Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000287

Physical Location & Seq

Genomic Coordinates Forward (+)

24561800 .. 24565909

Gene Structure 4110 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ48600

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2064 bp

ATGGAGTCTTCTTCTCCAGCTAGTTTTCCCAGATGGGCACCAAGTCCAAGCTCCTCAACAGTACTATTATCACCTGCGGAAGACCCCAGGTTTGAGGCAAGTGCTGATCATAATGATCATGATTCTGTAGAAGATGGCATATCCTCATTATCTTCTAGTATGGACAGGATTTTCCCATTTAGCGTTGAAGTCAATGGCACTACTACTGCTGCCGCCGCCGCCGCTGCTTCTGTGGTTAAAAAGTCACTAGATGATCAAAGTGCTTATGTTAGAAGCAGAAGTGGTGCTTATGTTAGAAGCAGAAGTGGTACTATGCTTGTTCCTTTGACATGGGAGGACCTGTGGGTTGGAGTAGGTGATGGGAAAGGTGGGCAGAGAATGATTTTGCAGGGGCTTACTGGGTTTGCTCAACCTGGTCAGGTTTTGGCTATTATGGGCCCTTCTGGCTGTGGCAAATCTACCCTTTTGGATGCTTTAGCAGGAAGGCTAAATTCAAACACACAGCAGAGAGGGAAGATCCTGATCAATGGCCGCAAAGAAAAACTTGTTTGCGGAACCTCGGCATATGTGACACAAGATGACACACTAATGACAACCTTAACAGTAAGGGAAGCTGTGTATTACTCGGCGCAGCTCCAACTGCCTAACTCCATGTCGAAAGCAGAAAAGAAGGAAAGAGCAGAGACGACAATAAGGGAGATGGGCCTGCAAGACTCCATGAACACAAGAATAGGAGGTTGGAGCAGAAAAGGTCTCAGTGGTGGACAAAAAAGAAGAGTTAGCATCTGCATTGAAATCTTGACTCGTCCCAAGCTTCTCTTCCTTGATGAGCCTACTAGTGGGCTAGACAGTGCTGCTTCTTACCACGTCATGAAACGCATTGTGAAGCTGGCTCACCGGGATGGAAGGACAGTAATTGCATCAATTCATCAACCTAGCAGTGAAGTTTTTGAGCTTTTCCAAAACCTCTGCCTTCTTTCCTCTGGCAGAACAGTCTATTTTGGCCCTGCTTCAAAGGCAGAACAGGACATCGAACAAGGACATGATGGCAAAACAAGCACTGAGGAAGCAATTAATATTCTCATAAGATCATACGAGTCTTCAAATACTTTAAAGCAAGTTCACCTCAGGGTAAATGAGATTTGCCAACAGAGAGGTGGAGCTCTGGAGAAGGGAAGCCATGCCAACTTCATAACTCAATGCCTGGTTTTGACAAGGAGATCATTTGTGAACATGTATCGCGATCTAGGCTACTACTGGCTTCGACTTGCAATTTACATTGCCCTGTGCTTATGTGTAGGGACTATTTTTCATGACATCGGCTCCACTTTTGGGTCAATACAGGCTAGAGGATCAATGCTCATGTTTGTTGCATCATTCTTGACTTTCATGGCAATTGGTGGATTCCCTTCTTTTGTTGAAGACATGAAGATCTTCGGGCGGGAAAGATTAAACGGGCACTATGGCGTTGCTGCATATGTGGTTGGAAACACACTTTCCTCCATTCCATATTTGCTAATGGTATCCTTAATTCCTGGAGCAATTGCCTATTACCTTGTTGGCCTTCAGAAGAGCTTTGACCACTTCGCCTATTTTGCATTGGTTCTATTTGTGTGTCTGATGTTGGTTGAGAGCCTGATGATGATTGTAGCAAGCATTGTGCCAGATTTCCTCATGGGGATCATCACAGGTGCTGGGATTCAAGGAATAATGATGTTGAATGGAGGTTTCTTCCGTTTGCCAGACGATCTTCCGAAGCCCTTTTGGAGATACCCAATGTACTACATTGCATTCCACAAGTATGCAAATCAAGGATTCTACAAGAATGAGTTTGAAGGACGAACATTCCCCAATAACCAAGCAGGAGGGCCACCCACCATTACAGGTGAAGAAATATTGAAGAGTACTTGGCAAGTGGAGATGGGCTATTCTAAGTGGGTTGATCTTGCCATTTTGTTGGGAATGGTAATTGTTTACAGGCTGATGTTTTTGGGAATAATAAAGATAAGTGAAAAGGTTGTGCCAATGATCAAAGCTCTTCTTGTTGGTGTTCCCAAACACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005319 GO:0005342 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006950 GO:0006970 GO:0007275 GO:0007389 GO:0008028 GO:0008150 GO:0008509 GO:0008514 GO:0009611 GO:0009628 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0009897 GO:0009965 GO:0009986 GO:0010016 GO:0010033 GO:0010051 GO:0010154 GO:0010222 GO:0010588 GO:0010876 GO:0015075 GO:0015245 GO:0015318 GO:0015399 GO:0015405 GO:0015711 GO:0015718 GO:0015849 GO:0015908 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0022804 GO:0022857 GO:0031224 GO:0032501 GO:0032502 GO:0033036 GO:0033993 GO:0034220 GO:0042221 GO:0042623 GO:0042626 GO:0042802 GO:0042803 GO:0043492 GO:0044425 GO:0044459 GO:0044464 GO:0046942 GO:0046943 GO:0046983 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071702 GO:0071944 GO:0080051 GO:0090698 GO:0097305 GO:0098552 GO:0098656 GO:0099402 GO:1901700 GO:1903825 GO:1905039 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

687

Amino Acids

75.61

Weight (kDa)

8.82

Isoelectric Point (pI)

40.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	133 - 280	1.1e-28	ABC transporter
ABC2_membrane	PF01061	399 - 611	4.3e-43	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0000287)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20410 FvH4_1g20410 FvH4_6g39250 FvH4_6g39250
malus_domestica	MD00G1036800.v1.1 MD05G1042600.v1.1 MD10G1049900.v1.1
prunus_persica	Prupe.6G191500_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064400_v2.0.a1
pyrus_communis	pycom05g03520 pycom10g03500 pycom10g03510 pycom15g28250
rosa_chinensis	RchiOBHm_Chr1g0336561 RchiOBHm_Chr2g0112551 RchiOBHm_Chr2g0112561 RchiOBHm_Chr2g0112631 RchiOBHm_Chr2g0112641 RchiOBHm_Chr2g0153091 RchiOBHm_Chr2g0153111 RchiOBHm_Chr2g0153141 RchiOBHm_Chr2g0153161 RchiOBHm_Chr2g0153171
rosa_laevigata	RLG00000017991 RLG00000017992 RLG00000017995 RLG00000017997 RLG00000020676 RLG00000020677 RLG00000020678 RLG00000020682
rosa_multiflora	Rmu_co8208234.1_g000001 Rmu_co8218328.1_g000001 Rmu_co8425243.1_g000001 Rmu_sc0000218.1_g000037 Rmu_sc0000218.1_g000044 Rmu_sc0000218.1_g000047 Rmu_sc0000218.1_g000052 Rmu_sc0001155.1_g000011 Rmu_sc0001155.1_g000026 Rmu_sc0001155.1_g000029 Rmu_sc0001499.1_g000001 Rmu_sc0001499.1_g000040 Rmu_sc0002401.1_g000032 Rmu_sc0002401.1_g000033 Rmu_sc0004070.1_g000003 Rmu_sc0004070.1_g000004 Rmu_sc0005547.1_g000001 Rmu_sc0006062.1_g000002 Rmu_sc0009780.1_g000005 Rmu_sc0013071.1_g000001 Rmu_sc0013071.1_g000012
rosa_roxburghii	Rroxscaffold_2G00095130 Rroxscaffold_2G00095140 Rroxscaffold_2G00095160 Rroxscaffold_2G00095180 Rroxscaffold_2G00095190 Rroxscaffold_2G00095200 Rroxscaffold_2G00131290 Rroxscaffold_2G00131320 Rroxscaffold_2G00131350
rosa_rugosa	Rorug02G0181500 Rorug02G0181500 Rorug02G0181600 Rorug02G0181700 Rorug02G0437300 Rorug02G0437400
rosa_samantha	Rh1DG154100 Rh2AG235200 Rh2AG235300 Rh2AG235400 Rh2AG235600 Rh2AG235800 Rh2AG499700 Rh2AG499800 Rh2AG500000 Rh2AG500100 Rh2AG500200 Rh2BG248500 Rh2BG248700 Rh2BG248800 Rh2BG511000 Rh2BG511200 Rh2BG511300 Rh2BG511600 Rh2CG239600 Rh2CG239700 Rh2CG239900 Rh2CG240000 Rh2CG485900 Rh2CG486000 Rh2CG486200 Rh2CG486300 Rh2CG486400 Rh2DG242500 Rh2DG242600 Rh2DG242700 Rh2DG242900 Rh2DG243100 Rh2DG522800 Rh2DG523100 Rh2DG523200 Rh2DG523500 Rh2DG523600 Rh5DG200200
rosa_wichuraiana	Rw2G018200 Rw2G018210 Rw2G018230 Rw2G018240 Rw2G041010 Rw2G041020 Rw2G041030 Rw2G041050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	82
Acc36I	ACCTGC	1 cut(s)	82
AccB1I	GGYRCC	1 cut(s)	37
AccII	CGCG	1 cut(s)	1242
AciI	CCGC	8 cut(s)	77, 213, 216, 219, 222, 532, 552, 1441
AclWI	GGATC	3 cut(s)	511, 1360, 1688
AcoI	YGGCCR	1 cut(s)	529
AcsI	RAATTY	1 cut(s)	490
AcuI	CTGAAG	1 cut(s)	1550
AfaI	GTAC	4 cut(s)	63, 310, 1781, 1906
AfiI	CCNNNNNNNGG	2 cut(s)	839, 1332
AflIII	ACRYGT	1 cut(s)	1233
AhlI	ACTAGT	1 cut(s)	836
AjiI	CACGTC	1 cut(s)	868
AjnI	CCWGG	4 cut(s)	86, 412, 1203, 1534
AjuI	GAANNNNNNNTTGG	4 cut(s)	721, 753, 803, 835
Alw21I	GWGCWC	1 cut(s)	1165
Alw26I	GTCTC	2 cut(s)	677, 758
AlwI	GGATC	3 cut(s)	511, 1360, 1688
AlwNI	CAGNNNCTG	1 cut(s)	1694
AoxI	GGCC	6 cut(s)	436, 529, 703, 1003, 1561, 1868
ApaI	GGGCCC	1 cut(s)	440
ApeKI	GCWGC	5 cut(s)	209, 224, 631, 854, 1472
ApoI	RAATTY	1 cut(s)	490
ArsI	GACNNNNNNTTYG	2 cut(s)	74, 106
AseI	ATTAAT	1 cut(s)	1074
Asp700I	GAANNNNTTC	1 cut(s)	1433
AspLEI	GCGC	1 cut(s)	631
AspS9I	GGNCC	6 cut(s)	337, 436, 437, 703, 1004, 1868
AsuC2I	CCSGG	1 cut(s)	899
AsuHPI	GGTGA	5 cut(s)	63, 368, 887, 1115, 1898
AvaII	GGWCC	1 cut(s)	337
AxyI	CCTNAGG	1 cut(s)	1127
BaeGI	GKGCMC	3 cut(s)	40, 440, 1461
BanI	GGYRCC	1 cut(s)	37
BanII	GRGCYC	2 cut(s)	440, 1165
BbsI	GAAGAC	3 cut(s)	87, 1092, 1428
Bbv12I	GWGCWC	1 cut(s)	1165
BbvI	GCAGC	5 cut(s)	196, 211, 643, 841, 1459
BccI	CCATC	7 cut(s)	27, 128, 353, 694, 896, 1040, 1915
BciT130I	CCWGG	4 cut(s)	88, 414, 1205, 1536
BciVI	GTATCC	1 cut(s)	1534
BclI	TGATCA	5 cut(s)	106, 115, 253, 522, 2028
BcnI	CCSGG	1 cut(s)	899
BcoDI	GTCTC	2 cut(s)	677, 758
BcuI	ACTAGT	1 cut(s)	836
BfaI	CTAG	8 cut(s)	21, 156, 248, 837, 845, 936, 1247, 1347
BfmI	CTRYAG	1 cut(s)	126
BfuAI	ACCTGC	1 cut(s)	82
BfuI	GTATCC	1 cut(s)	1534
BglI	GCCNNNNNGGC	1 cut(s)	444
BglII	AGATCT	1 cut(s)	1431
BmcAI	AGTACT	2 cut(s)	63, 1906
Bme1390I	CCNGG	5 cut(s)	88, 414, 899, 1205, 1536
Bme18I	GGWCC	1 cut(s)	337
BmgBI	CACGTC	1 cut(s)	868
BmgT120I	GGNCC	6 cut(s)	337, 436, 437, 703, 1004, 1868
BmiI	GGNNCC	4 cut(s)	39, 438, 556, 1324
BmrFI	CCNGG	5 cut(s)	88, 414, 899, 1205, 1536
BmrI	ACTGGG	1 cut(s)	408
BmsI	GCATC	4 cut(s)	460, 792, 929, 1382
BmuI	ACTGGG	1 cut(s)	408
BpiI	GAAGAC	3 cut(s)	87, 1092, 1428
BpmI	CTGGAG	2 cut(s)	1187, 1557
BpuMI	CCSGG	1 cut(s)	899
BsaBI	GATNNNNATC	1 cut(s)	521
BsaI	GGTCTC	1 cut(s)	758
BsaJI	CCNNGG	2 cut(s)	86, 558
BsaXI	ACNNNNNCTCC	4 cut(s)	326, 356, 1307, 1337
Bsc4I	CCNNNNNNNGG	2 cut(s)	839, 1332
Bse1I	ACTGG	2 cut(s)	403, 1262
Bse21I	CCTNAGG	1 cut(s)	1127
Bse3DI	GCAATG	2 cut(s)	1278, 1785
Bse8I	GATNNNNATC	1 cut(s)	521
BseBI	CCWGG	4 cut(s)	88, 414, 1205, 1536
BseDI	CCNNGG	2 cut(s)	86, 558
BseGI	GGATG	2 cut(s)	475, 907
BseJI	GATNNNNATC	1 cut(s)	521
BseLI	CCNNNNNNNGG	2 cut(s)	839, 1332
BseMI	GCAATG	2 cut(s)	1278, 1785
BseMII	CTCAG	3 cut(s)	769, 1053, 1141
BseNI	ACTGG	2 cut(s)	403, 1262
BseRI	GAGGAG	1 cut(s)	43
BseSI	GKGCMC	3 cut(s)	40, 440, 1461
BseXI	GCAGC	5 cut(s)	196, 211, 643, 841, 1459
BseYI	CCCAGC	1 cut(s)	1694
Bsh1236I	CGCG	1 cut(s)	1242
BshFI	GGCC	6 cut(s)	438, 531, 705, 1005, 1563, 1870
BshNI	GGYRCC	1 cut(s)	37
BsiHKAI	GWGCWC	1 cut(s)	1165
BsiSI	CCGG	1 cut(s)	898
BslFI	GGGAC	2 cut(s)	792, 1315
BslI	CCNNNNNNNGG	2 cut(s)	839, 1332
BsmAI	GTCTC	2 cut(s)	677, 758
BsmBI	CGTCTC	1 cut(s)	677
BsmFI	GGGAC	2 cut(s)	792, 1315
BsmI	GAATGC	1 cut(s)	1790
BsnI	GGCC	6 cut(s)	438, 531, 705, 1005, 1563, 1870
Bso31I	GGTCTC	1 cut(s)	758
Bsp120I	GGGCCC	1 cut(s)	436
Bsp1286I	GDGCHC	4 cut(s)	40, 440, 1165, 1461
Bsp68I	TCGCGA	1 cut(s)	1242
BspACI	CCGC	8 cut(s)	77, 213, 216, 219, 222, 532, 552, 1441
BspANI	GGCC	6 cut(s)	438, 531, 705, 1005, 1563, 1870
BspCNI	CTCAG	3 cut(s)	768, 1054, 1140
BspFNI	CGCG	1 cut(s)	1242
BspHI	TCATGA	3 cut(s)	118, 870, 1312
BspLI	GGNNCC	4 cut(s)	39, 438, 556, 1324
BspMI	ACCTGC	1 cut(s)	82
BspPI	GGATC	3 cut(s)	511, 1360, 1688
BspQI	GCTCTTC	2 cut(s)	1565, 2043
BspT107I	GGYRCC	1 cut(s)	37
BspTNI	GGTCTC	1 cut(s)	758
BsrDI	GCAATG	2 cut(s)	1278, 1785
BsrI	ACTGG	2 cut(s)	403, 1262
BssECI	CCNNGG	2 cut(s)	86, 558
Bst2UI	CCWGG	4 cut(s)	88, 414, 1205, 1536
Bst4CI	ACNGT	5 cut(s)	61, 604, 851, 913, 994
Bst6I	CTCTTC	5 cut(s)	769, 824, 1565, 1895, 2043
BstC8I	GCNNGC	3 cut(s)	707, 891, 1654
BstDEI	CTNAG	4 cut(s)	755, 1062, 1127, 1932
BstF5I	GGATG	2 cut(s)	475, 907
BstFNI	CGCG	1 cut(s)	1242
BstHHI	GCGC	1 cut(s)	631
BstMAI	GTCTC	2 cut(s)	677, 758
BstNI	CCWGG	4 cut(s)	88, 414, 1205, 1536
BstNSI	RCATGY	1 cut(s)	1237
BstSCI	CCNGG	5 cut(s)	86, 412, 897, 1203, 1534
BstSFI	CTRYAG	1 cut(s)	126
BstSLI	GKGCMC	3 cut(s)	40, 440, 1461
BstUI	CGCG	1 cut(s)	1242
BstV1I	GCAGC	5 cut(s)	196, 211, 643, 841, 1459
BstV2I	GAAGAC	3 cut(s)	87, 1092, 1428
BstX2I	RGATCY	2 cut(s)	516, 1431
BstXI	CCANNNNNNTGG	1 cut(s)	1957
BstYI	RGATCY	2 cut(s)	516, 1431
Bsu36I	CCTNAGG	1 cut(s)	1127
BsuI	GTATCC	1 cut(s)	1534
BsuRI	GGCC	6 cut(s)	438, 531, 705, 1005, 1563, 1870
BtrI	CACGTC	1 cut(s)	868
BtsCI	GGATG	2 cut(s)	475, 907
BtsI	GCAGTG	1 cut(s)	946
BtsIMutI	CAGTG	5 cut(s)	763, 856, 946, 1059, 2059
BtuMI	TCGCGA	1 cut(s)	1242
BveI	ACCTGC	1 cut(s)	82
Cac8I	GCNNGC	3 cut(s)	707, 891, 1654
CaiI	CAGNNNCTG	1 cut(s)	1694
CciI	TCATGA	3 cut(s)	118, 870, 1312
CfoI	GCGC	1 cut(s)	631
Cfr13I	GGNCC	6 cut(s)	337, 436, 437, 703, 1004, 1868
CsiI	ACCWGGT	1 cut(s)	412
Csp6I	GTAC	4 cut(s)	62, 309, 1780, 1905
CviQI	GTAC	4 cut(s)	62, 309, 1780, 1905
DdeI	CTNAG	4 cut(s)	755, 1062, 1127, 1932
DraI	TTTAAA	1 cut(s)	1113
EaeI	YGGCCR	1 cut(s)	529
Eam1104I	CTCTTC	5 cut(s)	769, 824, 1565, 1895, 2043
EarI	CTCTTC	5 cut(s)	769, 824, 1565, 1895, 2043
Ecl136II	GAGCTC	1 cut(s)	1163
Eco24I	GRGCYC	2 cut(s)	440, 1165
Eco31I	GGTCTC	1 cut(s)	758
Eco47I	GGWCC	1 cut(s)	337
Eco53kI	GAGCTC	1 cut(s)	1163
Eco57I	CTGAAG	1 cut(s)	1550
Eco81I	CCTNAGG	1 cut(s)	1127
EcoICRI	GAGCTC	1 cut(s)	1163
EcoO109I	RGGNCCY	2 cut(s)	337, 437
EcoRII	CCWGG	4 cut(s)	86, 412, 1203, 1534
EcoT38I	GRGCYC	2 cut(s)	440, 1165
Esp3I	CGTCTC	1 cut(s)	677
FalI	AAGNNNNNCTT	8 cut(s)	271, 303, 528, 560, 803, 835, 2025, 2057
FaqI	GGGAC	2 cut(s)	792, 1315
FauI	CCCGC	1 cut(s)	1434
FauNDI	CATATG	2 cut(s)	565, 1477
FbaI	TGATCA	5 cut(s)	106, 115, 253, 522, 2028
FokI	GGATG	2 cut(s)	482, 914
FriOI	GRGCYC	2 cut(s)	440, 1165
FspBI	CTAG	8 cut(s)	21, 156, 248, 837, 845, 936, 1247, 1347
GlaI	GCGC	1 cut(s)	630
GsaI	CCCAGC	1 cut(s)	1698
GsuI	CTGGAG	2 cut(s)	1187, 1557
HaeIII	GGCC	6 cut(s)	438, 531, 705, 1005, 1563, 1870
HapII	CCGG	1 cut(s)	898
HhaI	GCGC	1 cut(s)	631
Hin6I	GCGC	1 cut(s)	629
HinP1I	GCGC	1 cut(s)	629
HindIII	AAGCTT	1 cut(s)	812
HinfI	GANTC	8 cut(s)	5, 122, 713, 802, 1097, 1404, 1699, 1815
HpaII	CCGG	1 cut(s)	898
HphI	GGTGA	5 cut(s)	63, 368, 887, 1115, 1898
Hpy166II	GTNNAC	4 cut(s)	764, 1123, 1231, 1975
Hpy188I	TCNGA	3 cut(s)	1569, 1620, 1755
Hpy188III	TCNNGA	8 cut(s)	119, 520, 799, 871, 1166, 1241, 1313, 1381
Hpy8I	GTNNAC	4 cut(s)	764, 1123, 1231, 1975
HpyAV	CCTTC	9 cut(s)	450, 477, 664, 900, 983, 1165, 1419, 1574, 1829
HpyCH4III	ACNGT	5 cut(s)	61, 604, 851, 913, 994
HpyCH4IV	ACGT	1 cut(s)	867
HpyF3I	CTNAG	4 cut(s)	755, 1062, 1127, 1932
HpySE526I	ACGT	1 cut(s)	867
HspAI	GCGC	1 cut(s)	629
Ksp22I	TGATCA	5 cut(s)	106, 115, 253, 522, 2028
LguI	GCTCTTC	2 cut(s)	1565, 2043
LmnI	GCTCC	6 cut(s)	56, 639, 741, 1160, 1328, 1538
Lsp1109I	GCAGC	5 cut(s)	196, 211, 643, 841, 1459
LweI	GCATC	4 cut(s)	460, 792, 929, 1382
MabI	ACCWGGT	1 cut(s)	412
MaeI	CTAG	8 cut(s)	21, 156, 248, 837, 845, 936, 1247, 1347
MaeII	ACGT	1 cut(s)	867
MaeIII	GTNAC	2 cut(s)	243, 568
MfeI	CAATTG	2 cut(s)	1395, 1542
MflI	RGATCY	2 cut(s)	516, 1431
MhlI	GDGCHC	4 cut(s)	40, 440, 1165, 1461
MluCI	AATT	9 cut(s)	490, 915, 924, 1071, 1272, 1395, 1530, 1542, 1968
MlyI	GAGTC	4 cut(s)	14, 707, 796, 1106
MmeI	TCCRAC	4 cut(s)	328, 661, 719, 1465
MroXI	GAANNNNTTC	1 cut(s)	1433
MseI	TTAA	6 cut(s)	237, 599, 1074, 1112, 1451, 1529
MslI	CAYNNNNRTG	3 cut(s)	587, 900, 1800
MspA1I	CMGCKG	1 cut(s)	224
MspI	CCGG	1 cut(s)	898
MspR9I	CCNGG	5 cut(s)	88, 414, 899, 1205, 1536
MunI	CAATTG	2 cut(s)	1395, 1542
Mva1269I	GAATGC	1 cut(s)	1790
MvaI	CCWGG	4 cut(s)	88, 414, 1205, 1536
MvnI	CGCG	1 cut(s)	1242
NciI	CCSGG	1 cut(s)	899
NdeI	CATATG	2 cut(s)	565, 1477
NlaIV	GGNNCC	4 cut(s)	39, 438, 556, 1324
NmeAIII	GCCGAG	2 cut(s)	539, 605
NmuCI	GTSAC	2 cut(s)	243, 568
NruI	TCGCGA	1 cut(s)	1242
NspI	RCATGY	1 cut(s)	1237
PagI	TCATGA	3 cut(s)	118, 870, 1312
PaqCI	CACCTGC	1 cut(s)	82
PciI	ACATGT	1 cut(s)	1233
PciSI	GCTCTTC	2 cut(s)	1565, 2043
PctI	GAATGC	1 cut(s)	1790
PdmI	GAANNNNTTC	1 cut(s)	1433
PfeI	GAWTC	4 cut(s)	122, 1404, 1699, 1815
PfoI	TCCNGGA	1 cut(s)	1534
PleI	GAGTC	4 cut(s)	13, 707, 796, 1105
PpsI	GAGTC	4 cut(s)	13, 707, 796, 1105
PpuMI	RGGWCCY	1 cut(s)	337
PscI	ACATGT	1 cut(s)	1233
PshBI	ATTAAT	1 cut(s)	1074
Psp124BI	GAGCTC	1 cut(s)	1165
Psp5II	RGGWCCY	1 cut(s)	337
Psp6I	CCWGG	4 cut(s)	86, 412, 1203, 1534
PspFI	CCCAGC	1 cut(s)	1694
PspGI	CCWGG	4 cut(s)	86, 412, 1203, 1534
PspN4I	GGNNCC	4 cut(s)	39, 438, 556, 1324
PspOMI	GGGCCC	1 cut(s)	436
PspPI	GGNCC	6 cut(s)	337, 436, 437, 703, 1004, 1868
PspPPI	RGGWCCY	1 cut(s)	337
PstNI	CAGNNNCTG	1 cut(s)	1694
PsuI	RGATCY	2 cut(s)	516, 1431
RruI	TCGCGA	1 cut(s)	1242
RsaI	GTAC	4 cut(s)	63, 310, 1781, 1906
RsaNI	GTAC	4 cut(s)	62, 309, 1780, 1905
RseI	CAYNNNNRTG	3 cut(s)	587, 900, 1800
SacI	GAGCTC	1 cut(s)	1165
SapI	GCTCTTC	2 cut(s)	1565, 2043
SaqAI	TTAA	6 cut(s)	237, 599, 1074, 1112, 1451, 1529
Sau96I	GGNCC	6 cut(s)	337, 436, 437, 703, 1004, 1868
ScaI	AGTACT	2 cut(s)	63, 1906
SchI	GAGTC	4 cut(s)	14, 707, 796, 1106
ScrFI	CCNGG	5 cut(s)	88, 414, 899, 1205, 1536
SduI	GDGCHC	4 cut(s)	40, 440, 1165, 1461
SexAI	ACCWGGT	1 cut(s)	412
SfaNI	GCATC	4 cut(s)	460, 792, 929, 1382
SfcI	CTRYAG	1 cut(s)	126
SinI	GGWCC	1 cut(s)	337
SmiMI	CAYNNNNRTG	3 cut(s)	587, 900, 1800
SpeI	ACTAGT	1 cut(s)	836
Sse9I	AATT	9 cut(s)	490, 915, 924, 1071, 1272, 1395, 1530, 1542, 1968
SsiI	CCGC	8 cut(s)	77, 213, 216, 219, 222, 532, 552, 1441
SspI	AATATT	2 cut(s)	1078, 1896
SspMI	CTAG	8 cut(s)	21, 156, 248, 837, 845, 936, 1247, 1347
SstI	GAGCTC	1 cut(s)	1165
StyD4I	CCNGG	5 cut(s)	86, 412, 897, 1203, 1534
TaaI	ACNGT	5 cut(s)	61, 604, 851, 913, 994
TaiI	ACGT	1 cut(s)	870
TaqI	TCGA	3 cut(s)	656, 1032, 1264
TasI	AATT	9 cut(s)	490, 915, 924, 1071, 1272, 1395, 1530, 1542, 1968
TatI	WGTACW	3 cut(s)	61, 1779, 1904
TauI	GCSGC	5 cut(s)	215, 218, 221, 224, 534
TfiI	GAWTC	4 cut(s)	122, 1404, 1699, 1815
Tru1I	TTAA	6 cut(s)	237, 599, 1074, 1112, 1451, 1529
Tru9I	TTAA	6 cut(s)	237, 599, 1074, 1112, 1451, 1529
TscAI	CASTG	4 cut(s)	763, 856, 946, 1066
TseFI	GTSAC	2 cut(s)	243, 568
TseI	GCWGC	5 cut(s)	209, 224, 631, 854, 1472
Tsp45I	GTSAC	2 cut(s)	243, 568
TspDTI	ATGAA	7 cut(s)	734, 887, 917, 1180, 1301, 1378, 1442
TspGWI	ACGGA	1 cut(s)	1724
TspRI	CASTG	4 cut(s)	763, 856, 946, 1066
VpaK11BI	GGWCC	1 cut(s)	337
VspI	ATTAAT	1 cut(s)	1074
XapI	RAATTY	1 cut(s)	490
XceI	RCATGY	1 cut(s)	1237
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1154
XmnI	GAANNNNTTC	1 cut(s)	1433
XspI	CTAG	8 cut(s)	21, 156, 248, 837, 845, 936, 1247, 1347
ZrmI	AGTACT	2 cut(s)	63, 1906

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.