Rmu_sc0002401.1_g000033

ABC transporter G family member

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002401.1
Physical Location & Seq
Forward (+)
126146 .. 128096
1951 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002401.1_g000033.1.cds

Sequence Viewer

Length: 1167 bp
atggcagcactacctctcctctctgtctccacgatgagcacagctctcctaaaactgtttcattctctctctctctctctctctctctctctctctcttccctcggattctgaacccgacgcgtccgagcccggtgagctccacgacggaggctccggtgagtactcgatcatcgatggcgctgcaggctgtcgttatcaagtccggcacgacgaggaatcggagagagatccaccactcaccggatccttcagtgatgattatttgagcaaattggatcattattgtggtgggaccacgttcggatccggatatcgcttggtgtgctacaagatgttggacgggtgtcctatgaattatataaaggaaagatcttgtggagctctagagaagggaagccaggccaacttcataactcaatgcctagttctgacaaggagatcatttgtgaacatgtatcgcgatctaggctactactggcttcgtcttgcaatttacatttccttgtgcttatgtgtagggactatttttcatcacattggctccaattttggctcaatacaggctagaggatcgatgctcatgtttgtttcaggattcttgactttcatggcaataggtggattcccttctttcgtagaagacatgaagatctttgagcgagaaaggttaaatgggcactacagagctgccgcatttgttgttggaaacacattttcctccattccatacttactcatgatctctttaattcctggagcaatagcctattaccttgttggccttcagaagagctgtgatcacttcgcctattttgcattggttatgtttgtgtgtctgatgttggttgagagcctaatgatgattgtagcaagcattgtcccggacttcctcatggggattatcacaggtgcgggaattcaaggagtgatgatcttgaatggaggtttcttccaaaaacctgactatcttccgaagcccttctggagatacccaatgtactatattggattccacaagtattcaaatcaaggttactacaagaatgagtttataggactaacattcccctataatcaagaaggggaaggcatcattactggtgaagatatattgaaaaatatttggcaagtggagttgggctattctaagtgggttgatctataa

Protein Analysis

388

Amino Acids

43.37

Weight (kDa)

5.6

Isoelectric Point (pI)

31.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000287)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20410 FvH4_1g20410 FvH4_6g39250 FvH4_6g39250
malus_domestica MD00G1036800.v1.1 MD05G1042600.v1.1 MD10G1049900.v1.1
prunus_persica Prupe.6G191500_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064400_v2.0.a1
pyrus_communis pycom05g03520 pycom10g03500 pycom10g03510 pycom15g28250
rosa_chinensis RchiOBHm_Chr1g0336561 RchiOBHm_Chr2g0112551 RchiOBHm_Chr2g0112561 RchiOBHm_Chr2g0112631 RchiOBHm_Chr2g0112641 RchiOBHm_Chr2g0153091 RchiOBHm_Chr2g0153111 RchiOBHm_Chr2g0153141 RchiOBHm_Chr2g0153161 RchiOBHm_Chr2g0153171
rosa_laevigata RLG00000017991 RLG00000017992 RLG00000017995 RLG00000017997 RLG00000020676 RLG00000020677 RLG00000020678 RLG00000020682
rosa_multiflora Rmu_co8208234.1_g000001 Rmu_co8218328.1_g000001 Rmu_co8425243.1_g000001 Rmu_sc0000218.1_g000037 Rmu_sc0000218.1_g000044 Rmu_sc0000218.1_g000047 Rmu_sc0000218.1_g000052 Rmu_sc0001155.1_g000011 Rmu_sc0001155.1_g000026 Rmu_sc0001155.1_g000029 Rmu_sc0001499.1_g000001 Rmu_sc0001499.1_g000040 Rmu_sc0002401.1_g000032 Rmu_sc0002401.1_g000033 Rmu_sc0004070.1_g000003 Rmu_sc0004070.1_g000004 Rmu_sc0005547.1_g000001 Rmu_sc0006062.1_g000002 Rmu_sc0009780.1_g000005 Rmu_sc0013071.1_g000001 Rmu_sc0013071.1_g000012
rosa_roxburghii Rroxscaffold_2G00095130 Rroxscaffold_2G00095140 Rroxscaffold_2G00095160 Rroxscaffold_2G00095180 Rroxscaffold_2G00095190 Rroxscaffold_2G00095200 Rroxscaffold_2G00131290 Rroxscaffold_2G00131320 Rroxscaffold_2G00131350
rosa_rugosa Rorug02G0181500 Rorug02G0181500 Rorug02G0181600 Rorug02G0181700 Rorug02G0437300 Rorug02G0437400
rosa_samantha Rh1DG154100 Rh2AG235200 Rh2AG235300 Rh2AG235400 Rh2AG235600 Rh2AG235800 Rh2AG499700 Rh2AG499800 Rh2AG500000 Rh2AG500100 Rh2AG500200 Rh2BG248500 Rh2BG248700 Rh2BG248800 Rh2BG511000 Rh2BG511200 Rh2BG511300 Rh2BG511600 Rh2CG239600 Rh2CG239700 Rh2CG239900 Rh2CG240000 Rh2CG485900 Rh2CG486000 Rh2CG486200 Rh2CG486300 Rh2CG486400 Rh2DG242500 Rh2DG242600 Rh2DG242700 Rh2DG242900 Rh2DG243100 Rh2DG522800 Rh2DG523100 Rh2DG523200 Rh2DG523500 Rh2DG523600 Rh5DG200200
rosa_wichuraiana Rw2G018200 Rw2G018210 Rw2G018230 Rw2G018240 Rw2G041010 Rw2G041020 Rw2G041030 Rw2G041050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 122, 462
AccIII TCCGGA 1 cut(s) 308
AciI CCGC 2 cut(s) 693, 914
AclWI GGATC 7 cut(s) 224, 240, 253, 285, 300, 313, 580
AcsI RAATTY 1 cut(s) 918
AcuI CTGAAG 2 cut(s) 235, 770
AfaI GTAC 2 cut(s) 164, 1001
AfiI CCNNNNNNNGG 1 cut(s) 242
AflIII ACRYGT 2 cut(s) 120, 453
AgsI TTSAA 4 cut(s) 923, 940, 1026, 1117
AjnI CCWGG 2 cut(s) 399, 754
AluBI AGCT 5 cut(s) 44, 139, 383, 689, 795
AluI AGCT 5 cut(s) 44, 139, 383, 689, 795
Alw21I GWGCWC 3 cut(s) 41, 141, 385
Alw26I GTCTC 1 cut(s) 31
AlwI GGATC 7 cut(s) 224, 240, 253, 285, 300, 313, 580
Aor13HI TCCGGA 1 cut(s) 308
AoxI GGCC 2 cut(s) 402, 781
ApeKI GCWGC 3 cut(s) 5, 182, 689
ApoI RAATTY 1 cut(s) 918
Asp700I GAANNNNTTC 1 cut(s) 980
AspLEI GCGC 1 cut(s) 182
AspS9I GGNCC 1 cut(s) 294
AsuC2I CCSGG 2 cut(s) 132, 884
AsuHPI GGTGA 4 cut(s) 146, 170, 232, 1115
AvaII GGWCC 1 cut(s) 294
BaeGI GKGCMC 1 cut(s) 681
BamHI GGATCC 2 cut(s) 245, 305
BanII GRGCYC 3 cut(s) 132, 141, 385
BbsI GAAGAC 1 cut(s) 648
Bbv12I GWGCWC 3 cut(s) 41, 141, 385
BbvI GCAGC 3 cut(s) 17, 169, 676
BccI CCATC 1 cut(s) 170
BcgI CGANNNNNNTGC 2 cut(s) 164, 198
BciT130I CCWGG 2 cut(s) 401, 756
BclI TGATCA 1 cut(s) 799
BcnI CCSGG 2 cut(s) 132, 884
BcoDI GTCTC 1 cut(s) 31
BfaI CTAG 4 cut(s) 386, 425, 467, 567
BfmI CTRYAG 2 cut(s) 183, 682
BfoI RGCGCY 1 cut(s) 183
BglII AGATCT 2 cut(s) 371, 651
BisI GCNGC 4 cut(s) 6, 183, 690, 693
BlsI GCNGC 4 cut(s) 7, 184, 691, 694
BmcAI AGTACT 1 cut(s) 164
Bme1390I CCNGG 4 cut(s) 132, 401, 756, 884
Bme18I GGWCC 1 cut(s) 294
BmgT120I GGNCC 1 cut(s) 294
BmiI GGNNCC 5 cut(s) 154, 247, 295, 307, 544
BmrFI CCNGG 4 cut(s) 132, 401, 756, 884
BmsI GCATC 2 cut(s) 567, 1101
BoxI GACNNNNGTC 1 cut(s) 345
BpiI GAAGAC 1 cut(s) 648
BplI GAGNNNNNCTC 2 cut(s) 28, 60
BpmI CTGGAG 2 cut(s) 777, 1006
BpuMI CCSGG 2 cut(s) 132, 884
Bsa29I ATCGAT 2 cut(s) 174, 575
BsaJI CCNNGG 1 cut(s) 102
BsaWI WCCGGW 3 cut(s) 155, 242, 308
BsaXI ACNNNNNCTCC 5 cut(s) 30, 137, 167, 527, 557
Bsc4I CCNNNNNNNGG 1 cut(s) 242
Bse1I ACTGG 2 cut(s) 482, 1105
BseAI TCCGGA 1 cut(s) 308
BseBI CCWGG 2 cut(s) 401, 756
BseCI ATCGAT 2 cut(s) 174, 575
BseDI CCNNGG 1 cut(s) 102
BseLI CCNNNNNNNGG 1 cut(s) 242
BseNI ACTGG 2 cut(s) 482, 1105
BseRI GAGGAG 1 cut(s) 8
BseSI GKGCMC 1 cut(s) 681
BseXI GCAGC 3 cut(s) 17, 169, 676
Bsh1236I CGCG 2 cut(s) 122, 462
BshFI GGCC 2 cut(s) 404, 783
BshVI ATCGAT 2 cut(s) 174, 575
BsiHKAI GWGCWC 3 cut(s) 41, 141, 385
BsiSI CCGG 6 cut(s) 132, 156, 205, 243, 309, 884
BslFI GGGAC 3 cut(s) 307, 535, 866
BslI CCNNNNNNNGG 1 cut(s) 242
BsmAI GTCTC 1 cut(s) 31
BsmFI GGGAC 3 cut(s) 307, 535, 866
BsnI GGCC 2 cut(s) 404, 783
Bsp1286I GDGCHC 5 cut(s) 41, 132, 141, 385, 681
Bsp13I TCCGGA 1 cut(s) 308
Bsp68I TCGCGA 1 cut(s) 462
BspACI CCGC 2 cut(s) 693, 914
BspANI GGCC 2 cut(s) 404, 783
BspDI ATCGAT 2 cut(s) 174, 575
BspEI TCCGGA 1 cut(s) 308
BspFNI CGCG 2 cut(s) 122, 462
BspHI TCATGA 1 cut(s) 738
BspLI GGNNCC 5 cut(s) 154, 247, 295, 307, 544
BspMAI CTGCAG 1 cut(s) 187
BspPI GGATC 7 cut(s) 224, 240, 253, 285, 300, 313, 580
BspQI GCTCTTC 1 cut(s) 785
BsrI ACTGG 2 cut(s) 482, 1105
BssECI CCNNGG 1 cut(s) 102
Bst2UI CCWGG 2 cut(s) 401, 756
Bst4CI ACNGT 1 cut(s) 57
Bst6I CTCTTC 2 cut(s) 102, 785
BstC8I GCNNGC 2 cut(s) 187, 874
BstDEI CTNAG 1 cut(s) 1149
BstFNI CGCG 2 cut(s) 122, 462
BstH2I RGCGCY 1 cut(s) 183
BstHHI GCGC 1 cut(s) 182
BstMAI GTCTC 1 cut(s) 31
BstMWI GCNNNNNNNGC 5 cut(s) 136, 186, 324, 468, 815
BstNI CCWGG 2 cut(s) 401, 756
BstNSI RCATGY 1 cut(s) 457
BstPAI GACNNNNGTC 1 cut(s) 345
BstSCI CCNGG 4 cut(s) 130, 399, 754, 882
BstSFI CTRYAG 2 cut(s) 183, 682
BstSLI GKGCMC 1 cut(s) 681
BstUI CGCG 2 cut(s) 122, 462
BstV1I GCAGC 3 cut(s) 17, 169, 676
BstV2I GAAGAC 1 cut(s) 648
BstX2I RGATCY 5 cut(s) 229, 245, 305, 371, 651
BstYI RGATCY 5 cut(s) 229, 245, 305, 371, 651
Bsu15I ATCGAT 2 cut(s) 174, 575
BsuRI GGCC 2 cut(s) 404, 783
BsuTUI ATCGAT 2 cut(s) 174, 575
BtsIMutI CAGTG 1 cut(s) 259
BtuMI TCGCGA 1 cut(s) 462
Cac8I GCNNGC 2 cut(s) 187, 874
CciI TCATGA 1 cut(s) 738
CfoI GCGC 1 cut(s) 182
Cfr13I GGNCC 1 cut(s) 294
ClaI ATCGAT 2 cut(s) 174, 575
CseI GACGC 2 cut(s) 111, 128
Csp6I GTAC 2 cut(s) 163, 1000
CviAII CATG 6 cut(s) 454, 583, 610, 646, 739, 895
CviQI GTAC 2 cut(s) 163, 1000
DdeI CTNAG 1 cut(s) 1149
Eam1104I CTCTTC 2 cut(s) 102, 785
EarI CTCTTC 2 cut(s) 102, 785
Ecl136II GAGCTC 2 cut(s) 139, 383
Eco24I GRGCYC 3 cut(s) 132, 141, 385
Eco32I GATATC 1 cut(s) 314
Eco47I GGWCC 1 cut(s) 294
Eco53kI GAGCTC 2 cut(s) 139, 383
Eco57I CTGAAG 2 cut(s) 235, 770
EcoICRI GAGCTC 2 cut(s) 139, 383
EcoRI GAATTC 1 cut(s) 918
EcoRII CCWGG 2 cut(s) 399, 754
EcoRV GATATC 1 cut(s) 314
EcoT38I GRGCYC 3 cut(s) 132, 141, 385
FaeI CATG 6 cut(s) 457, 586, 613, 649, 742, 898
FaqI GGGAC 3 cut(s) 307, 535, 866
FatI CATG 6 cut(s) 453, 582, 609, 645, 738, 894
FauI CCCGC 1 cut(s) 907
FbaI TGATCA 1 cut(s) 799
Fnu4HI GCNGC 4 cut(s) 6, 183, 690, 693
FriOI GRGCYC 3 cut(s) 132, 141, 385
Fsp4HI GCNGC 4 cut(s) 6, 183, 690, 693
FspBI CTAG 4 cut(s) 386, 425, 467, 567
GlaI GCGC 1 cut(s) 181
GluI GCNGC 4 cut(s) 6, 183, 690, 693
GsuI CTGGAG 2 cut(s) 777, 1006
HaeII RGCGCY 1 cut(s) 183
HaeIII GGCC 2 cut(s) 404, 783
HapII CCGG 6 cut(s) 132, 156, 205, 243, 309, 884
HgaI GACGC 2 cut(s) 111, 128
HhaI GCGC 1 cut(s) 182
Hin1II CATG 6 cut(s) 457, 586, 613, 649, 742, 898
Hin6I GCGC 1 cut(s) 180
HinP1I GCGC 1 cut(s) 180
HinfI GANTC 5 cut(s) 107, 218, 597, 624, 1011
HpaII CCGG 6 cut(s) 132, 156, 205, 243, 309, 884
HphI GGTGA 4 cut(s) 146, 170, 232, 1115
Hpy166II GTNNAC 1 cut(s) 451
Hpy188I TCNGA 9 cut(s) 106, 112, 127, 223, 305, 432, 789, 840, 975
Hpy188III TCNNGA 9 cut(s) 309, 386, 461, 594, 601, 739, 937, 985, 1079
Hpy8I GTNNAC 1 cut(s) 451
Hpy99I CGWCG 3 cut(s) 122, 149, 215
HpyAV CCTTC 7 cut(s) 259, 385, 639, 794, 991, 1076, 1082
HpyCH4III ACNGT 1 cut(s) 57
HpyCH4IV ACGT 1 cut(s) 299
HpyCH4V TGCA 3 cut(s) 185, 491, 818
HpyF10VI GCNNNNNNNGC 5 cut(s) 136, 186, 324, 468, 815
HpyF3I CTNAG 1 cut(s) 1149
HpySE526I ACGT 1 cut(s) 299
Hsp92II CATG 6 cut(s) 457, 586, 613, 649, 742, 898
HspAI GCGC 1 cut(s) 180
Kpn2I TCCGGA 1 cut(s) 308
Ksp22I TGATCA 1 cut(s) 799
LguI GCTCTTC 1 cut(s) 785
LmnI GCTCC 5 cut(s) 144, 158, 380, 548, 758
Lsp1109I GCAGC 3 cut(s) 17, 169, 676
LweI GCATC 2 cut(s) 567, 1101
MaeI CTAG 4 cut(s) 386, 425, 467, 567
MaeII ACGT 1 cut(s) 299
MaeIII GTNAC 1 cut(s) 1034
MboII GAAGA 7 cut(s) 89, 653, 661, 802, 943, 962, 1118
MflI RGATCY 5 cut(s) 229, 245, 305, 371, 651
MhlI GDGCHC 5 cut(s) 41, 132, 141, 385, 681
MluCI AATT 6 cut(s) 272, 355, 492, 547, 750, 918
MluI ACGCGT 1 cut(s) 120
MmeI TCCRAC 2 cut(s) 318, 685
MnlI CCTC 9 cut(s) 24, 29, 112, 143, 208, 563, 730, 902, 938
MroI TCCGGA 1 cut(s) 308
MroXI GAANNNNTTC 1 cut(s) 980
MseI TTAA 2 cut(s) 671, 749
MslI CAYNNNNRTG 1 cut(s) 285
MspI CCGG 6 cut(s) 132, 156, 205, 243, 309, 884
MspR9I CCNGG 4 cut(s) 132, 401, 756, 884
MvaI CCWGG 2 cut(s) 401, 756
MvnI CGCG 2 cut(s) 122, 462
MwoI GCNNNNNNNGC 5 cut(s) 136, 186, 324, 468, 815
NciI CCSGG 2 cut(s) 132, 884
NlaIII CATG 6 cut(s) 457, 586, 613, 649, 742, 898
NlaIV GGNNCC 5 cut(s) 154, 247, 295, 307, 544
NruI TCGCGA 1 cut(s) 462
NspI RCATGY 1 cut(s) 457
PagI TCATGA 1 cut(s) 738
PciI ACATGT 1 cut(s) 453
PciSI GCTCTTC 1 cut(s) 785
PdmI GAANNNNTTC 1 cut(s) 980
PfeI GAWTC 5 cut(s) 107, 218, 597, 624, 1011
PfoI TCCNGGA 2 cut(s) 754, 882
PkrI GCNGC 4 cut(s) 7, 184, 691, 694
PscI ACATGT 1 cut(s) 453
PshAI GACNNNNGTC 1 cut(s) 345
Psp124BI GAGCTC 2 cut(s) 141, 385
Psp6I CCWGG 2 cut(s) 399, 754
PspGI CCWGG 2 cut(s) 399, 754
PspN4I GGNNCC 5 cut(s) 154, 247, 295, 307, 544
PspPI GGNCC 1 cut(s) 294
PstI CTGCAG 1 cut(s) 187
PsuI RGATCY 5 cut(s) 229, 245, 305, 371, 651
RruI TCGCGA 1 cut(s) 462
RsaI GTAC 2 cut(s) 164, 1001
RsaNI GTAC 2 cut(s) 163, 1000
RseI CAYNNNNRTG 1 cut(s) 285
SacI GAGCTC 2 cut(s) 141, 385
SapI GCTCTTC 1 cut(s) 785
SaqAI TTAA 2 cut(s) 671, 749
SatI GCNGC 4 cut(s) 6, 183, 690, 693
Sau96I GGNCC 1 cut(s) 294
ScaI AGTACT 1 cut(s) 164
ScrFI CCNGG 4 cut(s) 132, 401, 756, 884
SduI GDGCHC 5 cut(s) 41, 132, 141, 385, 681
SfaNI GCATC 2 cut(s) 567, 1101
SfcI CTRYAG 2 cut(s) 183, 682
SinI GGWCC 1 cut(s) 294
SmiMI CAYNNNNRTG 1 cut(s) 285
Sse9I AATT 6 cut(s) 272, 355, 492, 547, 750, 918
SsiI CCGC 2 cut(s) 693, 914
SspI AATATT 1 cut(s) 1123
SspMI CTAG 4 cut(s) 386, 425, 467, 567
SstI GAGCTC 2 cut(s) 141, 385
StyD4I CCNGG 4 cut(s) 130, 399, 754, 882
TaaI ACNGT 1 cut(s) 57
TaiI ACGT 1 cut(s) 302
TaqI TCGA 3 cut(s) 167, 174, 575
TasI AATT 6 cut(s) 272, 355, 492, 547, 750, 918
TatI WGTACW 2 cut(s) 162, 999
TauI GCSGC 1 cut(s) 695
TfiI GAWTC 5 cut(s) 107, 218, 597, 624, 1011
Tru1I TTAA 2 cut(s) 671, 749
Tru9I TTAA 2 cut(s) 671, 749
TscAI CASTG 1 cut(s) 259
TseI GCWGC 3 cut(s) 5, 182, 689
TspDTI ATGAA 6 cut(s) 50, 368, 400, 521, 598, 662
TspGWI ACGGA 1 cut(s) 162
TspRI CASTG 1 cut(s) 259
VpaK11BI GGWCC 1 cut(s) 294
XapI RAATTY 1 cut(s) 918
XbaI TCTAGA 1 cut(s) 385
XceI RCATGY 1 cut(s) 457
XmnI GAANNNNTTC 1 cut(s) 980
XspI CTAG 4 cut(s) 386, 425, 467, 567
ZrmI AGTACT 1 cut(s) 164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.