Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0000287

Physical Location & Seq

Genomic Coordinates Forward (+)

55883532 .. 55885278

Gene Structure 1747 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0437400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1179 bp

ATGGAGAGGTGGGATCACAAATCACAACGAGAAGCTCGACACAGTAAACACCGTAGAGAAAACCCTTCTTTCTCTTCGTCTCTGCTGGACTCTATTTACCGCTCAATCGACGAAGGCGAACAGATTGGAACTCGGAGAGAAGGAGAGCTCATATTTTACAAGGAATCCATGAGGAAGAAACAGAGCGGTACTGTTTCTTCTAATGGCGTCAAAGCAGAGGAGGAGATCATGAGTCTCCGGCGAGCCTGCTTGATAGAGAAATGGATGGAGAAGAAAGCTGCGGTGGCTGACAAAGTCGTGGTTCGAAGAAATTCAATGGCGGATTTCGACAGGAGGTTCTTGAATTCGAGCTCCAGCTCTTCGGATTCGAGTTGCGGAGGTGGGTTTTCTTCGTCGGAGTCAGACTCCATGTACGGGTCGAGATCGAGGTCCTCATCTTCATGCTACAGCATGCCGAGGCCCAAACCCATCCGGACCAGCCTCTCATCGACCCGACCTGAAACCCATCAGAAGCCGAAGCAAGAAAACGGGTTCGTGAAGACGAAATCCAAGGCGTTGAAGATTTACGGCGACTTGAAGAAAGTGAAGCAGCCAATCTCACCGGGTGGAAAACTCGCCAGTTTTCTCAATTCCATTTTCAACAGCGGAAACGGAAAGAAGCACAAGATTAACATCGACGACTTGGGTTCCGACAGGAACTCGAAATCGACAAACGGGTCGAACTGTTCTTCTGCTTCTTCGTTTTCAAGGTCCTGTTTGCGCAAAACTTCTGTTTCTAGAGGTGAACTCAGCAATGGCGGTGGTGACAGTGCGAAAAGGTCAGTGAGGTTTTATCCGGTGAGTGTGATCGTGGACGAGGATTGCCGGCCGTGCGGGCACAAAACTCTTGAAGAGATGAAGAGGAGTTCTGCACTTGACTGTTTTGTTATGGATGAAGATGATCATCGTCGCCAAGTTGAGGAAGTAGCCAGAAGCTACTTGATGAAGAACTACCAGAAGAAGACTCATGATGAGGAAATGGATGAGGATGAGGACGATGATGCAGCGAGCTATGCGAGTTCTGATCTGTTCGAGTTGGACACTGTTGGAGTTGAAGAAAGGTACCGTGAAGAATTACCGGTGTATGAAACTACGTATCTCGACAGAAATCGAGCCATTGCTAATGGTTTGATTTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005319 GO:0005342 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006950 GO:0006970 GO:0007275 GO:0007389 GO:0008028 GO:0008150 GO:0008509 GO:0008514 GO:0009611 GO:0009628 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0009897 GO:0009965 GO:0009986 GO:0010016 GO:0010033 GO:0010051 GO:0010154 GO:0010222 GO:0010588 GO:0010876 GO:0015075 GO:0015245 GO:0015318 GO:0015399 GO:0015405 GO:0015711 GO:0015718 GO:0015849 GO:0015908 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0022804 GO:0022857 GO:0031224 GO:0032501 GO:0032502 GO:0033036 GO:0033993 GO:0034220 GO:0042221 GO:0042623 GO:0042626 GO:0042802 GO:0042803 GO:0043492 GO:0044425 GO:0044459 GO:0044464 GO:0046942 GO:0046943 GO:0046983 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071702 GO:0071944 GO:0080051 GO:0090698 GO:0097305 GO:0098552 GO:0098656 GO:0099402 GO:1901700 GO:1903825 GO:1905039 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

392

Amino Acids

44.17

Weight (kDa)

8.73

Isoelectric Point (pI)

70.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000287)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20410 FvH4_1g20410 FvH4_6g39250 FvH4_6g39250
malus_domestica	MD00G1036800.v1.1 MD05G1042600.v1.1 MD10G1049900.v1.1
prunus_persica	Prupe.6G191500_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064400_v2.0.a1
pyrus_communis	pycom05g03520 pycom10g03500 pycom10g03510 pycom15g28250
rosa_chinensis	RchiOBHm_Chr1g0336561 RchiOBHm_Chr2g0112551 RchiOBHm_Chr2g0112561 RchiOBHm_Chr2g0112631 RchiOBHm_Chr2g0112641 RchiOBHm_Chr2g0153091 RchiOBHm_Chr2g0153111 RchiOBHm_Chr2g0153141 RchiOBHm_Chr2g0153161 RchiOBHm_Chr2g0153171
rosa_laevigata	RLG00000017991 RLG00000017992 RLG00000017995 RLG00000017997 RLG00000020676 RLG00000020677 RLG00000020678 RLG00000020682
rosa_multiflora	Rmu_co8208234.1_g000001 Rmu_co8218328.1_g000001 Rmu_co8425243.1_g000001 Rmu_sc0000218.1_g000037 Rmu_sc0000218.1_g000044 Rmu_sc0000218.1_g000047 Rmu_sc0000218.1_g000052 Rmu_sc0001155.1_g000011 Rmu_sc0001155.1_g000026 Rmu_sc0001155.1_g000029 Rmu_sc0001499.1_g000001 Rmu_sc0001499.1_g000040 Rmu_sc0002401.1_g000032 Rmu_sc0002401.1_g000033 Rmu_sc0004070.1_g000003 Rmu_sc0004070.1_g000004 Rmu_sc0005547.1_g000001 Rmu_sc0006062.1_g000002 Rmu_sc0009780.1_g000005 Rmu_sc0013071.1_g000001 Rmu_sc0013071.1_g000012
rosa_roxburghii	Rroxscaffold_2G00095130 Rroxscaffold_2G00095140 Rroxscaffold_2G00095160 Rroxscaffold_2G00095180 Rroxscaffold_2G00095190 Rroxscaffold_2G00095200 Rroxscaffold_2G00131290 Rroxscaffold_2G00131320 Rroxscaffold_2G00131350
rosa_rugosa	Rorug02G0181500 Rorug02G0181500 Rorug02G0181600 Rorug02G0181700 Rorug02G0437300 Rorug02G0437400
rosa_samantha	Rh1DG154100 Rh2AG235200 Rh2AG235300 Rh2AG235400 Rh2AG235600 Rh2AG235800 Rh2AG499700 Rh2AG499800 Rh2AG500000 Rh2AG500100 Rh2AG500200 Rh2BG248500 Rh2BG248700 Rh2BG248800 Rh2BG511000 Rh2BG511200 Rh2BG511300 Rh2BG511600 Rh2CG239600 Rh2CG239700 Rh2CG239900 Rh2CG240000 Rh2CG485900 Rh2CG486000 Rh2CG486200 Rh2CG486300 Rh2CG486400 Rh2DG242500 Rh2DG242600 Rh2DG242700 Rh2DG242900 Rh2DG243100 Rh2DG522800 Rh2DG523100 Rh2DG523200 Rh2DG523500 Rh2DG523600 Rh5DG200200
rosa_wichuraiana	Rw2G018200 Rw2G018210 Rw2G018230 Rw2G018240 Rw2G041010 Rw2G041020 Rw2G041030 Rw2G041050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	715
Acc16I	TGCGCA	1 cut(s)	761
Acc65I	GGTACC	1 cut(s)	1101
AccB1I	GGYRCC	1 cut(s)	1101
AccBSI	CCGCTC	2 cut(s)	102, 186
AccIII	TCCGGA	1 cut(s)	471
AciI	CCGC	8 cut(s)	100, 186, 281, 320, 375, 645, 798, 873
AclWI	GGATC	1 cut(s)	21
AcoI	YGGCCR	1 cut(s)	866
AcsI	RAATTY	2 cut(s)	310, 343
AcyI	GRCGYC	1 cut(s)	207
AdeI	CACNNNGTG	1 cut(s)	605
AfaI	GTAC	3 cut(s)	190, 413, 1103
AfiI	CCNNNNNNNGG	2 cut(s)	414, 958
AgeI	ACCGGT	1 cut(s)	1117
AgsI	TTSAA	8 cut(s)	315, 343, 559, 577, 640, 747, 890, 1094
AluBI	AGCT	7 cut(s)	35, 148, 278, 351, 357, 975, 1050
AluI	AGCT	7 cut(s)	35, 148, 278, 351, 357, 975, 1050
Alw21I	GWGCWC	2 cut(s)	150, 353
Alw26I	GTCTC	2 cut(s)	84, 239
AlwI	GGATC	1 cut(s)	21
Aor13HI	TCCGGA	1 cut(s)	471
AoxI	GGCC	2 cut(s)	458, 866
ApeKI	GCWGC	3 cut(s)	278, 589, 1043
ApoI	RAATTY	2 cut(s)	310, 343
AsiGI	ACCGGT	1 cut(s)	1117
Asp700I	GAANNNNTTC	1 cut(s)	310
Asp718I	GGTACC	1 cut(s)	1101
AspLEI	GCGC	1 cut(s)	762
AspS9I	GGNCC	4 cut(s)	429, 459, 474, 750
AsuC2I	CCSGG	1 cut(s)	603
AsuHPI	GGTGA	4 cut(s)	591, 794, 815, 850
AsuII	TTCGAA	1 cut(s)	304
AvaII	GGWCC	3 cut(s)	429, 474, 750
BaeGI	GKGCMC	1 cut(s)	879
BanI	GGYRCC	1 cut(s)	1101
BanII	GRGCYC	2 cut(s)	150, 353
BarI	GAAGNNNNNNTAC	2 cut(s)	181, 213
BbsI	GAAGAC	2 cut(s)	545, 1007
Bbv12I	GWGCWC	2 cut(s)	150, 353
BbvI	GCAGC	3 cut(s)	265, 601, 1055
BccI	CCATC	3 cut(s)	259, 476, 513
BceAI	ACGGC	2 cut(s)	583, 853
BclI	TGATCA	1 cut(s)	940
BcnI	CCSGG	1 cut(s)	603
BcoDI	GTCTC	2 cut(s)	84, 239
BfaI	CTAG	1 cut(s)	777
BfmI	CTRYAG	1 cut(s)	445
BglI	GCCNNNNNGGC	1 cut(s)	874
BisI	GCNGC	3 cut(s)	279, 590, 1044
BlsI	GCNGC	3 cut(s)	280, 591, 1045
Bme1390I	CCNGG	1 cut(s)	603
Bme18I	GGWCC	3 cut(s)	429, 474, 750
BmgT120I	GGNCC	4 cut(s)	429, 459, 474, 750
BmiI	GGNNCC	2 cut(s)	688, 1103
BmrFI	CCNGG	1 cut(s)	603
BmsI	GCATC	1 cut(s)	1030
BpiI	GAAGAC	2 cut(s)	545, 1007
BplI	GAGNNNNNCTC	4 cut(s)	389, 421, 771, 803
BpmI	CTGGAG	1 cut(s)	337
Bpu14I	TTCGAA	1 cut(s)	304
BpuMI	CCSGG	1 cut(s)	603
BsaAI	YACGTR	1 cut(s)	1134
BsaBI	GATNNNNATC	2 cut(s)	671, 942
BsaHI	GRCGYC	1 cut(s)	207
BsaJI	CCNNGG	2 cut(s)	455, 549
BsaWI	WCCGGW	3 cut(s)	471, 835, 1117
Bsc4I	CCNNNNNNNGG	2 cut(s)	414, 958
Bse118I	RCCGGY	2 cut(s)	864, 1117
Bse1I	ACTGG	1 cut(s)	618
Bse3DI	GCAATG	2 cut(s)	799, 1155
Bse8I	GATNNNNATC	2 cut(s)	671, 942
BseAI	TCCGGA	1 cut(s)	471
BseDI	CCNNGG	2 cut(s)	455, 549
BseGI	GGATG	5 cut(s)	270, 468, 937, 1027, 1033
BseJI	GATNNNNATC	2 cut(s)	671, 942
BseLI	CCNNNNNNNGG	2 cut(s)	414, 958
BseMI	GCAATG	2 cut(s)	799, 1155
BseMII	CTCAG	1 cut(s)	802
BseNI	ACTGG	1 cut(s)	618
BseRI	GAGGAG	3 cut(s)	233, 236, 916
BseSI	GKGCMC	1 cut(s)	879
BseX3I	CGGCCG	1 cut(s)	866
BseXI	GCAGC	3 cut(s)	265, 601, 1055
BsgI	GTGCAG	1 cut(s)	894
Bsh1285I	CGRYCG	1 cut(s)	869
BshFI	GGCC	2 cut(s)	460, 868
BshNI	GGYRCC	1 cut(s)	1101
BshTI	ACCGGT	1 cut(s)	1117
BsiEI	CGRYCG	1 cut(s)	869
BsiHKAI	GWGCWC	2 cut(s)	150, 353
BsiSI	CCGG	6 cut(s)	238, 472, 602, 836, 865, 1118
BslI	CCNNNNNNNGG	2 cut(s)	414, 958
BsmAI	GTCTC	2 cut(s)	84, 239
BsmBI	CGTCTC	1 cut(s)	84
BsnI	GGCC	2 cut(s)	460, 868
Bsp119I	TTCGAA	1 cut(s)	304
Bsp1286I	GDGCHC	3 cut(s)	150, 353, 879
Bsp13I	TCCGGA	1 cut(s)	471
Bsp143I	GATC	6 cut(s)	13, 225, 422, 846, 940, 1063
BspACI	CCGC	8 cut(s)	100, 186, 281, 320, 375, 645, 798, 873
BspANI	GGCC	2 cut(s)	460, 868
BspCNI	CTCAG	1 cut(s)	801
BspEI	TCCGGA	1 cut(s)	471
BspHI	TCATGA	2 cut(s)	228, 1006
BspLI	GGNNCC	2 cut(s)	688, 1103
BspPI	GGATC	1 cut(s)	21
BspQI	GCTCTTC	1 cut(s)	364
BspT104I	TTCGAA	1 cut(s)	304
BspT107I	GGYRCC	1 cut(s)	1101
BsrBI	CCGCTC	2 cut(s)	102, 186
BsrDI	GCAATG	2 cut(s)	799, 1155
BsrFI	RCCGGY	2 cut(s)	864, 1117
BsrI	ACTGG	1 cut(s)	618
BssAI	RCCGGY	2 cut(s)	864, 1117
BssECI	CCNNGG	2 cut(s)	455, 549
BssMI	GATC	6 cut(s)	13, 225, 422, 846, 940, 1063
BssNI	GRCGYC	1 cut(s)	207
BssT1I	CCWWGG	1 cut(s)	549
Bst4CI	ACNGT	8 cut(s)	44, 53, 193, 725, 809, 920, 1084, 1106
Bst6I	CTCTTC	4 cut(s)	79, 364, 885, 893
BstACI	GRCGYC	1 cut(s)	207
BstBAI	YACGTR	1 cut(s)	1134
BstBI	TTCGAA	1 cut(s)	304
BstC8I	GCNNGC	6 cut(s)	243, 247, 452, 866, 875, 1048
BstDEI	CTNAG	1 cut(s)	788
BstF5I	GGATG	5 cut(s)	270, 468, 937, 1027, 1033
BstHHI	GCGC	1 cut(s)	762
BstKTI	GATC	6 cut(s)	16, 228, 425, 849, 943, 1066
BstMAI	GTCTC	2 cut(s)	84, 239
BstMBI	GATC	6 cut(s)	13, 225, 422, 846, 940, 1063
BstMCI	CGRYCG	1 cut(s)	869
BstMWI	GCNNNNNNNGC	4 cut(s)	284, 870, 874, 1052
BstNSI	RCATGY	1 cut(s)	454
BstSCI	CCNGG	1 cut(s)	601
BstSFI	CTRYAG	1 cut(s)	445
BstSLI	GKGCMC	1 cut(s)	879
BstSNI	TACGTA	1 cut(s)	1134
BstV1I	GCAGC	3 cut(s)	265, 601, 1055
BstV2I	GAAGAC	2 cut(s)	545, 1007
BstZI	CGGCCG	1 cut(s)	866
BsuRI	GGCC	2 cut(s)	460, 868
BtsCI	GGATG	5 cut(s)	270, 468, 937, 1027, 1033
BtsIMutI	CAGTG	3 cut(s)	814, 828, 1080
Cac8I	GCNNGC	6 cut(s)	243, 247, 452, 866, 875, 1048
CciI	TCATGA	2 cut(s)	228, 1006
CfoI	GCGC	1 cut(s)	762
Cfr10I	RCCGGY	2 cut(s)	864, 1117
Cfr13I	GGNCC	4 cut(s)	429, 459, 474, 750
CseI	GACGC	1 cut(s)	196
Csp6I	GTAC	3 cut(s)	189, 412, 1102
CspAI	ACCGGT	1 cut(s)	1117
CspCI	CAANNNNNGTGG	2 cut(s)	781, 816
CviAII	CATG	6 cut(s)	169, 229, 409, 441, 451, 1007
CviQI	GTAC	3 cut(s)	189, 412, 1102
DdeI	CTNAG	1 cut(s)	788
DpnI	GATC	6 cut(s)	15, 227, 424, 848, 942, 1065
DpnII	GATC	6 cut(s)	13, 225, 422, 846, 940, 1063
DraIII	CACNNNGTG	1 cut(s)	605
DrdI	GACNNNNNNGTC	1 cut(s)	715
DseDI	GACNNNNNNGTC	1 cut(s)	715
EaeI	YGGCCR	1 cut(s)	866
EagI	CGGCCG	1 cut(s)	866
Eam1104I	CTCTTC	4 cut(s)	79, 364, 885, 893
EarI	CTCTTC	4 cut(s)	79, 364, 885, 893
EciI	GGCGGA	1 cut(s)	335
Ecl136II	GAGCTC	2 cut(s)	148, 351
EclXI	CGGCCG	1 cut(s)	866
Eco105I	TACGTA	1 cut(s)	1134
Eco130I	CCWWGG	1 cut(s)	549
Eco24I	GRGCYC	2 cut(s)	150, 353
Eco47I	GGWCC	3 cut(s)	429, 474, 750
Eco52I	CGGCCG	1 cut(s)	866
Eco53kI	GAGCTC	2 cut(s)	148, 351
EcoICRI	GAGCTC	2 cut(s)	148, 351
EcoO109I	RGGNCCY	2 cut(s)	429, 750
EcoRI	GAATTC	1 cut(s)	343
EcoT14I	CCWWGG	1 cut(s)	549
EcoT38I	GRGCYC	2 cut(s)	150, 353
ErhI	CCWWGG	1 cut(s)	549
Esp3I	CGTCTC	1 cut(s)	84
FaeI	CATG	6 cut(s)	172, 232, 412, 444, 454, 1010
FatI	CATG	6 cut(s)	168, 228, 408, 440, 450, 1006
FauI	CCCGC	1 cut(s)	866
FbaI	TGATCA	1 cut(s)	940
Fnu4HI	GCNGC	3 cut(s)	279, 590, 1044
FokI	GGATG	5 cut(s)	277, 455, 944, 1034, 1040
FriOI	GRGCYC	2 cut(s)	150, 353
Fsp4HI	GCNGC	3 cut(s)	279, 590, 1044
FspBI	CTAG	1 cut(s)	777
FspI	TGCGCA	1 cut(s)	761
GlaI	GCGC	1 cut(s)	761
GluI	GCNGC	3 cut(s)	279, 590, 1044
GsuI	CTGGAG	1 cut(s)	337
HaeIII	GGCC	2 cut(s)	460, 868
HapII	CCGG	6 cut(s)	238, 472, 602, 836, 865, 1118
HgaI	GACGC	1 cut(s)	196
HhaI	GCGC	1 cut(s)	762
Hin1I	GRCGYC	1 cut(s)	207
Hin1II	CATG	6 cut(s)	172, 232, 412, 444, 454, 1010
Hin6I	GCGC	1 cut(s)	760
HinP1I	GCGC	1 cut(s)	760
HinfI	GANTC	7 cut(s)	89, 164, 232, 365, 398, 404, 1003
HpaII	CCGG	6 cut(s)	238, 472, 602, 836, 865, 1118
HphI	GGTGA	4 cut(s)	591, 794, 815, 850
Hpy166II	GTNNAC	3 cut(s)	47, 785, 853
Hpy188I	TCNGA	7 cut(s)	135, 364, 397, 403, 510, 691, 1063
Hpy188III	TCNNGA	9 cut(s)	229, 340, 420, 472, 535, 777, 887, 1007, 1139
Hpy8I	GTNNAC	3 cut(s)	47, 785, 853
Hpy99I	CGWCG	4 cut(s)	113, 397, 680, 951
HpyAV	CCTTC	3 cut(s)	75, 107, 134
HpyCH4III	ACNGT	8 cut(s)	44, 53, 193, 725, 809, 920, 1084, 1106
HpyCH4IV	ACGT	1 cut(s)	1133
HpyCH4V	TGCA	2 cut(s)	911, 1043
HpyF10VI	GCNNNNNNNGC	4 cut(s)	284, 870, 874, 1052
HpyF3I	CTNAG	1 cut(s)	788
HpySE526I	ACGT	1 cut(s)	1133
Hsp92I	GRCGYC	1 cut(s)	207
Hsp92II	CATG	6 cut(s)	172, 232, 412, 444, 454, 1010
HspAI	GCGC	1 cut(s)	760
Kpn2I	TCCGGA	1 cut(s)	471
KpnI	GGTACC	1 cut(s)	1105
KroI	GCCGGC	1 cut(s)	864
KroNI	GCCGGC	1 cut(s)	866
Ksp22I	TGATCA	1 cut(s)	940
Kzo9I	GATC	6 cut(s)	13, 225, 422, 846, 940, 1063
LguI	GCTCTTC	1 cut(s)	364
LmnI	GCTCC	1 cut(s)	356
Lsp1109I	GCAGC	3 cut(s)	265, 601, 1055
LweI	GCATC	1 cut(s)	1030
MaeI	CTAG	1 cut(s)	777
MaeII	ACGT	1 cut(s)	1133
MaeIII	GTNAC	1 cut(s)	803
MalI	GATC	6 cut(s)	15, 227, 424, 848, 942, 1065
MbiI	CCGCTC	2 cut(s)	102, 186
MboI	GATC	6 cut(s)	13, 225, 422, 846, 940, 1063
MhlI	GDGCHC	3 cut(s)	150, 353, 879
MluCI	AATT	4 cut(s)	310, 343, 628, 1112
MlyI	GAGTC	5 cut(s)	83, 241, 398, 407, 997
MmeI	TCCRAC	4 cut(s)	375, 714, 1056, 1066
MroI	TCCGGA	1 cut(s)	471
MroNI	GCCGGC	1 cut(s)	864
MroXI	GAANNNNTTC	1 cut(s)	310
MseI	TTAA	1 cut(s)	669
MslI	CAYNNNNRTG	1 cut(s)	439
MspA1I	CMGCKG	1 cut(s)	645
MspI	CCGG	6 cut(s)	238, 472, 602, 836, 865, 1118
MspR9I	CCNGG	1 cut(s)	603
MwoI	GCNNNNNNNGC	4 cut(s)	284, 870, 874, 1052
NaeI	GCCGGC	1 cut(s)	866
NciI	CCSGG	1 cut(s)	603
NdeII	GATC	6 cut(s)	13, 225, 422, 846, 940, 1063
NgoMIV	GCCGGC	1 cut(s)	864
NlaIII	CATG	6 cut(s)	172, 232, 412, 444, 454, 1010
NlaIV	GGNNCC	2 cut(s)	688, 1103
NmeAIII	GCCGAG	1 cut(s)	480
NmuCI	GTSAC	1 cut(s)	803
NsbI	TGCGCA	1 cut(s)	761
NspI	RCATGY	1 cut(s)	454
NspV	TTCGAA	1 cut(s)	304
PaeI	GCATGC	1 cut(s)	454
PagI	TCATGA	2 cut(s)	228, 1006
PciSI	GCTCTTC	1 cut(s)	364
PcsI	WCGNNNNNNNCGW	2 cut(s)	34, 114
PdiI	GCCGGC	1 cut(s)	866
PdmI	GAANNNNTTC	1 cut(s)	310
PfeI	GAWTC	2 cut(s)	164, 365
PflFI	GACNNNGTC	1 cut(s)	293
PinAI	ACCGGT	1 cut(s)	1117
PkrI	GCNGC	3 cut(s)	280, 591, 1045
PleI	GAGTC	5 cut(s)	83, 240, 398, 406, 997
PpsI	GAGTC	5 cut(s)	83, 240, 398, 406, 997
Ppu21I	YACGTR	1 cut(s)	1134
PpuMI	RGGWCCY	2 cut(s)	429, 750
Psp124BI	GAGCTC	2 cut(s)	150, 353
Psp5II	RGGWCCY	2 cut(s)	429, 750
PspN4I	GGNNCC	2 cut(s)	688, 1103
PspPI	GGNCC	4 cut(s)	429, 459, 474, 750
PspPPI	RGGWCCY	2 cut(s)	429, 750
PsyI	GACNNNGTC	1 cut(s)	293
RsaI	GTAC	3 cut(s)	190, 413, 1103
RsaNI	GTAC	3 cut(s)	189, 412, 1102
RseI	CAYNNNNRTG	1 cut(s)	439
SacI	GAGCTC	2 cut(s)	150, 353
SapI	GCTCTTC	1 cut(s)	364
SaqAI	TTAA	1 cut(s)	669
SatI	GCNGC	3 cut(s)	279, 590, 1044
Sau3AI	GATC	6 cut(s)	13, 225, 422, 846, 940, 1063
Sau96I	GGNCC	4 cut(s)	429, 459, 474, 750
SchI	GAGTC	5 cut(s)	83, 241, 398, 407, 997
ScrFI	CCNGG	1 cut(s)	603
SduI	GDGCHC	3 cut(s)	150, 353, 879
SfaNI	GCATC	1 cut(s)	1030
SfcI	CTRYAG	1 cut(s)	445
SfuI	TTCGAA	1 cut(s)	304
SinI	GGWCC	3 cut(s)	429, 474, 750
SmiMI	CAYNNNNRTG	1 cut(s)	439
SnaBI	TACGTA	1 cut(s)	1134
SphI	GCATGC	1 cut(s)	454
Sse9I	AATT	4 cut(s)	310, 343, 628, 1112
SsiI	CCGC	8 cut(s)	100, 186, 281, 320, 375, 645, 798, 873
SspMI	CTAG	1 cut(s)	777
SstI	GAGCTC	2 cut(s)	150, 353
StyD4I	CCNGG	1 cut(s)	601
StyI	CCWWGG	1 cut(s)	549
TaaI	ACNGT	8 cut(s)	44, 53, 193, 725, 809, 920, 1084, 1106
TaiI	ACGT	1 cut(s)	1136
TasI	AATT	4 cut(s)	310, 343, 628, 1112
TfiI	GAWTC	2 cut(s)	164, 365
Tru1I	TTAA	1 cut(s)	669
Tru9I	TTAA	1 cut(s)	669
TscAI	CASTG	3 cut(s)	814, 828, 1087
TseFI	GTSAC	1 cut(s)	803
TseI	GCWGC	3 cut(s)	278, 589, 1043
Tsp45I	GTSAC	1 cut(s)	803
TspDTI	ATGAA	5 cut(s)	429, 911, 948, 998, 1140
TspGWI	ACGGA	1 cut(s)	666
TspRI	CASTG	3 cut(s)	814, 828, 1087
Tth111I	GACNNNGTC	1 cut(s)	293
VpaK11BI	GGWCC	3 cut(s)	429, 474, 750
XapI	RAATTY	2 cut(s)	310, 343
XbaI	TCTAGA	1 cut(s)	776
XceI	RCATGY	1 cut(s)	454
XmnI	GAANNNNTTC	1 cut(s)	310
XspI	CTAG	1 cut(s)	777

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.