FvH4_2g11011

calcium-binding protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
9657714 .. 9658779
1066 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g11011.t1

Sequence Viewer

Length: 408 bp
ATGGGAAGTGAGGAGGTGGTAAAGATGATTGAAGGGCTCCTCCTCCCTTCTCCTCGAAGTCAGGTGCAGATTAAGAGGTTGGAAGCTGAATGTAGGGTCATAGCTGCTACTGCTTGTGAGCTTATTTCATTGAAGAGATTGCTATCTGATTTGGGATCCCCTTGTAGTCAACCAATATCTCTCTATTGTGTTCACATTACTTATAATCCTGTTTTTCATGAAAGGACTAAGCATATTGAAGTTGATTACCACTATATTCAAGCTCAAGTTCAGTTCAAAATCATCACCACTCATAACACTTGCAGTCATGATCAGCTAGTTGATATCTTCACCAAGTTTCTTTCAATGGACAATTTTCATCATATCTTGGGCAAGCTTGGCTCAATGAATCCCCTTGATCCAGCTTGA
Functional Annotation

Protein Analysis

136

Amino Acids

15.3

Weight (kDa)

6.42

Isoelectric Point (pI)

58.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 204
AclWI GGATC 3 cut(s) 150, 163, 392
AgsI TTSAA 6 cut(s) 32, 133, 239, 260, 277, 345
AluBI AGCT 7 cut(s) 86, 104, 121, 263, 316, 376, 404
AluI AGCT 7 cut(s) 86, 104, 121, 263, 316, 376, 404
AlwI GGATC 3 cut(s) 150, 163, 392
ApeKI GCWGC 1 cut(s) 104
AsuHPI GGTGA 2 cut(s) 277, 322
BamHI GGATCC 1 cut(s) 155
BanII GRGCYC 1 cut(s) 39
BbvI GCAGC 1 cut(s) 91
BclI TGATCA 1 cut(s) 310
BfaI CTAG 1 cut(s) 317
BisI GCNGC 1 cut(s) 105
BlsI GCNGC 1 cut(s) 106
BmiI GGNNCC 2 cut(s) 38, 157
BpuEI CTTGAG 1 cut(s) 249
BsaBI GATNNNNATC 1 cut(s) 142
Bse8I GATNNNNATC 1 cut(s) 142
BseJI GATNNNNATC 1 cut(s) 142
BseRI GAGGAG 4 cut(s) 26, 29, 32, 42
BseXI GCAGC 1 cut(s) 91
BsgI GTGCAG 1 cut(s) 86
Bsp1286I GDGCHC 1 cut(s) 39
Bsp143I GATC 3 cut(s) 155, 310, 397
BspHI TCATGA 2 cut(s) 217, 307
BspLI GGNNCC 2 cut(s) 38, 157
BspPI GGATC 3 cut(s) 150, 163, 392
BssMI GATC 3 cut(s) 155, 310, 397
Bst6I CTCTTC 1 cut(s) 128
BstC8I GCNNGC 1 cut(s) 374
BstDEI CTNAG 1 cut(s) 228
BstKTI GATC 3 cut(s) 158, 313, 400
BstMBI GATC 3 cut(s) 155, 310, 397
BstMWI GCNNNNNNNGC 2 cut(s) 110, 378
BstV1I GCAGC 1 cut(s) 91
BstX2I RGATCY 1 cut(s) 155
BstYI RGATCY 1 cut(s) 155
Cac8I GCNNGC 1 cut(s) 374
CciI TCATGA 2 cut(s) 217, 307
CviAII CATG 2 cut(s) 218, 308
CviJI RGCY 9 cut(s) 37, 86, 104, 121, 263, 316, 376, 381, 404
CviKI_1 RGCY 9 cut(s) 37, 86, 104, 121, 263, 316, 376, 381, 404
DdeI CTNAG 1 cut(s) 228
DpnI GATC 3 cut(s) 157, 312, 399
DpnII GATC 3 cut(s) 155, 310, 397
Eam1104I CTCTTC 1 cut(s) 128
EarI CTCTTC 1 cut(s) 128
Eco24I GRGCYC 1 cut(s) 39
Eco32I GATATC 1 cut(s) 325
EcoRV GATATC 1 cut(s) 325
EcoT38I GRGCYC 1 cut(s) 39
FaeI CATG 2 cut(s) 221, 311
FaiI YATR 8 cut(s) 101, 204, 219, 234, 255, 294, 309, 363
FatI CATG 2 cut(s) 217, 307
FbaI TGATCA 1 cut(s) 310
Fnu4HI GCNGC 1 cut(s) 105
FriOI GRGCYC 1 cut(s) 39
Fsp4HI GCNGC 1 cut(s) 105
FspBI CTAG 1 cut(s) 317
GluI GCNGC 1 cut(s) 105
Hin1II CATG 2 cut(s) 221, 311
HincII GTYRAC 1 cut(s) 170
HindII GTYRAC 1 cut(s) 170
HindIII AAGCTT 1 cut(s) 374
HinfI GANTC 1 cut(s) 388
HphI GGTGA 2 cut(s) 277, 322
Hpy166II GTNNAC 2 cut(s) 170, 193
Hpy188I TCNGA 1 cut(s) 148
Hpy188III TCNNGA 2 cut(s) 218, 308
Hpy8I GTNNAC 2 cut(s) 170, 193
HpyAV CCTTC 2 cut(s) 26, 57
HpyCH4V TGCA 2 cut(s) 67, 303
HpyF10VI GCNNNNNNNGC 2 cut(s) 110, 378
HpyF3I CTNAG 1 cut(s) 228
Hsp92II CATG 2 cut(s) 221, 311
Ksp22I TGATCA 1 cut(s) 310
Kzo9I GATC 3 cut(s) 155, 310, 397
LmnI GCTCC 1 cut(s) 42
LpnPI CCDG 2 cut(s) 47, 222
Lsp1109I GCAGC 1 cut(s) 91
MaeI CTAG 1 cut(s) 317
MalI GATC 3 cut(s) 157, 312, 399
MboI GATC 3 cut(s) 155, 310, 397
MboII GAAGA 2 cut(s) 145, 319
MflI RGATCY 1 cut(s) 155
MhlI GDGCHC 1 cut(s) 39
MluCI AATT 1 cut(s) 352
MmeI TCCRAC 1 cut(s) 60
MnlI CCTC 6 cut(s) 4, 7, 50, 53, 63, 69
MseI TTAA 1 cut(s) 72
MwoI GCNNNNNNNGC 2 cut(s) 110, 378
NdeII GATC 3 cut(s) 155, 310, 397
NlaIII CATG 2 cut(s) 221, 311
NlaIV GGNNCC 2 cut(s) 38, 157
PagI TCATGA 2 cut(s) 217, 307
PfeI GAWTC 1 cut(s) 388
PkrI GCNGC 1 cut(s) 106
PsiI TTATAA 1 cut(s) 204
PspN4I GGNNCC 2 cut(s) 38, 157
PsuI RGATCY 1 cut(s) 155
SaqAI TTAA 1 cut(s) 72
SatI GCNGC 1 cut(s) 105
Sau3AI GATC 3 cut(s) 155, 310, 397
SduI GDGCHC 1 cut(s) 39
SmlI CTYRAG 1 cut(s) 264
SmoI CTYRAG 1 cut(s) 264
Sse9I AATT 1 cut(s) 352
SspMI CTAG 1 cut(s) 317
TaqI TCGA 1 cut(s) 55
TasI AATT 1 cut(s) 352
TfiI GAWTC 1 cut(s) 388
Tru1I TTAA 1 cut(s) 72
Tru9I TTAA 1 cut(s) 72
TseI GCWGC 1 cut(s) 104
TspDTI ATGAA 5 cut(s) 117, 206, 234, 347, 401
XspI CTAG 1 cut(s) 317
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.