Mitochondrial protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| FPL | PF09758 | 42 - 174 | 3e-40 | Uncharacterised conserved protein |
| Retrotran_gag_2 | PF14223 | 565 - 712 | 1.4e-15 | gag-polypeptide of LTR copia-type |
| gag_pre-integrs | PF13976 | 952 - 1022 | 4.4e-11 | GAG-pre-integrase domain |
| rve | PF00665 | 1035 - 1135 | 1.1e-12 | Integrase core domain |
| SH3_retrovirus | PF25597 | 1209 - 1268 | 2.9e-22 | Retroviral polymerase SH3-like domain |
| RVT_2 | PF07727 | 1430 - 1671 | 1.5e-69 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 74 |
| AarI | CACCTGC | 1 cut(s) | 4102 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 2168, 5028 |
| Acc16I | TGCGCA | 1 cut(s) | 899 |
| Acc36I | ACCTGC | 1 cut(s) | 4102 |
| AccB1I | GGYRCC | 5 cut(s) | 1990, 2014, 4660, 4985, 5084 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 977 |
| AccI | GTMKAC | 2 cut(s) | 1429, 3447 |
| AccII | CGCG | 8 cut(s) | 1724, 2193, 2232, 2331, 2364, 2661, 3883, 4727 |
| AccIII | TCCGGA | 1 cut(s) | 2788 |
| AcoI | YGGCCR | 4 cut(s) | 994, 2212, 2251, 4254 |
| AcuI | CTGAAG | 6 cut(s) | 242, 1356, 1829, 3258, 5018, 5415 |
| AcvI | CACGTG | 1 cut(s) | 2264 |
| AcyI | GRCGYC | 2 cut(s) | 4661, 5085 |
| AdeI | CACNNNGTG | 1 cut(s) | 1117 |
| AflII | CTTAAG | 3 cut(s) | 409, 1439, 4148 |
| AflIII | ACRYGT | 3 cut(s) | 321, 1089, 3132 |
| AgeI | ACCGGT | 3 cut(s) | 3910, 4190, 4879 |
| AhlI | ACTAGT | 1 cut(s) | 3335 |
| AjiI | CACGTC | 4 cut(s) | 870, 1081, 2561, 3133 |
| AjnI | CCWGG | 8 cut(s) | 23, 588, 1036, 1788, 2178, 3981, 4127, 5242 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1863, 1895, 3162, 3194 |
| Alw21I | GWGCWC | 3 cut(s) | 51, 2506, 2518 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 977 |
| Ama87I | CYCGRG | 2 cut(s) | 655, 1491 |
| Aor13HI | TCCGGA | 1 cut(s) | 2788 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 5108, 5140 |
| AseI | ATTAAT | 1 cut(s) | 686 |
| AsiGI | ACCGGT | 3 cut(s) | 3910, 4190, 4879 |
| AspLEI | GCGC | 5 cut(s) | 124, 900, 4063, 4663, 5087 |
| AsuC2I | CCSGG | 9 cut(s) | 656, 657, 1987, 2611, 4425, 4807, 5287, 5314, 5534 |
| AsuII | TTCGAA | 1 cut(s) | 2993 |
| AsuNHI | GCTAGC | 1 cut(s) | 1484 |
| AvaI | CYCGRG | 2 cut(s) | 655, 1491 |
| AvaII | GGWCC | 9 cut(s) | 484, 1747, 2438, 4131, 4193, 4870, 4877, 4909, 5385 |
| AxyI | CCTNAGG | 1 cut(s) | 3055 |
| BaeGI | GKGCMC | 4 cut(s) | 565, 1993, 3889, 4104 |
| BalI | TGGCCA | 1 cut(s) | 996 |
| BamHI | GGATCC | 2 cut(s) | 5056, 5290 |
| BanI | GGYRCC | 5 cut(s) | 1990, 2014, 4660, 4985, 5084 |
| BanII | GRGCYC | 2 cut(s) | 51, 4653 |
| BauI | CACGAG | 2 cut(s) | 2208, 4587 |
| BbrPI | CACGTG | 1 cut(s) | 2264 |
| BbsI | GAAGAC | 1 cut(s) | 5024 |
| Bbv12I | GWGCWC | 3 cut(s) | 51, 2506, 2518 |
| BbvCI | CCTCAGC | 2 cut(s) | 2385, 3501 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 594, 628, 2983, 3017, 4568, 4602 |
| BciT130I | CCWGG | 8 cut(s) | 25, 590, 1038, 1790, 2180, 3983, 4129, 5244 |
| BclI | TGATCA | 3 cut(s) | 64, 1783, 5635 |
| BcnI | CCSGG | 9 cut(s) | 656, 657, 1987, 2611, 4425, 4807, 5287, 5314, 5534 |
| BcuI | ACTAGT | 1 cut(s) | 3335 |
| BfaI | CTAG | 5 cut(s) | 1274, 1485, 2985, 3336, 3900 |
| BfmI | CTRYAG | 3 cut(s) | 266, 747, 1244 |
| BfoI | RGCGCY | 3 cut(s) | 125, 4664, 5088 |
| BfrI | CTTAAG | 3 cut(s) | 409, 1439, 4148 |
| BfuAI | ACCTGC | 1 cut(s) | 4102 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 500, 3497 |
| BlpI | GCTNAGC | 1 cut(s) | 2580 |
| BmcAI | AGTACT | 1 cut(s) | 3552 |
| Bme18I | GGWCC | 9 cut(s) | 484, 1747, 2438, 4131, 4193, 4870, 4877, 4909, 5385 |
| BmeT110I | CYCGRG | 2 cut(s) | 655, 1491 |
| BmgBI | CACGTC | 4 cut(s) | 870, 1081, 2561, 3133 |
| BmrI | ACTGGG | 4 cut(s) | 1109, 1744, 3505, 3879 |
| BmtI | GCTAGC | 1 cut(s) | 1488 |
| BmuI | ACTGGG | 4 cut(s) | 1109, 1744, 3505, 3879 |
| BpiI | GAAGAC | 1 cut(s) | 5024 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 4061, 4093 |
| BpmI | CTGGAG | 7 cut(s) | 954, 999, 1892, 2149, 3965, 4050, 5450 |
| Bpu10I | CCTNAGC | 4 cut(s) | 50, 2070, 2385, 3501 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2580 |
| Bpu14I | TTCGAA | 1 cut(s) | 2993 |
| BpuEI | CTTGAG | 3 cut(s) | 2126, 3134, 4637 |
| BpuMI | CCSGG | 9 cut(s) | 656, 657, 1987, 2611, 4425, 4807, 5287, 5314, 5534 |
| BsaAI | YACGTR | 2 cut(s) | 221, 2264 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1565 |
| BsaHI | GRCGYC | 2 cut(s) | 4661, 5085 |
| BsaI | GGTCTC | 4 cut(s) | 150, 2298, 4931, 5383 |
| BsaWI | WCCGGW | 4 cut(s) | 2788, 3910, 4190, 4879 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 201, 231, 2444, 2474, 3091, 3121 |
| Bse118I | RCCGGY | 7 cut(s) | 1694, 2017, 3910, 3973, 4190, 4879, 4993 |
| Bse1I | ACTGG | 9 cut(s) | 558, 1115, 1219, 1236, 1739, 3457, 3500, 3874, 5467 |
| Bse21I | CCTNAGG | 1 cut(s) | 3055 |
| Bse3DI | GCAATG | 1 cut(s) | 2854 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1565 |
| BseAI | TCCGGA | 1 cut(s) | 2788 |
| BseBI | CCWGG | 8 cut(s) | 25, 590, 1038, 1790, 2180, 3983, 4129, 5244 |
| BseJI | GATNNNNATC | 1 cut(s) | 1565 |
| BseMI | GCAATG | 1 cut(s) | 2854 |
| BseNI | ACTGG | 9 cut(s) | 558, 1115, 1219, 1236, 1739, 3457, 3500, 3874, 5467 |
| BseRI | GAGGAG | 6 cut(s) | 488, 2722, 3099, 3837, 3840, 4580 |
| BseSI | GKGCMC | 4 cut(s) | 565, 1993, 3889, 4104 |
| BseYI | CCCAGC | 1 cut(s) | 2589 |
| BsgI | GTGCAG | 1 cut(s) | 681 |
| Bsh1236I | CGCG | 8 cut(s) | 1724, 2193, 2232, 2331, 2364, 2661, 3883, 4727 |
| Bsh1285I | CGRYCG | 3 cut(s) | 2022, 2242, 2368 |
| BshNI | GGYRCC | 5 cut(s) | 1990, 2014, 4660, 4985, 5084 |
| BshTI | ACCGGT | 3 cut(s) | 3910, 4190, 4879 |
| BsiEI | CGRYCG | 3 cut(s) | 2022, 2242, 2368 |
| BsiHKAI | GWGCWC | 3 cut(s) | 51, 2506, 2518 |
| BsiHKCI | CYCGRG | 2 cut(s) | 655, 1491 |
| BslFI | GGGAC | 5 cut(s) | 2641, 2833, 3036, 3907, 4701 |
| BsmBI | CGTCTC | 5 cut(s) | 2176, 2567, 2807, 3389, 3849 |
| BsmFI | GGGAC | 5 cut(s) | 2641, 2833, 3036, 3907, 4701 |
| BsmI | GAATGC | 4 cut(s) | 1878, 2989, 4543, 5193 |
| Bso31I | GGTCTC | 4 cut(s) | 150, 2298, 4931, 5383 |
| BsoBI | CYCGRG | 2 cut(s) | 655, 1491 |
| Bsp119I | TTCGAA | 1 cut(s) | 2993 |
| Bsp1286I | GDGCHC | 8 cut(s) | 51, 565, 1993, 2506, 2518, 3889, 4104, 4653 |
| Bsp13I | TCCGGA | 1 cut(s) | 2788 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2580 |
| Bsp19I | CCATGG | 3 cut(s) | 132, 3367, 4114 |
| Bsp68I | TCGCGA | 1 cut(s) | 2364 |
| BspEI | TCCGGA | 1 cut(s) | 2788 |
| BspFNI | CGCG | 8 cut(s) | 1724, 2193, 2232, 2331, 2364, 2661, 3883, 4727 |
| BspHI | TCATGA | 2 cut(s) | 469, 5632 |
| BspMAI | CTGCAG | 2 cut(s) | 751, 1248 |
| BspMI | ACCTGC | 1 cut(s) | 4102 |
| BspOI | GCTAGC | 1 cut(s) | 1488 |
| BspQI | GCTCTTC | 5 cut(s) | 375, 1350, 1848, 2118, 2203 |
| BspT104I | TTCGAA | 1 cut(s) | 2993 |
| BspT107I | GGYRCC | 5 cut(s) | 1990, 2014, 4660, 4985, 5084 |
| BspTI | CTTAAG | 3 cut(s) | 409, 1439, 4148 |
| BspTNI | GGTCTC | 4 cut(s) | 150, 2298, 4931, 5383 |
| BsrDI | GCAATG | 1 cut(s) | 2854 |
| BsrFI | RCCGGY | 7 cut(s) | 1694, 2017, 3910, 3973, 4190, 4879, 4993 |
| BsrI | ACTGG | 9 cut(s) | 558, 1115, 1219, 1236, 1739, 3457, 3500, 3874, 5467 |
| BssAI | RCCGGY | 7 cut(s) | 1694, 2017, 3910, 3973, 4190, 4879, 4993 |
| BssNI | GRCGYC | 2 cut(s) | 4661, 5085 |
| BssSI | CACGAG | 2 cut(s) | 2208, 4587 |
| BssT1I | CCWWGG | 8 cut(s) | 132, 1050, 2594, 3270, 3367, 4114, 4873, 5658 |
| Bst2BI | CACGAG | 2 cut(s) | 2208, 4587 |
| Bst2UI | CCWGG | 8 cut(s) | 25, 590, 1038, 1790, 2180, 3983, 4129, 5244 |
| BstACI | GRCGYC | 2 cut(s) | 4661, 5085 |
| BstAFI | CTTAAG | 3 cut(s) | 409, 1439, 4148 |
| BstBAI | YACGTR | 2 cut(s) | 221, 2264 |
| BstBI | TTCGAA | 1 cut(s) | 2993 |
| BstC8I | GCNNGC | 7 cut(s) | 1329, 1486, 3885, 3975, 4659, 5548, 5729 |
| BstDSI | CCRYGG | 6 cut(s) | 132, 2191, 2407, 3367, 4114, 4725 |
| BstEII | GGTNACC | 2 cut(s) | 4801, 5042 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 409 |
| BstFNI | CGCG | 8 cut(s) | 1724, 2193, 2232, 2331, 2364, 2661, 3883, 4727 |
| BstH2I | RGCGCY | 3 cut(s) | 125, 4664, 5088 |
| BstHHI | GCGC | 5 cut(s) | 124, 900, 4063, 4663, 5087 |
| BstMCI | CGRYCG | 3 cut(s) | 2022, 2242, 2368 |
| BstNI | CCWGG | 8 cut(s) | 25, 590, 1038, 1790, 2180, 3983, 4129, 5244 |
| BstNSI | RCATGY | 5 cut(s) | 311, 325, 1093, 3633, 5561 |
| BstPI | GGTNACC | 2 cut(s) | 4801, 5042 |
| BstSFI | CTRYAG | 3 cut(s) | 266, 747, 1244 |
| BstSLI | GKGCMC | 4 cut(s) | 565, 1993, 3889, 4104 |
| BstSNI | TACGTA | 1 cut(s) | 221 |
| BstUI | CGCG | 8 cut(s) | 1724, 2193, 2232, 2331, 2364, 2661, 3883, 4727 |
| BstV2I | GAAGAC | 1 cut(s) | 5024 |
| BstX2I | RGATCY | 3 cut(s) | 128, 5056, 5290 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 4338, 4589, 4696 |
| BstYI | RGATCY | 3 cut(s) | 128, 5056, 5290 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3055 |
| BtgI | CCRYGG | 6 cut(s) | 132, 2191, 2407, 3367, 4114, 4725 |
| BtgZI | GCGATG | 1 cut(s) | 4265 |
| BtrI | CACGTC | 4 cut(s) | 870, 1081, 2561, 3133 |
| BtsI | GCAGTG | 5 cut(s) | 489, 617, 1803, 1818, 2565 |
| BtuMI | TCGCGA | 1 cut(s) | 2364 |
| BveI | ACCTGC | 1 cut(s) | 4102 |
| Cac8I | GCNNGC | 7 cut(s) | 1329, 1486, 3885, 3975, 4659, 5548, 5729 |
| CaiI | CAGNNNCTG | 1 cut(s) | 977 |
| CciI | TCATGA | 2 cut(s) | 469, 5632 |
| CfoI | GCGC | 5 cut(s) | 124, 900, 4063, 4663, 5087 |
| Cfr10I | RCCGGY | 7 cut(s) | 1694, 2017, 3910, 3973, 4190, 4879, 4993 |
| Cfr42I | CCGCGG | 2 cut(s) | 2194, 4728 |
| Cfr9I | CCCGGG | 1 cut(s) | 655 |
| CseI | GACGC | 5 cut(s) | 517, 1697, 2158, 3132, 3465 |
| CsiI | ACCWGGT | 2 cut(s) | 588, 4127 |
| CspAI | ACCGGT | 3 cut(s) | 3910, 4190, 4879 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2287, 2322 |
| DinI | GGCGCC | 2 cut(s) | 4662, 5086 |
| DraI | TTTAAA | 2 cut(s) | 2970, 3612 |
| DraIII | CACNNNGTG | 1 cut(s) | 1117 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 2168, 5028 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 2168, 5028 |
| EaeI | YGGCCR | 4 cut(s) | 994, 2212, 2251, 4254 |
| EciI | GGCGGA | 2 cut(s) | 2145, 3437 |
| Ecl136II | GAGCTC | 1 cut(s) | 49 |
| Eco105I | TACGTA | 1 cut(s) | 221 |
| Eco130I | CCWWGG | 8 cut(s) | 132, 1050, 2594, 3270, 3367, 4114, 4873, 5658 |
| Eco24I | GRGCYC | 2 cut(s) | 51, 4653 |
| Eco31I | GGTCTC | 4 cut(s) | 150, 2298, 4931, 5383 |
| Eco47I | GGWCC | 9 cut(s) | 484, 1747, 2438, 4131, 4193, 4870, 4877, 4909, 5385 |
| Eco53kI | GAGCTC | 1 cut(s) | 49 |
| Eco57I | CTGAAG | 6 cut(s) | 242, 1356, 1829, 3258, 5018, 5415 |
| Eco72I | CACGTG | 1 cut(s) | 2264 |
| Eco81I | CCTNAGG | 1 cut(s) | 3055 |
| Eco88I | CYCGRG | 2 cut(s) | 655, 1491 |
| Eco91I | GGTNACC | 2 cut(s) | 4801, 5042 |
| EcoICRI | GAGCTC | 1 cut(s) | 49 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 409 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1792, 4870, 5662 |
| EcoO65I | GGTNACC | 2 cut(s) | 4801, 5042 |
| EcoRI | GAATTC | 3 cut(s) | 753, 1287, 4360 |
| EcoRII | CCWGG | 8 cut(s) | 23, 588, 1036, 1788, 2178, 3981, 4127, 5242 |
| EcoT14I | CCWWGG | 8 cut(s) | 132, 1050, 2594, 3270, 3367, 4114, 4873, 5658 |
| EcoT22I | ATGCAT | 2 cut(s) | 631, 4983 |
| EcoT38I | GRGCYC | 2 cut(s) | 51, 4653 |
| EgeI | GGCGCC | 2 cut(s) | 4662, 5086 |
| EheI | GGCGCC | 2 cut(s) | 4662, 5086 |
| ErhI | CCWWGG | 8 cut(s) | 132, 1050, 2594, 3270, 3367, 4114, 4873, 5658 |
| Esp3I | CGTCTC | 5 cut(s) | 2176, 2567, 2807, 3389, 3849 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1347, 1379 |
| FaqI | GGGAC | 5 cut(s) | 2641, 2833, 3036, 3907, 4701 |
| FauI | CCCGC | 7 cut(s) | 816, 1729, 2198, 2666, 4002, 5555, 5724 |
| FauNDI | CATATG | 1 cut(s) | 339 |
| FbaI | TGATCA | 3 cut(s) | 64, 1783, 5635 |
| FblI | GTMKAC | 2 cut(s) | 1429, 3447 |
| FriOI | GRGCYC | 2 cut(s) | 51, 4653 |
| FspBI | CTAG | 5 cut(s) | 1274, 1485, 2985, 3336, 3900 |
| FspI | TGCGCA | 1 cut(s) | 899 |
| GlaI | GCGC | 5 cut(s) | 123, 899, 4062, 4662, 5086 |
| GsaI | CCCAGC | 1 cut(s) | 2593 |
| GsuI | CTGGAG | 7 cut(s) | 954, 999, 1892, 2149, 3965, 4050, 5450 |
| HaeII | RGCGCY | 3 cut(s) | 125, 4664, 5088 |
| HgaI | GACGC | 5 cut(s) | 517, 1697, 2158, 3132, 3465 |
| HhaI | GCGC | 5 cut(s) | 124, 900, 4063, 4663, 5087 |
| Hin1I | GRCGYC | 2 cut(s) | 4661, 5085 |
| Hin6I | GCGC | 5 cut(s) | 122, 898, 4061, 4661, 5085 |
| HinP1I | GCGC | 5 cut(s) | 122, 898, 4061, 4661, 5085 |
| HincII | GTYRAC | 6 cut(s) | 544, 1031, 1078, 3448, 5134, 5411 |
| HindII | GTYRAC | 6 cut(s) | 544, 1031, 1078, 3448, 5134, 5411 |
| HindIII | AAGCTT | 3 cut(s) | 1329, 2765, 5699 |
| Hpy99I | CGWCG | 8 cut(s) | 1390, 1691, 2396, 2687, 3134, 3481, 4638, 5025 |
| Hsp92I | GRCGYC | 2 cut(s) | 4661, 5085 |
| HspAI | GCGC | 5 cut(s) | 122, 898, 4061, 4661, 5085 |
| KasI | GGCGCC | 2 cut(s) | 4660, 5084 |
| Kpn2I | TCCGGA | 1 cut(s) | 2788 |
| KroI | GCCGGC | 1 cut(s) | 3973 |
| KroNI | GCCGGC | 1 cut(s) | 3975 |
| Ksp22I | TGATCA | 3 cut(s) | 64, 1783, 5635 |
| KspI | CCGCGG | 2 cut(s) | 2194, 4728 |
| LguI | GCTCTTC | 5 cut(s) | 375, 1350, 1848, 2118, 2203 |
| LmnI | GCTCC | 8 cut(s) | 980, 1444, 2158, 2417, 2735, 3112, 4078, 5605 |
| MabI | ACCWGGT | 2 cut(s) | 588, 4127 |
| MaeI | CTAG | 5 cut(s) | 1274, 1485, 2985, 3336, 3900 |
| MfeI | CAATTG | 2 cut(s) | 1634, 1973 |
| MflI | RGATCY | 3 cut(s) | 128, 5056, 5290 |
| MhlI | GDGCHC | 8 cut(s) | 51, 565, 1993, 2506, 2518, 3889, 4104, 4653 |
| MlsI | TGGCCA | 1 cut(s) | 996 |
| MluNI | TGGCCA | 1 cut(s) | 996 |
| Mly113I | GGCGCC | 2 cut(s) | 4661, 5085 |
| MlyI | GAGTC | 8 cut(s) | 161, 635, 983, 1571, 2156, 3931, 4288, 5095 |
| Mox20I | TGGCCA | 1 cut(s) | 996 |
| Mph1103I | ATGCAT | 2 cut(s) | 631, 4983 |
| MroI | TCCGGA | 1 cut(s) | 2788 |
| MroNI | GCCGGC | 1 cut(s) | 3973 |
| MscI | TGGCCA | 1 cut(s) | 996 |
| MslI | CAYNNNNRTG | 4 cut(s) | 2892, 4056, 4904, 4976 |
| Msp20I | TGGCCA | 1 cut(s) | 996 |
| MspA1I | CMGCKG | 5 cut(s) | 811, 2193, 4381, 4727, 5426 |
| MspCI | CTTAAG | 3 cut(s) | 409, 1439, 4148 |
| MunI | CAATTG | 2 cut(s) | 1634, 1973 |
| Mva1269I | GAATGC | 4 cut(s) | 1878, 2989, 4543, 5193 |
| MvaI | CCWGG | 8 cut(s) | 25, 590, 1038, 1790, 2180, 3983, 4129, 5244 |
| MvnI | CGCG | 8 cut(s) | 1724, 2193, 2232, 2331, 2364, 2661, 3883, 4727 |
| NaeI | GCCGGC | 1 cut(s) | 3975 |
| NarI | GGCGCC | 2 cut(s) | 4661, 5085 |
| NciI | CCSGG | 9 cut(s) | 656, 657, 1987, 2611, 4425, 4807, 5287, 5314, 5534 |
| NcoI | CCATGG | 3 cut(s) | 132, 3367, 4114 |
| NdeI | CATATG | 1 cut(s) | 339 |
| NgoMIV | GCCGGC | 1 cut(s) | 3973 |
| NheI | GCTAGC | 1 cut(s) | 1484 |
| NmeAIII | GCCGAG | 4 cut(s) | 1652, 2153, 5425, 5533 |
| NruI | TCGCGA | 1 cut(s) | 2364 |
| NsbI | TGCGCA | 1 cut(s) | 899 |
| NsiI | ATGCAT | 2 cut(s) | 631, 4983 |
| NspI | RCATGY | 5 cut(s) | 311, 325, 1093, 3633, 5561 |
| NspV | TTCGAA | 1 cut(s) | 2993 |
| PaeR7I | CTCGAG | 1 cut(s) | 1491 |
| PagI | TCATGA | 2 cut(s) | 469, 5632 |
| PaqCI | CACCTGC | 1 cut(s) | 4102 |
| PciI | ACATGT | 2 cut(s) | 321, 1089 |
| PciSI | GCTCTTC | 5 cut(s) | 375, 1350, 1848, 2118, 2203 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 2691, 3433, 5197 |
| PctI | GAATGC | 4 cut(s) | 1878, 2989, 4543, 5193 |
| PdiI | GCCGGC | 1 cut(s) | 3975 |
| PfeI | GAWTC | 7 cut(s) | 1148, 1265, 1925, 2606, 2678, 2824, 3373 |
| PflFI | GACNNNGTC | 1 cut(s) | 250 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 977 |
| PinAI | ACCGGT | 3 cut(s) | 3910, 4190, 4879 |
| Ple19I | CGATCG | 2 cut(s) | 2242, 2368 |
| PleI | GAGTC | 8 cut(s) | 161, 635, 982, 1571, 2156, 3931, 4288, 5095 |
| PluTI | GGCGCC | 2 cut(s) | 4664, 5088 |
| PmaCI | CACGTG | 1 cut(s) | 2264 |
| PmlI | CACGTG | 1 cut(s) | 2264 |
| PpsI | GAGTC | 8 cut(s) | 161, 635, 982, 1571, 2156, 3931, 4288, 5095 |
| Ppu21I | YACGTR | 2 cut(s) | 221, 2264 |
| PpuMI | RGGWCCY | 1 cut(s) | 4870 |
| PscI | ACATGT | 2 cut(s) | 321, 1089 |
| PshBI | ATTAAT | 1 cut(s) | 686 |
| PsiI | TTATAA | 1 cut(s) | 74 |
| Psp124BI | GAGCTC | 1 cut(s) | 51 |
| Psp5II | RGGWCCY | 1 cut(s) | 4870 |
| Psp6I | CCWGG | 8 cut(s) | 23, 588, 1036, 1788, 2178, 3981, 4127, 5242 |
| PspCI | CACGTG | 1 cut(s) | 2264 |
| PspEI | GGTNACC | 2 cut(s) | 4801, 5042 |
| PspFI | CCCAGC | 1 cut(s) | 2589 |
| PspGI | CCWGG | 8 cut(s) | 23, 588, 1036, 1788, 2178, 3981, 4127, 5242 |
| PspPPI | RGGWCCY | 1 cut(s) | 4870 |
| PspXI | VCTCGAGB | 1 cut(s) | 1491 |
| PstI | CTGCAG | 2 cut(s) | 751, 1248 |
| PstNI | CAGNNNCTG | 1 cut(s) | 977 |
| PsuI | RGATCY | 3 cut(s) | 128, 5056, 5290 |
| PsyI | GACNNNGTC | 1 cut(s) | 250 |
| PvuI | CGATCG | 2 cut(s) | 2242, 2368 |
| RruI | TCGCGA | 1 cut(s) | 2364 |
| RseI | CAYNNNNRTG | 4 cut(s) | 2892, 4056, 4904, 4976 |
| SacI | GAGCTC | 1 cut(s) | 51 |
| SacII | CCGCGG | 2 cut(s) | 2194, 4728 |
| SalI | GTCGAC | 1 cut(s) | 3446 |
| SapI | GCTCTTC | 5 cut(s) | 375, 1350, 1848, 2118, 2203 |
| ScaI | AGTACT | 1 cut(s) | 3552 |
| SchI | GAGTC | 8 cut(s) | 161, 635, 983, 1571, 2156, 3931, 4288, 5095 |
| SduI | GDGCHC | 8 cut(s) | 51, 565, 1993, 2506, 2518, 3889, 4104, 4653 |
| SexAI | ACCWGGT | 2 cut(s) | 588, 4127 |
| SfcI | CTRYAG | 3 cut(s) | 266, 747, 1244 |
| SfoI | GGCGCC | 2 cut(s) | 4662, 5086 |
| Sfr274I | CTCGAG | 1 cut(s) | 1491 |
| Sfr303I | CCGCGG | 2 cut(s) | 2194, 4728 |
| SfuI | TTCGAA | 1 cut(s) | 2993 |
| SgrAI | CRCCGGYG | 1 cut(s) | 3910 |
| SgrBI | CCGCGG | 2 cut(s) | 2194, 4728 |
| SinI | GGWCC | 9 cut(s) | 484, 1747, 2438, 4131, 4193, 4870, 4877, 4909, 5385 |
| SlaI | CTCGAG | 1 cut(s) | 1491 |
| SmaI | CCCGGG | 1 cut(s) | 657 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 2892, 4056, 4904, 4976 |
| SmlI | CTYRAG | 7 cut(s) | 409, 1439, 1491, 2105, 3113, 4148, 4652 |
| SmoI | CTYRAG | 7 cut(s) | 409, 1439, 1491, 2105, 3113, 4148, 4652 |
| SnaBI | TACGTA | 1 cut(s) | 221 |
| SpeI | ACTAGT | 1 cut(s) | 3335 |
| SspDI | GGCGCC | 2 cut(s) | 4660, 5084 |
| SspI | AATATT | 5 cut(s) | 1068, 2755, 3173, 3250, 4324 |
| SspMI | CTAG | 5 cut(s) | 1274, 1485, 2985, 3336, 3900 |
| SstI | GAGCTC | 1 cut(s) | 51 |
| StyI | CCWWGG | 8 cut(s) | 132, 1050, 2594, 3270, 3367, 4114, 4873, 5658 |
| TaqI | TCGA | 9 cut(s) | 711, 843, 1388, 1492, 1517, 2993, 3447, 3479, 5683 |
| TaqII | GACCGA | 1 cut(s) | 5373 |
| TatI | WGTACW | 6 cut(s) | 876, 1228, 1495, 3550, 5707, 5717 |
| TauI | GCSGC | 7 cut(s) | 1802, 2196, 2217, 2235, 2238, 4629, 5183 |
| TfiI | GAWTC | 7 cut(s) | 1148, 1265, 1925, 2606, 2678, 2824, 3373 |
| TspGWI | ACGGA | 6 cut(s) | 942, 2346, 2396, 2671, 4844, 5447 |
| TspMI | CCCGGG | 1 cut(s) | 655 |
| Tth111I | GACNNNGTC | 1 cut(s) | 250 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 977 |
| Vha464I | CTTAAG | 3 cut(s) | 409, 1439, 4148 |
| VpaK11BI | GGWCC | 9 cut(s) | 484, 1747, 2438, 4131, 4193, 4870, 4877, 4909, 5385 |
| VspI | ATTAAT | 1 cut(s) | 686 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 409 |
| XceI | RCATGY | 5 cut(s) | 311, 325, 1093, 3633, 5561 |
| XhoI | CTCGAG | 1 cut(s) | 1491 |
| XmaI | CCCGGG | 1 cut(s) | 655 |
| XmiI | GTMKAC | 2 cut(s) | 1429, 3447 |
| XspI | CTAG | 5 cut(s) | 1274, 1485, 2985, 3336, 3900 |
| ZrmI | AGTACT | 1 cut(s) | 3552 |
| Zsp2I | ATGCAT | 2 cut(s) | 631, 4983 |