Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0000287

Physical Location & Seq

Genomic Coordinates Forward (+)

3836207 .. 3838331

Gene Structure 2125 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g03510.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1617 bp

ATGACGACGTTAACCGTTAAAGAAGCCGTATATTACTCTGCTCAGCTGCAACTGCCAGACTTCATGACCAAGTCAGAGAAGAAAGAGAGAGCAGAAGTTACAATTAGAGAGATGGGTTTGCAGGACGCCATGAACACAAGGATTGGAGGTTGGGGAGCTAAAGGCCTCAGTGGTGGTCAAAAGAGGAGAGTAAGCATTTGTATTGAGCTTCTCACACGCCCTAAGCTTCTCTTCCTTGACGAACCGACAAGCGGCCTTGACAGTGCAGCTTCTTATTATGTCATGAGCAGAATTGCAAATCTTGATAAAAGTGATGGAACTCCAAGGACTATTGTTACATCCATCCATCAGCCTAGCTCTGAAGTCTTTCAACTTTTTGACAGTCTTTGTCTTCTGTCTTCTGGAAGAACTGTCTATTTTGGTCCTGCTTCTGCAGCAAATCATTTTTTCACTTTAACTGGTTTCCCATGCCCAACTCTCCAAAATCCATCGGATCACTTCCTTAAGACCATAAACAAAGATTTTGAGCAGGACATTGAGCAAGGCGTAACCACACCAACAGAAGTAGCAATTGATACTCTAATAACGTCCTATAAAGAATCTGAAACCTTTCAGCAAGTTCAAAGACAAGTAGCTGAACTGTGTAAACAGGACTCTGGTGAAAAATTGGAGAAGAGAAGCCGTGCTGGCTTTCTTACACAATCTCTCGTACTTACAAGAAGATCCTACGTGAACATGCATAGAGATCGAGGCTATTACTGGTTGCGCCTGGCTATCTACATCTCCATGACCCTAGGCCTCGGTACTATCTATCATGAGCTTGGACATGGTTATAGATCTATTCAGGCAAGAGTCTTGCTGCTCACGTACATATCTAGTTTTCTAACTTTCATGGCCATTGGTGGATTCCCTTCCTTTGTGGAAGATATGAAGGTATTTGAACGAGAAAGACTGAACGGGCACTATGGTGTCTGTGCATTTGCTTTTGGCAATACATTTTCTTCTGTGCCTTTCTTGATAATGATTTCAGTGATTCCCGGGGCAATAACTTATTACCTTGCTGGACTTCATACCGGATTGGAACACTTTGTCTACTTTTCTTGTGTGTTGCTTGCTTGCATGATGTTGGTTGAGAGTCTTATGATGATAGTTGCTAGTATTGTGCCCAATTACCTCATGGGAATAATAGCTGGTGCTGGAATTCAAGGTCTTTTGATGTTATGTGGTGGATTCTTCCAATTACCAAGTGATCTTCCCACGCCGGTGTGGAAGTATCCAATGTACTACATTGCCTTCCACAAGTATGCATACCAGGGATTGTTCAAAAATGAATTCCAAGGAACAATGTTTCCAGCAAGTGAAGCCGGAGGACCATTCATCAGCGGCGAACAAATTTTGAGAGAGAGATGGCAAGTGGAAATGAGATATTCTAAGTGGGTGAATGTTGCTGTGTTGTTCGGGATGGTAGTTCTATATCGAGTTATGTTCTTGGTTATCATCAAGACAACAGAGAAGGTTAAGACTAGTACTACGGCCCTTCTGTCAATGCCTACCAAGCGAAACCTGCAAGTATTGGTTAATCCCTCATCTACGCCCGTGCATGGAGAGAACCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005319 GO:0005342 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006950 GO:0006970 GO:0007275 GO:0007389 GO:0008028 GO:0008150 GO:0008509 GO:0008514 GO:0009611 GO:0009628 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0009897 GO:0009965 GO:0009986 GO:0010016 GO:0010033 GO:0010051 GO:0010154 GO:0010222 GO:0010588 GO:0010876 GO:0015075 GO:0015245 GO:0015318 GO:0015399 GO:0015405 GO:0015711 GO:0015718 GO:0015849 GO:0015908 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0022804 GO:0022857 GO:0031224 GO:0032501 GO:0032502 GO:0033036 GO:0033993 GO:0034220 GO:0042221 GO:0042623 GO:0042626 GO:0042802 GO:0042803 GO:0043492 GO:0044425 GO:0044459 GO:0044464 GO:0046942 GO:0046943 GO:0046983 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071702 GO:0071944 GO:0080051 GO:0090698 GO:0097305 GO:0098552 GO:0098656 GO:0099402 GO:1901700 GO:1903825 GO:1905039 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

539

Amino Acids

60.43

Weight (kDa)

8.59

Isoelectric Point (pI)

42.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000287)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20410 FvH4_1g20410 FvH4_6g39250 FvH4_6g39250
malus_domestica	MD00G1036800.v1.1 MD05G1042600.v1.1 MD10G1049900.v1.1
prunus_persica	Prupe.6G191500_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064400_v2.0.a1
pyrus_communis	pycom05g03520 pycom10g03500 pycom10g03510 pycom15g28250
rosa_chinensis	RchiOBHm_Chr1g0336561 RchiOBHm_Chr2g0112551 RchiOBHm_Chr2g0112561 RchiOBHm_Chr2g0112631 RchiOBHm_Chr2g0112641 RchiOBHm_Chr2g0153091 RchiOBHm_Chr2g0153111 RchiOBHm_Chr2g0153141 RchiOBHm_Chr2g0153161 RchiOBHm_Chr2g0153171
rosa_laevigata	RLG00000017991 RLG00000017992 RLG00000017995 RLG00000017997 RLG00000020676 RLG00000020677 RLG00000020678 RLG00000020682
rosa_multiflora	Rmu_co8208234.1_g000001 Rmu_co8218328.1_g000001 Rmu_co8425243.1_g000001 Rmu_sc0000218.1_g000037 Rmu_sc0000218.1_g000044 Rmu_sc0000218.1_g000047 Rmu_sc0000218.1_g000052 Rmu_sc0001155.1_g000011 Rmu_sc0001155.1_g000026 Rmu_sc0001155.1_g000029 Rmu_sc0001499.1_g000001 Rmu_sc0001499.1_g000040 Rmu_sc0002401.1_g000032 Rmu_sc0002401.1_g000033 Rmu_sc0004070.1_g000003 Rmu_sc0004070.1_g000004 Rmu_sc0005547.1_g000001 Rmu_sc0006062.1_g000002 Rmu_sc0009780.1_g000005 Rmu_sc0013071.1_g000001 Rmu_sc0013071.1_g000012
rosa_roxburghii	Rroxscaffold_2G00095130 Rroxscaffold_2G00095140 Rroxscaffold_2G00095160 Rroxscaffold_2G00095180 Rroxscaffold_2G00095190 Rroxscaffold_2G00095200 Rroxscaffold_2G00131290 Rroxscaffold_2G00131320 Rroxscaffold_2G00131350
rosa_rugosa	Rorug02G0181500 Rorug02G0181500 Rorug02G0181600 Rorug02G0181700 Rorug02G0437300 Rorug02G0437400
rosa_samantha	Rh1DG154100 Rh2AG235200 Rh2AG235300 Rh2AG235400 Rh2AG235600 Rh2AG235800 Rh2AG499700 Rh2AG499800 Rh2AG500000 Rh2AG500100 Rh2AG500200 Rh2BG248500 Rh2BG248700 Rh2BG248800 Rh2BG511000 Rh2BG511200 Rh2BG511300 Rh2BG511600 Rh2CG239600 Rh2CG239700 Rh2CG239900 Rh2CG240000 Rh2CG485900 Rh2CG486000 Rh2CG486200 Rh2CG486300 Rh2CG486400 Rh2DG242500 Rh2DG242600 Rh2DG242700 Rh2DG242900 Rh2DG243100 Rh2DG522800 Rh2DG523100 Rh2DG523200 Rh2DG523500 Rh2DG523600 Rh5DG200200
rosa_wichuraiana	Rw2G018200 Rw2G018210 Rw2G018230 Rw2G018240 Rw2G041010 Rw2G041020 Rw2G041030 Rw2G041050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1572
AccI	GTMKAC	1 cut(s)	1092
AciI	CCGC	2 cut(s)	252, 1383
AclWI	GGATC	2 cut(s)	501, 717
AcoI	YGGCCR	1 cut(s)	894
AcsI	RAATTY	3 cut(s)	1200, 1331, 1392
AcuI	CTGAAG	1 cut(s)	381
AcyI	GRCGYC	1 cut(s)	126
AfaI	GTAC	5 cut(s)	711, 805, 869, 1283, 1528
AfiI	CCNNNNNNNGG	2 cut(s)	251, 1601
AflII	CTTAAG	1 cut(s)	503
AgsI	TTSAA	5 cut(s)	371, 623, 941, 1205, 1324
AhlI	ACTAGT	1 cut(s)	1523
AjnI	CCWGG	2 cut(s)	768, 1311
AleI	CACNNNNGTG	2 cut(s)	966, 1262
AloI	GAACNNNNNNTCC	2 cut(s)	1333, 1365
AluBI	AGCT	9 cut(s)	46, 158, 208, 226, 269, 357, 635, 820, 1190
AluI	AGCT	9 cut(s)	46, 158, 208, 226, 269, 357, 635, 820, 1190
AlwI	GGATC	2 cut(s)	501, 717
Ama87I	CYCGRG	1 cut(s)	1037
AoxI	GGCC	5 cut(s)	163, 253, 796, 894, 1533
ApeKI	GCWGC	4 cut(s)	46, 266, 434, 859
ApoI	RAATTY	3 cut(s)	1200, 1331, 1392
Asp700I	GAANNNNTTC	2 cut(s)	366, 609
AspA2I	CCTAGG	1 cut(s)	793
AspLEI	GCGC	1 cut(s)	768
AspS9I	GGNCC	3 cut(s)	422, 1370, 1534
AsuC2I	CCSGG	2 cut(s)	1038, 1039
AsuHPI	GGTGA	2 cut(s)	671, 1450
AvaI	CYCGRG	1 cut(s)	1037
AvaII	GGWCC	2 cut(s)	422, 1370
AvrII	CCTAGG	1 cut(s)	793
BaeGI	GKGCMC	2 cut(s)	963, 1167
BalI	TGGCCA	1 cut(s)	896
BbsI	GAAGAC	2 cut(s)	383, 390
BbvI	GCAGC	4 cut(s)	33, 278, 446, 846
BccI	CCATC	7 cut(s)	106, 308, 350, 354, 496, 1401, 1456
BceAI	ACGGC	3 cut(s)	11, 666, 1548
BcgI	CGANNNNNNTGC	2 cut(s)	728, 762
BciT130I	CCWGG	2 cut(s)	770, 1313
BciVI	GTATCC	1 cut(s)	1284
BcnI	CCSGG	2 cut(s)	1038, 1039
BcuI	ACTAGT	1 cut(s)	1523
BfaI	CTAG	6 cut(s)	354, 794, 876, 1155, 1524, 1615
BfmI	CTRYAG	1 cut(s)	432
BfrI	CTTAAG	1 cut(s)	503
BfuAI	ACCTGC	1 cut(s)	1572
BfuI	GTATCC	1 cut(s)	1284
BglI	GCCNNNNNGGC	1 cut(s)	687
BglII	AGATCT	1 cut(s)	836
BisI	GCNGC	6 cut(s)	47, 253, 267, 435, 860, 1384
BlnI	CCTAGG	1 cut(s)	793
BlpI	GCTNAGC	1 cut(s)	42
BlsI	GCNGC	6 cut(s)	48, 254, 268, 436, 861, 1385
BmcAI	AGTACT	1 cut(s)	1528
Bme1390I	CCNGG	4 cut(s)	770, 1038, 1039, 1313
Bme18I	GGWCC	2 cut(s)	422, 1370
BmeT110I	CYCGRG	1 cut(s)	1037
BmgT120I	GGNCC	3 cut(s)	422, 1370, 1534
BmrFI	CCNGG	4 cut(s)	770, 1038, 1039, 1313
BpiI	GAAGAC	2 cut(s)	383, 390
Bpu10I	CCTNAGC	1 cut(s)	222
Bpu1102I	GCTNAGC	1 cut(s)	42
BpuMI	CCSGG	2 cut(s)	1038, 1039
BsaAI	YACGTR	2 cut(s)	730, 867
BsaHI	GRCGYC	1 cut(s)	126
BsaJI	CCNNGG	7 cut(s)	323, 793, 799, 1037, 1038, 1312, 1336
BsaWI	WCCGGW	1 cut(s)	1073
Bsc4I	CCNNNNNNNGG	2 cut(s)	251, 1601
Bse118I	RCCGGY	1 cut(s)	1261
Bse1I	ACTGG	2 cut(s)	463, 764
Bse3DI	GCAATG	1 cut(s)	1287
BseBI	CCWGG	2 cut(s)	770, 1313
BseDI	CCNNGG	7 cut(s)	323, 793, 799, 1037, 1038, 1312, 1336
BseGI	GGATG	3 cut(s)	338, 342, 1467
BseLI	CCNNNNNNNGG	2 cut(s)	251, 1601
BseMI	GCAATG	1 cut(s)	1287
BseMII	CTCAG	2 cut(s)	56, 181
BseNI	ACTGG	2 cut(s)	463, 764
BseRI	GAGGAG	1 cut(s)	199
BseSI	GKGCMC	2 cut(s)	963, 1167
BseXI	GCAGC	4 cut(s)	33, 278, 446, 846
BsgI	GTGCAG	1 cut(s)	285
BshFI	GGCC	5 cut(s)	165, 255, 798, 896, 1535
BsiHKCI	CYCGRG	1 cut(s)	1037
BsiSI	CCGG	4 cut(s)	1038, 1074, 1262, 1365
BslI	CCNNNNNNNGG	2 cut(s)	251, 1601
BsnI	GGCC	5 cut(s)	165, 255, 798, 896, 1535
BsoBI	CYCGRG	1 cut(s)	1037
Bsp1286I	GDGCHC	2 cut(s)	963, 1167
Bsp143I	GATC	5 cut(s)	493, 722, 745, 836, 1249
Bsp1720I	GCTNAGC	1 cut(s)	42
BspACI	CCGC	2 cut(s)	252, 1383
BspANI	GGCC	5 cut(s)	165, 255, 798, 896, 1535
BspCNI	CTCAG	2 cut(s)	55, 180
BspHI	TCATGA	3 cut(s)	63, 282, 814
BspMAI	CTGCAG	1 cut(s)	436
BspMI	ACCTGC	1 cut(s)	1572
BspPI	GGATC	2 cut(s)	501, 717
BspTI	CTTAAG	1 cut(s)	503
BsrDI	GCAATG	1 cut(s)	1287
BsrFI	RCCGGY	1 cut(s)	1261
BsrI	ACTGG	2 cut(s)	463, 764
BssAI	RCCGGY	1 cut(s)	1261
BssECI	CCNNGG	7 cut(s)	323, 793, 799, 1037, 1038, 1312, 1336
BssMI	GATC	5 cut(s)	493, 722, 745, 836, 1249
BssNI	GRCGYC	1 cut(s)	126
BssT1I	CCWWGG	3 cut(s)	323, 793, 1336
Bst2UI	CCWGG	2 cut(s)	770, 1313
Bst4CI	ACNGT	5 cut(s)	16, 263, 383, 412, 642
Bst6I	CTCTTC	2 cut(s)	236, 668
BstACI	GRCGYC	1 cut(s)	126
BstAFI	CTTAAG	1 cut(s)	503
BstBAI	YACGTR	2 cut(s)	730, 867
BstC8I	GCNNGC	3 cut(s)	688, 1113, 1117
BstDEI	CTNAG	4 cut(s)	42, 167, 222, 1431
BstF5I	GGATG	3 cut(s)	338, 342, 1467
BstHHI	GCGC	1 cut(s)	768
BstKTI	GATC	5 cut(s)	496, 725, 748, 839, 1252
BstMBI	GATC	5 cut(s)	493, 722, 745, 836, 1249
BstMWI	GCNNNNNNNGC	6 cut(s)	52, 434, 687, 1361, 1555, 1564
BstNI	CCWGG	2 cut(s)	770, 1313
BstNSI	RCATGY	1 cut(s)	739
BstSCI	CCNGG	4 cut(s)	768, 1036, 1037, 1311
BstSFI	CTRYAG	1 cut(s)	432
BstSLI	GKGCMC	2 cut(s)	963, 1167
BstV1I	GCAGC	4 cut(s)	33, 278, 446, 846
BstV2I	GAAGAC	2 cut(s)	383, 390
BstX2I	RGATCY	2 cut(s)	722, 836
BstYI	RGATCY	2 cut(s)	722, 836
BsuI	GTATCC	1 cut(s)	1284
BsuRI	GGCC	5 cut(s)	165, 255, 798, 896, 1535
BtsCI	GGATG	3 cut(s)	338, 342, 1467
BtsIMutI	CAGTG	3 cut(s)	175, 268, 1035
BveI	ACCTGC	1 cut(s)	1572
Cac8I	GCNNGC	3 cut(s)	688, 1113, 1117
CciI	TCATGA	3 cut(s)	63, 282, 814
CfoI	GCGC	1 cut(s)	768
Cfr10I	RCCGGY	1 cut(s)	1261
Cfr13I	GGNCC	3 cut(s)	422, 1370, 1534
Cfr9I	CCCGGG	1 cut(s)	1037
CseI	GACGC	1 cut(s)	134
Csp6I	GTAC	5 cut(s)	710, 804, 868, 1282, 1527
CviQI	GTAC	5 cut(s)	710, 804, 868, 1282, 1527
DdeI	CTNAG	4 cut(s)	42, 167, 222, 1431
DpnI	GATC	5 cut(s)	495, 724, 747, 838, 1251
DpnII	GATC	5 cut(s)	493, 722, 745, 836, 1249
EaeI	YGGCCR	1 cut(s)	894
Eam1104I	CTCTTC	2 cut(s)	236, 668
EarI	CTCTTC	2 cut(s)	236, 668
Eco130I	CCWWGG	3 cut(s)	323, 793, 1336
Eco147I	AGGCCT	2 cut(s)	165, 798
Eco47I	GGWCC	2 cut(s)	422, 1370
Eco57I	CTGAAG	1 cut(s)	381
Eco88I	CYCGRG	1 cut(s)	1037
EcoRI	GAATTC	2 cut(s)	1200, 1331
EcoRII	CCWGG	2 cut(s)	768, 1311
EcoT14I	CCWWGG	3 cut(s)	323, 793, 1336
EcoT22I	ATGCAT	2 cut(s)	741, 1309
ErhI	CCWWGG	3 cut(s)	323, 793, 1336
FalI	AAGNNNNNCTT	2 cut(s)	215, 247
FblI	GTMKAC	1 cut(s)	1092
Fnu4HI	GCNGC	6 cut(s)	47, 253, 267, 435, 860, 1384
FokI	GGATG	3 cut(s)	325, 329, 1474
Fsp4HI	GCNGC	6 cut(s)	47, 253, 267, 435, 860, 1384
FspBI	CTAG	6 cut(s)	354, 794, 876, 1155, 1524, 1615
GlaI	GCGC	1 cut(s)	767
GluI	GCNGC	6 cut(s)	47, 253, 267, 435, 860, 1384
HaeIII	GGCC	5 cut(s)	165, 255, 798, 896, 1535
HapII	CCGG	4 cut(s)	1038, 1074, 1262, 1365
HgaI	GACGC	1 cut(s)	134
HhaI	GCGC	1 cut(s)	768
Hin1I	GRCGYC	1 cut(s)	126
Hin6I	GCGC	1 cut(s)	766
HinP1I	GCGC	1 cut(s)	766
HincII	GTYRAC	1 cut(s)	12
HindII	GTYRAC	1 cut(s)	12
HindIII	AAGCTT	1 cut(s)	224
HinfI	GANTC	7 cut(s)	599, 653, 852, 906, 1033, 1135, 1230
HpaI	GTTAAC	1 cut(s)	12
HpaII	CCGG	4 cut(s)	1038, 1074, 1262, 1365
HphI	GGTGA	2 cut(s)	671, 1450
Hpy166II	GTNNAC	4 cut(s)	12, 647, 733, 1093
Hpy188I	TCNGA	4 cut(s)	76, 361, 493, 604
Hpy188III	TCNNGA	8 cut(s)	64, 283, 302, 402, 815, 1015, 1459, 1501
Hpy8I	GTNNAC	4 cut(s)	12, 647, 733, 1093
Hpy99I	CGWCG	1 cut(s)	10
HpyAV	CCTTC	5 cut(s)	921, 925, 1303, 1507, 1547
HpyCH4III	ACNGT	5 cut(s)	16, 263, 383, 412, 642
HpyCH4IV	ACGT	4 cut(s)	8, 587, 729, 866
HpyF10VI	GCNNNNNNNGC	6 cut(s)	52, 434, 687, 1361, 1555, 1564
HpyF3I	CTNAG	4 cut(s)	42, 167, 222, 1431
HpySE526I	ACGT	4 cut(s)	8, 587, 729, 866
Hsp92I	GRCGYC	1 cut(s)	126
HspAI	GCGC	1 cut(s)	766
KspAI	GTTAAC	1 cut(s)	12
Kzo9I	GATC	5 cut(s)	493, 722, 745, 836, 1249
LmnI	GCTCC	1 cut(s)	155
Lsp1109I	GCAGC	4 cut(s)	33, 278, 446, 846
MaeI	CTAG	6 cut(s)	354, 794, 876, 1155, 1524, 1615
MaeII	ACGT	4 cut(s)	8, 587, 729, 866
MaeIII	GTNAC	3 cut(s)	97, 334, 547
MalI	GATC	5 cut(s)	495, 724, 747, 838, 1251
MboI	GATC	5 cut(s)	493, 722, 745, 836, 1249
MfeI	CAATTG	1 cut(s)	570
MflI	RGATCY	2 cut(s)	722, 836
MhlI	GDGCHC	2 cut(s)	963, 1167
MlsI	TGGCCA	1 cut(s)	896
MluCI	AATT	9 cut(s)	102, 291, 570, 665, 1168, 1200, 1238, 1331, 1392
MluNI	TGGCCA	1 cut(s)	896
MlyI	GAGTC	3 cut(s)	647, 861, 1144
MnlI	CCTC	8 cut(s)	140, 176, 177, 743, 809, 1184, 1361, 1594
Mox20I	TGGCCA	1 cut(s)	896
Mph1103I	ATGCAT	2 cut(s)	741, 1309
MroXI	GAANNNNTTC	2 cut(s)	366, 609
MscI	TGGCCA	1 cut(s)	896
MseI	TTAA	6 cut(s)	11, 18, 455, 504, 1518, 1578
MslI	CAYNNNNRTG	4 cut(s)	785, 966, 1262, 1302
Msp20I	TGGCCA	1 cut(s)	896
MspA1I	CMGCKG	2 cut(s)	46, 1383
MspCI	CTTAAG	1 cut(s)	503
MspI	CCGG	4 cut(s)	1038, 1074, 1262, 1365
MspR9I	CCNGG	4 cut(s)	770, 1038, 1039, 1313
MunI	CAATTG	1 cut(s)	570
MvaI	CCWGG	2 cut(s)	770, 1313
MwoI	GCNNNNNNNGC	6 cut(s)	52, 434, 687, 1361, 1555, 1564
NciI	CCSGG	2 cut(s)	1038, 1039
NdeII	GATC	5 cut(s)	493, 722, 745, 836, 1249
NsiI	ATGCAT	2 cut(s)	741, 1309
NspI	RCATGY	1 cut(s)	739
OliI	CACNNNNGTG	2 cut(s)	966, 1262
PagI	TCATGA	3 cut(s)	63, 282, 814
PceI	AGGCCT	2 cut(s)	165, 798
PdmI	GAANNNNTTC	2 cut(s)	366, 609
PfeI	GAWTC	4 cut(s)	599, 906, 1033, 1230
PflFI	GACNNNGTC	1 cut(s)	70
PkrI	GCNGC	6 cut(s)	48, 254, 268, 436, 861, 1385
PleI	GAGTC	3 cut(s)	647, 860, 1143
PpsI	GAGTC	3 cut(s)	647, 860, 1143
Ppu21I	YACGTR	2 cut(s)	730, 867
Psp6I	CCWGG	2 cut(s)	768, 1311
PspGI	CCWGG	2 cut(s)	768, 1311
PspPI	GGNCC	3 cut(s)	422, 1370, 1534
PstI	CTGCAG	1 cut(s)	436
PsuI	RGATCY	2 cut(s)	722, 836
PsyI	GACNNNGTC	1 cut(s)	70
PvuII	CAGCTG	1 cut(s)	46
RsaI	GTAC	5 cut(s)	711, 805, 869, 1283, 1528
RsaNI	GTAC	5 cut(s)	710, 804, 868, 1282, 1527
RseI	CAYNNNNRTG	4 cut(s)	785, 966, 1262, 1302
SaqAI	TTAA	6 cut(s)	11, 18, 455, 504, 1518, 1578
SatI	GCNGC	6 cut(s)	47, 253, 267, 435, 860, 1384
Sau3AI	GATC	5 cut(s)	493, 722, 745, 836, 1249
Sau96I	GGNCC	3 cut(s)	422, 1370, 1534
ScaI	AGTACT	1 cut(s)	1528
SchI	GAGTC	3 cut(s)	647, 861, 1144
ScrFI	CCNGG	4 cut(s)	770, 1038, 1039, 1313
SduI	GDGCHC	2 cut(s)	963, 1167
SfcI	CTRYAG	1 cut(s)	432
SgrAI	CRCCGGYG	1 cut(s)	1261
SinI	GGWCC	2 cut(s)	422, 1370
SmaI	CCCGGG	1 cut(s)	1039
SmiMI	CAYNNNNRTG	4 cut(s)	785, 966, 1262, 1302
SmlI	CTYRAG	1 cut(s)	503
SmoI	CTYRAG	1 cut(s)	503
SpeI	ACTAGT	1 cut(s)	1523
Sse9I	AATT	9 cut(s)	102, 291, 570, 665, 1168, 1200, 1238, 1331, 1392
SseBI	AGGCCT	2 cut(s)	165, 798
SsiI	CCGC	2 cut(s)	252, 1383
SspMI	CTAG	6 cut(s)	354, 794, 876, 1155, 1524, 1615
StuI	AGGCCT	2 cut(s)	165, 798
StyD4I	CCNGG	4 cut(s)	768, 1036, 1037, 1311
StyI	CCWWGG	3 cut(s)	323, 793, 1336
TaaI	ACNGT	5 cut(s)	16, 263, 383, 412, 642
TaiI	ACGT	4 cut(s)	11, 590, 732, 869
TaqI	TCGA	2 cut(s)	748, 1477
TasI	AATT	9 cut(s)	102, 291, 570, 665, 1168, 1200, 1238, 1331, 1392
TatI	WGTACW	2 cut(s)	1281, 1526
TauI	GCSGC	2 cut(s)	255, 1386
TfiI	GAWTC	4 cut(s)	599, 906, 1033, 1230
Tru1I	TTAA	6 cut(s)	11, 18, 455, 504, 1518, 1578
Tru9I	TTAA	6 cut(s)	11, 18, 455, 504, 1518, 1578
TscAI	CASTG	3 cut(s)	175, 268, 1035
TseI	GCWGC	4 cut(s)	46, 266, 434, 859
TspDTI	ATGAA	7 cut(s)	52, 146, 880, 944, 1058, 1344, 1366
TspMI	CCCGGG	1 cut(s)	1037
TspRI	CASTG	3 cut(s)	175, 268, 1035
Tth111I	GACNNNGTC	1 cut(s)	70
Vha464I	CTTAAG	1 cut(s)	503
VpaK11BI	GGWCC	2 cut(s)	422, 1370
XapI	RAATTY	3 cut(s)	1200, 1331, 1392
XceI	RCATGY	1 cut(s)	739
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1174
XmaI	CCCGGG	1 cut(s)	1037
XmaJI	CCTAGG	1 cut(s)	793
XmiI	GTMKAC	1 cut(s)	1092
XmnI	GAANNNNTTC	2 cut(s)	366, 609
XspI	CTAG	6 cut(s)	354, 794, 876, 1155, 1524, 1615
ZrmI	AGTACT	1 cut(s)	1528
Zsp2I	ATGCAT	2 cut(s)	741, 1309

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.