Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0000287

Physical Location & Seq

Genomic Coordinates Forward (+)

67481066 .. 67486531

Gene Structure 5466 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000020678

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2196 bp

ATGGCTTCAGTTAGATCTCATTCTAATGTTCAGCTTATTGATTCAATTCATGAAAAAGAATATGGTTATCATCCCAGTAATCCCACGGCAGTTGTGGAGCCCGAAATAGTTGCTAGAGGAGATGCGGTAGCGATGGAAGATTCCATTCAAAACAGAAACCATATAAAGATTCCATTAATCGAAAATAGTAAGGGTCTTTTCTTGACATGGGAAGATTTGTGGGTGAGAGTACCTTCAAATTTAAATGAGGGAAAGAATAGTAGTGATGGAAGAAGCTGCAGATCAATCCTCCGAGGGGTAACTGGTTATGCCAAACCAGGGCAGCTTTTGGCTATAATGGGTCCTTCTGGTTGTGGCAAATCTACTCTTCTTGATGCTTTAGCAGGTAGATTGAGTTCAAGCACAAGGCAAACTGGGGATATCCGTATAAATGGACATAAACAAGCACTAGCTTATGGAACTTCGGCATATGTGACACAAGATGACGCTCTAATGAAGACATTGACGGTGAAAGAAGCTATATACTACTCAGCTCAACTGCAGTTACCGAATTCAATGTCTAAGTCGATGAAGAAAGAGAGAGCACAAGTGACCATAAGAGAGATGGGTTTGCAAAATGCCATGAACACGAGGATCGGAGGTTGGGAAGCCAAGGGCCTCAGTGGTGGCGAGAAGAGAAGAGTCAGCATCTGCATTGAGCTACTTACACAACCAAAACTTCTCTTTTTGGACGAACCCACAAGCGGACTTGACAGCGCTGCGTCTTTTTATGTGATGAGCAGAATTGCAAATCTTGGTCGTAAATCGTCTCAGAGGACTATAGTTTCTTCCATCCATCAGCCTAGCTCTGAAGTCTTTCGACTCTTTGACAATCTTTGTCTTCTGTCTTCCGGTGAAACTGTATATTTTGGTCCTGCTTCTGCAGCGAATGAATTTTTCGCTGCAAGTGGTTTTCCATGCCCAACTCTCCTGTATCCATCAGATCACTTCCTCAAGACCATAAACAAAGATTTTGAGCTGGTAAGCAATTTTCTGTGGATCTTTTCTGATCCTGCTAGTGCTAACAGTACTTGTTTGACTGACGTTGAGCAAGGTATAGCCGGAAGAACACCCACAGAGGGAGCTATTCATACTCTAAAGCAGTTATTTAAAACATCTGAAAGTTATCACCAACTCCAAAGACAAATAGCTGAAATATTCAAGAAGGATTGTGAAGCATTAGAAAAGAGAAGCCCTAGATCCTTTGTGAATGCCGGCTTTGTCACACAATGTCTTGTACTCACAAGAAGATCCTTTGTGAACATGTACCGAGATCGAGGCTACTACTGGTTGCGCCTTTTCATCTACATAGCCTTAGCTGCCGGCCTTGGCACTATCTATTATAATCTTGGATACACTTATGCATCAATTCAGGCACGAGGCTCTCTACTAGCATTTGTGGCTTCATTTCTAACTTTCATGGCCATTGGTGGGTTTCCTTCCTTTGTGGAAGACATGAAGGTATTTGAACGTGAAAGACTGAATGGGCACTATGGTGTTAGTGCATTCGTCTTCGCCAACACATTTTCTTCGATGCCTTTGTTGATGTTGATTTCATTGATACCTGGAGCAATAACCTACTATCTTGCTGGACTTCACAGTGGATTTGAACACTTCTTCTACTTTGCCTCTGCACTATATGCTTGCATGATGCTGGTTGAGAGCCTAATGATGATAGTTGCGAGCATCGTGCCGAATTTCCTTATGGGCATAATAGTTGGTTCTGGATTGCAAGGGATTATGTTGTTATGCGGCGGATTCTTCCGGCGACCAAATGATCTTCCTGATCTTGTGTGGAAATACCCATTTTACCATATTGCCTTCCACAAGTATGCATTCCAGGGAATGTTTAAGAATGAATTTGAAGGAACAACGTTTCCGAATGATGATCAACTTAGAATCGGTAACTCTAAGCGGCTTAGTGGCGACAGCATTTTGAGAGATATATGGCAGGTGGAAATGGGTTACTCTAAATGGGTTGATCTTGGTGTCTTGCTAGGAATGATAGTTCTGTATCGAGCTTTGTTCTTAGTTATCATCAAGATCACTGAGAAAAGGAAGACTATTACCTTAGCTCTTCTGTCCGTGGCTCGGAAGCAGAGCATGCAAGTATTGGTGAATCCCTCCTCTACTCCATTGCATGGAGAGAGCCAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005319 GO:0005342 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006950 GO:0006970 GO:0007275 GO:0007389 GO:0008028 GO:0008150 GO:0008509 GO:0008514 GO:0009611 GO:0009628 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0009897 GO:0009965 GO:0009986 GO:0010016 GO:0010033 GO:0010051 GO:0010154 GO:0010222 GO:0010588 GO:0010876 GO:0015075 GO:0015245 GO:0015318 GO:0015399 GO:0015405 GO:0015711 GO:0015718 GO:0015849 GO:0015908 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0022804 GO:0022857 GO:0031224 GO:0032501 GO:0032502 GO:0033036 GO:0033993 GO:0034220 GO:0042221 GO:0042623 GO:0042626 GO:0042802 GO:0042803 GO:0043492 GO:0044425 GO:0044459 GO:0044464 GO:0046942 GO:0046943 GO:0046983 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071702 GO:0071944 GO:0080051 GO:0090698 GO:0097305 GO:0098552 GO:0098656 GO:0099402 GO:1901700 GO:1903825 GO:1905039 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

732

Amino Acids

81.4

Weight (kDa)

8.96

Isoelectric Point (pI)

42.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	98 - 248	1.2e-27	ABC transporter
ABC2_membrane_7	PF19055	279 - 333	3e-08	ABC-2 type transporter
ABC2_membrane	PF01061	422 - 634	1.2e-42	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0000287)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20410 FvH4_1g20410 FvH4_6g39250 FvH4_6g39250
malus_domestica	MD00G1036800.v1.1 MD05G1042600.v1.1 MD10G1049900.v1.1
prunus_persica	Prupe.6G191500_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064400_v2.0.a1
pyrus_communis	pycom05g03520 pycom10g03500 pycom10g03510 pycom15g28250
rosa_chinensis	RchiOBHm_Chr1g0336561 RchiOBHm_Chr2g0112551 RchiOBHm_Chr2g0112561 RchiOBHm_Chr2g0112631 RchiOBHm_Chr2g0112641 RchiOBHm_Chr2g0153091 RchiOBHm_Chr2g0153111 RchiOBHm_Chr2g0153141 RchiOBHm_Chr2g0153161 RchiOBHm_Chr2g0153171
rosa_laevigata	RLG00000017991 RLG00000017992 RLG00000017995 RLG00000017997 RLG00000020676 RLG00000020677 RLG00000020678 RLG00000020682
rosa_multiflora	Rmu_co8208234.1_g000001 Rmu_co8218328.1_g000001 Rmu_co8425243.1_g000001 Rmu_sc0000218.1_g000037 Rmu_sc0000218.1_g000044 Rmu_sc0000218.1_g000047 Rmu_sc0000218.1_g000052 Rmu_sc0001155.1_g000011 Rmu_sc0001155.1_g000026 Rmu_sc0001155.1_g000029 Rmu_sc0001499.1_g000001 Rmu_sc0001499.1_g000040 Rmu_sc0002401.1_g000032 Rmu_sc0002401.1_g000033 Rmu_sc0004070.1_g000003 Rmu_sc0004070.1_g000004 Rmu_sc0005547.1_g000001 Rmu_sc0006062.1_g000002 Rmu_sc0009780.1_g000005 Rmu_sc0013071.1_g000001 Rmu_sc0013071.1_g000012
rosa_roxburghii	Rroxscaffold_2G00095130 Rroxscaffold_2G00095140 Rroxscaffold_2G00095160 Rroxscaffold_2G00095180 Rroxscaffold_2G00095190 Rroxscaffold_2G00095200 Rroxscaffold_2G00131290 Rroxscaffold_2G00131320 Rroxscaffold_2G00131350
rosa_rugosa	Rorug02G0181500 Rorug02G0181500 Rorug02G0181600 Rorug02G0181700 Rorug02G0437300 Rorug02G0437400
rosa_samantha	Rh1DG154100 Rh2AG235200 Rh2AG235300 Rh2AG235400 Rh2AG235600 Rh2AG235800 Rh2AG499700 Rh2AG499800 Rh2AG500000 Rh2AG500100 Rh2AG500200 Rh2BG248500 Rh2BG248700 Rh2BG248800 Rh2BG511000 Rh2BG511200 Rh2BG511300 Rh2BG511600 Rh2CG239600 Rh2CG239700 Rh2CG239900 Rh2CG240000 Rh2CG485900 Rh2CG486000 Rh2CG486200 Rh2CG486300 Rh2CG486400 Rh2DG242500 Rh2DG242600 Rh2DG242700 Rh2DG242900 Rh2DG243100 Rh2DG522800 Rh2DG523100 Rh2DG523200 Rh2DG523500 Rh2DG523600 Rh5DG200200
rosa_wichuraiana	Rw2G018200 Rw2G018210 Rw2G018230 Rw2G018240 Rw2G041010 Rw2G041020 Rw2G041030 Rw2G041050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1383
AarI	CACCTGC	1 cut(s)	1981
Acc36I	ACCTGC	2 cut(s)	374, 1981
AccB7I	CCANNNNNTGG	1 cut(s)	2180
AciI	CCGC	5 cut(s)	125, 744, 1791, 1794, 1954
AclI	AACGTT	1 cut(s)	1913
AclWI	GGATC	5 cut(s)	641, 1043, 1046, 1233, 1284
AcoI	YGGCCR	1 cut(s)	1461
AcsI	RAATTY	5 cut(s)	238, 550, 932, 1735, 1898
AcuI	CTGAAG	1 cut(s)	870
AfaI	GTAC	4 cut(s)	231, 1069, 1278, 1307
AfeI	AGCGCT	1 cut(s)	757
AfiI	CCNNNNNNNGG	7 cut(s)	295, 318, 743, 1118, 1470, 2130, 2180
AflIII	ACRYGT	1 cut(s)	1302
AgsI	TTSAA	9 cut(s)	45, 149, 237, 399, 555, 1201, 1508, 1649, 1904
AjnI	CCWGG	3 cut(s)	316, 1603, 1878
AleI	CACNNNNGTG	1 cut(s)	1533
AloI	GAACNNNNNNTCC	4 cut(s)	1900, 1932, 2031, 2063
Alw21I	GWGCWC	1 cut(s)	586
Alw26I	GTCTC	1 cut(s)	813
AlwI	GGATC	5 cut(s)	641, 1043, 1046, 1233, 1284
AlwNI	CAGNNNCTG	1 cut(s)	690
Aor51HI	AGCGCT	1 cut(s)	757
AoxI	GGCC	3 cut(s)	655, 1363, 1461
ApeKI	GCWGC	6 cut(s)	276, 322, 758, 923, 941, 1358
ApoI	RAATTY	5 cut(s)	238, 550, 932, 1735, 1898
ArsI	GACNNNNNNTTYG	2 cut(s)	542, 574
AseI	ATTAAT	1 cut(s)	176
Asp700I	GAANNNNTTC	1 cut(s)	855
AspLEI	GCGC	2 cut(s)	758, 1335
AspS9I	GGNCC	3 cut(s)	341, 655, 911
AsuHPI	GGTGA	5 cut(s)	235, 520, 905, 1160, 2167
AvaII	GGWCC	2 cut(s)	341, 911
BaeGI	GKGCMC	1 cut(s)	1530
BalI	TGGCCA	1 cut(s)	1463
BanII	GRGCYC	1 cut(s)	102
BauI	CACGAG	2 cut(s)	628, 1416
BbsI	GAAGAC	6 cut(s)	503, 872, 879, 1497, 1543, 2105
Bbv12I	GWGCWC	1 cut(s)	586
BbvI	GCAGC	6 cut(s)	263, 334, 745, 928, 935, 1345
BccI	CCATC	6 cut(s)	127, 260, 598, 839, 843, 985
BceAI	ACGGC	1 cut(s)	102
BcgI	CGANNNNNNTGC	4 cut(s)	92, 126, 1711, 1745
BciT130I	CCWGG	3 cut(s)	318, 1605, 1880
BciVI	GTATCC	2 cut(s)	984, 1385
BclI	TGATCA	1 cut(s)	1927
BcoDI	GTCTC	1 cut(s)	813
BfaI	CTAG	7 cut(s)	114, 449, 843, 1056, 1236, 1430, 2036
BfmI	CTRYAG	4 cut(s)	277, 539, 819, 921
BfoI	RGCGCY	1 cut(s)	759
BfuAI	ACCTGC	2 cut(s)	374, 1981
BfuI	GTATCC	2 cut(s)	984, 1385
BglII	AGATCT	1 cut(s)	14
BisI	GCNGC	8 cut(s)	277, 323, 759, 924, 942, 1359, 1792, 1955
BlsI	GCNGC	8 cut(s)	278, 324, 760, 925, 943, 1360, 1793, 1956
BmcAI	AGTACT	1 cut(s)	1069
Bme1390I	CCNGG	3 cut(s)	318, 1605, 1880
Bme18I	GGWCC	2 cut(s)	341, 911
BmgT120I	GGNCC	3 cut(s)	341, 655, 911
BmiI	GGNNCC	2 cut(s)	99, 342
BmrFI	CCNGG	3 cut(s)	318, 1605, 1880
BmrI	ACTGGG	2 cut(s)	69, 423
BmsI	GCATC	7 cut(s)	112, 364, 696, 1412, 1563, 1680, 1734
BmuI	ACTGGG	2 cut(s)	69, 423
BpiI	GAAGAC	6 cut(s)	503, 872, 879, 1497, 1543, 2105
BpmI	CTGGAG	1 cut(s)	1626
Bpu10I	CCTNAGC	2 cut(s)	1354, 2110
BpuEI	CTTGAG	1 cut(s)	977
BsaJI	CCNNGG	7 cut(s)	84, 292, 317, 651, 1366, 1879, 2124
BsaWI	WCCGGW	1 cut(s)	890
BsaXI	ACNNNNNCTCC	2 cut(s)	111, 141
Bsc4I	CCNNNNNNNGG	7 cut(s)	295, 318, 743, 1118, 1470, 2130, 2180
Bse118I	RCCGGY	2 cut(s)	1253, 1361
Bse1I	ACTGG	5 cut(s)	75, 307, 418, 1331, 2191
Bse3DI	GCAATG	1 cut(s)	2174
BseBI	CCWGG	3 cut(s)	318, 1605, 1880
BseDI	CCNNGG	7 cut(s)	84, 292, 317, 651, 1366, 1879, 2124
BseGI	GGATG	2 cut(s)	70, 831
BseLI	CCNNNNNNNGG	7 cut(s)	295, 318, 743, 1118, 1470, 2130, 2180
BseMI	GCAATG	1 cut(s)	2174
BseMII	CTCAG	4 cut(s)	543, 673, 824, 2079
BseNI	ACTGG	5 cut(s)	75, 307, 418, 1331, 2191
BseRI	GAGGAG	2 cut(s)	132, 2155
BseSI	GKGCMC	1 cut(s)	1530
BseXI	GCAGC	6 cut(s)	263, 334, 745, 928, 935, 1345
BsgI	GTGCAG	1 cut(s)	1656
BshFI	GGCC	3 cut(s)	657, 1365, 1463
BsiHKAI	GWGCWC	1 cut(s)	586
BsiSI	CCGG	5 cut(s)	891, 1101, 1254, 1362, 1804
BslI	CCNNNNNNNGG	7 cut(s)	295, 318, 743, 1118, 1470, 2130, 2180
BsmAI	GTCTC	1 cut(s)	813
BsmBI	CGTCTC	1 cut(s)	813
BsmI	GAATGC	3 cut(s)	1255, 1544, 1874
BsnI	GGCC	3 cut(s)	657, 1365, 1463
Bsp1286I	GDGCHC	3 cut(s)	102, 586, 1530
BspACI	CCGC	5 cut(s)	125, 744, 1791, 1794, 1954
BspANI	GGCC	3 cut(s)	657, 1365, 1463
BspCNI	CTCAG	4 cut(s)	542, 672, 823, 2080
BspHI	TCATGA	1 cut(s)	49
BspLI	GGNNCC	2 cut(s)	99, 342
BspMAI	CTGCAG	3 cut(s)	281, 543, 925
BspMI	ACCTGC	2 cut(s)	374, 1981
BspPI	GGATC	5 cut(s)	641, 1043, 1046, 1233, 1284
BspQI	GCTCTTC	1 cut(s)	2121
BsrDI	GCAATG	1 cut(s)	2174
BsrFI	RCCGGY	2 cut(s)	1253, 1361
BsrI	ACTGG	5 cut(s)	75, 307, 418, 1331, 2191
BssAI	RCCGGY	2 cut(s)	1253, 1361
BssECI	CCNNGG	7 cut(s)	84, 292, 317, 651, 1366, 1879, 2124
BssSI	CACGAG	2 cut(s)	628, 1416
BssT1I	CCWWGG	2 cut(s)	651, 1366
Bst2BI	CACGAG	2 cut(s)	628, 1416
Bst2UI	CCWGG	3 cut(s)	318, 1605, 1880
Bst4CI	ACNGT	4 cut(s)	508, 901, 1067, 1640
Bst6I	CTCTTC	4 cut(s)	372, 668, 673, 2121
BstAPI	GCANNNNNTGC	2 cut(s)	1679, 2143
BstC8I	GCNNGC	5 cut(s)	1255, 1363, 1684, 1723, 2144
BstDSI	CCRYGG	2 cut(s)	84, 2124
BstF5I	GGATG	2 cut(s)	70, 831
BstH2I	RGCGCY	1 cut(s)	759
BstHHI	GCGC	2 cut(s)	758, 1335
BstMAI	GTCTC	1 cut(s)	813
BstMWI	GCNNNNNNNGC	5 cut(s)	923, 1358, 1439, 1679, 2143
BstNI	CCWGG	3 cut(s)	318, 1605, 1880
BstNSI	RCATGY	2 cut(s)	1306, 2146
BstSCI	CCNGG	3 cut(s)	316, 1603, 1878
BstSFI	CTRYAG	4 cut(s)	277, 539, 819, 921
BstSLI	GKGCMC	1 cut(s)	1530
BstV1I	GCAGC	6 cut(s)	263, 334, 745, 928, 935, 1345
BstV2I	GAAGAC	6 cut(s)	503, 872, 879, 1497, 1543, 2105
BstX2I	RGATCY	4 cut(s)	14, 1038, 1238, 1289
BstYI	RGATCY	4 cut(s)	14, 1038, 1238, 1289
BsuI	GTATCC	2 cut(s)	984, 1385
BsuRI	GGCC	3 cut(s)	657, 1365, 1463
BtgI	CCRYGG	2 cut(s)	84, 2124
BtgZI	GCGATG	1 cut(s)	146
BtsCI	GGATG	2 cut(s)	70, 831
BtsIMutI	CAGTG	3 cut(s)	667, 1645, 2085
BveI	ACCTGC	2 cut(s)	374, 1981
Cac8I	GCNNGC	5 cut(s)	1255, 1363, 1684, 1723, 2144
CaiI	CAGNNNCTG	1 cut(s)	690
CciI	TCATGA	1 cut(s)	49
CfoI	GCGC	2 cut(s)	758, 1335
Cfr10I	RCCGGY	2 cut(s)	1253, 1361
Cfr13I	GGNCC	3 cut(s)	341, 655, 911
CseI	GACGC	2 cut(s)	494, 750
Csp6I	GTAC	4 cut(s)	230, 1068, 1277, 1306
CspCI	CAANNNNNGTGG	2 cut(s)	73, 108
CviQI	GTAC	4 cut(s)	230, 1068, 1277, 1306
DraI	TTTAAA	2 cut(s)	243, 1150
EaeI	YGGCCR	1 cut(s)	1461
Eam1104I	CTCTTC	4 cut(s)	372, 668, 673, 2121
EarI	CTCTTC	4 cut(s)	372, 668, 673, 2121
EciI	GGCGGA	1 cut(s)	1809
Eco130I	CCWWGG	2 cut(s)	651, 1366
Eco24I	GRGCYC	1 cut(s)	102
Eco32I	GATATC	1 cut(s)	421
Eco47I	GGWCC	2 cut(s)	341, 911
Eco47III	AGCGCT	1 cut(s)	757
Eco57I	CTGAAG	1 cut(s)	870
EcoO109I	RGGNCCY	2 cut(s)	341, 655
EcoRI	GAATTC	1 cut(s)	550
EcoRII	CCWGG	3 cut(s)	316, 1603, 1878
EcoRV	GATATC	1 cut(s)	421
EcoT14I	CCWWGG	2 cut(s)	651, 1366
EcoT22I	ATGCAT	2 cut(s)	1405, 1876
EcoT38I	GRGCYC	1 cut(s)	102
ErhI	CCWWGG	2 cut(s)	651, 1366
Esp3I	CGTCTC	1 cut(s)	813
FauNDI	CATATG	1 cut(s)	469
FbaI	TGATCA	1 cut(s)	1927
Fnu4HI	GCNGC	8 cut(s)	277, 323, 759, 924, 942, 1359, 1792, 1955
FokI	GGATG	2 cut(s)	57, 818
FriOI	GRGCYC	1 cut(s)	102
Fsp4HI	GCNGC	8 cut(s)	277, 323, 759, 924, 942, 1359, 1792, 1955
FspBI	CTAG	7 cut(s)	114, 449, 843, 1056, 1236, 1430, 2036
GlaI	GCGC	2 cut(s)	757, 1334
GluI	GCNGC	8 cut(s)	277, 323, 759, 924, 942, 1359, 1792, 1955
GsuI	CTGGAG	1 cut(s)	1626
HaeII	RGCGCY	1 cut(s)	759
HaeIII	GGCC	3 cut(s)	657, 1365, 1463
HapII	CCGG	5 cut(s)	891, 1101, 1254, 1362, 1804
HgaI	GACGC	2 cut(s)	494, 750
HhaI	GCGC	2 cut(s)	758, 1335
Hin6I	GCGC	2 cut(s)	756, 1333
HinP1I	GCGC	2 cut(s)	756, 1333
HinfI	GANTC	8 cut(s)	41, 140, 169, 681, 861, 1797, 1938, 2158
HpaII	CCGG	5 cut(s)	891, 1101, 1254, 1362, 1804
HphI	GGTGA	5 cut(s)	235, 520, 905, 1160, 2167
Hpy166II	GTNNAC	1 cut(s)	1300
Hpy188I	TCNGA	9 cut(s)	293, 638, 813, 850, 982, 1048, 1159, 1920, 2133
Hpy188III	TCNNGA	8 cut(s)	50, 202, 371, 994, 1201, 1764, 1823, 2080
Hpy8I	GTNNAC	1 cut(s)	1300
HpyAV	CCTTC	7 cut(s)	243, 354, 1198, 1488, 1492, 1870, 1898
HpyCH4III	ACNGT	4 cut(s)	508, 901, 1067, 1640
HpyCH4IV	ACGT	3 cut(s)	1083, 1510, 1913
HpyF10VI	GCNNNNNNNGC	5 cut(s)	923, 1358, 1439, 1679, 2143
HpySE526I	ACGT	3 cut(s)	1083, 1510, 1913
HspAI	GCGC	2 cut(s)	756, 1333
KroI	GCCGGC	2 cut(s)	1253, 1361
KroNI	GCCGGC	2 cut(s)	1255, 1363
Ksp22I	TGATCA	1 cut(s)	1927
LguI	GCTCTTC	1 cut(s)	2121
LmnI	GCTCC	3 cut(s)	97, 1121, 1607
Lsp1109I	GCAGC	6 cut(s)	263, 334, 745, 928, 935, 1345
LweI	GCATC	7 cut(s)	112, 364, 696, 1412, 1563, 1680, 1734
MaeI	CTAG	7 cut(s)	114, 449, 843, 1056, 1236, 1430, 2036
MaeII	ACGT	3 cut(s)	1083, 1510, 1913
MaeIII	GTNAC	7 cut(s)	298, 472, 543, 589, 1261, 1943, 2003
MflI	RGATCY	4 cut(s)	14, 1038, 1238, 1289
MhlI	GDGCHC	3 cut(s)	102, 586, 1530
MlsI	TGGCCA	1 cut(s)	1463
MluCI	AATT	9 cut(s)	45, 238, 550, 783, 932, 1027, 1407, 1735, 1898
MluNI	TGGCCA	1 cut(s)	1463
MlyI	GAGTC	2 cut(s)	690, 855
Mox20I	TGGCCA	1 cut(s)	1463
Mph1103I	ATGCAT	2 cut(s)	1405, 1876
MroNI	GCCGGC	2 cut(s)	1253, 1361
MroXI	GAANNNNTTC	1 cut(s)	855
MscI	TGGCCA	1 cut(s)	1463
MseI	TTAA	4 cut(s)	176, 242, 1149, 1890
MslI	CAYNNNNRTG	3 cut(s)	24, 1533, 1869
Msp20I	TGGCCA	1 cut(s)	1463
MspI	CCGG	5 cut(s)	891, 1101, 1254, 1362, 1804
MspR9I	CCNGG	3 cut(s)	318, 1605, 1880
Mva1269I	GAATGC	3 cut(s)	1255, 1544, 1874
MvaI	CCWGG	3 cut(s)	318, 1605, 1880
MwoI	GCNNNNNNNGC	5 cut(s)	923, 1358, 1439, 1679, 2143
NaeI	GCCGGC	2 cut(s)	1255, 1363
NdeI	CATATG	1 cut(s)	469
NgoMIV	GCCGGC	2 cut(s)	1253, 1361
NlaIV	GGNNCC	2 cut(s)	99, 342
NmuCI	GTSAC	3 cut(s)	472, 589, 1261
NsiI	ATGCAT	2 cut(s)	1405, 1876
NspI	RCATGY	2 cut(s)	1306, 2146
OliI	CACNNNNGTG	1 cut(s)	1533
PaeI	GCATGC	1 cut(s)	2146
PagI	TCATGA	1 cut(s)	49
PaqCI	CACCTGC	1 cut(s)	1981
PciI	ACATGT	1 cut(s)	1302
PciSI	GCTCTTC	1 cut(s)	2121
PctI	GAATGC	3 cut(s)	1255, 1544, 1874
PdiI	GCCGGC	2 cut(s)	1255, 1363
PdmI	GAANNNNTTC	1 cut(s)	855
PfeI	GAWTC	6 cut(s)	41, 140, 169, 1797, 1938, 2158
PflMI	CCANNNNNTGG	1 cut(s)	2180
PkrI	GCNGC	8 cut(s)	278, 324, 760, 925, 943, 1360, 1793, 1956
PleI	GAGTC	2 cut(s)	689, 855
PpsI	GAGTC	2 cut(s)	689, 855
PpuMI	RGGWCCY	1 cut(s)	341
PscI	ACATGT	1 cut(s)	1302
PshBI	ATTAAT	1 cut(s)	176
PsiI	TTATAA	1 cut(s)	1383
Psp1406I	AACGTT	1 cut(s)	1913
Psp5II	RGGWCCY	1 cut(s)	341
Psp6I	CCWGG	3 cut(s)	316, 1603, 1878
PspGI	CCWGG	3 cut(s)	316, 1603, 1878
PspN4I	GGNNCC	2 cut(s)	99, 342
PspPI	GGNCC	3 cut(s)	341, 655, 911
PspPPI	RGGWCCY	1 cut(s)	341
PsrI	GAACNNNNNNTAC	2 cut(s)	379, 411
PstI	CTGCAG	3 cut(s)	281, 543, 925
PstNI	CAGNNNCTG	1 cut(s)	690
PsuI	RGATCY	4 cut(s)	14, 1038, 1238, 1289
RsaI	GTAC	4 cut(s)	231, 1069, 1278, 1307
RsaNI	GTAC	4 cut(s)	230, 1068, 1277, 1306
RseI	CAYNNNNRTG	3 cut(s)	24, 1533, 1869
SapI	GCTCTTC	1 cut(s)	2121
SaqAI	TTAA	4 cut(s)	176, 242, 1149, 1890
SatI	GCNGC	8 cut(s)	277, 323, 759, 924, 942, 1359, 1792, 1955
Sau96I	GGNCC	3 cut(s)	341, 655, 911
ScaI	AGTACT	1 cut(s)	1069
SchI	GAGTC	2 cut(s)	690, 855
ScrFI	CCNGG	3 cut(s)	318, 1605, 1880
SduI	GDGCHC	3 cut(s)	102, 586, 1530
SfaNI	GCATC	7 cut(s)	112, 364, 696, 1412, 1563, 1680, 1734
SfcI	CTRYAG	4 cut(s)	277, 539, 819, 921
SinI	GGWCC	2 cut(s)	341, 911
SmiI	ATTTAAAT	1 cut(s)	243
SmiMI	CAYNNNNRTG	3 cut(s)	24, 1533, 1869
SmlI	CTYRAG	1 cut(s)	992
SmoI	CTYRAG	1 cut(s)	992
SphI	GCATGC	1 cut(s)	2146
Sse9I	AATT	9 cut(s)	45, 238, 550, 783, 932, 1027, 1407, 1735, 1898
SsiI	CCGC	5 cut(s)	125, 744, 1791, 1794, 1954
SspI	AATATT	1 cut(s)	1197
SspMI	CTAG	7 cut(s)	114, 449, 843, 1056, 1236, 1430, 2036
StyD4I	CCNGG	3 cut(s)	316, 1603, 1878
StyI	CCWWGG	2 cut(s)	651, 1366
SwaI	ATTTAAAT	1 cut(s)	243
TaaI	ACNGT	4 cut(s)	508, 901, 1067, 1640
TaiI	ACGT	3 cut(s)	1086, 1513, 1916
TaqI	TCGA	6 cut(s)	180, 566, 859, 1315, 1571, 2056
TasI	AATT	9 cut(s)	45, 238, 550, 783, 932, 1027, 1407, 1735, 1898
TatI	WGTACW	2 cut(s)	1067, 1276
TauI	GCSGC	2 cut(s)	1794, 1957
TfiI	GAWTC	6 cut(s)	41, 140, 169, 1797, 1938, 2158
Tru1I	TTAA	4 cut(s)	176, 242, 1149, 1890
Tru9I	TTAA	4 cut(s)	176, 242, 1149, 1890
TscAI	CASTG	3 cut(s)	667, 1645, 2092
TseFI	GTSAC	3 cut(s)	472, 589, 1261
TseI	GCWGC	6 cut(s)	276, 322, 758, 923, 941, 1358
Tsp45I	GTSAC	3 cut(s)	472, 589, 1261
TspGWI	ACGGA	2 cut(s)	413, 2113
TspRI	CASTG	3 cut(s)	667, 1645, 2092
Van91I	CCANNNNNTGG	1 cut(s)	2180
VpaK11BI	GGWCC	2 cut(s)	341, 911
VspI	ATTAAT	1 cut(s)	176
XapI	RAATTY	5 cut(s)	238, 550, 932, 1735, 1898
XceI	RCATGY	2 cut(s)	1306, 2146
XcmI	CCANNNNNNNNNTGG	2 cut(s)	91, 601
XmnI	GAANNNNTTC	1 cut(s)	855
XspI	CTAG	7 cut(s)	114, 449, 843, 1056, 1236, 1430, 2036
ZrmI	AGTACT	1 cut(s)	1069
Zsp2I	ATGCAT	2 cut(s)	1405, 1876

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.