)	53, 210, 628, 781, 985, 1021, 1213, 1651, 1669
Hin6I	GCGC	1 cut(s)	1131
HinP1I	GCGC	1 cut(s)	1131
HindIII	AAGCTT	1 cut(s)	32
HinfI	GANTC	7 cut(s)	140, 554, 1123, 1320, 1461, 1681, 1701
HpaII	CCGG	3 cut(s)	894, 1327, 1346
HphI	GGTGA	3 cut(s)	235, 523, 1690
Hpy166II	GTNNAC	1 cut(s)	526
Hpy188I	TCNGA	6 cut(s)	296, 641, 816, 853, 1443, 1656
Hpy188III	TCNNGA	8 cut(s)	50, 202, 374, 731, 778, 1287, 1346, 1603
Hpy8I	GTNNAC	1 cut(s)	526
HpyAV	CCTTC	6 cut(s)	127, 357, 1011, 1015, 1393, 1421
HpyCH4III	ACNGT	4 cut(s)	109, 511, 758, 904
HpyCH4IV	ACGT	3 cut(s)	1033, 1436, 1712
HpyF10VI	GCNNNNNNNGC	5 cut(s)	926, 935, 962, 1202, 1666
HpyF3I	CTNAG	8 cut(s)	564, 662, 686, 813, 1457, 1473, 1611, 1633
HpySE526I	ACGT	3 cut(s)	1033, 1436, 1712
Hsp92II	CATG	9 cut(s)	53, 210, 628, 781, 985, 1021, 1213, 1651, 1669
HspAI	GCGC	1 cut(s)	1131
Kpn2I	TCCGGA	1 cut(s)	1345
Ksp22I	TGATCA	1 cut(s)	1450
Kzo9I	GATC	7 cut(s)	284, 636, 1339, 1348, 1450, 1543, 1605
LguI	GCTCTTC	1 cut(s)	1644
LmnI	GCTCC	2 cut(s)	650, 1657
Lsp1109I	GCAGC	3 cut(s)	266, 748, 938
LweI	GCATC	4 cut(s)	112, 367, 1203, 1257
MaeI	CTAG	4 cut(s)	452, 846, 953, 1559
MaeII	ACGT	3 cut(s)	1033, 1436, 1712
MaeIII	GTNAC	6 cut(s)	65, 301, 475, 592, 1466, 1705
MalI	GATC	7 cut(s)	286, 638, 1341, 1350, 1452, 1545, 1607
MboI	GATC	7 cut(s)	284, 636, 1339, 1348, 1450, 1543, 1605
MflI	RGATCY	1 cut(s)	1348
MhlI	GDGCHC	2 cut(s)	589, 1053
MlsI	TGGCCA	1 cut(s)	986
MluCI	AATT	6 cut(s)	9, 45, 238, 786, 1258, 1421
MluNI	TGGCCA	1 cut(s)	986
MlyI	GAGTC	2 cut(s)	134, 563
Mox20I	TGGCCA	1 cut(s)	986
Mph1103I	ATGCAT	2 cut(s)	382, 1399
MroI	TCCGGA	1 cut(s)	1345
MroXI	GAANNNNTTC	1 cut(s)	858
MscI	TGGCCA	1 cut(s)	986
MseI	TTAA	5 cut(s)	30, 242, 506, 1106, 1413
MslI	CAYNNNNRTG	6 cut(s)	24, 54, 264, 494, 1056, 1392
Msp20I	TGGCCA	1 cut(s)	986
MspI	CCGG	3 cut(s)	894, 1327, 1346
MspR9I	CCNGG	3 cut(s)	321, 1128, 1403
Mva1269I	GAATGC	1 cut(s)	1397
MvaI	CCWGG	3 cut(s)	321, 1128, 1403
MwoI	GCNNNNNNNGC	5 cut(s)	926, 935, 962, 1202, 1666
NcoI	CCATGG	1 cut(s)	1647
NdeI	CATATG	1 cut(s)	472
NdeII	GATC	7 cut(s)	284, 636, 1339, 1348, 1450, 1543, 1605
NlaIII	CATG	9 cut(s)	53, 210, 628, 781, 985, 1021, 1213, 1651, 1669
NlaIV	GGNNCC	4 cut(s)	171, 345, 652, 1653
NmuCI	GTSAC	1 cut(s)	592
NsiI	ATGCAT	2 cut(s)	382, 1399
NspI	RCATGY	1 cut(s)	1669
OliI	CACNNNNGTG	1 cut(s)	1056
PaeI	GCATGC	1 cut(s)	1669
PagI	TCATGA	2 cut(s)	49, 777
PaqCI	CACCTGC	1 cut(s)	1504
PciSI	GCTCTTC	1 cut(s)	1644
PctI	GAATGC	1 cut(s)	1397
PdmI	GAANNNNTTC	1 cut(s)	858
PfeI	GAWTC	5 cut(s)	1123, 1320, 1461, 1681, 1701
PkrI	GCNGC	6 cut(s)	127, 281, 546, 763, 928, 1316
PleI	GAGTC	2 cut(s)	134, 562
PpsI	GAGTC	2 cut(s)	134, 562
PpuMI	RGGWCCY	1 cut(s)	344
Psp1406I	AACGTT	1 cut(s)	1436
Psp5II	RGGWCCY	1 cut(s)	344
Psp6I	CCWGG	3 cut(s)	319, 1126, 1401
PspEI	GGTNACC	1 cut(s)	65
PspGI	CCWGG	3 cut(s)	319, 1126, 1401
PspN4I	GGNNCC	4 cut(s)	171, 345, 652, 1653
PspPI	GGNCC	4 cut(s)	344, 658, 819, 914
PspPPI	RGGWCCY	1 cut(s)	344
PsrI	GAACNNNNNNTAC	2 cut(s)	382, 414
PstI	CTGCAG	2 cut(s)	284, 928
PsuI	RGATCY	1 cut(s)	1348
RsaI	GTAC	2 cut(s)	525, 1373
RsaNI	GTAC	2 cut(s)	524, 1372
RseI	CAYNNNNRTG	6 cut(s)	24, 54, 264, 494, 1056, 1392
SapI	GCTCTTC	1 cut(s)	1644
SaqAI	TTAA	5 cut(s)	30, 242, 506, 1106, 1413
SatI	GCNGC	6 cut(s)	126, 280, 545, 762, 927, 1315
Sau3AI	GATC	7 cut(s)	284, 636, 1339, 1348, 1450, 1543, 1605
Sau96I	GGNCC	4 cut(s)	344, 658, 819, 914
SchI	GAGTC	2 cut(s)	134, 563
ScrFI	CCNGG	3 cut(s)	321, 1128, 1403
SduI	GDGCHC	2 cut(s)	589, 1053
SfaNI	GCATC	4 cut(s)	112, 367, 1203, 1257
SfcI	CTRYAG	2 cut(s)	280, 924
SinI	GGWCC	3 cut(s)	344, 819, 914
SmiI	ATTTAAAT	1 cut(s)	243
SmiMI	CAYNNNNRTG	6 cut(s)	24, 54, 264, 494, 1056, 1392
SphI	GCATGC	1 cut(s)	1669
Sse9I	AATT	6 cut(s)	9, 45, 238, 786, 1258, 1421
SsiI	CCGC	6 cut(s)	95, 126, 544, 747, 1314, 1317
SspMI	CTAG	4 cut(s)	452, 846, 953, 1559
StyD4I	CCNGG	3 cut(s)	319, 1126, 1401
StyI	CCWWGG	2 cut(s)	654, 1647
SwaI	ATTTAAAT	1 cut(s)	243
TaaI	ACNGT	4 cut(s)	109, 511, 758, 904
TaiI	ACGT	3 cut(s)	1036, 1439, 1715
TaqI	TCGA	2 cut(s)	180, 1579
TasI	AATT	6 cut(s)	9, 45, 238, 786, 1258, 1421
TatI	WGTACW	1 cut(s)	523
TauI	GCSGC	3 cut(s)	128, 547, 1317
TfiI	GAWTC	5 cut(s)	1123, 1320, 1461, 1681, 1701
Tru1I	TTAA	5 cut(s)	30, 242, 506, 1106, 1413
Tru9I	TTAA	5 cut(s)	30, 242, 506, 1106, 1413
TscAI	CASTG	5 cut(s)	135, 670, 763, 1125, 1615
TseFI	GTSAC	1 cut(s)	592
TseI	GCWGC	3 cut(s)	279, 761, 926
Tsp45I	GTSAC	1 cut(s)	592
TspDTI	ATGAA	8 cut(s)	38, 66, 641, 750, 948, 970, 1034, 1434
TspGWI	ACGGA	1 cut(s)	416
TspRI	CASTG	5 cut(s)	135, 670, 763, 1125, 1615
VpaK11BI	GGWCC	3 cut(s)	344, 819, 914
XapI	RAATTY	3 cut(s)	238, 1258, 1421
XceI	RCATGY	1 cut(s)	1669
XcmI	CCANNNNNNNNNTGG	1 cut(s)	604
XmnI	GAANNNNTTC	1 cut(s)	858
XspI	CTAG	4 cut(s)	452, 846, 953, 1559
Zsp2I	ATGCAT	2 cut(s)	382, 1399

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.