Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0000287

Physical Location & Seq

Genomic Coordinates Reverse (-)

24916827 .. 24927181

Gene Structure 10355 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG239900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGGAGTCTTCTTCTTCTCCTGCCAACTTTCCAAGATGGGCACCAAGTCCAAGCCCCTCAAGATTATTACTATCACCAGTGGAAGACACCAAGATCAAGTCGAGTAGTGCTGCTCATGATTCTGCAGAAGATGGCATATCCTTATCATGTTCTAGCATGGAAAGGATTTTCCCATTTAGCATTGGATTCAAAAGCACTACTACTAGTACTGCTTATGCTTCGGCGGTTGAAAAGTCAGAAGCTGAAAATGCTTATGTCCGAAGGAGTGGTGCTACTGATGTTGAACTTGGGTCAAGAGAGAATGGTATTTCTTTGACATGGGAGGACTTGTGGGTCGGGGTAGGTGATGGGAAAAGTGGGCAGAAGATGATTTTGCAGGGGCTTACTGGGTTTGCTCAACCTGGTGAGGTTTTGGCTATAATGGGTCCTTCTGGCTGTGGCAAATCTACCCTTTTGGATGCTTTGGCAGGAAGGCCAAGTTCAAACGCACAGCAGAGAGGAAAGATCCTAATCAATGGCCGGAAAGAAACTCTTGCCTACGGAACCTCGGCATATGTGACACAAGATGACACGCTAATGACAACATTAACAGTAAGGGAAGTTGTGTATTACTCGGCTCAACTACAACTCCCTAACTCCATGTCGAAAACAGAAAAGAAGGAAAGAGCAGAGACGACGATAAGGGAGATGGGTTTGCAAGACTCCATGGACACAAGAATTGGAGGTTGGAGCAGAAAAGGCCTCAGTGGTGGACAAAAAAGAAGAGTTAGCATCTGTATTGAAATCTTAACTCGTCCGAAGCTTCTATTCCTTGATGAGCCTACTAGTGGACTAGACAGTGCAGCATCTTACCATGTCATGAACCGCATTATTAAATTGGCTCACCGTGATGGAAGGACTGTCATTTCATCAATTCATCAACCTAGCAGTGAAGTGTTTGAGCTTTTCCAAAATCTTTGTCTTCTCTCCTCTGGTATAACCGTCTATTTTGGCCCTGCTTCAAAGGCAGAACAGTTCTTTGCTTCAAATAGCTTCCCATGTCCAACTATGACAAACCCATCGGATCATTACCTTAGAACAATTAACAAGGACTTTGATGTTGAAATGATCGATGGCAAAACAAGCACTGAGGAAGCAATCAATATTCTCATAAGGTCATACGAGTCTTCAAATACTTTAAAGCAAGTTCATCTCAAGGTAAATGAGATTTGCCAACAGGGAGGTGGAGCTCTGGAGAAGGGACGCCAAACCAACTTCATAACTCAATGCCTGGTTTTGACAAGGAGATCATTTGTGAACATGTATCGCGATCTAGGCTACTACTGGCTTCGACTTGCAATTTACATTGCCTTGTGCTTATGTGTAGGGACTATTTTTCAGGACATCGGCTTGACTTTTGGGTCAATACAGGCTAGAGGATCAATGCTCATGTTTGTTGCAGCATTCTTAACTTTCATGGCAATAGGTGGATTTCCTTCTTTTGTAGAAGACATGAAGATTTTCGAGCGTGAAAGATTAAACGGGCACTATGGCGTTGCTGCATATGTGGTTGGAAACACACTTTCCTCCATTCCATATTTGCTAATGGTATCTTTAATTCCTGGAGCAATTGCCTATTACCTTGTTGGCCTTCAGAAGAGCTCTGACCACTTCGCCTATTTTGCATTGGTTCTATTTGTGTGTCTGATGTTGGTTGAGAGCCTGATGATGATTGTAGCAAGCACTGTGCCAGATTTCCTCATGGGGATCATCACAGGTGCTGGAATTCAAGGAATAATGATGTTGAATGGAGGTTTCTTCCGTTTACCAGACGATCTTCCGAAGCCCTTTTGGAGATACCCAATGTACTACATTGCATTCCACAAATACGCAAATCAAGGATTCTACAAGAATGAGTTTGAAGGACTTACATTTCCCAATAACCAAGCAGGAGGGCCACCCACCATTACAGGTGAAGAAATATTAAAGGGTACTTGGCAAGTGGAGATGGGCTATTCTAAGTGGGTTGATCTTGCTATTTTGTTGGGAATGGTAATTGTTTACAGGCTCATTTTTTTGGGAATAATAAAGATAAGTGAAAAGGTTGTGCCAATGATCAAAGCTCTTCTTGTTGGTGTTCCCAAACACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005319 GO:0005342 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006950 GO:0006970 GO:0007275 GO:0007389 GO:0008028 GO:0008150 GO:0008509 GO:0008514 GO:0009611 GO:0009628 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0009897 GO:0009965 GO:0009986 GO:0010016 GO:0010033 GO:0010051 GO:0010154 GO:0010222 GO:0010588 GO:0010876 GO:0015075 GO:0015245 GO:0015318 GO:0015399 GO:0015405 GO:0015711 GO:0015718 GO:0015849 GO:0015908 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0022804 GO:0022857 GO:0031224 GO:0032501 GO:0032502 GO:0033036 GO:0033993 GO:0034220 GO:0042221 GO:0042623 GO:0042626 GO:0042802 GO:0042803 GO:0043492 GO:0044425 GO:0044459 GO:0044464 GO:0046942 GO:0046943 GO:0046983 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071702 GO:0071944 GO:0080051 GO:0090698 GO:0097305 GO:0098552 GO:0098656 GO:0099402 GO:1901700 GO:1903825 GO:1905039 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

709

Amino Acids

78.16

Weight (kDa)

7.91

Isoelectric Point (pI)

40.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	129 - 276	1.6e-28	ABC transporter
ABC2_membrane_7	PF19055	306 - 362	2.7e-09	ABC-2 type transporter
ABC2_membrane	PF01061	421 - 633	4.6e-43	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0000287)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20410 FvH4_1g20410 FvH4_6g39250 FvH4_6g39250
malus_domestica	MD00G1036800.v1.1 MD05G1042600.v1.1 MD10G1049900.v1.1
prunus_persica	Prupe.6G191500_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064400_v2.0.a1
pyrus_communis	pycom05g03520 pycom10g03500 pycom10g03510 pycom15g28250
rosa_chinensis	RchiOBHm_Chr1g0336561 RchiOBHm_Chr2g0112551 RchiOBHm_Chr2g0112561 RchiOBHm_Chr2g0112631 RchiOBHm_Chr2g0112641 RchiOBHm_Chr2g0153091 RchiOBHm_Chr2g0153111 RchiOBHm_Chr2g0153141 RchiOBHm_Chr2g0153161 RchiOBHm_Chr2g0153171
rosa_laevigata	RLG00000017991 RLG00000017992 RLG00000017995 RLG00000017997 RLG00000020676 RLG00000020677 RLG00000020678 RLG00000020682
rosa_multiflora	Rmu_co8208234.1_g000001 Rmu_co8218328.1_g000001 Rmu_co8425243.1_g000001 Rmu_sc0000218.1_g000037 Rmu_sc0000218.1_g000044 Rmu_sc0000218.1_g000047 Rmu_sc0000218.1_g000052 Rmu_sc0001155.1_g000011 Rmu_sc0001155.1_g000026 Rmu_sc0001155.1_g000029 Rmu_sc0001499.1_g000001 Rmu_sc0001499.1_g000040 Rmu_sc0002401.1_g000032 Rmu_sc0002401.1_g000033 Rmu_sc0004070.1_g000003 Rmu_sc0004070.1_g000004 Rmu_sc0005547.1_g000001 Rmu_sc0006062.1_g000002 Rmu_sc0009780.1_g000005 Rmu_sc0013071.1_g000001 Rmu_sc0013071.1_g000012
rosa_roxburghii	Rroxscaffold_2G00095130 Rroxscaffold_2G00095140 Rroxscaffold_2G00095160 Rroxscaffold_2G00095180 Rroxscaffold_2G00095190 Rroxscaffold_2G00095200 Rroxscaffold_2G00131290 Rroxscaffold_2G00131320 Rroxscaffold_2G00131350
rosa_rugosa	Rorug02G0181500 Rorug02G0181500 Rorug02G0181600 Rorug02G0181700 Rorug02G0437300 Rorug02G0437400
rosa_samantha	Rh1DG154100 Rh2AG235200 Rh2AG235300 Rh2AG235400 Rh2AG235600 Rh2AG235800 Rh2AG499700 Rh2AG499800 Rh2AG500000 Rh2AG500100 Rh2AG500200 Rh2BG248500 Rh2BG248700 Rh2BG248800 Rh2BG511000 Rh2BG511200 Rh2BG511300 Rh2BG511600 Rh2CG239600 Rh2CG239700 Rh2CG239900 Rh2CG240000 Rh2CG485900 Rh2CG486000 Rh2CG486200 Rh2CG486300 Rh2CG486400 Rh2DG242500 Rh2DG242600 Rh2DG242700 Rh2DG242900 Rh2DG243100 Rh2DG522800 Rh2DG523100 Rh2DG523200 Rh2DG523500 Rh2DG523600 Rh5DG200200
rosa_wichuraiana	Rw2G018200 Rw2G018210 Rw2G018230 Rw2G018240 Rw2G041010 Rw2G041020 Rw2G041030 Rw2G041050

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	332, 1399
AccB1I	GGYRCC	1 cut(s)	40
AccII	CGCG	1 cut(s)	1308
AciI	CCGC	2 cut(s)	224, 865
AclWI	GGATC	4 cut(s)	499, 1071, 1426, 1754
AcoI	YGGCCR	1 cut(s)	517
AcsI	RAATTY	1 cut(s)	1764
AcuI	CTGAAG	1 cut(s)	1616
AcyI	GRCGYC	1 cut(s)	1243
AfaI	GTAC	3 cut(s)	208, 1847, 1972
AfiI	CCNNNNNNNGG	1 cut(s)	827
AflIII	ACRYGT	1 cut(s)	1299
AhlI	ACTAGT	2 cut(s)	203, 824
AjnI	CCWGG	3 cut(s)	400, 1269, 1600
AjuI	GAANNNNNNNTTGG	2 cut(s)	709, 741
AluBI	AGCT	7 cut(s)	242, 802, 943, 1032, 1229, 1641, 2102
AluI	AGCT	7 cut(s)	242, 802, 943, 1032, 1229, 1641, 2102
Alw21I	GWGCWC	2 cut(s)	1231, 1643
Alw26I	GTCTC	1 cut(s)	665
AlwI	GGATC	4 cut(s)	499, 1071, 1426, 1754
AlwNI	CAGNNNCTG	2 cut(s)	242, 1760
AoxI	GGCC	6 cut(s)	473, 517, 739, 991, 1627, 1934
ApeKI	GCWGC	4 cut(s)	110, 842, 1439, 1538
ApoI	RAATTY	1 cut(s)	1764
ArsI	GACNNNNNNTTYG	2 cut(s)	943, 975
Asp700I	GAANNNNTTC	1 cut(s)	1499
AspS9I	GGNCC	3 cut(s)	425, 992, 1934
AsuHPI	GGTGA	5 cut(s)	66, 356, 416, 875, 1964
AvaII	GGWCC	1 cut(s)	425
BaeGI	GKGCMC	2 cut(s)	43, 1527
BanI	GGYRCC	1 cut(s)	40
BanII	GRGCYC	2 cut(s)	1231, 1643
BbsI	GAAGAC	4 cut(s)	90, 953, 1158, 1494
Bbv12I	GWGCWC	2 cut(s)	1231, 1643
BbvI	GCAGC	4 cut(s)	97, 854, 1451, 1525
BccI	CCATC	8 cut(s)	30, 125, 341, 682, 884, 1066, 1106, 1981
BciT130I	CCWGG	3 cut(s)	402, 1271, 1602
BclI	TGATCA	1 cut(s)	2094
BcoDI	GTCTC	1 cut(s)	665
BcuI	ACTAGT	2 cut(s)	203, 824
BfaI	CTAG	7 cut(s)	153, 204, 825, 833, 924, 1313, 1413
BfmI	CTRYAG	1 cut(s)	123
BisI	GCNGC	4 cut(s)	111, 843, 1440, 1539
BlsI	GCNGC	4 cut(s)	112, 844, 1441, 1540
BmcAI	AGTACT	1 cut(s)	208
Bme1390I	CCNGG	3 cut(s)	402, 1271, 1602
Bme18I	GGWCC	1 cut(s)	425
BmgT120I	GGNCC	3 cut(s)	425, 992, 1934
BmiI	GGNNCC	3 cut(s)	42, 426, 544
BmrFI	CCNGG	3 cut(s)	402, 1271, 1602
BmrI	ACTGGG	1 cut(s)	396
BmsI	GCATC	3 cut(s)	448, 780, 854
BmuI	ACTGGG	1 cut(s)	396
BpiI	GAAGAC	4 cut(s)	90, 953, 1158, 1494
BpmI	CTGGAG	2 cut(s)	1253, 1623
BpuEI	CTTGAG	2 cut(s)	43, 1178
Bsa29I	ATCGAT	1 cut(s)	1110
BsaBI	GATNNNNATC	1 cut(s)	509
BsaHI	GRCGYC	1 cut(s)	1243
BsaJI	CCNNGG	2 cut(s)	546, 705
BsaXI	ACNNNNNCTCC	4 cut(s)	314, 344, 612, 642
Bsc4I	CCNNNNNNNGG	1 cut(s)	827
Bse1I	ACTGG	3 cut(s)	77, 391, 1328
Bse3DI	GCAATG	2 cut(s)	1344, 1851
Bse8I	GATNNNNATC	1 cut(s)	509
BseBI	CCWGG	3 cut(s)	402, 1271, 1602
BseCI	ATCGAT	1 cut(s)	1110
BseDI	CCNNGG	2 cut(s)	546, 705
BseGI	GGATG	1 cut(s)	463
BseJI	GATNNNNATC	1 cut(s)	509
BseLI	CCNNNNNNNGG	1 cut(s)	827
BseMI	GCAATG	2 cut(s)	1344, 1851
BseMII	CTCAG	2 cut(s)	757, 1119
BseNI	ACTGG	3 cut(s)	77, 391, 1328
BseRI	GAGGAG	1 cut(s)	958
BseSI	GKGCMC	2 cut(s)	43, 1527
BseXI	GCAGC	4 cut(s)	97, 854, 1451, 1525
BsgI	GTGCAG	1 cut(s)	861
Bsh1236I	CGCG	1 cut(s)	1308
BshFI	GGCC	6 cut(s)	475, 519, 741, 993, 1629, 1936
BshNI	GGYRCC	1 cut(s)	40
BshVI	ATCGAT	1 cut(s)	1110
BsiHKAI	GWGCWC	2 cut(s)	1231, 1643
BsiSI	CCGG	1 cut(s)	520
BslFI	GGGAC	2 cut(s)	1254, 1381
BslI	CCNNNNNNNGG	1 cut(s)	827
BsmAI	GTCTC	1 cut(s)	665
BsmBI	CGTCTC	1 cut(s)	665
BsmFI	GGGAC	2 cut(s)	1254, 1381
BsmI	GAATGC	2 cut(s)	1442, 1856
BsnI	GGCC	6 cut(s)	475, 519, 741, 993, 1629, 1936
Bsp1286I	GDGCHC	4 cut(s)	43, 1231, 1527, 1643
Bsp19I	CCATGG	1 cut(s)	705
Bsp68I	TCGCGA	1 cut(s)	1308
BspACI	CCGC	2 cut(s)	224, 865
BspANI	GGCC	6 cut(s)	475, 519, 741, 993, 1629, 1936
BspCNI	CTCAG	2 cut(s)	756, 1120
BspDI	ATCGAT	1 cut(s)	1110
BspFNI	CGCG	1 cut(s)	1308
BspHI	TCATGA	2 cut(s)	115, 858
BspLI	GGNNCC	3 cut(s)	42, 426, 544
BspMAI	CTGCAG	1 cut(s)	127
BspPI	GGATC	4 cut(s)	499, 1071, 1426, 1754
BspQI	GCTCTTC	2 cut(s)	1631, 2109
BspT107I	GGYRCC	1 cut(s)	40
BsrDI	GCAATG	2 cut(s)	1344, 1851
BsrI	ACTGG	3 cut(s)	77, 391, 1328
BssECI	CCNNGG	2 cut(s)	546, 705
BssNI	GRCGYC	1 cut(s)	1243
BssT1I	CCWWGG	1 cut(s)	705
Bst2UI	CCWGG	3 cut(s)	402, 1271, 1602
Bst4CI	ACNGT	7 cut(s)	592, 839, 887, 901, 982, 1014, 1726
Bst6I	CTCTTC	3 cut(s)	757, 1631, 2109
BstACI	GRCGYC	1 cut(s)	1243
BstC8I	GCNNGC	1 cut(s)	1720
BstDEI	CTNAG	4 cut(s)	743, 1073, 1128, 1998
BstDSI	CCRYGG	1 cut(s)	705
BstF5I	GGATG	1 cut(s)	463
BstFNI	CGCG	1 cut(s)	1308
BstMAI	GTCTC	1 cut(s)	665
BstMWI	GCNNNNNNNGC	6 cut(s)	248, 738, 1004, 1122, 1314, 1661
BstNI	CCWGG	3 cut(s)	402, 1271, 1602
BstNSI	RCATGY	1 cut(s)	1303
BstSCI	CCNGG	3 cut(s)	400, 1269, 1600
BstSFI	CTRYAG	1 cut(s)	123
BstSLI	GKGCMC	2 cut(s)	43, 1527
BstUI	CGCG	1 cut(s)	1308
BstV1I	GCAGC	4 cut(s)	97, 854, 1451, 1525
BstV2I	GAAGAC	4 cut(s)	90, 953, 1158, 1494
BstX2I	RGATCY	1 cut(s)	504
BstYI	RGATCY	1 cut(s)	504
Bsu15I	ATCGAT	1 cut(s)	1110
BsuRI	GGCC	6 cut(s)	475, 519, 741, 993, 1629, 1936
BsuTUI	ATCGAT	1 cut(s)	1110
BtgI	CCRYGG	1 cut(s)	705
BtsCI	GGATG	1 cut(s)	463
BtsI	GCAGTG	1 cut(s)	934
BtsIMutI	CAGTG	7 cut(s)	84, 751, 844, 934, 1125, 1722, 2125
BtuMI	TCGCGA	1 cut(s)	1308
Cac8I	GCNNGC	1 cut(s)	1720
CaiI	CAGNNNCTG	2 cut(s)	242, 1760
CciI	TCATGA	2 cut(s)	115, 858
Cfr13I	GGNCC	3 cut(s)	425, 992, 1934
ClaI	ATCGAT	1 cut(s)	1110
CseI	GACGC	1 cut(s)	1251
CsiI	ACCWGGT	1 cut(s)	400
Csp6I	GTAC	3 cut(s)	207, 1846, 1971
CviQI	GTAC	3 cut(s)	207, 1846, 1971
DdeI	CTNAG	4 cut(s)	743, 1073, 1128, 1998
DraI	TTTAAA	1 cut(s)	1179
DrdI	GACNNNNNNGTC	2 cut(s)	332, 1399
DseDI	GACNNNNNNGTC	2 cut(s)	332, 1399
EaeI	YGGCCR	1 cut(s)	517
Eam1104I	CTCTTC	3 cut(s)	757, 1631, 2109
EarI	CTCTTC	3 cut(s)	757, 1631, 2109
Ecl136II	GAGCTC	2 cut(s)	1229, 1641
Eco130I	CCWWGG	1 cut(s)	705
Eco147I	AGGCCT	1 cut(s)	741
Eco24I	GRGCYC	2 cut(s)	1231, 1643
Eco47I	GGWCC	1 cut(s)	425
Eco53kI	GAGCTC	2 cut(s)	1229, 1641
Eco57I	CTGAAG	1 cut(s)	1616
EcoICRI	GAGCTC	2 cut(s)	1229, 1641
EcoO109I	RGGNCCY	1 cut(s)	425
EcoRI	GAATTC	1 cut(s)	1764
EcoRII	CCWGG	3 cut(s)	400, 1269, 1600
EcoT14I	CCWWGG	1 cut(s)	705
EcoT38I	GRGCYC	2 cut(s)	1231, 1643
ErhI	CCWWGG	1 cut(s)	705
Esp3I	CGTCTC	1 cut(s)	665
FalI	AAGNNNNNCTT	4 cut(s)	516, 548, 2091, 2123
FaqI	GGGAC	2 cut(s)	1254, 1381
FauNDI	CATATG	2 cut(s)	553, 1543
FbaI	TGATCA	1 cut(s)	2094
Fnu4HI	GCNGC	4 cut(s)	111, 843, 1440, 1539
FokI	GGATG	1 cut(s)	470
FriOI	GRGCYC	2 cut(s)	1231, 1643
Fsp4HI	GCNGC	4 cut(s)	111, 843, 1440, 1539
FspBI	CTAG	7 cut(s)	153, 204, 825, 833, 924, 1313, 1413
GluI	GCNGC	4 cut(s)	111, 843, 1440, 1539
GsuI	CTGGAG	2 cut(s)	1253, 1623
HaeIII	GGCC	6 cut(s)	475, 519, 741, 993, 1629, 1936
HapII	CCGG	1 cut(s)	520
HgaI	GACGC	1 cut(s)	1251
Hin1I	GRCGYC	1 cut(s)	1243
HindIII	AAGCTT	1 cut(s)	800
HinfI	GANTC	6 cut(s)	5, 119, 186, 701, 1163, 1881
HpaII	CCGG	1 cut(s)	520
HphI	GGTGA	5 cut(s)	66, 356, 416, 875, 1964
Hpy166II	GTNNAC	5 cut(s)	752, 830, 1297, 1805, 2041
Hpy188I	TCNGA	8 cut(s)	238, 260, 798, 1063, 1635, 1645, 1686, 1821
Hpy188III	TCNNGA	7 cut(s)	60, 116, 294, 859, 1232, 1307, 1379
Hpy8I	GTNNAC	5 cut(s)	752, 830, 1297, 1805, 2041
Hpy99I	CGWCG	1 cut(s)	679
HpyAV	CCTTC	9 cut(s)	255, 438, 465, 652, 888, 1231, 1485, 1640, 1895
HpyCH4III	ACNGT	7 cut(s)	592, 839, 887, 901, 982, 1014, 1726
HpyCH4V	TGCA	9 cut(s)	125, 376, 697, 842, 1337, 1439, 1541, 1664, 1856
HpyF10VI	GCNNNNNNNGC	6 cut(s)	248, 738, 1004, 1122, 1314, 1661
HpyF3I	CTNAG	4 cut(s)	743, 1073, 1128, 1998
Hsp92I	GRCGYC	1 cut(s)	1243
Ksp22I	TGATCA	1 cut(s)	2094
LguI	GCTCTTC	2 cut(s)	1631, 2109
LmnI	GCTCC	3 cut(s)	729, 1226, 1604
Lsp1109I	GCAGC	4 cut(s)	97, 854, 1451, 1525
LweI	GCATC	3 cut(s)	448, 780, 854
MabI	ACCWGGT	1 cut(s)	400
MaeI	CTAG	7 cut(s)	153, 204, 825, 833, 924, 1313, 1413
MaeIII	GTNAC	1 cut(s)	556
MfeI	CAATTG	1 cut(s)	1608
MflI	RGATCY	1 cut(s)	504
MhlI	GDGCHC	4 cut(s)	43, 1231, 1527, 1643
MluCI	AATT	9 cut(s)	717, 875, 912, 1080, 1338, 1596, 1608, 1764, 2034
MlyI	GAGTC	3 cut(s)	14, 695, 1172
MmeI	TCCRAC	3 cut(s)	707, 1067, 1531
MroXI	GAANNNNTTC	1 cut(s)	1499
MseI	TTAA	9 cut(s)	587, 788, 873, 1083, 1178, 1448, 1517, 1595, 1964
MslI	CAYNNNNRTG	2 cut(s)	575, 888
MspI	CCGG	1 cut(s)	520
MspR9I	CCNGG	3 cut(s)	402, 1271, 1602
MunI	CAATTG	1 cut(s)	1608
Mva1269I	GAATGC	2 cut(s)	1442, 1856
MvaI	CCWGG	3 cut(s)	402, 1271, 1602
MvnI	CGCG	1 cut(s)	1308
MwoI	GCNNNNNNNGC	6 cut(s)	248, 738, 1004, 1122, 1314, 1661
NcoI	CCATGG	1 cut(s)	705
NdeI	CATATG	2 cut(s)	553, 1543
NlaIV	GGNNCC	3 cut(s)	42, 426, 544
NmeAIII	GCCGAG	2 cut(s)	527, 593
NmuCI	GTSAC	1 cut(s)	556
NruI	TCGCGA	1 cut(s)	1308
NspI	RCATGY	1 cut(s)	1303
PagI	TCATGA	2 cut(s)	115, 858
PceI	AGGCCT	1 cut(s)	741
PciI	ACATGT	1 cut(s)	1299
PciSI	GCTCTTC	2 cut(s)	1631, 2109
PctI	GAATGC	2 cut(s)	1442, 1856
PdmI	GAANNNNTTC	1 cut(s)	1499
PfeI	GAWTC	3 cut(s)	119, 186, 1881
PfoI	TCCNGGA	1 cut(s)	1600
PkrI	GCNGC	4 cut(s)	112, 844, 1441, 1540
PleI	GAGTC	3 cut(s)	13, 695, 1171
PpsI	GAGTC	3 cut(s)	13, 695, 1171
PpuMI	RGGWCCY	1 cut(s)	425
PscI	ACATGT	1 cut(s)	1299
Psp124BI	GAGCTC	2 cut(s)	1231, 1643
Psp5II	RGGWCCY	1 cut(s)	425
Psp6I	CCWGG	3 cut(s)	400, 1269, 1600
PspGI	CCWGG	3 cut(s)	400, 1269, 1600
PspN4I	GGNNCC	3 cut(s)	42, 426, 544
PspPI	GGNCC	3 cut(s)	425, 992, 1934
PspPPI	RGGWCCY	1 cut(s)	425
PstI	CTGCAG	1 cut(s)	127
PstNI	CAGNNNCTG	2 cut(s)	242, 1760
PsuI	RGATCY	1 cut(s)	504
RruI	TCGCGA	1 cut(s)	1308
RsaI	GTAC	3 cut(s)	208, 1847, 1972
RsaNI	GTAC	3 cut(s)	207, 1846, 1971
RseI	CAYNNNNRTG	2 cut(s)	575, 888
SacI	GAGCTC	2 cut(s)	1231, 1643
SapI	GCTCTTC	2 cut(s)	1631, 2109
SaqAI	TTAA	9 cut(s)	587, 788, 873, 1083, 1178, 1448, 1517, 1595, 1964
SatI	GCNGC	4 cut(s)	111, 843, 1440, 1539
Sau96I	GGNCC	3 cut(s)	425, 992, 1934
ScaI	AGTACT	1 cut(s)	208
SchI	GAGTC	3 cut(s)	14, 695, 1172
ScrFI	CCNGG	3 cut(s)	402, 1271, 1602
SduI	GDGCHC	4 cut(s)	43, 1231, 1527, 1643
SexAI	ACCWGGT	1 cut(s)	400
SfaNI	GCATC	3 cut(s)	448, 780, 854
SfcI	CTRYAG	1 cut(s)	123
SinI	GGWCC	1 cut(s)	425
SmiMI	CAYNNNNRTG	2 cut(s)	575, 888
SmlI	CTYRAG	2 cut(s)	58, 1193
SmoI	CTYRAG	2 cut(s)	58, 1193
SpeI	ACTAGT	2 cut(s)	203, 824
Sse9I	AATT	9 cut(s)	717, 875, 912, 1080, 1338, 1596, 1608, 1764, 2034
SseBI	AGGCCT	1 cut(s)	741
SsiI	CCGC	2 cut(s)	224, 865
SspI	AATATT	2 cut(s)	1144, 1962
SspMI	CTAG	7 cut(s)	153, 204, 825, 833, 924, 1313, 1413
SstI	GAGCTC	2 cut(s)	1231, 1643
StuI	AGGCCT	1 cut(s)	741
StyD4I	CCNGG	3 cut(s)	400, 1269, 1600
StyI	CCWWGG	1 cut(s)	705
TaaI	ACNGT	7 cut(s)	592, 839, 887, 901, 982, 1014, 1726
TaqI	TCGA	5 cut(s)	101, 644, 1110, 1330, 1503
TasI	AATT	9 cut(s)	717, 875, 912, 1080, 1338, 1596, 1608, 1764, 2034
TatI	WGTACW	2 cut(s)	206, 1845
TfiI	GAWTC	3 cut(s)	119, 186, 1881
Tru1I	TTAA	9 cut(s)	587, 788, 873, 1083, 1178, 1448, 1517, 1595, 1964
Tru9I	TTAA	9 cut(s)	587, 788, 873, 1083, 1178, 1448, 1517, 1595, 1964
TscAI	CASTG	6 cut(s)	84, 751, 844, 934, 1132, 1729
TseFI	GTSAC	1 cut(s)	556
TseI	GCWGC	4 cut(s)	110, 842, 1439, 1538
Tsp45I	GTSAC	1 cut(s)	556
TspDTI	ATGAA	7 cut(s)	875, 897, 905, 1178, 1246, 1444, 1508
TspGWI	ACGGA	2 cut(s)	555, 1790
TspRI	CASTG	6 cut(s)	84, 751, 844, 934, 1132, 1729
VpaK11BI	GGWCC	1 cut(s)	425
XapI	RAATTY	1 cut(s)	1764
XceI	RCATGY	1 cut(s)	1303
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1220
XmnI	GAANNNNTTC	1 cut(s)	1499
XspI	CTAG	7 cut(s)	153, 204, 825, 833, 924, 1313, 1413
ZrmI	AGTACT	1 cut(s)	208

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.