Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0000287

Physical Location & Seq

Genomic Coordinates Forward (+)

31039946 .. 31045024

Gene Structure 5079 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g39250.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

ATGTGCGTCTCTCGAGCTCACTTAATTAAGGACTGTCTAGATCTTCTTATGGCTTCAGTTACATTTCATTCTAATGTTCAGCTTATTACTTATATTCATGAAAATGAATATGGTTATCATCCCAGTAATCGCTCTGGAGTCGAGGAGGTTGAAACGGTTGCTAGAGAAGATGCGGTAGTGATAGAAGATTCCATTCGAAACCGAAACCATATAAAGATTCCGGTGATCGAAAATGATGAGGGTATCTTCTTGACATGGGAAGATCTGTGGGTGAGAGTAGCTTCAAACTTAAATGAGAGAGAAAAGCATAGCAGTGATGAAAGAAACTGCAGATCAATCCTCCGAGGGGTAACTGGTTGTGCCAAACCAGGGCAGCTCTTGGCTATAATGGGTCCTTCTGGTTGTGGCAAATCTACTCTTCTTGATGCTTTAGCAGGTAGATTGAGTTCAAACACAAGGCAGACAGGGGATATCCTAATAAATGGACATAAACAAGCACTAGCTTATGGAACTTCGGCATATGTGACACAAGATGACACTCTGATGACCACATTAACGGTGAAAGAAGCTGTATACTATTCTGCTCAACTGCAGTTACCAGATTCAATGACTATGTTGAAGAAGATAGAGAGAGCACAAGTGACTATAAGAGAGATGGGTCTGCAAAATGTCATGAACACAAGGATCGGAGGTTGGGGAGCCAAGGGCCTCAGTGGTGGAGAGAAAAGAAGAGTCAGCATCTGCATTGAGCTTCTTACACAACCAAAACTTCTCTTTTTGGATGAACCAACAAGCGGACTTGACAGCGCTGCGTCTTATTATGTCATGAGCAGAATTGCAAATCTTGGTCATAAATCGTCTCAGAGGACCATAGTTGCTTCCATCCATCAGCCTAGCTACGAAGTCTTTCAACTGTTTGACAATCTTTGTCTCCTGTCTTGTGGTGAAACTGTATATTTTGGTCCAGCTTCTGCAGCAAATGAATTTTTTGCTGCATGTGGTTGTCCATGTCCACCTCTCCTATATCCATCAGATCACTTTCTCAAGACCATAAACAAAGATTTTGAGCTGGGTTTAGCGGGAAGGACACCCACAGAGGAAGCTATTCATACGCTGATCAAGTCTTATAAAACATCTGATAATTATCGCCAACTTCAAATACAGATATCTGAAATATACAAAAAGGATTGTGAAGCATCAGAAAAGAGAAGTCATGCTGGCTTTCTCACACAATGTTTCGTGCTTACAAGAAGATCCTTTGTGAATATGTACCGTGATCGAGGCTACTACTGGTTGCGCCTTTTCATCTACATAGCCTTAGCTGCCGGCCTAGGCACTATCTATTATGATCTTGGATATACTTTTGCATCAATTCAGGCACGAGGCTCTCTACTAGCATTTGTGGTTTCATTTCTAACCTTCATGGCCATTGGTGGGTTTCCTTCCTTCGTGGAAGACATGAAGGTATTTGAACGTGAAAGGCTGAACGGCCACTATGGTGTTATTGCATTTGTCTTCGCCAACACATTTTCTTCGATGCCTTTGTTGATGTTGATTTCACTGATTCCTGGGGCAACAATCTACTACCTTGCTCGACTGCACAGTGGATTTGAACACTTCTTCTACTTTGCTTCTGCGCTATTTGCTTGCATGATGCTTGTTGAGAGCCTTATGATGATAGTTGCGAGCATCGTGCCGAATTTCCTAATGGGCATAATAGTTGGTTCTGGATTGCAAGGGATTATGTTGTTATGCGGCGGCTACTTCCGGCTACCAAATGATCTTCCAAATCTTGTGTGGAAATACCCGTTGTACCATATTGCCTTCCACAAGTACGCATTCCAGGGAATGTTTAAGAATGAATTTGAAGGAACAACGTTTCCGAATGCTCAACTTGGAATCGGTAATAACTCTAAGAAGCTTAGTGGCGAACGCATTCTGAGAGATATACTGCAGGTGGAAATGGGTTACTCTAAATGGGTTGATCTTGGTGTCTTGCTAGGAATGATAGTTCTGTATCGAGCTTTATTCTTGGTTATTATCAAGATCAATGAGAAAGGGAAAACCATTACCTTTGCACTTCTCTCTGTCGCTCCCAAGCGAAGCATGCAAGTATTGGTGAATCCCTCCTCTATTCCATTGCATGGGGAGAGCGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005319 GO:0005342 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006950 GO:0006970 GO:0007275 GO:0007389 GO:0008028 GO:0008150 GO:0008509 GO:0008514 GO:0009611 GO:0009628 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0009897 GO:0009965 GO:0009986 GO:0010016 GO:0010033 GO:0010051 GO:0010154 GO:0010222 GO:0010588 GO:0010876 GO:0015075 GO:0015245 GO:0015318 GO:0015399 GO:0015405 GO:0015711 GO:0015718 GO:0015849 GO:0015908 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0022804 GO:0022857 GO:0031224 GO:0032501 GO:0032502 GO:0033036 GO:0033993 GO:0034220 GO:0042221 GO:0042623 GO:0042626 GO:0042802 GO:0042803 GO:0043492 GO:0044425 GO:0044459 GO:0044464 GO:0046942 GO:0046943 GO:0046983 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071702 GO:0071944 GO:0080051 GO:0090698 GO:0097305 GO:0098552 GO:0098656 GO:0099402 GO:1901700 GO:1903825 GO:1905039 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

720

Amino Acids

80.4

Weight (kDa)

7.84

Isoelectric Point (pI)

37.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	114 - 265	1.9e-27	ABC transporter
SMC_N	PF02463	125 - 301	4.2e-06	RecF/RecN/SMC N terminal domain
ABC2_membrane_7	PF19055	296 - 351	1e-09	ABC-2 type transporter
ABC2_membrane	PF01061	414 - 626	7.9e-40	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000287)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20410 FvH4_1g20410 FvH4_6g39250 FvH4_6g39250
malus_domestica	MD00G1036800.v1.1 MD05G1042600.v1.1 MD10G1049900.v1.1
prunus_persica	Prupe.6G191500_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064400_v2.0.a1
pyrus_communis	pycom05g03520 pycom10g03500 pycom10g03510 pycom15g28250
rosa_chinensis	RchiOBHm_Chr1g0336561 RchiOBHm_Chr2g0112551 RchiOBHm_Chr2g0112561 RchiOBHm_Chr2g0112631 RchiOBHm_Chr2g0112641 RchiOBHm_Chr2g0153091 RchiOBHm_Chr2g0153111 RchiOBHm_Chr2g0153141 RchiOBHm_Chr2g0153161 RchiOBHm_Chr2g0153171
rosa_laevigata	RLG00000017991 RLG00000017992 RLG00000017995 RLG00000017997 RLG00000020676 RLG00000020677 RLG00000020678 RLG00000020682
rosa_multiflora	Rmu_co8208234.1_g000001 Rmu_co8218328.1_g000001 Rmu_co8425243.1_g000001 Rmu_sc0000218.1_g000037 Rmu_sc0000218.1_g000044 Rmu_sc0000218.1_g000047 Rmu_sc0000218.1_g000052 Rmu_sc0001155.1_g000011 Rmu_sc0001155.1_g000026 Rmu_sc0001155.1_g000029 Rmu_sc0001499.1_g000001 Rmu_sc0001499.1_g000040 Rmu_sc0002401.1_g000032 Rmu_sc0002401.1_g000033 Rmu_sc0004070.1_g000003 Rmu_sc0004070.1_g000004 Rmu_sc0005547.1_g000001 Rmu_sc0006062.1_g000002 Rmu_sc0009780.1_g000005 Rmu_sc0013071.1_g000001 Rmu_sc0013071.1_g000012
rosa_roxburghii	Rroxscaffold_2G00095130 Rroxscaffold_2G00095140 Rroxscaffold_2G00095160 Rroxscaffold_2G00095180 Rroxscaffold_2G00095190 Rroxscaffold_2G00095200 Rroxscaffold_2G00131290 Rroxscaffold_2G00131320 Rroxscaffold_2G00131350
rosa_rugosa	Rorug02G0181500 Rorug02G0181500 Rorug02G0181600 Rorug02G0181700 Rorug02G0437300 Rorug02G0437400
rosa_samantha	Rh1DG154100 Rh2AG235200 Rh2AG235300 Rh2AG235400 Rh2AG235600 Rh2AG235800 Rh2AG499700 Rh2AG499800 Rh2AG500000 Rh2AG500100 Rh2AG500200 Rh2BG248500 Rh2BG248700 Rh2BG248800 Rh2BG511000 Rh2BG511200 Rh2BG511300 Rh2BG511600 Rh2CG239600 Rh2CG239700 Rh2CG239900 Rh2CG240000 Rh2CG485900 Rh2CG486000 Rh2CG486200 Rh2CG486300 Rh2CG486400 Rh2DG242500 Rh2DG242600 Rh2DG242700 Rh2DG242900 Rh2DG243100 Rh2DG522800 Rh2DG523100 Rh2DG523200 Rh2DG523500 Rh2DG523600 Rh5DG200200
rosa_wichuraiana	Rw2G018200 Rw2G018210 Rw2G018230 Rw2G018240 Rw2G041010 Rw2G041020 Rw2G041030 Rw2G041050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1128
AarI	CACCTGC	1 cut(s)	1945
Acc36I	ACCTGC	2 cut(s)	425, 1945
AccB7I	CCANNNNNTGG	1 cut(s)	2144
AccI	GTMKAC	1 cut(s)	573
AciI	CCGC	5 cut(s)	173, 795, 1079, 1755, 1758
AclI	AACGTT	1 cut(s)	1877
AclWI	GGATC	2 cut(s)	692, 1248
AcoI	YGGCCR	2 cut(s)	1425, 1489
AcsI	RAATTY	3 cut(s)	983, 1699, 1862
AcuI	CTGAAG	1 cut(s)	39
AfaI	GTAC	3 cut(s)	1271, 1814, 1835
AfeI	AGCGCT	1 cut(s)	808
AfiI	CCNNNNNNNGG	5 cut(s)	346, 369, 794, 1434, 2144
AjnI	CCWGG	3 cut(s)	367, 1567, 1842
AleI	CACNNNNGTG	1 cut(s)	1497
AloI	GAACNNNNNNTCC	4 cut(s)	1864, 1896, 1995, 2027
Alw21I	GWGCWC	2 cut(s)	19, 637
Alw26I	GTCTC	3 cut(s)	13, 864, 935
AlwI	GGATC	2 cut(s)	692, 1248
AlwNI	CAGNNNCTG	2 cut(s)	741, 971
Ama87I	CYCGRG	1 cut(s)	12
Aor51HI	AGCGCT	1 cut(s)	808
AoxI	GGCC	4 cut(s)	706, 1327, 1425, 1489
ApeKI	GCWGC	5 cut(s)	373, 809, 974, 992, 1322
ApoI	RAATTY	3 cut(s)	983, 1699, 1862
Asp700I	GAANNNNTTC	3 cut(s)	906, 1104, 1935
AspA2I	CCTAGG	1 cut(s)	1330
AspLEI	GCGC	3 cut(s)	809, 1299, 1639
AspS9I	GGNCC	4 cut(s)	392, 706, 867, 962
AsuHPI	GGTGA	5 cut(s)	235, 283, 571, 956, 2131
AsuII	TTCGAA	1 cut(s)	196
AvaI	CYCGRG	1 cut(s)	12
AvaII	GGWCC	3 cut(s)	392, 867, 962
AvrII	CCTAGG	1 cut(s)	1330
BalI	TGGCCA	1 cut(s)	1427
BanII	GRGCYC	1 cut(s)	19
BauI	CACGAG	1 cut(s)	1380
BbsI	GAAGAC	2 cut(s)	1461, 1507
Bbv12I	GWGCWC	2 cut(s)	19, 637
BbvI	GCAGC	5 cut(s)	385, 796, 979, 986, 1309
BccI	CCATC	4 cut(s)	649, 890, 894, 1036
BceAI	ACGGC	1 cut(s)	1504
BcgI	CGANNNNNNTGC	2 cut(s)	1675, 1709
BciT130I	CCWGG	3 cut(s)	369, 1569, 1844
BclI	TGATCA	1 cut(s)	1116
BcoDI	GTCTC	3 cut(s)	13, 864, 935
BfaI	CTAG	7 cut(s)	38, 162, 500, 894, 1331, 1394, 2000
BfmI	CTRYAG	4 cut(s)	328, 590, 972, 1952
BfoI	RGCGCY	1 cut(s)	810
BfuAI	ACCTGC	2 cut(s)	425, 1945
BglII	AGATCT	2 cut(s)	40, 262
BisI	GCNGC	7 cut(s)	374, 810, 975, 993, 1323, 1756, 1759
BlnI	CCTAGG	1 cut(s)	1330
BlsI	GCNGC	7 cut(s)	375, 811, 976, 994, 1324, 1757, 1760
Bme1390I	CCNGG	3 cut(s)	369, 1569, 1844
Bme18I	GGWCC	3 cut(s)	392, 867, 962
BmeT110I	CYCGRG	1 cut(s)	12
BmgT120I	GGNCC	4 cut(s)	392, 706, 867, 962
BmiI	GGNNCC	2 cut(s)	393, 700
BmrFI	CCNGG	3 cut(s)	369, 1569, 1844
BmrI	ACTGGG	1 cut(s)	117
BmsI	GCATC	8 cut(s)	160, 415, 747, 1205, 1376, 1527, 1644, 1698
BmuI	ACTGGG	1 cut(s)	117
BpiI	GAAGAC	2 cut(s)	1461, 1507
BpmI	CTGGAG	1 cut(s)	156
Bpu10I	CCTNAGC	1 cut(s)	1318
Bpu14I	TTCGAA	1 cut(s)	196
BpuEI	CTTGAG	1 cut(s)	1028
BsaBI	GATNNNNATC	1 cut(s)	1143
BsaJI	CCNNGG	6 cut(s)	343, 368, 702, 1330, 1568, 1843
BsaWI	WCCGGW	1 cut(s)	220
Bsc4I	CCNNNNNNNGG	5 cut(s)	346, 369, 794, 1434, 2144
Bse118I	RCCGGY	1 cut(s)	1325
Bse1I	ACTGG	3 cut(s)	123, 358, 1295
Bse3DI	GCAATG	1 cut(s)	2138
Bse8I	GATNNNNATC	1 cut(s)	1143
BseBI	CCWGG	3 cut(s)	369, 1569, 1844
BseDI	CCNNGG	6 cut(s)	343, 368, 702, 1330, 1568, 1843
BseGI	GGATG	3 cut(s)	118, 787, 882
BseJI	GATNNNNATC	1 cut(s)	1143
BseLI	CCNNNNNNNGG	5 cut(s)	346, 369, 794, 1434, 2144
BseMI	GCAATG	1 cut(s)	2138
BseMII	CTCAG	3 cut(s)	724, 875, 1931
BseNI	ACTGG	3 cut(s)	123, 358, 1295
BseRI	GAGGAG	2 cut(s)	158, 2119
BseXI	GCAGC	5 cut(s)	385, 796, 979, 986, 1309
BseYI	CCCAGC	1 cut(s)	1069
BsgI	GTGCAG	1 cut(s)	1583
BshFI	GGCC	4 cut(s)	708, 1329, 1427, 1491
BsiHKAI	GWGCWC	2 cut(s)	19, 637
BsiHKCI	CYCGRG	1 cut(s)	12
BsiSI	CCGG	3 cut(s)	221, 1326, 1768
BslI	CCNNNNNNNGG	5 cut(s)	346, 369, 794, 1434, 2144
BsmAI	GTCTC	3 cut(s)	13, 864, 935
BsmBI	CGTCTC	2 cut(s)	13, 864
BsmI	GAATGC	3 cut(s)	1838, 1891, 1935
BsnI	GGCC	4 cut(s)	708, 1329, 1427, 1491
BsoBI	CYCGRG	1 cut(s)	12
Bsp119I	TTCGAA	1 cut(s)	196
Bsp1286I	GDGCHC	2 cut(s)	19, 637
BspACI	CCGC	5 cut(s)	173, 795, 1079, 1755, 1758
BspANI	GGCC	4 cut(s)	708, 1329, 1427, 1491
BspCNI	CTCAG	3 cut(s)	723, 874, 1932
BspHI	TCATGA	3 cut(s)	97, 672, 825
BspLI	GGNNCC	2 cut(s)	393, 700
BspMAI	CTGCAG	4 cut(s)	332, 594, 976, 1956
BspMI	ACCTGC	2 cut(s)	425, 1945
BspPI	GGATC	2 cut(s)	692, 1248
BspT104I	TTCGAA	1 cut(s)	196
BsrDI	GCAATG	1 cut(s)	2138
BsrFI	RCCGGY	1 cut(s)	1325
BsrI	ACTGG	3 cut(s)	123, 358, 1295
BssAI	RCCGGY	1 cut(s)	1325
BssECI	CCNNGG	6 cut(s)	343, 368, 702, 1330, 1568, 1843
BssNAI	GTATAC	1 cut(s)	574
BssSI	CACGAG	1 cut(s)	1380
BssT1I	CCWWGG	2 cut(s)	702, 1330
Bst1107I	GTATAC	1 cut(s)	574
Bst2BI	CACGAG	1 cut(s)	1380
Bst2UI	CCWGG	3 cut(s)	369, 1569, 1844
Bst4CI	ACNGT	7 cut(s)	35, 157, 559, 915, 952, 1274, 1604
Bst6I	CTCTTC	2 cut(s)	423, 724
BstBI	TTCGAA	1 cut(s)	196
BstC8I	GCNNGC	5 cut(s)	1219, 1327, 1648, 1687, 2108
BstDEI	CTNAG	6 cut(s)	710, 861, 1318, 1914, 1922, 1940
BstF5I	GGATG	3 cut(s)	118, 787, 882
BstH2I	RGCGCY	1 cut(s)	810
BstHHI	GCGC	3 cut(s)	809, 1299, 1639
BstMAI	GTCTC	3 cut(s)	13, 864, 935
BstMWI	GCNNNNNNNGC	4 cut(s)	974, 1322, 1643, 2107
BstNI	CCWGG	3 cut(s)	369, 1569, 1844
BstNSI	RCATGY	2 cut(s)	999, 2110
BstSCI	CCNGG	3 cut(s)	367, 1567, 1842
BstSFI	CTRYAG	4 cut(s)	328, 590, 972, 1952
BstV1I	GCAGC	5 cut(s)	385, 796, 979, 986, 1309
BstV2I	GAAGAC	2 cut(s)	1461, 1507
BstX2I	RGATCY	3 cut(s)	40, 262, 1253
BstYI	RGATCY	3 cut(s)	40, 262, 1253
BstZ17I	GTATAC	1 cut(s)	574
BsuRI	GGCC	4 cut(s)	708, 1329, 1427, 1491
BtsCI	GGATG	3 cut(s)	118, 787, 882
BtsI	GCAGTG	1 cut(s)	319
BtsIMutI	CAGTG	4 cut(s)	319, 718, 1559, 1609
BveI	ACCTGC	2 cut(s)	425, 1945
Cac8I	GCNNGC	5 cut(s)	1219, 1327, 1648, 1687, 2108
CaiI	CAGNNNCTG	2 cut(s)	741, 971
CciI	TCATGA	3 cut(s)	97, 672, 825
CfoI	GCGC	3 cut(s)	809, 1299, 1639
Cfr10I	RCCGGY	1 cut(s)	1325
Cfr13I	GGNCC	4 cut(s)	392, 706, 867, 962
CseI	GACGC	1 cut(s)	801
Csp6I	GTAC	3 cut(s)	1270, 1813, 1834
CviQI	GTAC	3 cut(s)	1270, 1813, 1834
DdeI	CTNAG	6 cut(s)	710, 861, 1318, 1914, 1922, 1940
EaeI	YGGCCR	2 cut(s)	1425, 1489
Eam1104I	CTCTTC	2 cut(s)	423, 724
EarI	CTCTTC	2 cut(s)	423, 724
Ecl136II	GAGCTC	1 cut(s)	17
Eco130I	CCWWGG	2 cut(s)	702, 1330
Eco24I	GRGCYC	1 cut(s)	19
Eco32I	GATATC	2 cut(s)	472, 1167
Eco47I	GGWCC	3 cut(s)	392, 867, 962
Eco47III	AGCGCT	1 cut(s)	808
Eco53kI	GAGCTC	1 cut(s)	17
Eco57I	CTGAAG	1 cut(s)	39
Eco88I	CYCGRG	1 cut(s)	12
EcoICRI	GAGCTC	1 cut(s)	17
EcoO109I	RGGNCCY	2 cut(s)	392, 706
EcoRII	CCWGG	3 cut(s)	367, 1567, 1842
EcoRV	GATATC	2 cut(s)	472, 1167
EcoT14I	CCWWGG	2 cut(s)	702, 1330
EcoT38I	GRGCYC	1 cut(s)	19
ErhI	CCWWGG	2 cut(s)	702, 1330
Esp3I	CGTCTC	2 cut(s)	13, 864
FauI	CCCGC	1 cut(s)	1072
FauNDI	CATATG	1 cut(s)	520
FbaI	TGATCA	1 cut(s)	1116
FblI	GTMKAC	1 cut(s)	573
Fnu4HI	GCNGC	7 cut(s)	374, 810, 975, 993, 1323, 1756, 1759
FokI	GGATG	3 cut(s)	105, 794, 869
FriOI	GRGCYC	1 cut(s)	19
Fsp4HI	GCNGC	7 cut(s)	374, 810, 975, 993, 1323, 1756, 1759
FspBI	CTAG	7 cut(s)	38, 162, 500, 894, 1331, 1394, 2000
GlaI	GCGC	3 cut(s)	808, 1298, 1638
GluI	GCNGC	7 cut(s)	374, 810, 975, 993, 1323, 1756, 1759
GsaI	CCCAGC	1 cut(s)	1073
GsuI	CTGGAG	1 cut(s)	156
HaeII	RGCGCY	1 cut(s)	810
HaeIII	GGCC	4 cut(s)	708, 1329, 1427, 1491
HapII	CCGG	3 cut(s)	221, 1326, 1768
HgaI	GACGC	1 cut(s)	801
HhaI	GCGC	3 cut(s)	809, 1299, 1639
Hin6I	GCGC	3 cut(s)	807, 1297, 1637
HinP1I	GCGC	3 cut(s)	807, 1297, 1637
HindIII	AAGCTT	1 cut(s)	1919
HinfI	GANTC	8 cut(s)	138, 188, 217, 602, 732, 1564, 1899, 2122
HpaII	CCGG	3 cut(s)	221, 1326, 1768
HphI	GGTGA	5 cut(s)	235, 283, 571, 956, 2131
Hpy166II	GTNNAC	2 cut(s)	574, 1013
Hpy8I	GTNNAC	2 cut(s)	574, 1013
HpyAV	CCTTC	8 cut(s)	405, 1077, 1429, 1452, 1456, 1456, 1834, 1862
HpyCH4III	ACNGT	7 cut(s)	35, 157, 559, 915, 952, 1274, 1604
HpyCH4IV	ACGT	2 cut(s)	1474, 1877
HpyF10VI	GCNNNNNNNGC	4 cut(s)	974, 1322, 1643, 2107
HpyF3I	CTNAG	6 cut(s)	710, 861, 1318, 1914, 1922, 1940
HpySE526I	ACGT	2 cut(s)	1474, 1877
HspAI	GCGC	3 cut(s)	807, 1297, 1637
KroI	GCCGGC	1 cut(s)	1325
KroNI	GCCGGC	1 cut(s)	1327
Ksp22I	TGATCA	1 cut(s)	1116
LmnI	GCTCC	2 cut(s)	698, 2098
Lsp1109I	GCAGC	5 cut(s)	385, 796, 979, 986, 1309
LweI	GCATC	8 cut(s)	160, 415, 747, 1205, 1376, 1527, 1644, 1698
MaeI	CTAG	7 cut(s)	38, 162, 500, 894, 1331, 1394, 2000
MaeII	ACGT	2 cut(s)	1474, 1877
MaeIII	GTNAC	6 cut(s)	58, 349, 523, 594, 640, 1967
MflI	RGATCY	3 cut(s)	40, 262, 1253
MhlI	GDGCHC	2 cut(s)	19, 637
MlsI	TGGCCA	1 cut(s)	1427
MluCI	AATT	7 cut(s)	24, 834, 983, 1141, 1371, 1699, 1862
MluNI	TGGCCA	1 cut(s)	1427
MlyI	GAGTC	2 cut(s)	147, 741
Mox20I	TGGCCA	1 cut(s)	1427
MroNI	GCCGGC	1 cut(s)	1325
MroXI	GAANNNNTTC	3 cut(s)	906, 1104, 1935
MscI	TGGCCA	1 cut(s)	1427
MseI	TTAA	5 cut(s)	23, 27, 290, 554, 1854
MslI	CAYNNNNRTG	5 cut(s)	72, 102, 312, 542, 1497
Msp20I	TGGCCA	1 cut(s)	1427
MspI	CCGG	3 cut(s)	221, 1326, 1768
MspR9I	CCNGG	3 cut(s)	369, 1569, 1844
Mva1269I	GAATGC	3 cut(s)	1838, 1891, 1935
MvaI	CCWGG	3 cut(s)	369, 1569, 1844
MwoI	GCNNNNNNNGC	4 cut(s)	974, 1322, 1643, 2107
NaeI	GCCGGC	1 cut(s)	1327
NdeI	CATATG	1 cut(s)	520
NgoMIV	GCCGGC	1 cut(s)	1325
NlaIV	GGNNCC	2 cut(s)	393, 700
NmuCI	GTSAC	2 cut(s)	523, 640
NspI	RCATGY	2 cut(s)	999, 2110
NspV	TTCGAA	1 cut(s)	196
OliI	CACNNNNGTG	1 cut(s)	1497
PacI	TTAATTAA	1 cut(s)	27
PaeI	GCATGC	1 cut(s)	2110
PaeR7I	CTCGAG	1 cut(s)	12
PagI	TCATGA	3 cut(s)	97, 672, 825
PaqCI	CACCTGC	1 cut(s)	1945
PctI	GAATGC	3 cut(s)	1838, 1891, 1935
PdiI	GCCGGC	1 cut(s)	1327
PdmI	GAANNNNTTC	3 cut(s)	906, 1104, 1935
PfeI	GAWTC	6 cut(s)	188, 217, 602, 1564, 1899, 2122
PflMI	CCANNNNNTGG	1 cut(s)	2144
PkrI	GCNGC	7 cut(s)	375, 811, 976, 994, 1324, 1757, 1760
PleI	GAGTC	2 cut(s)	146, 740
PpsI	GAGTC	2 cut(s)	146, 740
PpuMI	RGGWCCY	1 cut(s)	392
PsiI	TTATAA	1 cut(s)	1128
Psp124BI	GAGCTC	1 cut(s)	19
Psp1406I	AACGTT	1 cut(s)	1877
Psp5II	RGGWCCY	1 cut(s)	392
Psp6I	CCWGG	3 cut(s)	367, 1567, 1842
PspFI	CCCAGC	1 cut(s)	1069
PspGI	CCWGG	3 cut(s)	367, 1567, 1842
PspN4I	GGNNCC	2 cut(s)	393, 700
PspPI	GGNCC	4 cut(s)	392, 706, 867, 962
PspPPI	RGGWCCY	1 cut(s)	392
PsrI	GAACNNNNNNTAC	2 cut(s)	430, 462
PstI	CTGCAG	4 cut(s)	332, 594, 976, 1956
PstNI	CAGNNNCTG	2 cut(s)	741, 971
PsuI	RGATCY	3 cut(s)	40, 262, 1253
RsaI	GTAC	3 cut(s)	1271, 1814, 1835
RsaNI	GTAC	3 cut(s)	1270, 1813, 1834
RseI	CAYNNNNRTG	5 cut(s)	72, 102, 312, 542, 1497
SacI	GAGCTC	1 cut(s)	19
SaqAI	TTAA	5 cut(s)	23, 27, 290, 554, 1854
SatI	GCNGC	7 cut(s)	374, 810, 975, 993, 1323, 1756, 1759
Sau96I	GGNCC	4 cut(s)	392, 706, 867, 962
SchI	GAGTC	2 cut(s)	147, 741
ScrFI	CCNGG	3 cut(s)	369, 1569, 1844
SduI	GDGCHC	2 cut(s)	19, 637
SfaNI	GCATC	8 cut(s)	160, 415, 747, 1205, 1376, 1527, 1644, 1698
SfcI	CTRYAG	4 cut(s)	328, 590, 972, 1952
Sfr274I	CTCGAG	1 cut(s)	12
SfuI	TTCGAA	1 cut(s)	196
SinI	GGWCC	3 cut(s)	392, 867, 962
SlaI	CTCGAG	1 cut(s)	12
SmiMI	CAYNNNNRTG	5 cut(s)	72, 102, 312, 542, 1497
SmlI	CTYRAG	2 cut(s)	12, 1043
SmoI	CTYRAG	2 cut(s)	12, 1043
SphI	GCATGC	1 cut(s)	2110
Sse9I	AATT	7 cut(s)	24, 834, 983, 1141, 1371, 1699, 1862
SsiI	CCGC	5 cut(s)	173, 795, 1079, 1755, 1758
SspMI	CTAG	7 cut(s)	38, 162, 500, 894, 1331, 1394, 2000
SstI	GAGCTC	1 cut(s)	19
StyD4I	CCNGG	3 cut(s)	367, 1567, 1842
StyI	CCWWGG	2 cut(s)	702, 1330
TaaI	ACNGT	7 cut(s)	35, 157, 559, 915, 952, 1274, 1604
TaiI	ACGT	2 cut(s)	1477, 1880
TaqI	TCGA	8 cut(s)	13, 141, 196, 228, 1279, 1535, 1594, 2020
TasI	AATT	7 cut(s)	24, 834, 983, 1141, 1371, 1699, 1862
TauI	GCSGC	2 cut(s)	1758, 1761
TfiI	GAWTC	6 cut(s)	188, 217, 602, 1564, 1899, 2122
Tru1I	TTAA	5 cut(s)	23, 27, 290, 554, 1854
Tru9I	TTAA	5 cut(s)	23, 27, 290, 554, 1854
TscAI	CASTG	4 cut(s)	319, 718, 1566, 1609
TseFI	GTSAC	2 cut(s)	523, 640
TseI	GCWGC	5 cut(s)	373, 809, 974, 992, 1322
Tsp45I	GTSAC	2 cut(s)	523, 640
TspRI	CASTG	4 cut(s)	319, 718, 1566, 1609
Van91I	CCANNNNNTGG	1 cut(s)	2144
VpaK11BI	GGWCC	3 cut(s)	392, 867, 962
XapI	RAATTY	3 cut(s)	983, 1699, 1862
XbaI	TCTAGA	1 cut(s)	37
XceI	RCATGY	2 cut(s)	999, 2110
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1794
XhoI	CTCGAG	1 cut(s)	12
XmaJI	CCTAGG	1 cut(s)	1330
XmiI	GTMKAC	1 cut(s)	573
XmnI	GAANNNNTTC	3 cut(s)	906, 1104, 1935
XspI	CTAG	7 cut(s)	38, 162, 500, 894, 1331, 1394, 2000

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.