Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0000287

Physical Location & Seq

Genomic Coordinates Forward (+)

6511425 .. 6516185

Gene Structure 4761 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1036800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2223 bp

ATGGAGTTGAATTCTTCGGCTAAAAGTAGTGTTCCAAGATGGACACCAAGTCCAAGCCCAACAAGAACATTATTGTCATCAGATGATGATCATATGCAAAGGCAACAAACCAGAGATTCTGCAGAAGAAGATGATGATGGTGGGAACATATCATTGTCCTGCTCCAGCATGGACAGAATTTTCCCGTTCCGCATTGAGTTTAAAGGCGGTTTGGCTTCGAACTCCGGCAAGGACGTTCGTGAAGCTCCGCCTCTGAGACTGGAATCCGTTGCAAAGCTGAGTTGCGGAAATGATCATCAAAGTAGTGGTGATGGTGTTGATGTCGAAATCAGGTCGAAAAGGAAGGGAGTTTCTTTGACATGGAAGGACCTGTGGGTTGGTGTAGCTGATGGGAAAAATGGGCAAAGAATGATCTTGCAGGAGGTTACAGGGTATGCTCAACCTGGTGAGATGTTGGCTATCATGGGTCCTTCTGGCTCTGGCAAATCTACCCTTTTGGATGCTTTGGCAGGAAGGCTAAGTTCAAACACACAGCAGACCGGGGAGATCTTAATCAATGGCCGTAAAGAAACACTTGCTTTCGGAACATCGGCGTACGTGACTCAAGACGACACTCTAATGACAACATTAACAGTAAGGGAAGCTGTATATTACTCAGCGCAGCTGCAACTGCCCGACTCCATGTCCCAAGCAGAAAAGAAGGAAAGAGCGGAGATGACGATAAGGGAGATGGGGTTGCAAGACTCCATGGACACAAGAATTGGAGGTTGGAGCATAAAAGGACTTAGCGGTGGCCAGAAAAGAAGAGTTAGCATTTGCATTGAAATCTTGACTCGCCCGAAGCTTCTCTTCCTTGATGAGCCTACTAGTGGCCTAGACAGTGCAGCGTCTTACCACGTCATGAACCGCATTGTTAAGCTAGCTCACCGTGATGGAAGGACAGTTATTGCATCGATTCATCAACCTAGCAGTGAGGTTTTCGATCTTTTCCAAAATCTTTGCCTACTCTCCTCTAGTAGGACAGTCTACTTTGGCCTTGCTTCAATGGCAGAACAATTTTTTGCTTCAAATGGATTCCCATGCCCGACTCTGAGAAACCCATCAGATCACTACCTTAGAACTATCAACAAGGATTTTGATGTTGATATCGAACAAGGGCTTGGGGGCAAAACAAGCACAGAAGAAGCGATTAATATTCTCATACAATCATACAAGTATTCAAATATTAACAAGCAAGTTCAGCTGCAGGTAGCTAGTATTTCCCAACAGAAAGGTGGAACTCTAGAGAAGGGAAGTCAAGCCAGCTTCGTAAACCAATGCCTTGTTCTCACAAGGAGATCGTTTGTGAACATGTATCGCGATCTTGGCTACTACTGGCTTCGCCTTGCAATTTACATTGCCTTGTGTTTATGCGTAGGCACTATCTTTTACGACATTGGCTCCACTTTTGGGTCCATACAGGCGAGAGGTTCGATGCTTATGTTTGTTGGAGCATTCTTGACTTTCATGGCAATAGGTGGATTCCCTTCTTTTGTAGAAGACATGAAGATCTTCGGGCGAGAGAGATTGAACGGGCACTATGGTGTTTCGGCATTTGTTGTTGGAAACACGTTTTCCTCCATTCCATACTTGCTCATCATCTCTTTAATTCCCGGAGCTATAGCCTACTACCTTGTCGGTCTTCAAAAGAGCTTTGATCACTTTGCCTATTTTGCATTGCTACTCTTTGTGACCATGATGTTGGTCGAGAGCCTAATGATGATTGTCGCAAGCGTTGTGCCAGATTTCCTCATGGGAATTATTACCGGTGCTGGAATTCAAGGAGTAATGATGCTGAACGGAGGTTTCTTCCGACTACCCAATGACCTCCCTAAGCCCTTCTGGAGATATCCAATGTACTACATTGCATTCCACAAGTACGCAAATGAAGGATTCTACAAAAATGAGTTTGAAGGACTGACATTCCCAAACAATCAAGCAGAAGGATATTCAACAATTAACGGTGAAGAAATTTTACGAAGCGTTTGGCAAGTGCAGATGGGATACTCCAAGTGGGTCGATCTTGCCATTTTGTTTGGAATGGTAATAGTTTACAGGCTCATGTTTCTGGGAATCATAAAGTTCACAGAAAAGGTTGTACCAATCATCAAAGCTCTCATAGTTGCTACTCCGAAGCACTCGAAACAGATCACAGAAAATCCACCCCCCATACCCTCAGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005319 GO:0005342 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006950 GO:0006970 GO:0007275 GO:0007389 GO:0008028 GO:0008150 GO:0008509 GO:0008514 GO:0009611 GO:0009628 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0009897 GO:0009965 GO:0009986 GO:0010016 GO:0010033 GO:0010051 GO:0010154 GO:0010222 GO:0010588 GO:0010876 GO:0015075 GO:0015245 GO:0015318 GO:0015399 GO:0015405 GO:0015711 GO:0015718 GO:0015849 GO:0015908 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0022804 GO:0022857 GO:0031224 GO:0032501 GO:0032502 GO:0033036 GO:0033993 GO:0034220 GO:0042221 GO:0042623 GO:0042626 GO:0042802 GO:0042803 GO:0043492 GO:0044425 GO:0044459 GO:0044464 GO:0046942 GO:0046943 GO:0046983 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071702 GO:0071944 GO:0080051 GO:0090698 GO:0097305 GO:0098552 GO:0098656 GO:0099402 GO:1901700 GO:1903825 GO:1905039 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

741

Amino Acids

82.08

Weight (kDa)

6.82

Isoelectric Point (pI)

43.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	139 - 290	1.7e-28	ABC transporter
AAA_29	PF13555	150 - 177	3.3e-06	P-loop containing region of AAA domain
ABC2_membrane_7	PF19055	320 - 374	2.5e-06	ABC-2 type transporter
ABC2_membrane	PF01061	439 - 650	2.7e-42	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000287)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20410 FvH4_1g20410 FvH4_6g39250 FvH4_6g39250
malus_domestica	MD00G1036800.v1.1 MD05G1042600.v1.1 MD10G1049900.v1.1
prunus_persica	Prupe.6G191500_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064400_v2.0.a1
pyrus_communis	pycom05g03520 pycom10g03500 pycom10g03510 pycom15g28250
rosa_chinensis	RchiOBHm_Chr1g0336561 RchiOBHm_Chr2g0112551 RchiOBHm_Chr2g0112561 RchiOBHm_Chr2g0112631 RchiOBHm_Chr2g0112641 RchiOBHm_Chr2g0153091 RchiOBHm_Chr2g0153111 RchiOBHm_Chr2g0153141 RchiOBHm_Chr2g0153161 RchiOBHm_Chr2g0153171
rosa_laevigata	RLG00000017991 RLG00000017992 RLG00000017995 RLG00000017997 RLG00000020676 RLG00000020677 RLG00000020678 RLG00000020682
rosa_multiflora	Rmu_co8208234.1_g000001 Rmu_co8218328.1_g000001 Rmu_co8425243.1_g000001 Rmu_sc0000218.1_g000037 Rmu_sc0000218.1_g000044 Rmu_sc0000218.1_g000047 Rmu_sc0000218.1_g000052 Rmu_sc0001155.1_g000011 Rmu_sc0001155.1_g000026 Rmu_sc0001155.1_g000029 Rmu_sc0001499.1_g000001 Rmu_sc0001499.1_g000040 Rmu_sc0002401.1_g000032 Rmu_sc0002401.1_g000033 Rmu_sc0004070.1_g000003 Rmu_sc0004070.1_g000004 Rmu_sc0005547.1_g000001 Rmu_sc0006062.1_g000002 Rmu_sc0009780.1_g000005 Rmu_sc0013071.1_g000001 Rmu_sc0013071.1_g000012
rosa_roxburghii	Rroxscaffold_2G00095130 Rroxscaffold_2G00095140 Rroxscaffold_2G00095160 Rroxscaffold_2G00095180 Rroxscaffold_2G00095190 Rroxscaffold_2G00095200 Rroxscaffold_2G00131290 Rroxscaffold_2G00131320 Rroxscaffold_2G00131350
rosa_rugosa	Rorug02G0181500 Rorug02G0181500 Rorug02G0181600 Rorug02G0181700 Rorug02G0437300 Rorug02G0437400
rosa_samantha	Rh1DG154100 Rh2AG235200 Rh2AG235300 Rh2AG235400 Rh2AG235600 Rh2AG235800 Rh2AG499700 Rh2AG499800 Rh2AG500000 Rh2AG500100 Rh2AG500200 Rh2BG248500 Rh2BG248700 Rh2BG248800 Rh2BG511000 Rh2BG511200 Rh2BG511300 Rh2BG511600 Rh2CG239600 Rh2CG239700 Rh2CG239900 Rh2CG240000 Rh2CG485900 Rh2CG486000 Rh2CG486200 Rh2CG486300 Rh2CG486400 Rh2DG242500 Rh2DG242600 Rh2DG242700 Rh2DG242900 Rh2DG243100 Rh2DG522800 Rh2DG523100 Rh2DG523200 Rh2DG523500 Rh2DG523600 Rh5DG200200
rosa_wichuraiana	Rw2G018200 Rw2G018210 Rw2G018230 Rw2G018240 Rw2G041010 Rw2G041020 Rw2G041030 Rw2G041050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1237
AccBSI	CCGCTC	1 cut(s)	710
AccI	GTMKAC	1 cut(s)	1026
AccII	CGCG	1 cut(s)	1359
AciI	CCGC	7 cut(s)	190, 207, 248, 285, 710, 789, 907
AcoI	YGGCCR	2 cut(s)	559, 793
AcsI	RAATTY	4 cut(s)	10, 177, 1815, 2010
AfaI	GTAC	4 cut(s)	596, 1898, 1919, 2139
AfiI	CCNNNNNNNGG	3 cut(s)	869, 1017, 1449
AflIII	ACRYGT	2 cut(s)	1350, 1608
AgeI	ACCGGT	1 cut(s)	1805
AhdI	GACNNNNNGTC	2 cut(s)	48, 682
AhlI	ACTAGT	1 cut(s)	866
AjiI	CACGTC	1 cut(s)	898
AjnI	CCWGG	1 cut(s)	442
AjuI	GAANNNNNNNTTGG	6 cut(s)	751, 783, 1143, 1175, 1308, 1340
AleI	CACNNNNGTG	1 cut(s)	1581
Alw26I	GTCTC	1 cut(s)	250
AoxI	GGCC	4 cut(s)	559, 793, 871, 1033
ApeKI	GCWGC	4 cut(s)	661, 664, 884, 1243
ApoI	RAATTY	4 cut(s)	10, 177, 1815, 2010
AseI	ATTAAT	1 cut(s)	1191
AsiGI	ACCGGT	1 cut(s)	1805
Asp700I	GAANNNNTTC	1 cut(s)	1550
AspLEI	GCGC	1 cut(s)	661
AspS9I	GGNCC	3 cut(s)	367, 467, 1452
AsuC2I	CCSGG	2 cut(s)	541, 1653
AsuHPI	GGTGA	4 cut(s)	320, 458, 917, 2015
AsuII	TTCGAA	1 cut(s)	218
AsuNHI	GCTAGC	1 cut(s)	919
AvaII	GGWCC	3 cut(s)	367, 467, 1452
BaeGI	GKGCMC	1 cut(s)	1578
BalI	TGGCCA	1 cut(s)	795
BarI	GAAGNNNNNNTAC	2 cut(s)	1998, 2030
BbsI	GAAGAC	2 cut(s)	1545, 1673
BbvI	GCAGC	4 cut(s)	651, 673, 896, 1230
BccI	CCATC	8 cut(s)	33, 131, 305, 383, 724, 926, 1108, 2032
BceAI	ACGGC	1 cut(s)	546
BciT130I	CCWGG	1 cut(s)	444
BciVI	GTATCC	1 cut(s)	2036
BclI	TGATCA	3 cut(s)	88, 292, 1696
BcnI	CCSGG	2 cut(s)	541, 1653
BcoDI	GTCTC	1 cut(s)	250
BcuI	ACTAGT	1 cut(s)	866
BfaI	CTAG	7 cut(s)	867, 875, 920, 966, 1014, 1254, 1283
BfmI	CTRYAG	3 cut(s)	120, 1244, 1659
BfuAI	ACCTGC	1 cut(s)	1237
BfuI	GTATCC	1 cut(s)	2036
BglII	AGATCT	2 cut(s)	546, 1548
BisI	GCNGC	4 cut(s)	662, 665, 885, 1244
BlsI	GCNGC	4 cut(s)	663, 666, 886, 1245
Bme1390I	CCNGG	3 cut(s)	444, 541, 1653
Bme18I	GGWCC	3 cut(s)	367, 467, 1452
BmeRI	GACNNNNNGTC	2 cut(s)	48, 682
BmgBI	CACGTC	1 cut(s)	898
BmgT120I	GGNCC	3 cut(s)	367, 467, 1452
BmiI	GGNNCC	3 cut(s)	468, 1441, 1453
BmrFI	CCNGG	3 cut(s)	444, 541, 1653
BmsI	GCATC	4 cut(s)	490, 959, 1464, 1821
BmtI	GCTAGC	1 cut(s)	923
BpiI	GAAGAC	2 cut(s)	1545, 1673
BpmI	CTGGAG	2 cut(s)	148, 1903
Bpu10I	CCTNAGC	1 cut(s)	1872
Bpu14I	TTCGAA	1 cut(s)	218
BpuEI	CTTGAG	1 cut(s)	588
BpuMI	CCSGG	2 cut(s)	541, 1653
Bsa29I	ATCGAT	1 cut(s)	953
BsaAI	YACGTR	1 cut(s)	598
BsaBI	GATNNNNATC	2 cut(s)	87, 551
BsaJI	CCNNGG	2 cut(s)	540, 747
BsaWI	WCCGGW	1 cut(s)	1805
BsaXI	ACNNNNNCTCC	4 cut(s)	719, 749, 1424, 1454
Bsc4I	CCNNNNNNNGG	3 cut(s)	869, 1017, 1449
Bse118I	RCCGGY	1 cut(s)	1805
Bse1I	ACTGG	2 cut(s)	264, 1379
Bse3DI	GCAATG	3 cut(s)	1395, 1715, 1902
Bse8I	GATNNNNATC	2 cut(s)	87, 551
BseBI	CCWGG	1 cut(s)	444
BseCI	ATCGAT	1 cut(s)	953
BseDI	CCNNGG	2 cut(s)	540, 747
BseGI	GGATG	1 cut(s)	505
BseJI	GATNNNNATC	2 cut(s)	87, 551
BseLI	CCNNNNNNNGG	3 cut(s)	869, 1017, 1449
BseMI	GCAATG	3 cut(s)	1395, 1715, 1902
BseMII	CTCAG	4 cut(s)	245, 269, 669, 1082
BseNI	ACTGG	2 cut(s)	264, 1379
BseRI	GAGGAG	1 cut(s)	1000
BseSI	GKGCMC	1 cut(s)	1578
BseXI	GCAGC	4 cut(s)	651, 673, 896, 1230
BsgI	GTGCAG	2 cut(s)	903, 2054
Bsh1236I	CGCG	1 cut(s)	1359
BshFI	GGCC	4 cut(s)	561, 795, 873, 1035
BshTI	ACCGGT	1 cut(s)	1805
BshVI	ATCGAT	1 cut(s)	953
BsiSI	CCGG	4 cut(s)	225, 540, 1653, 1806
BsiWI	CGTACG	1 cut(s)	594
BslFI	GGGAC	1 cut(s)	670
BslI	CCNNNNNNNGG	3 cut(s)	869, 1017, 1449
BsmAI	GTCTC	1 cut(s)	250
BsmFI	GGGAC	1 cut(s)	670
BsmI	GAATGC	2 cut(s)	1493, 1907
BsnI	GGCC	4 cut(s)	561, 795, 873, 1035
Bsp119I	TTCGAA	1 cut(s)	218
Bsp1286I	GDGCHC	1 cut(s)	1578
Bsp19I	CCATGG	1 cut(s)	747
Bsp68I	TCGCGA	1 cut(s)	1359
BspACI	CCGC	7 cut(s)	190, 207, 248, 285, 710, 789, 907
BspANI	GGCC	4 cut(s)	561, 795, 873, 1035
BspCNI	CTCAG	4 cut(s)	246, 270, 668, 1083
BspDI	ATCGAT	1 cut(s)	953
BspFNI	CGCG	1 cut(s)	1359
BspHI	TCATGA	1 cut(s)	900
BspLI	GGNNCC	3 cut(s)	468, 1441, 1453
BspMAI	CTGCAG	2 cut(s)	124, 1248
BspMI	ACCTGC	1 cut(s)	1237
BspOI	GCTAGC	1 cut(s)	923
BspT104I	TTCGAA	1 cut(s)	218
BsrBI	CCGCTC	1 cut(s)	710
BsrDI	GCAATG	3 cut(s)	1395, 1715, 1902
BsrFI	RCCGGY	1 cut(s)	1805
BsrI	ACTGG	2 cut(s)	264, 1379
BssAI	RCCGGY	1 cut(s)	1805
BssECI	CCNNGG	2 cut(s)	540, 747
BssT1I	CCWWGG	1 cut(s)	747
Bst2UI	CCWGG	1 cut(s)	444
Bst4CI	ACNGT	6 cut(s)	634, 881, 929, 943, 1024, 2003
Bst6I	CTCTTC	2 cut(s)	799, 854
BstBAI	YACGTR	1 cut(s)	598
BstBI	TTCGAA	1 cut(s)	218
BstC8I	GCNNGC	3 cut(s)	921, 1303, 1771
BstDEI	CTNAG	9 cut(s)	254, 278, 518, 655, 785, 1091, 1115, 1872, 2215
BstDSI	CCRYGG	1 cut(s)	747
BstENI	CCTNNNNNAGG	1 cut(s)	1015
BstF5I	GGATG	1 cut(s)	505
BstFNI	CGCG	1 cut(s)	1359
BstHHI	GCGC	1 cut(s)	661
BstMAI	GTCTC	1 cut(s)	250
BstMWI	GCNNNNNNNGC	6 cut(s)	670, 1046, 1173, 1240, 1365, 1712
BstNI	CCWGG	1 cut(s)	444
BstNSI	RCATGY	1 cut(s)	1354
BstSCI	CCNGG	3 cut(s)	442, 539, 1651
BstSFI	CTRYAG	3 cut(s)	120, 1244, 1659
BstSLI	GKGCMC	1 cut(s)	1578
BstUI	CGCG	1 cut(s)	1359
BstV1I	GCAGC	4 cut(s)	651, 673, 896, 1230
BstV2I	GAAGAC	2 cut(s)	1545, 1673
BstX2I	RGATCY	2 cut(s)	546, 1548
BstXI	CCANNNNNNTGG	1 cut(s)	1741
BstYI	RGATCY	2 cut(s)	546, 1548
Bsu15I	ATCGAT	1 cut(s)	953
BsuI	GTATCC	1 cut(s)	2036
BsuRI	GGCC	4 cut(s)	561, 795, 873, 1035
BsuTUI	ATCGAT	1 cut(s)	953
BtgI	CCRYGG	1 cut(s)	747
BtrI	CACGTC	1 cut(s)	898
BtsCI	GGATG	1 cut(s)	505
BtsI	GCAGTG	1 cut(s)	976
BtsIMutI	CAGTG	2 cut(s)	886, 976
BtuMI	TCGCGA	1 cut(s)	1359
BveI	ACCTGC	1 cut(s)	1237
Cac8I	GCNNGC	3 cut(s)	921, 1303, 1771
CciI	TCATGA	1 cut(s)	900
CfoI	GCGC	1 cut(s)	661
Cfr10I	RCCGGY	1 cut(s)	1805
Cfr13I	GGNCC	3 cut(s)	367, 467, 1452
ClaI	ATCGAT	1 cut(s)	953
CseI	GACGC	1 cut(s)	876
CsiI	ACCWGGT	1 cut(s)	442
Csp6I	GTAC	4 cut(s)	595, 1897, 1918, 2138
CspAI	ACCGGT	1 cut(s)	1805
CviQI	GTAC	4 cut(s)	595, 1897, 1918, 2138
DdeI	CTNAG	9 cut(s)	254, 278, 518, 655, 785, 1091, 1115, 1872, 2215
DraI	TTTAAA	1 cut(s)	202
DriI	GACNNNNNGTC	2 cut(s)	48, 682
EaeI	YGGCCR	2 cut(s)	559, 793
Eam1104I	CTCTTC	2 cut(s)	799, 854
Eam1105I	GACNNNNNGTC	2 cut(s)	48, 682
EarI	CTCTTC	2 cut(s)	799, 854
EciI	GGCGGA	1 cut(s)	237
Eco130I	CCWWGG	1 cut(s)	747
Eco32I	GATATC	2 cut(s)	1147, 1889
Eco47I	GGWCC	3 cut(s)	367, 467, 1452
EcoNI	CCTNNNNNAGG	1 cut(s)	1015
EcoO109I	RGGNCCY	2 cut(s)	367, 467
EcoRI	GAATTC	2 cut(s)	10, 1815
EcoRII	CCWGG	1 cut(s)	442
EcoRV	GATATC	2 cut(s)	1147, 1889
EcoT14I	CCWWGG	1 cut(s)	747
ErhI	CCWWGG	1 cut(s)	747
FalI	AAGNNNNNCTT	4 cut(s)	558, 590, 833, 865
FaqI	GGGAC	1 cut(s)	670
FauNDI	CATATG	1 cut(s)	93
FbaI	TGATCA	3 cut(s)	88, 292, 1696
FblI	GTMKAC	1 cut(s)	1026
Fnu4HI	GCNGC	4 cut(s)	662, 665, 885, 1244
FokI	GGATG	1 cut(s)	512
Fsp4HI	GCNGC	4 cut(s)	662, 665, 885, 1244
FspBI	CTAG	7 cut(s)	867, 875, 920, 966, 1014, 1254, 1283
GlaI	GCGC	1 cut(s)	660
GluI	GCNGC	4 cut(s)	662, 665, 885, 1244
GsuI	CTGGAG	2 cut(s)	148, 1903
HaeIII	GGCC	4 cut(s)	561, 795, 873, 1035
HapII	CCGG	4 cut(s)	225, 540, 1653, 1806
HgaI	GACGC	1 cut(s)	876
HhaI	GCGC	1 cut(s)	661
Hin6I	GCGC	1 cut(s)	659
HinP1I	GCGC	1 cut(s)	659
HindIII	AAGCTT	1 cut(s)	842
HpaII	CCGG	4 cut(s)	225, 540, 1653, 1806
HphI	GGTGA	4 cut(s)	320, 458, 917, 2015
Hpy166II	GTNNAC	5 cut(s)	1027, 1312, 1348, 2092, 2124
Hpy188I	TCNGA	8 cut(s)	82, 255, 584, 1092, 1105, 1853, 2172, 2218
Hpy188III	TCNNGA	9 cut(s)	239, 605, 829, 901, 1283, 1358, 1498, 1747, 1882
Hpy8I	GTNNAC	5 cut(s)	1027, 1312, 1348, 2092, 2124
HpyCH4III	ACNGT	6 cut(s)	634, 881, 929, 943, 1024, 2003
HpyCH4IV	ACGT	4 cut(s)	234, 597, 897, 1610
HpyF10VI	GCNNNNNNNGC	6 cut(s)	670, 1046, 1173, 1240, 1365, 1712
HpyF3I	CTNAG	9 cut(s)	254, 278, 518, 655, 785, 1091, 1115, 1872, 2215
HpySE526I	ACGT	4 cut(s)	234, 597, 897, 1610
HspAI	GCGC	1 cut(s)	659
Ksp22I	TGATCA	3 cut(s)	88, 292, 1696
LmnI	GCTCC	6 cut(s)	167, 250, 771, 1445, 1490, 1655
Lsp1109I	GCAGC	4 cut(s)	651, 673, 896, 1230
LweI	GCATC	4 cut(s)	490, 959, 1464, 1821
MabI	ACCWGGT	1 cut(s)	442
MaeI	CTAG	7 cut(s)	867, 875, 920, 966, 1014, 1254, 1283
MaeII	ACGT	4 cut(s)	234, 597, 897, 1610
MaeIII	GTNAC	3 cut(s)	424, 598, 1729
MbiI	CCGCTC	1 cut(s)	710
MflI	RGATCY	2 cut(s)	546, 1548
MhlI	GDGCHC	1 cut(s)	1578
MlsI	TGGCCA	1 cut(s)	795
MluNI	TGGCCA	1 cut(s)	795
MlyI	GAGTC	5 cut(s)	595, 671, 737, 826, 1081
MmeI	TCCRAC	4 cut(s)	749, 1468, 1582, 1876
Mox20I	TGGCCA	1 cut(s)	795
MroXI	GAANNNNTTC	1 cut(s)	1550
MscI	TGGCCA	1 cut(s)	795
MseI	TTAA	9 cut(s)	201, 551, 629, 915, 1191, 1227, 1646, 1998, 2221
MslI	CAYNNNNRTG	3 cut(s)	617, 930, 1581
Msp20I	TGGCCA	1 cut(s)	795
MspA1I	CMGCKG	2 cut(s)	664, 1243
MspI	CCGG	4 cut(s)	225, 540, 1653, 1806
MspR9I	CCNGG	3 cut(s)	444, 541, 1653
Mva1269I	GAATGC	2 cut(s)	1493, 1907
MvaI	CCWGG	1 cut(s)	444
MvnI	CGCG	1 cut(s)	1359
MwoI	GCNNNNNNNGC	6 cut(s)	670, 1046, 1173, 1240, 1365, 1712
NciI	CCSGG	2 cut(s)	541, 1653
NcoI	CCATGG	1 cut(s)	747
NdeI	CATATG	1 cut(s)	93
NheI	GCTAGC	1 cut(s)	919
NlaIV	GGNNCC	3 cut(s)	468, 1441, 1453
NmuCI	GTSAC	2 cut(s)	598, 1729
NruI	TCGCGA	1 cut(s)	1359
NspI	RCATGY	1 cut(s)	1354
NspV	TTCGAA	1 cut(s)	218
OliI	CACNNNNGTG	1 cut(s)	1581
PagI	TCATGA	1 cut(s)	900
PciI	ACATGT	1 cut(s)	1350
PctI	GAATGC	2 cut(s)	1493, 1907
PdmI	GAANNNNTTC	1 cut(s)	1550
PfeI	GAWTC	7 cut(s)	116, 263, 955, 1074, 1521, 1932, 2112
Pfl23II	CGTACG	1 cut(s)	594
PfoI	TCCNGGA	1 cut(s)	1651
PinAI	ACCGGT	1 cut(s)	1805
PkrI	GCNGC	4 cut(s)	663, 666, 886, 1245
PleI	GAGTC	5 cut(s)	595, 671, 737, 826, 1081
PpsI	GAGTC	5 cut(s)	595, 671, 737, 826, 1081
Ppu21I	YACGTR	1 cut(s)	598
PpuMI	RGGWCCY	2 cut(s)	367, 467
PscI	ACATGT	1 cut(s)	1350
PshBI	ATTAAT	1 cut(s)	1191
Psp5II	RGGWCCY	2 cut(s)	367, 467
Psp6I	CCWGG	1 cut(s)	442
PspGI	CCWGG	1 cut(s)	442
PspLI	CGTACG	1 cut(s)	594
PspN4I	GGNNCC	3 cut(s)	468, 1441, 1453
PspPI	GGNCC	3 cut(s)	367, 467, 1452
PspPPI	RGGWCCY	2 cut(s)	367, 467
PstI	CTGCAG	2 cut(s)	124, 1248
PsuI	RGATCY	2 cut(s)	546, 1548
PvuII	CAGCTG	2 cut(s)	664, 1243
RruI	TCGCGA	1 cut(s)	1359
RsaI	GTAC	4 cut(s)	596, 1898, 1919, 2139
RsaNI	GTAC	4 cut(s)	595, 1897, 1918, 2138
RseI	CAYNNNNRTG	3 cut(s)	617, 930, 1581
SaqAI	TTAA	9 cut(s)	201, 551, 629, 915, 1191, 1227, 1646, 1998, 2221
SatI	GCNGC	4 cut(s)	662, 665, 885, 1244
Sau96I	GGNCC	3 cut(s)	367, 467, 1452
SchI	GAGTC	5 cut(s)	595, 671, 737, 826, 1081
ScrFI	CCNGG	3 cut(s)	444, 541, 1653
SduI	GDGCHC	1 cut(s)	1578
SexAI	ACCWGGT	1 cut(s)	442
SfaNI	GCATC	4 cut(s)	490, 959, 1464, 1821
SfcI	CTRYAG	3 cut(s)	120, 1244, 1659
SfuI	TTCGAA	1 cut(s)	218
SinI	GGWCC	3 cut(s)	367, 467, 1452
SmiMI	CAYNNNNRTG	3 cut(s)	617, 930, 1581
SmlI	CTYRAG	1 cut(s)	603
SmoI	CTYRAG	1 cut(s)	603
SpeI	ACTAGT	1 cut(s)	866
SsiI	CCGC	7 cut(s)	190, 207, 248, 285, 710, 789, 907
SspI	AATATT	2 cut(s)	1195, 1225
SspMI	CTAG	7 cut(s)	867, 875, 920, 966, 1014, 1254, 1283
StyD4I	CCNGG	3 cut(s)	442, 539, 1651
StyI	CCWWGG	1 cut(s)	747
TaaI	ACNGT	6 cut(s)	634, 881, 929, 943, 1024, 2003
TaiI	ACGT	4 cut(s)	237, 600, 900, 1613
TaqII	GACCGA	1 cut(s)	1667
TatI	WGTACW	1 cut(s)	1896
TfiI	GAWTC	7 cut(s)	116, 263, 955, 1074, 1521, 1932, 2112
Tru1I	TTAA	9 cut(s)	201, 551, 629, 915, 1191, 1227, 1646, 1998, 2221
Tru9I	TTAA	9 cut(s)	201, 551, 629, 915, 1191, 1227, 1646, 1998, 2221
TscAI	CASTG	2 cut(s)	886, 976
TseFI	GTSAC	2 cut(s)	598, 1729
TseI	GCWGC	4 cut(s)	661, 664, 884, 1243
Tsp45I	GTSAC	2 cut(s)	598, 1729
TspDTI	ATGAA	5 cut(s)	917, 947, 1495, 1559, 1941
TspGWI	ACGGA	2 cut(s)	256, 1854
TspRI	CASTG	2 cut(s)	886, 976
VpaK11BI	GGWCC	3 cut(s)	367, 467, 1452
VspI	ATTAAT	1 cut(s)	1191
XagI	CCTNNNNNAGG	1 cut(s)	1015
XapI	RAATTY	4 cut(s)	10, 177, 1815, 2010
XbaI	TCTAGA	1 cut(s)	1282
XceI	RCATGY	1 cut(s)	1354
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1271
XmiI	GTMKAC	1 cut(s)	1026
XmnI	GAANNNNTTC	1 cut(s)	1550
XspI	CTAG	7 cut(s)	867, 875, 920, 966, 1014, 1254, 1283

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.