Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0000287

Physical Location & Seq

Genomic Coordinates Forward (+)

23228284 .. 23255132

Gene Structure 26849 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G018210.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2226 bp

ATGAAAAAACACTTGAAAAGCTATAAATATAGTTTGGTGATCGAGTACGTAGAATATATATATAGCGCATTAATTGATAACACACTGCAGCTTTTACCCTTCACCCAAGAAACTCAGAAAGCCATTTCCATGGAGTCTTCTTCTCCAGATAACTTTCCAAGATGGGCACCAAGTCCAAGCCCCTCGAGAGTATTACTATCACCTGTGGAAGACACCAAGATCAAGTCGAATGCTGCTCCTGATTCTGCAGAGAATGGCTTATCCTTATCATGTTCTAGCATGGAAAGGATTTTCCCATTTAGCATTGGATTCAAAAGCACTGCTACTACTAGTACTGCTTATCCTTCTGCGGTTGAAAAGTTACTAGAAGCTGAATGTGCTTACGTTAAAAGCAGTGGTACTACTGATATTGAAATTGCATCAAGAAAGAATGGTATTTCTTTGACATGGGAGGACTTGTGGGTTGGAGTAGCAGATCGGAAAAGGGAGCAGCGAATGATTTTGCAGAAGCTTACCGGGTTTGCTCAACCTGGTGAGGTTTTGGCTATTATGGGTCCTTCTGGCTGTGGTAAATCAACCCTTTTGGATGCTTTGGCAGGAAGGCTAAGTTCAAGCACACAGCACAGAGGGAAGATCCTAATCAATGGCCGGAAAGAAACACTTGCCTACGGAACCTCGGCATATGTGACTCAAGATGACACACTAATGACAACATTAACAGTAAGGGAAGTTGTGTATTACTCGGCTCAGCTCCAACTACCAGAAAAGAAGGAAAGAGCTGAGACAACAATAAGGGAGATGGGCTTGCAAGACTCCATGAACACAAGAATTGGAGGTTGGAGTAAAAAAGGCCTCAGTGGTGGGCAAAAGAGAAGAGTCAGCATCTGCGTTGAAATCTTAACTCCATATTACCATGTCATGAACCGCATTATTAAACTGGCTCACCGCGATGGAATGACAGTTATTGCATCAATTCATCAACCAAGCGGTGAAGTTTTTGAGCTTTTCCAAAATCTTTGCCTTCTCTCCTCTGGTAGAACAGTCTATTTTGGCCCTGCTTCACAGGCAGAACAGTTTTTTGCTTCAAATGGCTTCCTGTGTCCAACGCTGAGAAACCCATCAGATCACTACCTTAGGACTATCAACAAGGACTTTGATGTTGACAATGAACAAGGGCTTGATGGAAAAACAAGCACCGAGGAGGCAATCAATATTCTCATAGGATCATACAAGTCTTCAAGTACTTTAAAGCAAGTTCAGCACAATGTAACTGAGATTTGCCAACAGAAAGGTGGAGCTCTAGAGAAGGGAAGCCAGACCAACTTCATAACTCAATGCCTAGTTCTGACAAGGAGATCATTTGTGAACATGTATCGAGATCTAGGCTACTACTGGCTTCGTCTTGCAATTTACATTTCCTTGTGCTTATGTGTAGGGACTATTTTTCATCACATTGGCTCCAATTTTGGCTCAATACAGGCTAGAGGATCAATGCCCATGTTTGTTTCAGGATTCTTGACTTTCATGGCAATAGGTGGATTCCCTTCTTTCGTAGAAGACATGAAGATCTTTGAGCGAGAAAGGTTAAATGGGCACTACAGAGCTGCCGCATTTGTTGTTGGAAACACATTTTCCTCCATTCCATACTTACTCATGATCTCTTTAATTCCTGGAGCAATAGCCTATTACCTTGTTGGCCTTCAGAAGAGCTGTGATCACTTCGCCTATTTTGCATTGGTTATGTTTGTGTGTCTGATGTTGGTTGAGAGCCTAATGATGATTGTAGCAAGCATTGTCCCGGACTTCCTCATGGGGATTATCACAGGTGCGGGAATTCAAGGAGTGATGATCTTGAATGGAGGTTTCTTCCAAAAACCTGACTATCTTCCGAAGCCCTTCTGGAGATACCCAATGTACTATATTGGATTCCACAAGTATTCAAATCAAGGTTACTACAAGAATGAGTTTATAGGACTAACATTCCCCTATAATCAAGAAGGGGAAGGCATCATTACTGGTGAAGATATATTGAAAAATATTTGGCAAGTGGAGTTGGGCTATTCTAAGTGGGTTGATCTATCGATTTTGTTTGGAATGGTAGTTGTTTACAGGCTCATGTTTTTGGGAATCATAAAGTTTAGTGAAAAGGCTGTGCCAATCATCAAAGCTCTTCTTGTCGGTGTTCCCAAAGACTCTGAAGCGTTCACGGATAACCCATCCTCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005319 GO:0005342 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006950 GO:0006970 GO:0007275 GO:0007389 GO:0008028 GO:0008150 GO:0008509 GO:0008514 GO:0009611 GO:0009628 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0009897 GO:0009965 GO:0009986 GO:0010016 GO:0010033 GO:0010051 GO:0010154 GO:0010222 GO:0010588 GO:0010876 GO:0015075 GO:0015245 GO:0015318 GO:0015399 GO:0015405 GO:0015711 GO:0015718 GO:0015849 GO:0015908 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0022804 GO:0022857 GO:0031224 GO:0032501 GO:0032502 GO:0033036 GO:0033993 GO:0034220 GO:0042221 GO:0042623 GO:0042626 GO:0042802 GO:0042803 GO:0043492 GO:0044425 GO:0044459 GO:0044464 GO:0046942 GO:0046943 GO:0046983 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071702 GO:0071944 GO:0080051 GO:0090698 GO:0097305 GO:0098552 GO:0098656 GO:0099402 GO:1901700 GO:1903825 GO:1905039 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

741

Amino Acids

82.69

Weight (kDa)

8.38

Isoelectric Point (pI)

38.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	173 - 301	1.5e-21	ABC transporter
ABC2_membrane_7	PF19055	326 - 383	3.6e-09	ABC-2 type transporter
ABC2_membrane	PF01061	444 - 656	3.5e-40	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000287)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20410 FvH4_1g20410 FvH4_6g39250 FvH4_6g39250
malus_domestica	MD00G1036800.v1.1 MD05G1042600.v1.1 MD10G1049900.v1.1
prunus_persica	Prupe.6G191500_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064400_v2.0.a1
pyrus_communis	pycom05g03520 pycom10g03500 pycom10g03510 pycom15g28250
rosa_chinensis	RchiOBHm_Chr1g0336561 RchiOBHm_Chr2g0112551 RchiOBHm_Chr2g0112561 RchiOBHm_Chr2g0112631 RchiOBHm_Chr2g0112641 RchiOBHm_Chr2g0153091 RchiOBHm_Chr2g0153111 RchiOBHm_Chr2g0153141 RchiOBHm_Chr2g0153161 RchiOBHm_Chr2g0153171
rosa_laevigata	RLG00000017991 RLG00000017992 RLG00000017995 RLG00000017997 RLG00000020676 RLG00000020677 RLG00000020678 RLG00000020682
rosa_multiflora	Rmu_co8208234.1_g000001 Rmu_co8218328.1_g000001 Rmu_co8425243.1_g000001 Rmu_sc0000218.1_g000037 Rmu_sc0000218.1_g000044 Rmu_sc0000218.1_g000047 Rmu_sc0000218.1_g000052 Rmu_sc0001155.1_g000011 Rmu_sc0001155.1_g000026 Rmu_sc0001155.1_g000029 Rmu_sc0001499.1_g000001 Rmu_sc0001499.1_g000040 Rmu_sc0002401.1_g000032 Rmu_sc0002401.1_g000033 Rmu_sc0004070.1_g000003 Rmu_sc0004070.1_g000004 Rmu_sc0005547.1_g000001 Rmu_sc0006062.1_g000002 Rmu_sc0009780.1_g000005 Rmu_sc0013071.1_g000001 Rmu_sc0013071.1_g000012
rosa_roxburghii	Rroxscaffold_2G00095130 Rroxscaffold_2G00095140 Rroxscaffold_2G00095160 Rroxscaffold_2G00095180 Rroxscaffold_2G00095190 Rroxscaffold_2G00095200 Rroxscaffold_2G00131290 Rroxscaffold_2G00131320 Rroxscaffold_2G00131350
rosa_rugosa	Rorug02G0181500 Rorug02G0181500 Rorug02G0181600 Rorug02G0181700 Rorug02G0437300 Rorug02G0437400
rosa_samantha	Rh1DG154100 Rh2AG235200 Rh2AG235300 Rh2AG235400 Rh2AG235600 Rh2AG235800 Rh2AG499700 Rh2AG499800 Rh2AG500000 Rh2AG500100 Rh2AG500200 Rh2BG248500 Rh2BG248700 Rh2BG248800 Rh2BG511000 Rh2BG511200 Rh2BG511300 Rh2BG511600 Rh2CG239600 Rh2CG239700 Rh2CG239900 Rh2CG240000 Rh2CG485900 Rh2CG486000 Rh2CG486200 Rh2CG486300 Rh2CG486400 Rh2DG242500 Rh2DG242600 Rh2DG242700 Rh2DG242900 Rh2DG243100 Rh2DG522800 Rh2DG523100 Rh2DG523200 Rh2DG523500 Rh2DG523600 Rh5DG200200
rosa_wichuraiana	Rw2G018200 Rw2G018210 Rw2G018230 Rw2G018240 Rw2G041010 Rw2G041020 Rw2G041030 Rw2G041050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	166
AccII	CGCG	1 cut(s)	948
AciI	CCGC	6 cut(s)	350, 925, 946, 987, 1608, 1829
AclWI	GGATC	3 cut(s)	628, 1231, 1495
AcoI	YGGCCR	1 cut(s)	646
AcsI	RAATTY	1 cut(s)	1833
AcuI	CTGAAG	2 cut(s)	1685, 2217
AfaI	GTAC	5 cut(s)	47, 334, 400, 1243, 1916
AflIII	ACRYGT	1 cut(s)	1368
AhlI	ACTAGT	1 cut(s)	329
AjnI	CCWGG	2 cut(s)	529, 1669
AjuI	GAANNNNNNNTTGG	2 cut(s)	820, 852
Alw21I	GWGCWC	1 cut(s)	1300
Alw26I	GTCTC	1 cut(s)	776
AlwI	GGATC	3 cut(s)	628, 1231, 1495
AlwNI	CAGNNNCTG	1 cut(s)	885
Ama87I	CYCGRG	1 cut(s)	184
AoxI	GGCC	4 cut(s)	646, 850, 1051, 1696
ApeKI	GCWGC	4 cut(s)	88, 233, 490, 1604
ApoI	RAATTY	1 cut(s)	1833
AseI	ATTAAT	1 cut(s)	71
Asp700I	GAANNNNTTC	1 cut(s)	1895
AspLEI	GCGC	1 cut(s)	68
AspS9I	GGNCC	2 cut(s)	554, 1052
AsuC2I	CCSGG	2 cut(s)	517, 1799
AsuHPI	GGTGA	7 cut(s)	49, 94, 192, 545, 935, 1001, 2030
AvaI	CYCGRG	1 cut(s)	184
AvaII	GGWCC	1 cut(s)	554
AxyI	CCTNAGG	1 cut(s)	1133
BaeGI	GKGCMC	2 cut(s)	169, 1596
BanI	GGYRCC	1 cut(s)	166
BanII	GRGCYC	1 cut(s)	1300
BbsI	GAAGAC	4 cut(s)	129, 216, 1227, 1563
Bbv12I	GWGCWC	1 cut(s)	1300
BbvI	GCAGC	4 cut(s)	100, 220, 502, 1591
BccI	CCATC	6 cut(s)	156, 793, 944, 1126, 1175, 2224
BciT130I	CCWGG	2 cut(s)	531, 1671
BclI	TGATCA	1 cut(s)	1714
BcnI	CCSGG	2 cut(s)	517, 1799
BcoDI	GTCTC	1 cut(s)	776
BcuI	ACTAGT	1 cut(s)	329
BfaI	CTAG	8 cut(s)	276, 330, 365, 1301, 1340, 1382, 1482, 2224
BfmI	CTRYAG	3 cut(s)	86, 246, 1597
BglII	AGATCT	2 cut(s)	1378, 1566
BisI	GCNGC	5 cut(s)	89, 234, 491, 1605, 1608
BlpI	GCTNAGC	1 cut(s)	747
BlsI	GCNGC	5 cut(s)	90, 235, 492, 1606, 1609
BmcAI	AGTACT	2 cut(s)	334, 1243
Bme1390I	CCNGG	4 cut(s)	517, 531, 1671, 1799
Bme18I	GGWCC	1 cut(s)	554
BmeT110I	CYCGRG	1 cut(s)	184
BmgT120I	GGNCC	2 cut(s)	554, 1052
BmiI	GGNNCC	4 cut(s)	168, 555, 673, 1459
BmrFI	CCNGG	4 cut(s)	517, 531, 1671, 1799
BmsI	GCATC	5 cut(s)	428, 577, 891, 977, 2016
BpiI	GAAGAC	4 cut(s)	129, 216, 1227, 1563
BpmI	CTGGAG	3 cut(s)	129, 1692, 1921
Bpu1102I	GCTNAGC	1 cut(s)	747
BpuEI	CTTGAG	1 cut(s)	675
BpuMI	CCSGG	2 cut(s)	517, 1799
Bsa29I	ATCGAT	1 cut(s)	2081
BsaAI	YACGTR	1 cut(s)	49
BsaBI	GATNNNNATC	1 cut(s)	638
BsaJI	CCNNGG	3 cut(s)	129, 675, 1197
BsaXI	ACNNNNNCTCC	5 cut(s)	443, 473, 1442, 1472, 2204
Bse1I	ACTGG	3 cut(s)	942, 1397, 2020
Bse21I	CCTNAGG	1 cut(s)	1133
Bse8I	GATNNNNATC	1 cut(s)	638
BseBI	CCWGG	2 cut(s)	531, 1671
BseCI	ATCGAT	1 cut(s)	2081
BseDI	CCNNGG	3 cut(s)	129, 675, 1197
BseGI	GGATG	2 cut(s)	592, 2216
BseJI	GATNNNNATC	1 cut(s)	638
BseMII	CTCAG	6 cut(s)	128, 761, 771, 868, 1100, 1263
BseNI	ACTGG	3 cut(s)	942, 1397, 2020
BseRI	GAGGAG	2 cut(s)	1018, 1214
BseSI	GKGCMC	2 cut(s)	169, 1596
BseXI	GCAGC	4 cut(s)	100, 220, 502, 1591
Bsh1236I	CGCG	1 cut(s)	948
BshFI	GGCC	4 cut(s)	648, 852, 1053, 1698
BshNI	GGYRCC	1 cut(s)	166
BshVI	ATCGAT	1 cut(s)	2081
BsiHKAI	GWGCWC	1 cut(s)	1300
BsiHKCI	CYCGRG	1 cut(s)	184
BsiSI	CCGG	3 cut(s)	516, 649, 1799
BslFI	GGGAC	2 cut(s)	1450, 1781
BsmAI	GTCTC	1 cut(s)	776
BsmFI	GGGAC	2 cut(s)	1450, 1781
BsmI	GAATGC	1 cut(s)	235
BsnI	GGCC	4 cut(s)	648, 852, 1053, 1698
BsoBI	CYCGRG	1 cut(s)	184
Bsp1286I	GDGCHC	3 cut(s)	169, 1300, 1596
Bsp1720I	GCTNAGC	1 cut(s)	747
Bsp19I	CCATGG	1 cut(s)	129
BspACI	CCGC	6 cut(s)	350, 925, 946, 987, 1608, 1829
BspANI	GGCC	4 cut(s)	648, 852, 1053, 1698
BspCNI	CTCAG	6 cut(s)	127, 760, 772, 867, 1101, 1264
BspDI	ATCGAT	1 cut(s)	2081
BspFNI	CGCG	1 cut(s)	948
BspHI	TCATGA	2 cut(s)	918, 1653
BspLI	GGNNCC	4 cut(s)	168, 555, 673, 1459
BspMAI	CTGCAG	2 cut(s)	90, 250
BspPI	GGATC	3 cut(s)	628, 1231, 1495
BspQI	GCTCTTC	2 cut(s)	1700, 2175
BspT107I	GGYRCC	1 cut(s)	166
BsrI	ACTGG	3 cut(s)	942, 1397, 2020
BssECI	CCNNGG	3 cut(s)	129, 675, 1197
BssT1I	CCWWGG	1 cut(s)	129
Bst2UI	CCWGG	2 cut(s)	531, 1671
Bst4CI	ACNGT	4 cut(s)	721, 961, 1042, 1074
Bst6I	CTCTTC	3 cut(s)	868, 1700, 2175
BstBAI	YACGTR	1 cut(s)	49
BstC8I	GCNNGC	2 cut(s)	806, 1789
BstDEI	CTNAG	9 cut(s)	114, 605, 747, 780, 854, 1109, 1133, 1272, 2064
BstDSI	CCRYGG	1 cut(s)	129
BstF5I	GGATG	2 cut(s)	592, 2216
BstFNI	CGCG	1 cut(s)	948
BstHHI	GCGC	1 cut(s)	68
BstMAI	GTCTC	1 cut(s)	776
BstMWI	GCNNNNNNNGC	4 cut(s)	377, 1064, 1258, 1730
BstNI	CCWGG	2 cut(s)	531, 1671
BstNSI	RCATGY	1 cut(s)	1372
BstSCI	CCNGG	4 cut(s)	515, 529, 1669, 1797
BstSFI	CTRYAG	3 cut(s)	86, 246, 1597
BstSLI	GKGCMC	2 cut(s)	169, 1596
BstSNI	TACGTA	1 cut(s)	49
BstUI	CGCG	1 cut(s)	948
BstV1I	GCAGC	4 cut(s)	100, 220, 502, 1591
BstV2I	GAAGAC	4 cut(s)	129, 216, 1227, 1563
BstX2I	RGATCY	3 cut(s)	633, 1378, 1566
BstXI	CCANNNNNNTGG	1 cut(s)	130
BstYI	RGATCY	3 cut(s)	633, 1378, 1566
Bsu15I	ATCGAT	1 cut(s)	2081
Bsu36I	CCTNAGG	1 cut(s)	1133
BsuRI	GGCC	4 cut(s)	648, 852, 1053, 1698
BsuTUI	ATCGAT	1 cut(s)	2081
BtgI	CCRYGG	1 cut(s)	129
BtgZI	GCGATG	1 cut(s)	963
BtsCI	GGATG	2 cut(s)	592, 2216
BtsI	GCAGTG	3 cut(s)	83, 318, 400
BtsIMutI	CAGTG	4 cut(s)	83, 318, 400, 862
Cac8I	GCNNGC	2 cut(s)	806, 1789
CaiI	CAGNNNCTG	1 cut(s)	885
CciI	TCATGA	2 cut(s)	918, 1653
CfoI	GCGC	1 cut(s)	68
Cfr13I	GGNCC	2 cut(s)	554, 1052
ClaI	ATCGAT	1 cut(s)	2081
CsiI	ACCWGGT	1 cut(s)	529
Csp6I	GTAC	5 cut(s)	46, 333, 399, 1242, 1915
CviQI	GTAC	5 cut(s)	46, 333, 399, 1242, 1915
DdeI	CTNAG	9 cut(s)	114, 605, 747, 780, 854, 1109, 1133, 1272, 2064
DraI	TTTAAA	1 cut(s)	1248
EaeI	YGGCCR	1 cut(s)	646
Eam1104I	CTCTTC	3 cut(s)	868, 1700, 2175
EarI	CTCTTC	3 cut(s)	868, 1700, 2175
Ecl136II	GAGCTC	1 cut(s)	1298
Eco105I	TACGTA	1 cut(s)	49
Eco130I	CCWWGG	1 cut(s)	129
Eco147I	AGGCCT	1 cut(s)	852
Eco24I	GRGCYC	1 cut(s)	1300
Eco47I	GGWCC	1 cut(s)	554
Eco53kI	GAGCTC	1 cut(s)	1298
Eco57I	CTGAAG	2 cut(s)	1685, 2217
Eco81I	CCTNAGG	1 cut(s)	1133
Eco88I	CYCGRG	1 cut(s)	184
EcoICRI	GAGCTC	1 cut(s)	1298
EcoO109I	RGGNCCY	1 cut(s)	554
EcoRI	GAATTC	1 cut(s)	1833
EcoRII	CCWGG	2 cut(s)	529, 1669
EcoT14I	CCWWGG	1 cut(s)	129
EcoT38I	GRGCYC	1 cut(s)	1300
ErhI	CCWWGG	1 cut(s)	129
FalI	AAGNNNNNCTT	4 cut(s)	645, 677, 2157, 2189
FaqI	GGGAC	2 cut(s)	1450, 1781
FauI	CCCGC	1 cut(s)	1822
FauNDI	CATATG	1 cut(s)	682
FbaI	TGATCA	1 cut(s)	1714
Fnu4HI	GCNGC	5 cut(s)	89, 234, 491, 1605, 1608
FokI	GGATG	2 cut(s)	599, 2203
FriOI	GRGCYC	1 cut(s)	1300
Fsp4HI	GCNGC	5 cut(s)	89, 234, 491, 1605, 1608
FspBI	CTAG	8 cut(s)	276, 330, 365, 1301, 1340, 1382, 1482, 2224
GlaI	GCGC	1 cut(s)	67
GluI	GCNGC	5 cut(s)	89, 234, 491, 1605, 1608
GsuI	CTGGAG	3 cut(s)	129, 1692, 1921
HaeIII	GGCC	4 cut(s)	648, 852, 1053, 1698
HapII	CCGG	3 cut(s)	516, 649, 1799
HhaI	GCGC	1 cut(s)	68
Hin6I	GCGC	1 cut(s)	66
HinP1I	GCGC	1 cut(s)	66
HincII	GTYRAC	1 cut(s)	1162
HindII	GTYRAC	1 cut(s)	1162
HindIII	AAGCTT	1 cut(s)	509
HpaII	CCGG	3 cut(s)	516, 649, 1799
HphI	GGTGA	7 cut(s)	49, 94, 192, 545, 935, 1001, 2030
Hpy166II	GTNNAC	4 cut(s)	1162, 1366, 2107, 2205
Hpy188I	TCNGA	8 cut(s)	117, 480, 1123, 1347, 1704, 1755, 1890, 2197
Hpy8I	GTNNAC	4 cut(s)	1162, 1366, 2107, 2205
HpyCH4III	ACNGT	4 cut(s)	721, 961, 1042, 1074
HpyCH4IV	ACGT	2 cut(s)	48, 384
HpyCH4V	TGCA	8 cut(s)	88, 248, 419, 505, 808, 968, 1406, 1733
HpyF10VI	GCNNNNNNNGC	4 cut(s)	377, 1064, 1258, 1730
HpyF3I	CTNAG	9 cut(s)	114, 605, 747, 780, 854, 1109, 1133, 1272, 2064
HpySE526I	ACGT	2 cut(s)	48, 384
HspAI	GCGC	1 cut(s)	66
Ksp22I	TGATCA	1 cut(s)	1714
LguI	GCTCTTC	2 cut(s)	1700, 2175
LmnI	GCTCC	6 cut(s)	241, 487, 756, 1295, 1463, 1673
Lsp1109I	GCAGC	4 cut(s)	100, 220, 502, 1591
LweI	GCATC	5 cut(s)	428, 577, 891, 977, 2016
MabI	ACCWGGT	1 cut(s)	529
MaeI	CTAG	8 cut(s)	276, 330, 365, 1301, 1340, 1382, 1482, 2224
MaeII	ACGT	2 cut(s)	48, 384
MaeIII	GTNAC	4 cut(s)	360, 685, 1267, 1949
MflI	RGATCY	3 cut(s)	633, 1378, 1566
MhlI	GDGCHC	3 cut(s)	169, 1300, 1596
MluCI	AATT	8 cut(s)	72, 414, 828, 972, 1407, 1462, 1665, 1833
MlyI	GAGTC	5 cut(s)	143, 682, 806, 885, 2186
MmeI	TCCRAC	5 cut(s)	445, 778, 818, 1127, 1600
MroXI	GAANNNNTTC	1 cut(s)	1895
MseI	TTAA	8 cut(s)	71, 387, 716, 899, 933, 1247, 1586, 1664
MslI	CAYNNNNRTG	3 cut(s)	128, 704, 948
MspI	CCGG	3 cut(s)	516, 649, 1799
MspR9I	CCNGG	4 cut(s)	517, 531, 1671, 1799
Mva1269I	GAATGC	1 cut(s)	235
MvaI	CCWGG	2 cut(s)	531, 1671
MvnI	CGCG	1 cut(s)	948
MwoI	GCNNNNNNNGC	4 cut(s)	377, 1064, 1258, 1730
NciI	CCSGG	2 cut(s)	517, 1799
NcoI	CCATGG	1 cut(s)	129
NdeI	CATATG	1 cut(s)	682
NlaIV	GGNNCC	4 cut(s)	168, 555, 673, 1459
NmeAIII	GCCGAG	2 cut(s)	656, 722
NmuCI	GTSAC	1 cut(s)	685
NspI	RCATGY	1 cut(s)	1372
PaeR7I	CTCGAG	1 cut(s)	184
PagI	TCATGA	2 cut(s)	918, 1653
PceI	AGGCCT	1 cut(s)	852
PciI	ACATGT	1 cut(s)	1368
PciSI	GCTCTTC	2 cut(s)	1700, 2175
PctI	GAATGC	1 cut(s)	235
PdmI	GAANNNNTTC	1 cut(s)	1895
PfeI	GAWTC	6 cut(s)	242, 309, 1512, 1539, 1926, 2127
PfoI	TCCNGGA	2 cut(s)	1669, 1797
PkrI	GCNGC	5 cut(s)	90, 235, 492, 1606, 1609
PleI	GAGTC	5 cut(s)	142, 682, 806, 884, 2186
PpsI	GAGTC	5 cut(s)	142, 682, 806, 884, 2186
Ppu21I	YACGTR	1 cut(s)	49
PpuMI	RGGWCCY	1 cut(s)	554
PscI	ACATGT	1 cut(s)	1368
PshBI	ATTAAT	1 cut(s)	71
Psp124BI	GAGCTC	1 cut(s)	1300
Psp5II	RGGWCCY	1 cut(s)	554
Psp6I	CCWGG	2 cut(s)	529, 1669
PspGI	CCWGG	2 cut(s)	529, 1669
PspN4I	GGNNCC	4 cut(s)	168, 555, 673, 1459
PspPI	GGNCC	2 cut(s)	554, 1052
PspPPI	RGGWCCY	1 cut(s)	554
PstI	CTGCAG	2 cut(s)	90, 250
PstNI	CAGNNNCTG	1 cut(s)	885
PsuI	RGATCY	3 cut(s)	633, 1378, 1566
RsaI	GTAC	5 cut(s)	47, 334, 400, 1243, 1916
RsaNI	GTAC	5 cut(s)	46, 333, 399, 1242, 1915
RseI	CAYNNNNRTG	3 cut(s)	128, 704, 948
SacI	GAGCTC	1 cut(s)	1300
SapI	GCTCTTC	2 cut(s)	1700, 2175
SaqAI	TTAA	8 cut(s)	71, 387, 716, 899, 933, 1247, 1586, 1664
SatI	GCNGC	5 cut(s)	89, 234, 491, 1605, 1608
Sau96I	GGNCC	2 cut(s)	554, 1052
ScaI	AGTACT	2 cut(s)	334, 1243
SchI	GAGTC	5 cut(s)	143, 682, 806, 885, 2186
ScrFI	CCNGG	4 cut(s)	517, 531, 1671, 1799
SduI	GDGCHC	3 cut(s)	169, 1300, 1596
SexAI	ACCWGGT	1 cut(s)	529
SfaNI	GCATC	5 cut(s)	428, 577, 891, 977, 2016
SfcI	CTRYAG	3 cut(s)	86, 246, 1597
Sfr274I	CTCGAG	1 cut(s)	184
SinI	GGWCC	1 cut(s)	554
SlaI	CTCGAG	1 cut(s)	184
SmiMI	CAYNNNNRTG	3 cut(s)	128, 704, 948
SmlI	CTYRAG	2 cut(s)	184, 690
SmoI	CTYRAG	2 cut(s)	184, 690
SnaBI	TACGTA	1 cut(s)	49
SpeI	ACTAGT	1 cut(s)	329
Sse9I	AATT	8 cut(s)	72, 414, 828, 972, 1407, 1462, 1665, 1833
SseBI	AGGCCT	1 cut(s)	852
SsiI	CCGC	6 cut(s)	350, 925, 946, 987, 1608, 1829
SspI	AATATT	2 cut(s)	1213, 2038
SspMI	CTAG	8 cut(s)	276, 330, 365, 1301, 1340, 1382, 1482, 2224
SstI	GAGCTC	1 cut(s)	1300
StuI	AGGCCT	1 cut(s)	852
StyD4I	CCNGG	4 cut(s)	515, 529, 1669, 1797
StyI	CCWWGG	1 cut(s)	129
TaaI	ACNGT	4 cut(s)	721, 961, 1042, 1074
TaiI	ACGT	2 cut(s)	51, 387
TaqI	TCGA	5 cut(s)	42, 185, 227, 1375, 2081
TasI	AATT	8 cut(s)	72, 414, 828, 972, 1407, 1462, 1665, 1833
TatI	WGTACW	3 cut(s)	332, 1241, 1914
TauI	GCSGC	1 cut(s)	1610
TfiI	GAWTC	6 cut(s)	242, 309, 1512, 1539, 1926, 2127
Tru1I	TTAA	8 cut(s)	71, 387, 716, 899, 933, 1247, 1586, 1664
Tru9I	TTAA	8 cut(s)	71, 387, 716, 899, 933, 1247, 1586, 1664
TscAI	CASTG	4 cut(s)	90, 325, 400, 862
TseFI	GTSAC	1 cut(s)	685
TseI	GCWGC	4 cut(s)	88, 233, 490, 1604
Tsp45I	GTSAC	1 cut(s)	685
TspDTI	ATGAA	9 cut(s)	17, 833, 935, 965, 1182, 1315, 1436, 1513, 1577
TspGWI	ACGGA	2 cut(s)	684, 2222
TspRI	CASTG	4 cut(s)	90, 325, 400, 862
VpaK11BI	GGWCC	1 cut(s)	554
VspI	ATTAAT	1 cut(s)	71
XapI	RAATTY	1 cut(s)	1833
XbaI	TCTAGA	1 cut(s)	1300
XceI	RCATGY	1 cut(s)	1372
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1289
XhoI	CTCGAG	1 cut(s)	184
XmnI	GAANNNNTTC	1 cut(s)	1895
XspI	CTAG	8 cut(s)	276, 330, 365, 1301, 1340, 1382, 1482, 2224
ZrmI	AGTACT	2 cut(s)	334, 1243

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.