Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0000287

Physical Location & Seq

Genomic Coordinates Forward (+)

6609152 .. 6612900

Gene Structure 3749 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1049900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2058 bp

ATGGCTTCTACTTTTAATCTTAATGTCCACCACAATGCTACTGAGCATGAATATGGTTCAGCTATACTGGAGGTTGAAACACAAGTACTGCCAAGGACTGGCGGAGGAGGAGGAGGTGGCCGCGTCCAAAACAACAACCATGCAAATTTGGAGGAGGGTGTGTTTCTGACATGGGAGGACTTGTGGGTGACAGTAGTTTCCAAGAAGAACAGTATTGGTAGCAGCAGCAGATCAATCCTGCAAGGTCTAACTGGTTATGCCAAGCCTGGGGAGCTCTTGGCTATAATGGGTCCTTCTGGCTGTGGCAAGTCCACTCTCCTTGATGCTTTAGGAGGGAGATTGAGTTCAAACGCAAGGCAAACAGGGAAGATCCTAATCAATGGGCATAAACAAGCACTAGCTTATGGAACTTCGGCATATGTCACACAAGATGACACTTTAATGACGACATTAACCGTTAAAGAAGCCGTATATTACTCTGCTCAGCTGCAACTGCCAGACTTCATGACCAAGTCAGAGAAGAAAGAGAGAGCAGAAGTTACAATTAGAGAGATGGGTTTGCAGGACGCCATGAACACAAGGATTGGAGGTTGGGGAGCTAAAGGCCTTAGTGGTGGCCAAAAGAGGAGAGTAAGCATTTGTATTGAGCTTCTCACAAGCCCTAAGCTTCTCTTCCTTGACGAACCGACAAGCGGCCTTGACAGTGCAGCTTCTTATTATGTCATGAGCAGAATTGCAAATCTTGATAAAAGTGATGGAACTCCAAGGACTATTGTTACATCCATCCATCAGCCTAGCTCTGAAGTCTTTCAACTTTTTGACAGTCTTTGTCTTCTGTCTTCTGGAAGAACTGTCTATTTTGGTCCTGCTTCTGCAGCAAATCATTTTTTCACTTTAACTGGTTTCCCATGCCCAACTCTCCAAAATCCATCGGATCACTTCCTTAGGACCATAAACAAAGATTTTGAGCAGGACATTGAGCAAGGCGCAACCACACCAACAGAAGTAGCAATTGATACTCTAATAAGGTCCTATAAAGAATCTGAAACCTTTCAGCAAGTTCAAACACAAGTAGCTGAACTGTGTAAACAGGACTCTGGTGAAAAATTGGAGAAGAGAAGCCGTGCTGGCTTTCTTACACAATCTCTCGTACTCACAAGAAGATCCTTCGTGAACATGCATAGAGATCGAGGCTATTACTGGTTGCGCCTGGCTATCTACATCTCCATGACCCTAGGCCTCGGTACTATCTATCATGAGCTTGGACATGGTTATAGATCTATTCAGGCAAGAGTCTTGCTGCTCACGTACATATCTAGTTTTCTAACTTTCATGGCCATTGGTGGATTCCCTTCCTTTGTGGAAGATATGAAGGTATTTGAACGAGAAAGACTAAACGGGCACTATGGTGTCTGTGCATTTGCTTTTGGCAATACATTTTCTTCTGTGCCTTTCTTGATAATGATTTCAGTGATTCCCGGGGCAATAACTTATTACCTTGCTGGACTTCATACCGGATTGGAACACTTTGTCTACTTTTCTTGTGTGATACTTGCTTGCATGATGTTGGTTGAGAGTCTTATGATGATAGTTGCTAGTATTGTGCCCAATTACCTCATGGGAATAATAGCTGGTGCTGGAATTCAAGGTCTTTTGATGTTATGTGGTGGATTCTTCCAATTACCAAGTGATCTTCCCAAGCCTGTGTGGAAGTATCCAATGTACTACATTGCCTTCCACAAGTATGCATACCAGGGATTGTTCAAAAATGAATTCCAAGGAACAATGTTTCCAGCAAGTGAAGCCGGAGGACCATTCATCAGCGGCGAACAAATTTTGAGAGACAGATGGCAAGTGGAAATGAGATATTCTAAGTGGGTGGATGTTGCTGTGTTGTTCGGGATGATAGTTCTATATCGAGTTATGTTCTTGGTTATCCTCAAGACTACGGAGAAAGTTAAGACTAGTACTACGGCCCTTCTGTCAATGCCTACCAAGCGAAACATGCAAGTATTGGTTAATCCCTCATCCACGCCCGTGCATGGAGAGAACCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0005215 GO:0005319 GO:0005342 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006950 GO:0006970 GO:0007275 GO:0007389 GO:0008028 GO:0008150 GO:0008509 GO:0008514 GO:0009611 GO:0009628 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009737 GO:0009790 GO:0009791 GO:0009793 GO:0009897 GO:0009965 GO:0009986 GO:0010016 GO:0010033 GO:0010051 GO:0010154 GO:0010222 GO:0010588 GO:0010876 GO:0015075 GO:0015245 GO:0015318 GO:0015399 GO:0015405 GO:0015711 GO:0015718 GO:0015849 GO:0015908 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022414 GO:0022804 GO:0022857 GO:0031224 GO:0032501 GO:0032502 GO:0033036 GO:0033993 GO:0034220 GO:0042221 GO:0042623 GO:0042626 GO:0042802 GO:0042803 GO:0043492 GO:0044425 GO:0044459 GO:0044464 GO:0046942 GO:0046943 GO:0046983 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0061458 GO:0071702 GO:0071944 GO:0080051 GO:0090698 GO:0097305 GO:0098552 GO:0098656 GO:0099402 GO:1901700 GO:1903825 GO:1905039 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC2_membrane ABC_tran

Protein Analysis

686

Amino Acids

75.83

Weight (kDa)

8.21

Isoelectric Point (pI)

41.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	80 - 231	4.5e-28	ABC transporter
ABC2_membrane_7	PF19055	263 - 366	4.1e-09	ABC-2 type transporter
ABC2_membrane	PF01061	381 - 592	4.1e-38	ABC-2 type transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000287)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20390 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20400 FvH4_1g20410 FvH4_1g20410 FvH4_6g39250 FvH4_6g39250
malus_domestica	MD00G1036800.v1.1 MD05G1042600.v1.1 MD10G1049900.v1.1
prunus_persica	Prupe.6G191500_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064300_v2.0.a1 Prupe.8G064400_v2.0.a1
pyrus_communis	pycom05g03520 pycom10g03500 pycom10g03510 pycom15g28250
rosa_chinensis	RchiOBHm_Chr1g0336561 RchiOBHm_Chr2g0112551 RchiOBHm_Chr2g0112561 RchiOBHm_Chr2g0112631 RchiOBHm_Chr2g0112641 RchiOBHm_Chr2g0153091 RchiOBHm_Chr2g0153111 RchiOBHm_Chr2g0153141 RchiOBHm_Chr2g0153161 RchiOBHm_Chr2g0153171
rosa_laevigata	RLG00000017991 RLG00000017992 RLG00000017995 RLG00000017997 RLG00000020676 RLG00000020677 RLG00000020678 RLG00000020682
rosa_multiflora	Rmu_co8208234.1_g000001 Rmu_co8218328.1_g000001 Rmu_co8425243.1_g000001 Rmu_sc0000218.1_g000037 Rmu_sc0000218.1_g000044 Rmu_sc0000218.1_g000047 Rmu_sc0000218.1_g000052 Rmu_sc0001155.1_g000011 Rmu_sc0001155.1_g000026 Rmu_sc0001155.1_g000029 Rmu_sc0001499.1_g000001 Rmu_sc0001499.1_g000040 Rmu_sc0002401.1_g000032 Rmu_sc0002401.1_g000033 Rmu_sc0004070.1_g000003 Rmu_sc0004070.1_g000004 Rmu_sc0005547.1_g000001 Rmu_sc0006062.1_g000002 Rmu_sc0009780.1_g000005 Rmu_sc0013071.1_g000001 Rmu_sc0013071.1_g000012
rosa_roxburghii	Rroxscaffold_2G00095130 Rroxscaffold_2G00095140 Rroxscaffold_2G00095160 Rroxscaffold_2G00095180 Rroxscaffold_2G00095190 Rroxscaffold_2G00095200 Rroxscaffold_2G00131290 Rroxscaffold_2G00131320 Rroxscaffold_2G00131350
rosa_rugosa	Rorug02G0181500 Rorug02G0181500 Rorug02G0181600 Rorug02G0181700 Rorug02G0437300 Rorug02G0437400
rosa_samantha	Rh1DG154100 Rh2AG235200 Rh2AG235300 Rh2AG235400 Rh2AG235600 Rh2AG235800 Rh2AG499700 Rh2AG499800 Rh2AG500000 Rh2AG500100 Rh2AG500200 Rh2BG248500 Rh2BG248700 Rh2BG248800 Rh2BG511000 Rh2BG511200 Rh2BG511300 Rh2BG511600 Rh2CG239600 Rh2CG239700 Rh2CG239900 Rh2CG240000 Rh2CG485900 Rh2CG486000 Rh2CG486200 Rh2CG486300 Rh2CG486400 Rh2DG242500 Rh2DG242600 Rh2DG242700 Rh2DG242900 Rh2DG243100 Rh2DG522800 Rh2DG523100 Rh2DG523200 Rh2DG523500 Rh2DG523600 Rh5DG200200
rosa_wichuraiana	Rw2G018200 Rw2G018210 Rw2G018230 Rw2G018240 Rw2G041010 Rw2G041020 Rw2G041030 Rw2G041050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	98
AccI	GTMKAC	1 cut(s)	1533
AccII	CGCG	1 cut(s)	123
AciI	CCGC	4 cut(s)	102, 121, 693, 1824
AclWI	GGATC	3 cut(s)	364, 942, 1158
AcoI	YGGCCR	3 cut(s)	118, 616, 1335
AcsI	RAATTY	4 cut(s)	145, 1641, 1772, 1833
AcuI	CTGAAG	1 cut(s)	822
AcyI	GRCGYC	1 cut(s)	567
AfaI	GTAC	6 cut(s)	87, 1152, 1246, 1310, 1724, 1969
AfiI	CCNNNNNNNGG	4 cut(s)	98, 267, 692, 2042
AgsI	TTSAA	7 cut(s)	77, 348, 812, 1064, 1382, 1646, 1765
AhlI	ACTAGT	1 cut(s)	1964
AjnI	CCWGG	3 cut(s)	265, 1209, 1752
AleI	CACNNNNGTG	2 cut(s)	1407, 2036
AloI	GAACNNNNNNTCC	4 cut(s)	328, 360, 1774, 1806
Alw21I	GWGCWC	1 cut(s)	276
Alw26I	GTCTC	1 cut(s)	1836
AlwI	GGATC	3 cut(s)	364, 942, 1158
Ama87I	CYCGRG	1 cut(s)	1478
AoxI	GGCC	7 cut(s)	118, 604, 616, 694, 1237, 1335, 1974
ApeKI	GCWGC	6 cut(s)	222, 225, 487, 707, 875, 1300
ApoI	RAATTY	4 cut(s)	145, 1641, 1772, 1833
Asp700I	GAANNNNTTC	2 cut(s)	807, 1050
AspA2I	CCTAGG	1 cut(s)	1234
AspLEI	GCGC	2 cut(s)	989, 1209
AspS9I	GGNCC	6 cut(s)	290, 863, 948, 1029, 1811, 1975
AsuC2I	CCSGG	2 cut(s)	1479, 1480
AsuHPI	GGTGA	2 cut(s)	199, 1112
AvaI	CYCGRG	1 cut(s)	1478
AvaII	GGWCC	5 cut(s)	290, 863, 948, 1029, 1811
AvrII	CCTAGG	1 cut(s)	1234
AxyI	CCTNAGG	1 cut(s)	944
BaeGI	GKGCMC	2 cut(s)	1404, 1608
BalI	TGGCCA	2 cut(s)	618, 1337
BanII	GRGCYC	1 cut(s)	276
BbsI	GAAGAC	2 cut(s)	824, 831
Bbv12I	GWGCWC	1 cut(s)	276
BbvI	GCAGC	6 cut(s)	234, 237, 474, 719, 887, 1287
BccI	CCATC	6 cut(s)	547, 749, 791, 795, 937, 1842
BceAI	ACGGC	3 cut(s)	452, 1107, 1989
BcgI	CGANNNNNNTGC	2 cut(s)	1169, 1203
BciT130I	CCWGG	3 cut(s)	267, 1211, 1754
BciVI	GTATCC	1 cut(s)	1725
BcnI	CCSGG	2 cut(s)	1479, 1480
BcoDI	GTCTC	1 cut(s)	1836
BcuI	ACTAGT	1 cut(s)	1964
BfaI	CTAG	7 cut(s)	398, 795, 1235, 1317, 1596, 1965, 2056
BfmI	CTRYAG	1 cut(s)	873
BfuI	GTATCC	1 cut(s)	1725
BglI	GCCNNNNNGGC	1 cut(s)	1128
BglII	AGATCT	1 cut(s)	1277
BisI	GCNGC	9 cut(s)	121, 223, 226, 488, 694, 708, 876, 1301, 1825
BlnI	CCTAGG	1 cut(s)	1234
BlpI	GCTNAGC	1 cut(s)	483
BlsI	GCNGC	9 cut(s)	122, 224, 227, 489, 695, 709, 877, 1302, 1826
BmcAI	AGTACT	2 cut(s)	87, 1969
Bme1390I	CCNGG	5 cut(s)	267, 1211, 1479, 1480, 1754
Bme18I	GGWCC	5 cut(s)	290, 863, 948, 1029, 1811
BmeT110I	CYCGRG	1 cut(s)	1478
BmgT120I	GGNCC	6 cut(s)	290, 863, 948, 1029, 1811, 1975
BmiI	GGNNCC	1 cut(s)	291
BmrFI	CCNGG	5 cut(s)	267, 1211, 1479, 1480, 1754
BmsI	GCATC	1 cut(s)	313
BpiI	GAAGAC	2 cut(s)	824, 831
BpmI	CTGGAG	1 cut(s)	89
Bpu10I	CCTNAGC	1 cut(s)	663
Bpu1102I	GCTNAGC	1 cut(s)	483
BpuEI	CTTGAG	1 cut(s)	1925
BpuMI	CCSGG	2 cut(s)	1479, 1480
BsaAI	YACGTR	1 cut(s)	1308
BsaBI	GATNNNNATC	1 cut(s)	374
BsaHI	GRCGYC	1 cut(s)	567
BsaJI	CCNNGG	9 cut(s)	92, 266, 764, 1234, 1240, 1478, 1479, 1753, 1777
BsaWI	WCCGGW	1 cut(s)	1514
BsaXI	ACNNNNNCTCC	6 cut(s)	146, 167, 176, 197, 328, 358
Bsc4I	CCNNNNNNNGG	4 cut(s)	98, 267, 692, 2042
Bse1I	ACTGG	5 cut(s)	72, 103, 256, 904, 1205
Bse21I	CCTNAGG	1 cut(s)	944
Bse3DI	GCAATG	1 cut(s)	1728
Bse8I	GATNNNNATC	1 cut(s)	374
BseBI	CCWGG	3 cut(s)	267, 1211, 1754
BseDI	CCNNGG	9 cut(s)	92, 266, 764, 1234, 1240, 1478, 1479, 1753, 1777
BseGI	GGATG	5 cut(s)	779, 783, 1888, 1908, 2027
BseJI	GATNNNNATC	1 cut(s)	374
BseLI	CCNNNNNNNGG	4 cut(s)	98, 267, 692, 2042
BseMI	GCAATG	1 cut(s)	1728
BseMII	CTCAG	2 cut(s)	33, 497
BseNI	ACTGG	5 cut(s)	72, 103, 256, 904, 1205
BseRI	GAGGAG	5 cut(s)	120, 123, 126, 167, 640
BseSI	GKGCMC	2 cut(s)	1404, 1608
BseXI	GCAGC	6 cut(s)	234, 237, 474, 719, 887, 1287
BsgI	GTGCAG	1 cut(s)	726
Bsh1236I	CGCG	1 cut(s)	123
BshFI	GGCC	7 cut(s)	120, 606, 618, 696, 1239, 1337, 1976
BsiHKAI	GWGCWC	1 cut(s)	276
BsiHKCI	CYCGRG	1 cut(s)	1478
BsiSI	CCGG	3 cut(s)	1479, 1515, 1806
BslI	CCNNNNNNNGG	4 cut(s)	98, 267, 692, 2042
BsmAI	GTCTC	1 cut(s)	1836
BsnI	GGCC	7 cut(s)	120, 606, 618, 696, 1239, 1337, 1976
BsoBI	CYCGRG	1 cut(s)	1478
Bsp1286I	GDGCHC	3 cut(s)	276, 1404, 1608
Bsp143I	GATC	7 cut(s)	230, 369, 934, 1163, 1186, 1277, 1690
Bsp1720I	GCTNAGC	1 cut(s)	483
BspACI	CCGC	4 cut(s)	102, 121, 693, 1824
BspANI	GGCC	7 cut(s)	120, 606, 618, 696, 1239, 1337, 1976
BspCNI	CTCAG	2 cut(s)	34, 496
BspFNI	CGCG	1 cut(s)	123
BspHI	TCATGA	3 cut(s)	504, 723, 1255
BspLI	GGNNCC	1 cut(s)	291
BspMAI	CTGCAG	1 cut(s)	877
BspPI	GGATC	3 cut(s)	364, 942, 1158
BsrDI	GCAATG	1 cut(s)	1728
BsrI	ACTGG	5 cut(s)	72, 103, 256, 904, 1205
BssECI	CCNNGG	9 cut(s)	92, 266, 764, 1234, 1240, 1478, 1479, 1753, 1777
BssMI	GATC	7 cut(s)	230, 369, 934, 1163, 1186, 1277, 1690
BssNI	GRCGYC	1 cut(s)	567
BssT1I	CCWWGG	4 cut(s)	92, 764, 1234, 1777
Bst2UI	CCWGG	3 cut(s)	267, 1211, 1754
Bst4CI	ACNGT	7 cut(s)	193, 212, 457, 704, 824, 853, 1083
Bst6I	CTCTTC	2 cut(s)	677, 1109
BstACI	GRCGYC	1 cut(s)	567
BstBAI	YACGTR	1 cut(s)	1308
BstC8I	GCNNGC	2 cut(s)	1129, 1558
BstDEI	CTNAG	6 cut(s)	42, 483, 608, 663, 944, 1872
BstF5I	GGATG	5 cut(s)	779, 783, 1888, 1908, 2027
BstFNI	CGCG	1 cut(s)	123
BstHHI	GCGC	2 cut(s)	989, 1209
BstKTI	GATC	7 cut(s)	233, 372, 937, 1166, 1189, 1280, 1693
BstMAI	GTCTC	1 cut(s)	1836
BstMBI	GATC	7 cut(s)	230, 369, 934, 1163, 1186, 1277, 1690
BstMWI	GCNNNNNNNGC	7 cut(s)	271, 493, 875, 1128, 1802, 1996, 2005
BstNI	CCWGG	3 cut(s)	267, 1211, 1754
BstNSI	RCATGY	2 cut(s)	1180, 2008
BstSCI	CCNGG	5 cut(s)	265, 1209, 1477, 1478, 1752
BstSFI	CTRYAG	1 cut(s)	873
BstSLI	GKGCMC	2 cut(s)	1404, 1608
BstUI	CGCG	1 cut(s)	123
BstV1I	GCAGC	6 cut(s)	234, 237, 474, 719, 887, 1287
BstV2I	GAAGAC	2 cut(s)	824, 831
BstX2I	RGATCY	3 cut(s)	369, 1163, 1277
BstYI	RGATCY	3 cut(s)	369, 1163, 1277
Bsu36I	CCTNAGG	1 cut(s)	944
BsuI	GTATCC	1 cut(s)	1725
BsuRI	GGCC	7 cut(s)	120, 606, 618, 696, 1239, 1337, 1976
BtsCI	GGATG	5 cut(s)	779, 783, 1888, 1908, 2027
BtsIMutI	CAGTG	2 cut(s)	709, 1476
Cac8I	GCNNGC	2 cut(s)	1129, 1558
CciI	TCATGA	3 cut(s)	504, 723, 1255
CfoI	GCGC	2 cut(s)	989, 1209
Cfr13I	GGNCC	6 cut(s)	290, 863, 948, 1029, 1811, 1975
Cfr9I	CCCGGG	1 cut(s)	1478
CseI	GACGC	2 cut(s)	112, 575
Csp6I	GTAC	6 cut(s)	86, 1151, 1245, 1309, 1723, 1968
CspCI	CAANNNNNGTGG	2 cut(s)	301, 336
CviQI	GTAC	6 cut(s)	86, 1151, 1245, 1309, 1723, 1968
DdeI	CTNAG	6 cut(s)	42, 483, 608, 663, 944, 1872
DpnI	GATC	7 cut(s)	232, 371, 936, 1165, 1188, 1279, 1692
DpnII	GATC	7 cut(s)	230, 369, 934, 1163, 1186, 1277, 1690
EaeI	YGGCCR	3 cut(s)	118, 616, 1335
Eam1104I	CTCTTC	2 cut(s)	677, 1109
EarI	CTCTTC	2 cut(s)	677, 1109
EciI	GGCGGA	1 cut(s)	117
Ecl136II	GAGCTC	1 cut(s)	274
Eco130I	CCWWGG	4 cut(s)	92, 764, 1234, 1777
Eco147I	AGGCCT	2 cut(s)	606, 1239
Eco24I	GRGCYC	1 cut(s)	276
Eco47I	GGWCC	5 cut(s)	290, 863, 948, 1029, 1811
Eco53kI	GAGCTC	1 cut(s)	274
Eco57I	CTGAAG	1 cut(s)	822
Eco81I	CCTNAGG	1 cut(s)	944
Eco88I	CYCGRG	1 cut(s)	1478
EcoICRI	GAGCTC	1 cut(s)	274
EcoO109I	RGGNCCY	2 cut(s)	290, 1029
EcoRI	GAATTC	2 cut(s)	1641, 1772
EcoRII	CCWGG	3 cut(s)	265, 1209, 1752
EcoT14I	CCWWGG	4 cut(s)	92, 764, 1234, 1777
EcoT22I	ATGCAT	2 cut(s)	1182, 1750
EcoT38I	GRGCYC	1 cut(s)	276
ErhI	CCWWGG	4 cut(s)	92, 764, 1234, 1777
FalI	AAGNNNNNCTT	2 cut(s)	656, 688
FauNDI	CATATG	1 cut(s)	418
FblI	GTMKAC	1 cut(s)	1533
Fnu4HI	GCNGC	9 cut(s)	121, 223, 226, 488, 694, 708, 876, 1301, 1825
FokI	GGATG	5 cut(s)	766, 770, 1895, 1915, 2014
FriOI	GRGCYC	1 cut(s)	276
Fsp4HI	GCNGC	9 cut(s)	121, 223, 226, 488, 694, 708, 876, 1301, 1825
FspBI	CTAG	7 cut(s)	398, 795, 1235, 1317, 1596, 1965, 2056
GlaI	GCGC	2 cut(s)	988, 1208
GluI	GCNGC	9 cut(s)	121, 223, 226, 488, 694, 708, 876, 1301, 1825
GsuI	CTGGAG	1 cut(s)	89
HaeIII	GGCC	7 cut(s)	120, 606, 618, 696, 1239, 1337, 1976
HapII	CCGG	3 cut(s)	1479, 1515, 1806
HgaI	GACGC	2 cut(s)	112, 575
HhaI	GCGC	2 cut(s)	989, 1209
Hin1I	GRCGYC	1 cut(s)	567
Hin6I	GCGC	2 cut(s)	987, 1207
HinP1I	GCGC	2 cut(s)	987, 1207
HindIII	AAGCTT	1 cut(s)	665
HinfI	GANTC	7 cut(s)	1040, 1094, 1293, 1347, 1474, 1576, 1671
HpaII	CCGG	3 cut(s)	1479, 1515, 1806
HphI	GGTGA	2 cut(s)	199, 1112
Hpy166II	GTNNAC	5 cut(s)	28, 312, 1088, 1174, 1534
Hpy188I	TCNGA	5 cut(s)	168, 517, 802, 934, 1045
Hpy188III	TCNNGA	9 cut(s)	505, 724, 743, 843, 1171, 1256, 1456, 1900, 1942
Hpy8I	GTNNAC	5 cut(s)	28, 312, 1088, 1174, 1534
HpyAV	CCTTC	6 cut(s)	303, 1177, 1362, 1366, 1744, 1988
HpyCH4III	ACNGT	7 cut(s)	193, 212, 457, 704, 824, 853, 1083
HpyCH4IV	ACGT	1 cut(s)	1307
HpyF10VI	GCNNNNNNNGC	7 cut(s)	271, 493, 875, 1128, 1802, 1996, 2005
HpyF3I	CTNAG	6 cut(s)	42, 483, 608, 663, 944, 1872
HpySE526I	ACGT	1 cut(s)	1307
Hsp92I	GRCGYC	1 cut(s)	567
HspAI	GCGC	2 cut(s)	987, 1207
Kzo9I	GATC	7 cut(s)	230, 369, 934, 1163, 1186, 1277, 1690
LmnI	GCTCC	2 cut(s)	271, 596
Lsp1109I	GCAGC	6 cut(s)	234, 237, 474, 719, 887, 1287
LweI	GCATC	1 cut(s)	313
MaeI	CTAG	7 cut(s)	398, 795, 1235, 1317, 1596, 1965, 2056
MaeII	ACGT	1 cut(s)	1307
MaeIII	GTNAC	4 cut(s)	187, 421, 538, 775
MalI	GATC	7 cut(s)	232, 371, 936, 1165, 1188, 1279, 1692
MboI	GATC	7 cut(s)	230, 369, 934, 1163, 1186, 1277, 1690
MfeI	CAATTG	1 cut(s)	1011
MflI	RGATCY	3 cut(s)	369, 1163, 1277
MhlI	GDGCHC	3 cut(s)	276, 1404, 1608
MlsI	TGGCCA	2 cut(s)	618, 1337
MluNI	TGGCCA	2 cut(s)	618, 1337
MlyI	GAGTC	3 cut(s)	1088, 1302, 1585
Mox20I	TGGCCA	2 cut(s)	618, 1337
Mph1103I	ATGCAT	2 cut(s)	1182, 1750
MroXI	GAANNNNTTC	2 cut(s)	807, 1050
MscI	TGGCCA	2 cut(s)	618, 1337
MseI	TTAA	8 cut(s)	15, 21, 440, 452, 459, 896, 1959, 2019
MslI	CAYNNNNRTG	7 cut(s)	33, 51, 440, 1226, 1407, 1743, 2036
Msp20I	TGGCCA	2 cut(s)	618, 1337
MspA1I	CMGCKG	2 cut(s)	487, 1824
MspI	CCGG	3 cut(s)	1479, 1515, 1806
MspR9I	CCNGG	5 cut(s)	267, 1211, 1479, 1480, 1754
MunI	CAATTG	1 cut(s)	1011
MvaI	CCWGG	3 cut(s)	267, 1211, 1754
MvnI	CGCG	1 cut(s)	123
MwoI	GCNNNNNNNGC	7 cut(s)	271, 493, 875, 1128, 1802, 1996, 2005
NciI	CCSGG	2 cut(s)	1479, 1480
NdeI	CATATG	1 cut(s)	418
NdeII	GATC	7 cut(s)	230, 369, 934, 1163, 1186, 1277, 1690
NlaIV	GGNNCC	1 cut(s)	291
NmuCI	GTSAC	2 cut(s)	187, 421
NsiI	ATGCAT	2 cut(s)	1182, 1750
NspI	RCATGY	2 cut(s)	1180, 2008
OliI	CACNNNNGTG	2 cut(s)	1407, 2036
PagI	TCATGA	3 cut(s)	504, 723, 1255
PceI	AGGCCT	2 cut(s)	606, 1239
PdmI	GAANNNNTTC	2 cut(s)	807, 1050
PfeI	GAWTC	4 cut(s)	1040, 1347, 1474, 1671
PflFI	GACNNNGTC	1 cut(s)	511
PflMI	CCANNNNNTGG	1 cut(s)	98
PkrI	GCNGC	9 cut(s)	122, 224, 227, 489, 695, 709, 877, 1302, 1826
PleI	GAGTC	3 cut(s)	1088, 1301, 1584
PpsI	GAGTC	3 cut(s)	1088, 1301, 1584
Ppu21I	YACGTR	1 cut(s)	1308
PpuMI	RGGWCCY	2 cut(s)	290, 1029
Psp124BI	GAGCTC	1 cut(s)	276
Psp5II	RGGWCCY	2 cut(s)	290, 1029
Psp6I	CCWGG	3 cut(s)	265, 1209, 1752
PspGI	CCWGG	3 cut(s)	265, 1209, 1752
PspN4I	GGNNCC	1 cut(s)	291
PspPI	GGNCC	6 cut(s)	290, 863, 948, 1029, 1811, 1975
PspPPI	RGGWCCY	2 cut(s)	290, 1029
PstI	CTGCAG	1 cut(s)	877
PsuI	RGATCY	3 cut(s)	369, 1163, 1277
PsyI	GACNNNGTC	1 cut(s)	511
PvuII	CAGCTG	1 cut(s)	487
RsaI	GTAC	6 cut(s)	87, 1152, 1246, 1310, 1724, 1969
RsaNI	GTAC	6 cut(s)	86, 1151, 1245, 1309, 1723, 1968
RseI	CAYNNNNRTG	7 cut(s)	33, 51, 440, 1226, 1407, 1743, 2036
SacI	GAGCTC	1 cut(s)	276
SaqAI	TTAA	8 cut(s)	15, 21, 440, 452, 459, 896, 1959, 2019
SatI	GCNGC	9 cut(s)	121, 223, 226, 488, 694, 708, 876, 1301, 1825
Sau3AI	GATC	7 cut(s)	230, 369, 934, 1163, 1186, 1277, 1690
Sau96I	GGNCC	6 cut(s)	290, 863, 948, 1029, 1811, 1975
ScaI	AGTACT	2 cut(s)	87, 1969
SchI	GAGTC	3 cut(s)	1088, 1302, 1585
ScrFI	CCNGG	5 cut(s)	267, 1211, 1479, 1480, 1754
SduI	GDGCHC	3 cut(s)	276, 1404, 1608
SfaNI	GCATC	1 cut(s)	313
SfcI	CTRYAG	1 cut(s)	873
SinI	GGWCC	5 cut(s)	290, 863, 948, 1029, 1811
SmaI	CCCGGG	1 cut(s)	1480
SmiMI	CAYNNNNRTG	7 cut(s)	33, 51, 440, 1226, 1407, 1743, 2036
SmlI	CTYRAG	1 cut(s)	1940
SmoI	CTYRAG	1 cut(s)	1940
SpeI	ACTAGT	1 cut(s)	1964
SseBI	AGGCCT	2 cut(s)	606, 1239
SsiI	CCGC	4 cut(s)	102, 121, 693, 1824
SspMI	CTAG	7 cut(s)	398, 795, 1235, 1317, 1596, 1965, 2056
SstI	GAGCTC	1 cut(s)	276
StuI	AGGCCT	2 cut(s)	606, 1239
StyD4I	CCNGG	5 cut(s)	265, 1209, 1477, 1478, 1752
StyI	CCWWGG	4 cut(s)	92, 764, 1234, 1777
TaaI	ACNGT	7 cut(s)	193, 212, 457, 704, 824, 853, 1083
TaiI	ACGT	1 cut(s)	1310
TaqI	TCGA	2 cut(s)	1189, 1918
TatI	WGTACW	3 cut(s)	85, 1722, 1967
TauI	GCSGC	3 cut(s)	123, 696, 1827
TfiI	GAWTC	4 cut(s)	1040, 1347, 1474, 1671
Tru1I	TTAA	8 cut(s)	15, 21, 440, 452, 459, 896, 1959, 2019
Tru9I	TTAA	8 cut(s)	15, 21, 440, 452, 459, 896, 1959, 2019
TscAI	CASTG	2 cut(s)	709, 1476
TseFI	GTSAC	2 cut(s)	187, 421
TseI	GCWGC	6 cut(s)	222, 225, 487, 707, 875, 1300
Tsp45I	GTSAC	2 cut(s)	187, 421
TspDTI	ATGAA	8 cut(s)	63, 493, 587, 1321, 1385, 1499, 1785, 1807
TspGWI	ACGGA	1 cut(s)	1964
TspMI	CCCGGG	1 cut(s)	1478
TspRI	CASTG	2 cut(s)	709, 1476
Tth111I	GACNNNGTC	1 cut(s)	511
Van91I	CCANNNNNTGG	1 cut(s)	98
VpaK11BI	GGWCC	5 cut(s)	290, 863, 948, 1029, 1811
XapI	RAATTY	4 cut(s)	145, 1641, 1772, 1833
XceI	RCATGY	2 cut(s)	1180, 2008
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1615
XmaI	CCCGGG	1 cut(s)	1478
XmaJI	CCTAGG	1 cut(s)	1234
XmiI	GTMKAC	1 cut(s)	1533
XmnI	GAANNNNTTC	2 cut(s)	807, 1050
XspI	CTAG	7 cut(s)	398, 795, 1235, 1317, 1596, 1965, 2056
ZrmI	AGTACT	2 cut(s)	87, 1969
Zsp2I	ATGCAT	2 cut(s)	1182, 1750

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.