Rorug02G0181600

ABC transporter G family member

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
16877299 .. 16885864
8566 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0181600.1

Sequence Viewer

Length: 6801 bp
ATGGAACTACCTTCATCGTCTTCTTCCCCCAACCTCCAATCAGTTCCTTCATCATCTAACTGGGAACATGATGTCTTCCTCAGCTTCAGGGGGGAGGACACCCGCAATAGTTTCACAGACCATTTATACTATGCTATGAACCAGAGAGGGATCGACGCATTTAGAGATACTGAAAAGCTTCGGAGGGGGAAATCCATTTCACCAGAACTCCAGAAAGCAATCGAAGAGTCCAAGTTTGCGGTCACTGTTCTTTCAACCAACTATGCTACTTCAACTTGGTGTCTGGATGAACTTGCACATATTCTCGATTGCAGGAAAGTGAGGGGGCTGGAAGTTCTTCCGGTTTTTTACCATGTAGAACCATCTGAGATAAGGAAGCAAACGGGAAACTACGGCAAGGCTTTTGCTGAGCATGAGACAGATTTCAAGGACGATATGAGGAAGGTGGACAAGTGGAGGAAAGCTTTAGAGGATATAGCCAGTCTCTCCGGATGGCATGTGACACAGGATAGAAGAGAATCAGAAGTTATTCAAGAAGTAGTTAATGCGATTCTAAATGCACTAAACGAAATGTTATCCGTTCCTGAAAGAGAGTTAGTTGGAATGGATGCTCGTATATTAGAAATAGAGTCTCGCCTGGATCTAGAGTCAAATGATGTTCTTACCGTAGGGATTTGGGGAATGGGCGGAATCGGTAAGACAACTCTTGCTAAGGAAGTATTCAAAAAGATCCGTAACCAATTTCATCATAGTGGCTTTGTTTCCCAAGTTAGATTGCAATCCGAAGTTGAGTTGCAGCGACGTCTCTGTGAATCCTTTTTGGGGGATGGCAATATAAACATCGGCACCAGTGAAAAAGGGATCAAGTTATTGAAGAAGGCACTGTATAAGAAAAAGGTGCTTATCGTTCTGGATGATGTTGATAATTTCAACCAAATAAAATGTCTAGCACCTGGAGGCCCGCTCGGAGAGAATATATGGGGTGGAGGGAGTCGACTGATTATAACAACTAGAGACAGGAGCCCATTGAGATACTTTAATGTACAAGAAAATAAAATATATGAGGTCGAAAAATTGAGAGATGAGGAAGCTTTTCAGCTGTTAAGTCAGAAAGCCTTCAAGAAAGACAATCCACCAGAGGAGTTTGTAGCGCTGTCCAAGAGTTTTCTGCAATATGCTAGTGGCCTTCCTTTAGCTCATGAAGTTCTGGGGTCATACTTGTCTAGGCTAAAGGTAGATGAATGGTCAGAGATATTGCATAGACTAGATGATGATCAGGATAAAGACATTTTCAGTGTGCTTCAAATAAGTTTTGATGGATTACAGGATACAGATAAGAAAATATTTTTGGACATTGCATGTTTCTTCAATGGCGAGGATCATATCCGTGTAAAGAATATATTGAAAGGTTGTGGCTTTTCTTCCAGAATAGGTATAAGTACCCTCATTGACAAATCTCTGATTAAAATCGAAAGAAATAAACTGTGGATGCATGATTTGCTACGGTGCTTGGGTTGGCATATTGTTCGTGGAGAATCTTCTTTTCCGGGTAAACGTAGCAGGTTGTGGCTTGATGACAATGCAGACAAGTACGAAGGCAGAATGTCATGGCGTTTTGAGGATGCTTGGAATGTGCTGATGGACAATATGGGAACAACTGCTGTTGAAGGCTTATTCTTAAGCTTGCCTGAAAAAGAAGAAATGCCATTGGATGATGACCCGTCCTTAACTATGCGCAACTTACGATTGCTGAAGATTTATAATGTGAACTTTCTGGATGTGCATTTCAGATATATCTCTAAAAATTTACGACTTTTAGAATGGCATGAATGCCCTCTAGAATCTTTGCCATCTGATTTTAAATCAGACAAGCTGGTTGAATTCAAGATGCCTAACAGCCGCATTAAGCAACTATGGAATGAAACGCTCTCTCTTAGATTGCTAATACTCATGGATCTTTCCAACTGCCAATATTTAGCCACCACCCCAGACTTCAGTAAGGTTCCAAATCTTGAGAGATTGATCCTTGAAGGTTGTACTGAGTTATCAGTAGTTCACCCAACAATTGGGGATCTCCAGCAACTGGTTTTTCTGAATCTTAAAGGTTGCGCAAGTCTAGAGAGCCTTCCTCAGTCCATCAGCTTGAGATCTCTTCGAATTTTTATTCTTTCGGGATGTTCAAAACTCAAACAGTTTCCAGAGATTGTGGGGAACATGGATGCTTTATCAGAACTTTATTTAGATGGCACGGCTATACGGGAGCTGCCTTTATCAATCCAGCATTTGGAAGGCCTTGTTTTGCTAAATCTTAGCGGCTGCAGGAACCTTCCGAGTCTTCCTAGTGTTCTTTGTAGTCATTTGACATCACTGAAATTTCTCTATCTGTCATTGTGCTCAAGCATGGAAAAACTGCCAGAAAACATAGGCTACTTGAAACACTTGGAGGAGCTTGATGCTTGTGATACTGCTATAAGAAAAGTTCCTGATTCCATTTCAGGTCTCAAGAATCTAAAACTATTGTGTTTCCATGGATGTTCTGGATTCACAGGTTTAGAGTTGCCAAACAAGTTCTCAGGTTTAAGATCTTTGACAACACTAAACCTAGGTGGATGTAATCTCGCAGAAGGGGCAATCCCCCATGACATTGGTGATTTATTCTCACTGCAAAGTCTGGATTTAAGTGAGAACAACATTTTCTCTGTACCTGAAAGCATCTCTCAGATTTCTGAGCTCACAGAAATTTCTCTGTATAAGTGTAGCAAACTACGGTCGTTGCCAAAAGATCTTCCATCAAGTCTAAGGAATGTAAATGTACGTGATTGTCCTATGCTGACAAACTCTTCATCTAGTTGGAGGAGATATCCGCCGCAGAAGGGTTTGAGTATCATAAACTGTCGAAAACCAGAGGAGGATGACATCTTTCCTGAACTCCATGAGTTTCGTTTGGGAACTCTGGAGGAACTTGATCTTTCCTACTGCCAACACTTGAAGAAGATCCCTGACTTGAATGGGGTTCCAAATCTGAAGAAATTGATCCTTGAAGGTTGTGAAAAATTATCAGAACTTCACCCAACAATTGGGAGTCTCCAGCATCTGATTTTTTTGAATTTGAAAGGATGTGTAGATCTAGAGAGCCTTCCCCGTTCCATCAGCTTGAAGTCTCTAAAAATATTTGTTCTTTCAGGATGTTCAAAGCTGAAAGAGTTTCCAGATATTAAGGGAGATATGGATAGTTTGTCAGAATTGCATTTAGATGGGACAGCGTTAAAGCATCTGTCAATATGCAAGACGCAATTGAAAGCCCCTATTTTGATAAATCTGTCAGGCTGCAGGAACCTTTTGACTGTTCCAGTCCTGCAAAGTCTGAAATCTCTCAATCTGTCAGGCTGCTCACGTGTATCCATATTGCCATCTAACCTGGAAAGCATGAAACATTTGGAGGAGCTTGATGCCTCTGAAACTTCTATAACAGGGGTACCCTCGTCCATTTCATATTTGGTGAAGCTTGAAGTGCTATCTTTTTTTGGATGTAGTGGTTTGCAGTTGCCTAAATGGTTCTCGGATTTACGATCTTTGAAATCATTAAATCTACGGAGGTGTGGTCTAGCAGAAGAAGTGCTTGATATCCTGTACTGCTTATCCTCTCTGAAGATTTTGGATTTGGGTGAGAACAGTTTTGTGACTATACCTAATGACATCGATCGCTTATCCTCTTTGCAGCAATTGGATTTGAGTGGAAACAATATAGTGAGCATACCGCATGAAATTGGTTGCTTATACTCGTTGCAGCTTTTAGATTTGAGTGAAAACAACTTTGTGAGTATACCTAAGAGCATCTCTAATCTTTCTGAGCTTACAATACTTCGCCTGTTTAGATGTAGTAAGCTACAGTCCTTGCCAAATAATCTTCCCTTCAATCTAAAACATGTTTATGCACAAGAATGTCCTATGTTGAAGTATAATGCAGATACTTTGACAATACGGGCATCTGGAGAAGGGGTCTTTTTCATGCATTGCGGAAAATATGAGCAGGATGATGATCAGCCAAGCCACGTCCCAGTTCCAGCTCCCAAAGACCGCATTGAACTACTGTTTCCAGTTTACATTGCGGACCGAGTGTATGGTAAAAAGCCATTTGCAATTTGTTTTCCACACAGTACAAGAATTCCCAATCTGTGGAGTCATTGGAGGAGTGGCCCTTTTGTAACAATCCCACTATCTGATGGTAACAGTGCGTGTATGGGACTTGCTCTGTTTGTTGTTTTTGAAATCCTTGAAGGCAATTTCAATAAGATATGGGAATTGGAAGAGACTATCTGTGAATTTCACACCGATGTTGGTCCTGAAAATTCCCTTGTTTTTCAGAACTTCATAGACTTCAAGGCTGGGTCATATGCACTTTGTTGCTATGAACCGCGAGGCGGGCAATTTAGTGGGATGTTTGATAAACCAAGCTCACGACTTCGGGCTTCAGTTTCAATGAAGAGACCAAATTTAAAAGTGAGAGGTTGTGGGATACATCTAATGTCAGAGGAAGACACTGCAGAGTTTGTAAAAAGTTTAGCAAATCAGACTGCCACTCAACACCTCGATTCCAATTTTGATCAACATTGCGAGTACCTATTAAATGAGGAGACAACAACTGGTAACCTGATGGAAGTGGGATCTACTTCAACTTTCAATGAAGATAGCTGCAGCAAAAGTATCTCTAAATTCAAATTGAGAGGAGAGCTGTCGATACTCTATGAGGGATGCAATGGACGTGAGAATAGTTTCCATTTTTGCTTTCCTGCTCCTGTAATTTCAGCCCCGCCCTGGTTCTTCCATCACCATGCAGGGGATGTAACTTTGTGTTACATCACTAAAAACTTACTTGATGATCAGAGATGGGTGGGATTAGAACTATATGTTCAATTTTCTCGGTGTACATCTACTTCTACATCTGGCAATAGTAGTTTTTTCTTTTATGTTGATTTGTGCTCTCATGATCATGAAAGTATAGTAATGCACGGATCCCTCAAGATAAACAGTTGTGTTGGGACCTCAGATCAACTTGTTGTATTACACGTACCACGTGTTCATTTTCAACAGCAGTTGAATCAATGTCAGGGTATTAGCGCATTGTTCAGAACCATTGATGCAGAGATGGATGTCCAAGTGTGTGGAAGCCGTTTAGCTTTCGAGCATGATTTGGAAGACTTGATCCATTCATTAACTGCAGCTGCCGGCACGTTGGGGCAACATGTCCTCACTCAACCATGCTCCCAGGCCCAACCTGTTGATCGGCGCAATGCAGAGGAAGCAGAAATGCCCATCAATTGCTGTTCCTGTTTTCAGAGATGCAGAAGTACTGCACTAGTACTACCACAAGCTCCTTCTTCTTCAATTGTGCGGCTGCGAAATTATAGATGCTATCTCCAGCAACAGCAAGGTTTTGGGGAGTCTGACGTTAACCAGTTGGTCCACTTCAGATCAGTAATGTTACTCCACTCCAGAAGCCTTTTGGAAAACAGGGACAGAAACCAAGAAAACATTGCCGAAAAAGATAAATCGTTGGTGTTGGCTCGTCATCATGTACATATAATGGCTGAGACTCAACTTCAGGGAAGCTATAGTTCACCATGGTGGAAGAGATGCCTGAAGTTGTTGCTTCGGCGGTACAAGGTGGCTACTCTCAGTCTCGGTGGACACAAAATTTCAGCTCTCAAGAATTTTGATCCTTCCTCCCCATACAATATTATTTGTTTCTCTGACAAGGAAATTCCAGTGTGGTTCAAACATGAGATGTCGTATCAGATGTCTTCTAGGTCTAGGGTGGGAATCAAACTACCTCCAAGATTGCACGAGGATGAGAATTGGAGAGGACTTGCTATATGTGTTACCTTTGAAGTTCATGACCAGCGTCCAGCTACCTCCCCGGTCAAACTTCTCTGTCACTTGAGAGCCAAGGACAACTATTGCTTGAATCCTATCCCTATGTGTTCCATCACTGAAGAGAAACTCAAGTCGTTGCATCTTGGTCGATTCATTTGGGTAACCTACATCCCCAGTATTTTGCTAACGGAGTTCTGTGTGATTAGTGATGTAGAGGCCAGAATTTATGTTAGTTACAGAGGCTTGACAGTGGAGAAGTGTGGTATACGTCTCTTGTACCGGCAAGAAGAGGGGGAGTTTGAGAACACAATAACCGAATGTTGGACCTCTTTCTTCGATAATCTGTCTTTCATGCGTCAACTTGTAGAAGCAGATGATCAACCGCATGAACTTCCAATGCTTGAAGGGCATAACAAGGTATTTGATCCGGATTTAATATACAATGCAATCTGCCCTTCTAATGAAATTCTGGAGTGGTTCGGGCATCGCATTGAGGATTCCTCGGATGACACCTGGGGCTGTGAATTCCAGTTACCACCATCTTTGAGCGACACAAATTGGATAGGATTGTCCATCTGTGTATCATATCGTATTAGAAGAGTGGATTGGTACGAACCTAATTCCCACCCCTTTAATTTAACATTGAAAACCAGAAACAATGCTTTGTCGTCTCTCCATCGGTATCAAAGTAGCAATGAAGAATATCAGTTCGTAAACAGTTGTCGTATTATGAATCGTAGATTCATTTGGCTCTCCTACATACCACGACGCTGGTTTCTACATCAGCTAAATGATGAGTCTGTCCTCTTTGCTTCACTCCGGGACACCTGGTGGAGCCCGGCCAAGATCTATCACCGATTTGTATATGCGCAGGAAGAGTTCAAGCAGCTCTGTTTCAATCTCGATCGACCGGGTGCCCCACAGTAA

Protein Analysis

2266

Amino Acids

257.8

Weight (kDa)

6.01

Isoelectric Point (pI)

46.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 23 - 194 9.2e-55 TIR domain
TIR_2 PF13676 25 - 121 3.1e-15 TIR domain
NB-ARC PF00931 209 - 376 3e-22 NB-ARC domain
WHD_ROQ1 PF23282 444 - 513 2.6e-18 Disease resistance protein Roq1-like, winged-helix domain
LRR_14 PF23598 687 - 793 3.8e-07 Leucine-rich repeat region
LRR_13 PF23286 715 - 783 2.6e-08 Disease resistance protein RPS4B-like, leucine-rich repeats
LRR_14 PF23598 787 - 868 3.8e-11 Leucine-rich repeat region
LRR_14 PF23598 971 - 1087 2e-06 Leucine-rich repeat region
LRR_14 PF23598 1111 - 1221 1.1e-09 Leucine-rich repeat region
LRR_14 PF23598 1213 - 1298 3.7e-10 Leucine-rich repeat region
LRR_8 PF13855 1213 - 1249 3.7e-07 Leucine rich repeat
C-JID PF20160 1917 - 2054 4.6e-08 C-JID domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000287)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20410 FvH4_1g20410 FvH4_6g39250 FvH4_6g39250
malus_domestica MD00G1036800.v1.1 MD05G1042600.v1.1 MD10G1049900.v1.1
prunus_persica Prupe.6G191500_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064400_v2.0.a1
pyrus_communis pycom05g03520 pycom10g03500 pycom10g03510 pycom15g28250
rosa_chinensis RchiOBHm_Chr1g0336561 RchiOBHm_Chr2g0112551 RchiOBHm_Chr2g0112561 RchiOBHm_Chr2g0112631 RchiOBHm_Chr2g0112641 RchiOBHm_Chr2g0153091 RchiOBHm_Chr2g0153111 RchiOBHm_Chr2g0153141 RchiOBHm_Chr2g0153161 RchiOBHm_Chr2g0153171
rosa_laevigata RLG00000017991 RLG00000017992 RLG00000017995 RLG00000017997 RLG00000020676 RLG00000020677 RLG00000020678 RLG00000020682
rosa_multiflora Rmu_co8208234.1_g000001 Rmu_co8218328.1_g000001 Rmu_co8425243.1_g000001 Rmu_sc0000218.1_g000037 Rmu_sc0000218.1_g000044 Rmu_sc0000218.1_g000047 Rmu_sc0000218.1_g000052 Rmu_sc0001155.1_g000011 Rmu_sc0001155.1_g000026 Rmu_sc0001155.1_g000029 Rmu_sc0001499.1_g000001 Rmu_sc0001499.1_g000040 Rmu_sc0002401.1_g000032 Rmu_sc0002401.1_g000033 Rmu_sc0004070.1_g000003 Rmu_sc0004070.1_g000004 Rmu_sc0005547.1_g000001 Rmu_sc0006062.1_g000002 Rmu_sc0009780.1_g000005 Rmu_sc0013071.1_g000001 Rmu_sc0013071.1_g000012
rosa_roxburghii Rroxscaffold_2G00095130 Rroxscaffold_2G00095140 Rroxscaffold_2G00095160 Rroxscaffold_2G00095180 Rroxscaffold_2G00095190 Rroxscaffold_2G00095200 Rroxscaffold_2G00131290 Rroxscaffold_2G00131320 Rroxscaffold_2G00131350
rosa_rugosa Rorug02G0181500 Rorug02G0181500 Rorug02G0181600 Rorug02G0181700 Rorug02G0437300 Rorug02G0437400
rosa_samantha Rh1DG154100 Rh2AG235200 Rh2AG235300 Rh2AG235400 Rh2AG235600 Rh2AG235800 Rh2AG499700 Rh2AG499800 Rh2AG500000 Rh2AG500100 Rh2AG500200 Rh2BG248500 Rh2BG248700 Rh2BG248800 Rh2BG511000 Rh2BG511200 Rh2BG511300 Rh2BG511600 Rh2CG239600 Rh2CG239700 Rh2CG239900 Rh2CG240000 Rh2CG485900 Rh2CG486000 Rh2CG486200 Rh2CG486300 Rh2CG486400 Rh2DG242500 Rh2DG242600 Rh2DG242700 Rh2DG242900 Rh2DG243100 Rh2DG522800 Rh2DG523100 Rh2DG523200 Rh2DG523500 Rh2DG523600 Rh5DG200200
rosa_wichuraiana Rw2G018200 Rw2G018210 Rw2G018230 Rw2G018240 Rw2G041010 Rw2G041020 Rw2G041030 Rw2G041050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1004, 1761
AatII GACGTC 1 cut(s) 805
Acc16I TGCGCA 3 cut(s) 1736, 2110, 6744
Acc36I ACCTGC 1 cut(s) 1551
Acc65I GGTACC 1 cut(s) 3475
AccB1I GGYRCC 3 cut(s) 845, 3475, 6788
AccB7I CCANNNNNTGG 5 cut(s) 2066, 2083, 2284, 3077, 4176
AccBSI CCGCTC 1 cut(s) 964
AccI GTMKAC 3 cut(s) 994, 3823, 6139
AccII CGCG 1 cut(s) 4417
AccIII TCCGGA 2 cut(s) 488, 6301
AcoI YGGCCR 1 cut(s) 6714
AcvI CACGTG 2 cut(s) 3395, 5075
AcyI GRCGYC 1 cut(s) 802
AdeI CACNNNGTG 1 cut(s) 6705
AfeI AGCGCT 1 cut(s) 1152
AflII CTTAAG 1 cut(s) 1678
AflIII ACRYGT 5 cut(s) 3394, 3925, 5065, 5074, 5242
AhlI ACTAGT 1 cut(s) 5356
AjiI CACGTC 2 cut(s) 4054, 4763
AjnI CCWGG 7 cut(s) 636, 952, 3417, 4814, 5265, 6386, 6701
AjuI GAANNNNNNNTTGG 4 cut(s) 1331, 1363, 6463, 6495
AleI CACNNNNGTG 1 cut(s) 5623
Alw21I GWGCWC 3 cut(s) 2396, 2733, 4982
AlwNI CAGNNNCTG 2 cut(s) 2083, 3094
Aor13HI TCCGGA 2 cut(s) 488, 6301
Aor51HI AGCGCT 1 cut(s) 1152
AoxI GGCC 7 cut(s) 958, 1183, 2290, 4195, 5268, 6090, 6714
ArsI GACNNNNNNTTYG 2 cut(s) 928, 960
Asp700I GAANNNNTTC 6 cut(s) 177, 336, 528, 1092, 1115, 4772
Asp718I GGTACC 1 cut(s) 3475
AspA2I CCTAGG 1 cut(s) 2602
AspLEI GCGC 6 cut(s) 1153, 1737, 2111, 5120, 5289, 6745
AspS9I GGNCC 8 cut(s) 959, 4111, 4196, 4340, 5040, 5269, 5461, 6198
AsuC2I CCSGG 5 cut(s) 1548, 5918, 6695, 6713, 6786
AsuHPI GGTGA 9 cut(s) 192, 2048, 2660, 3059, 3511, 3677, 4820, 5610, 6719
AsuII TTCGAA 1 cut(s) 2155
AvaII GGWCC 5 cut(s) 4111, 4340, 5040, 5461, 6198
AvrII CCTAGG 1 cut(s) 2602
BaeGI GKGCMC 1 cut(s) 6793
BaeI ACNNNNGTAYC 4 cut(s) 3459, 3467, 3492, 3500
BamHI GGATCC 1 cut(s) 5012
BanI GGYRCC 3 cut(s) 845, 3475, 6788
BanII GRGCYC 3 cut(s) 1025, 2733, 6713
BarI GAAGNNNNNNTAC 2 cut(s) 4918, 4950
BauI CACGAG 1 cut(s) 5843
BbrPI CACGTG 2 cut(s) 3395, 5075
BbsI GAAGAC 6 cut(s) 12, 67, 2327, 4542, 5202, 5793
Bbv12I GWGCWC 3 cut(s) 2396, 2733, 4982
BbvCI CCTCAGC 1 cut(s) 80
BceAI ACGGC 3 cut(s) 409, 2265, 5154
BcgI CGANNNNNNTGC 4 cut(s) 1508, 1542, 6002, 6036
BciT130I CCWGG 7 cut(s) 638, 954, 3419, 4816, 5267, 6388, 6703
BciVI GTATCC 3 cut(s) 1321, 3409, 4509
BclI TGATCA 6 cut(s) 1273, 4039, 4603, 4879, 4987, 6250
BcnI CCSGG 5 cut(s) 1548, 5918, 6695, 6713, 6786
BcuI ACTAGT 1 cut(s) 5356
BfmI CTRYAG 7 cut(s) 2317, 3328, 3887, 4542, 4693, 5217, 5611
BfoI RGCGCY 1 cut(s) 1154
BfrI CTTAAG 1 cut(s) 1678
BfuAI ACCTGC 1 cut(s) 1551
BfuI GTATCC 3 cut(s) 1321, 3409, 4509
BglII AGATCT 5 cut(s) 2147, 2582, 2782, 3124, 6720
BlnI CCTAGG 1 cut(s) 2602
BlpI GCTNAGC 1 cut(s) 408
BmcAI AGTACT 2 cut(s) 5350, 5361
Bme18I GGWCC 5 cut(s) 4111, 4340, 5040, 5461, 6198
BmgBI CACGTC 2 cut(s) 4054, 4763
BmgT120I GGNCC 8 cut(s) 959, 4111, 4196, 4340, 5040, 5269, 5461, 6198
BmrI ACTGGG 3 cut(s) 70, 4052, 6042
BmuI ACTGGG 3 cut(s) 70, 4052, 6042
BoxI GACNNNNGTC 1 cut(s) 5901
BpiI GAAGAC 6 cut(s) 12, 67, 2327, 4542, 5202, 5793
BplI GAGNNNNNCTC 6 cut(s) 948, 980, 2113, 2145, 6359, 6391
BpmI CTGGAG 9 cut(s) 194, 975, 2060, 2975, 3071, 4011, 5402, 5476, 6365
Bpu10I CCTNAGC 2 cut(s) 80, 711
Bpu1102I GCTNAGC 1 cut(s) 408
Bpu14I TTCGAA 1 cut(s) 2155
BpuEI CTTGAG 8 cut(s) 2033, 2164, 2380, 2486, 5003, 5690, 5959, 5987
BpuMI CCSGG 5 cut(s) 1548, 5918, 6695, 6713, 6786
Bsa29I ATCGAT 1 cut(s) 3699
BsaAI YACGTR 4 cut(s) 2816, 3395, 5068, 5075
BsaBI GATNNNNATC 4 cut(s) 778, 1272, 1466, 4038
BsaHI GRCGYC 1 cut(s) 802
BsaI GGTCTC 2 cut(s) 2504, 4480
BsaJI CCNNGG 9 cut(s) 2527, 2602, 4814, 5265, 5621, 5916, 5946, 6375, 6387
BsaWI WCCGGW 3 cut(s) 340, 488, 6301
BsaXI ACNNNNNCTCC 6 cut(s) 192, 222, 3586, 3616, 3984, 4014
Bse118I RCCGGY 2 cut(s) 5225, 6153
Bse3DI GCAATG 8 cut(s) 1353, 4012, 4104, 4609, 4762, 5296, 5532, 6574
Bse8I GATNNNNATC 4 cut(s) 778, 1272, 1466, 4038
BseAI TCCGGA 2 cut(s) 488, 6301
BseBI CCWGG 7 cut(s) 638, 954, 3419, 4816, 5267, 6388, 6703
BseCI ATCGAT 1 cut(s) 3699
BseDI CCNNGG 9 cut(s) 2527, 2602, 4814, 5265, 5621, 5916, 5946, 6375, 6387
BseJI GATNNNNATC 4 cut(s) 778, 1272, 1466, 4038
BseMI GCAATG 8 cut(s) 1353, 4012, 4104, 4609, 4762, 5296, 5532, 6574
BseRI GAGGAG 8 cut(s) 1154, 2459, 2869, 2921, 3455, 4204, 4646, 4740
BseSI GKGCMC 1 cut(s) 6793
BseYI CCCAGC 1 cut(s) 4385
BsgI GTGCAG 1 cut(s) 5337
Bsh1236I CGCG 1 cut(s) 4417
Bsh1285I CGRYCG 4 cut(s) 2771, 3703, 6781, 6785
BshFI GGCC 7 cut(s) 960, 1185, 2292, 4197, 5270, 6092, 6716
BshNI GGYRCC 3 cut(s) 845, 3475, 6788
BshVI ATCGAT 1 cut(s) 3699
BsiEI CGRYCG 4 cut(s) 2771, 3703, 6781, 6785
BsiHKAI GWGCWC 3 cut(s) 2396, 2733, 4982
BslFI GGGAC 6 cut(s) 3271, 4040, 4257, 5053, 5528, 6710
BsmBI CGTCTC 3 cut(s) 809, 6149, 6549
BsmFI GGGAC 6 cut(s) 3271, 4040, 4257, 5053, 5528, 6710
BsmI GAATGC 1 cut(s) 1835
BsnI GGCC 7 cut(s) 960, 1185, 2292, 4197, 5270, 6092, 6716
Bso31I GGTCTC 2 cut(s) 2504, 4480
Bsp119I TTCGAA 1 cut(s) 2155
Bsp1286I GDGCHC 6 cut(s) 1025, 2396, 2733, 4982, 6713, 6793
Bsp13I TCCGGA 2 cut(s) 488, 6301
Bsp1407I TGTACA 3 cut(s) 1042, 4925, 5575
Bsp1720I GCTNAGC 1 cut(s) 408
Bsp19I CCATGG 2 cut(s) 2527, 5621
BspANI GGCC 7 cut(s) 960, 1185, 2292, 4197, 5270, 6092, 6716
BspDI ATCGAT 1 cut(s) 3699
BspEI TCCGGA 2 cut(s) 488, 6301
BspFNI CGCG 1 cut(s) 4417
BspHI TCATGA 4 cut(s) 1198, 4984, 4990, 5893
BspMAI CTGCAG 5 cut(s) 2321, 3332, 4546, 4697, 5221
BspMI ACCTGC 1 cut(s) 1551
BspT104I TTCGAA 1 cut(s) 2155
BspT107I GGYRCC 3 cut(s) 845, 3475, 6788
BspTI CTTAAG 1 cut(s) 1678
BspTNI GGTCTC 2 cut(s) 2504, 4480
BsrBI CCGCTC 1 cut(s) 964
BsrDI GCAATG 8 cut(s) 1353, 4012, 4104, 4609, 4762, 5296, 5532, 6574
BsrFI RCCGGY 2 cut(s) 5225, 6153
BsrGI TGTACA 3 cut(s) 1042, 4925, 5575
BssAI RCCGGY 2 cut(s) 5225, 6153
BssECI CCNNGG 9 cut(s) 2527, 2602, 4814, 5265, 5621, 5916, 5946, 6375, 6387
BssNAI GTATAC 2 cut(s) 3824, 6140
BssNI GRCGYC 1 cut(s) 802
BssSI CACGAG 1 cut(s) 5843
BssT1I CCWWGG 4 cut(s) 2527, 2602, 5621, 5946
Bst1107I GTATAC 2 cut(s) 3824, 6140
Bst2BI CACGAG 1 cut(s) 5843
Bst2UI CCWGG 7 cut(s) 638, 954, 3419, 4816, 5267, 6388, 6703
BstACI GRCGYC 1 cut(s) 802
BstAFI CTTAAG 1 cut(s) 1678
BstAPI GCANNNNNTGC 1 cut(s) 1498
BstAUI TGTACA 3 cut(s) 1042, 4925, 5575
BstBAI YACGTR 4 cut(s) 2816, 3395, 5068, 5075
BstBI TTCGAA 1 cut(s) 2155
BstC8I GCNNGC 4 cut(s) 962, 1685, 4424, 5227
BstDSI CCRYGG 2 cut(s) 2527, 5621
BstEII GGTNACC 2 cut(s) 4646, 6034
BstFNI CGCG 1 cut(s) 4417
BstH2I RGCGCY 1 cut(s) 1154
BstHHI GCGC 6 cut(s) 1153, 1737, 2111, 5120, 5289, 6745
BstMCI CGRYCG 4 cut(s) 2771, 3703, 6781, 6785
BstMWI GCNNNNNNNGC 6 cut(s) 1498, 2627, 3511, 4423, 5300, 6280
BstNI CCWGG 7 cut(s) 638, 954, 3419, 4816, 5267, 6388, 6703
BstNSI RCATGY 4 cut(s) 500, 1362, 3929, 5246
BstPAI GACNNNNGTC 1 cut(s) 5901
BstPI GGTNACC 2 cut(s) 4646, 6034
BstSFI CTRYAG 7 cut(s) 2317, 3328, 3887, 4542, 4693, 5217, 5611
BstSLI GKGCMC 1 cut(s) 6793
BstUI CGCG 1 cut(s) 4417
BstV2I GAAGAC 6 cut(s) 12, 67, 2327, 4542, 5202, 5793
BstXI CCANNNNNNTGG 3 cut(s) 2645, 5162, 6645
BstZ17I GTATAC 2 cut(s) 3824, 6140
Bsu15I ATCGAT 1 cut(s) 3699
BsuI GTATCC 3 cut(s) 1321, 3409, 4509
BsuRI GGCC 7 cut(s) 960, 1185, 2292, 4197, 5270, 6092, 6716
BsuTUI ATCGAT 1 cut(s) 3699
BtgI CCRYGG 2 cut(s) 2527, 5621
BtgZI GCGATG 1 cut(s) 6344
BtrI CACGTC 2 cut(s) 4054, 4763
BtsI GCAGTG 2 cut(s) 2660, 4539
BveI ACCTGC 1 cut(s) 1551
Cac8I GCNNGC 4 cut(s) 962, 1685, 4424, 5227
CaiI CAGNNNCTG 2 cut(s) 2083, 3094
CciI TCATGA 4 cut(s) 1198, 4984, 4990, 5893
CfoI GCGC 6 cut(s) 1153, 1737, 2111, 5120, 5289, 6745
Cfr10I RCCGGY 2 cut(s) 5225, 6153
Cfr13I GGNCC 8 cut(s) 959, 4111, 4196, 4340, 5040, 5269, 5461, 6198
ClaI ATCGAT 1 cut(s) 3699
CpoI CGGWCCG 1 cut(s) 4111
CseI GACGC 5 cut(s) 164, 3298, 5891, 6218, 6651
CsiI ACCWGGT 1 cut(s) 6701
CspCI CAANNNNNGTGG 2 cut(s) 6399, 6434
CspI CGGWCCG 1 cut(s) 4111
DraI TTTAAA 2 cut(s) 1861, 4497
DraIII CACNNNGTG 1 cut(s) 6705
EaeI YGGCCR 1 cut(s) 6714
EciI GGCGGA 2 cut(s) 702, 2853
Ecl136II GAGCTC 1 cut(s) 2731
Eco130I CCWWGG 4 cut(s) 2527, 2602, 5621, 5946
Eco147I AGGCCT 1 cut(s) 2292
Eco24I GRGCYC 3 cut(s) 1025, 2733, 6713
Eco31I GGTCTC 2 cut(s) 2504, 4480
Eco32I GATATC 2 cut(s) 2861, 3625
Eco47I GGWCC 5 cut(s) 4111, 4340, 5040, 5461, 6198
Eco47III AGCGCT 1 cut(s) 1152
Eco53kI GAGCTC 1 cut(s) 2731
Eco72I CACGTG 2 cut(s) 3395, 5075
Eco91I GGTNACC 2 cut(s) 4646, 6034
EcoICRI GAGCTC 1 cut(s) 2731
EcoO109I RGGNCCY 1 cut(s) 5040
EcoO65I GGTNACC 2 cut(s) 4646, 6034
EcoRI GAATTC 3 cut(s) 1880, 4164, 6398
EcoRII CCWGG 7 cut(s) 636, 952, 3417, 4814, 5265, 6386, 6701
EcoRV GATATC 2 cut(s) 2861, 3625
EcoT14I CCWWGG 4 cut(s) 2527, 2602, 5621, 5946
EcoT22I ATGCAT 2 cut(s) 1494, 4014
EcoT38I GRGCYC 3 cut(s) 1025, 2733, 6713
ErhI CCWWGG 4 cut(s) 2527, 2602, 5621, 5946
Esp3I CGTCTC 3 cut(s) 809, 6149, 6549
FalI AAGNNNNNCTT 2 cut(s) 3603, 3635
FaqI GGGAC 6 cut(s) 3271, 4040, 4257, 5053, 5528, 6710
FauI CCCGC 4 cut(s) 110, 969, 4415, 4818
FauNDI CATATG 1 cut(s) 4393
FbaI TGATCA 6 cut(s) 1273, 4039, 4603, 4879, 4987, 6250
FblI GTMKAC 3 cut(s) 994, 3823, 6139
FriOI GRGCYC 3 cut(s) 1025, 2733, 6713
FspI TGCGCA 3 cut(s) 1736, 2110, 6744
GlaI GCGC 6 cut(s) 1152, 1736, 2110, 5119, 5288, 6744
GsaI CCCAGC 1 cut(s) 4389
GsuI CTGGAG 9 cut(s) 194, 975, 2060, 2975, 3071, 4011, 5402, 5476, 6365
HaeII RGCGCY 1 cut(s) 1154
HaeIII GGCC 7 cut(s) 960, 1185, 2292, 4197, 5270, 6092, 6716
HgaI GACGC 5 cut(s) 164, 3298, 5891, 6218, 6651
HhaI GCGC 6 cut(s) 1153, 1737, 2111, 5120, 5289, 6745
Hin1I GRCGYC 1 cut(s) 802
Hin6I GCGC 6 cut(s) 1151, 1735, 2109, 5118, 5287, 6743
HinP1I GCGC 6 cut(s) 1151, 1735, 2109, 5118, 5287, 6743
HincII GTYRAC 3 cut(s) 995, 5452, 6233
HindII GTYRAC 3 cut(s) 995, 5452, 6233
HindIII AAGCTT 5 cut(s) 176, 462, 1089, 1681, 3503
HpaI GTTAAC 1 cut(s) 5452
HphI GGTGA 9 cut(s) 192, 2048, 2660, 3059, 3511, 3677, 4820, 5610, 6719
Hpy99I CGWCG 3 cut(s) 158, 804, 6645
HpyF10VI GCNNNNNNNGC 6 cut(s) 1498, 2627, 3511, 4423, 5300, 6280
Hsp92I GRCGYC 1 cut(s) 802
HspAI GCGC 6 cut(s) 1151, 1735, 2109, 5118, 5287, 6743
Kpn2I TCCGGA 2 cut(s) 488, 6301
KpnI GGTACC 1 cut(s) 3479
KroI GCCGGC 1 cut(s) 5225
KroNI GCCGGC 1 cut(s) 5227
Ksp22I TGATCA 6 cut(s) 1273, 4039, 4603, 4879, 4987, 6250
KspAI GTTAAC 1 cut(s) 5452
LmnI GCTCC 9 cut(s) 1020, 2260, 2446, 3442, 4072, 4798, 5267, 5377, 6708
MabI ACCWGGT 1 cut(s) 6701
MbiI CCGCTC 1 cut(s) 964
MfeI CAATTG 6 cut(s) 2064, 3075, 3293, 3722, 5317, 5385
MhlI GDGCHC 6 cut(s) 1025, 2396, 2733, 4982, 6713, 6793
MmeI TCCRAC 4 cut(s) 580, 1986, 2831, 6176
Mph1103I ATGCAT 2 cut(s) 1494, 4014
MroI TCCGGA 2 cut(s) 488, 6301
MroNI GCCGGC 1 cut(s) 5225
MroXI GAANNNNTTC 6 cut(s) 177, 336, 528, 1092, 1115, 4772
MspA1I CMGCKG 2 cut(s) 1099, 5222
MspCI CTTAAG 1 cut(s) 1678
MunI CAATTG 6 cut(s) 2064, 3075, 3293, 3722, 5317, 5385
Mva1269I GAATGC 1 cut(s) 1835
MvaI CCWGG 7 cut(s) 638, 954, 3419, 4816, 5267, 6388, 6703
MvnI CGCG 1 cut(s) 4417
MwoI GCNNNNNNNGC 6 cut(s) 1498, 2627, 3511, 4423, 5300, 6280
NaeI GCCGGC 1 cut(s) 5227
NciI CCSGG 5 cut(s) 1548, 5918, 6695, 6713, 6786
NcoI CCATGG 2 cut(s) 2527, 5621
NdeI CATATG 1 cut(s) 4393
NgoMIV GCCGGC 1 cut(s) 5225
NmuCI GTSAC 4 cut(s) 241, 499, 3679, 5933
NsbI TGCGCA 3 cut(s) 1736, 2110, 6744
NsiI ATGCAT 2 cut(s) 1494, 4014
NspI RCATGY 4 cut(s) 500, 1362, 3929, 5246
NspV TTCGAA 1 cut(s) 2155
OliI CACNNNNGTG 1 cut(s) 5623
PagI TCATGA 4 cut(s) 1198, 4984, 4990, 5893
PceI AGGCCT 1 cut(s) 2292
PciI ACATGT 2 cut(s) 3925, 5242
PctI GAATGC 1 cut(s) 1835
PdiI GCCGGC 1 cut(s) 5227
PdmI GAANNNNTTC 6 cut(s) 177, 336, 528, 1092, 1115, 4772
PflMI CCANNNNNTGG 5 cut(s) 2066, 2083, 2284, 3077, 4176
PfoI TCCNGGA 1 cut(s) 6693
Ple19I CGATCG 2 cut(s) 3703, 6781
PmaCI CACGTG 2 cut(s) 3395, 5075
PmlI CACGTG 2 cut(s) 3395, 5075
Ppu21I YACGTR 4 cut(s) 2816, 3395, 5068, 5075
PpuMI RGGWCCY 1 cut(s) 5040
PscI ACATGT 2 cut(s) 3925, 5242
PshAI GACNNNNGTC 1 cut(s) 5901
PsiI TTATAA 2 cut(s) 1004, 1761
Psp124BI GAGCTC 1 cut(s) 2733
Psp5II RGGWCCY 1 cut(s) 5040
Psp6I CCWGG 7 cut(s) 636, 952, 3417, 4814, 5265, 6386, 6701
PspCI CACGTG 2 cut(s) 3395, 5075
PspEI GGTNACC 2 cut(s) 4646, 6034
PspFI CCCAGC 1 cut(s) 4385
PspGI CCWGG 7 cut(s) 636, 952, 3417, 4814, 5265, 6386, 6701
PspPI GGNCC 8 cut(s) 959, 4111, 4196, 4340, 5040, 5269, 5461, 6198
PspPPI RGGWCCY 1 cut(s) 5040
PsrI GAACNNNNNNTAC 2 cut(s) 5061, 5093
PstI CTGCAG 5 cut(s) 2321, 3332, 4546, 4697, 5221
PstNI CAGNNNCTG 2 cut(s) 2083, 3094
PvuI CGATCG 2 cut(s) 3703, 6781
PvuII CAGCTG 2 cut(s) 1099, 5222
Rsr2I CGGWCCG 1 cut(s) 4111
RsrII CGGWCCG 1 cut(s) 4111
SacI GAGCTC 1 cut(s) 2733
SalI GTCGAC 1 cut(s) 993
Sau96I GGNCC 8 cut(s) 959, 4111, 4196, 4340, 5040, 5269, 5461, 6198
ScaI AGTACT 2 cut(s) 5350, 5361
SduI GDGCHC 6 cut(s) 1025, 2396, 2733, 4982, 6713, 6793
SexAI ACCWGGT 1 cut(s) 6701
SfcI CTRYAG 7 cut(s) 2317, 3328, 3887, 4542, 4693, 5217, 5611
SfuI TTCGAA 1 cut(s) 2155
SinI GGWCC 5 cut(s) 4111, 4340, 5040, 5461, 6198
SmlI CTYRAG 9 cut(s) 1678, 2012, 2143, 2395, 2501, 5018, 5705, 5938, 6002
SmoI CTYRAG 9 cut(s) 1678, 2012, 2143, 2395, 2501, 5018, 5705, 5938, 6002
SpeI ACTAGT 1 cut(s) 5356
SseBI AGGCCT 1 cut(s) 2292
SspI AATATT 4 cut(s) 1344, 1973, 3171, 5737
SstI GAGCTC 1 cut(s) 2733
StuI AGGCCT 1 cut(s) 2292
StyI CCWWGG 4 cut(s) 2527, 2602, 5621, 5946
TaqII GACCGA 1 cut(s) 4128
TatI WGTACW 8 cut(s) 1042, 2036, 3630, 4157, 4925, 5348, 5359, 5575
TauI GCSGC 4 cut(s) 1902, 2316, 2869, 5395
TseFI GTSAC 4 cut(s) 241, 499, 3679, 5933
Tsp45I GTSAC 4 cut(s) 241, 499, 3679, 5933
TspGWI ACGGA 6 cut(s) 568, 722, 1376, 3607, 5025, 6077
Van91I CCANNNNNTGG 5 cut(s) 2066, 2083, 2284, 3077, 4176
Vha464I CTTAAG 1 cut(s) 1678
VpaK11BI GGWCC 5 cut(s) 4111, 4340, 5040, 5461, 6198
XbaI TCTAGA 4 cut(s) 643, 1837, 2116, 3127
XceI RCATGY 4 cut(s) 500, 1362, 3929, 5246
XcmI CCANNNNNNNNNTGG 3 cut(s) 2534, 3493, 5500
XmaJI CCTAGG 1 cut(s) 2602
XmiI GTMKAC 3 cut(s) 994, 3823, 6139
XmnI GAANNNNTTC 6 cut(s) 177, 336, 528, 1092, 1115, 4772
ZraI GACGTC 1 cut(s) 803
ZrmI AGTACT 2 cut(s) 5350, 5361
Zsp2I ATGCAT 2 cut(s) 1494, 4014
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.