pycom05g14310

proton-transporting ATP synthase activity, rotational mechanism

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0000889
Physical Location & Seq
Forward (+)
17851244 .. 17851588
345 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g14310.1

Sequence Viewer

Length: 345 bp
ATGGCAGGTGCTTGTTGCGAGATAGTTTGGCTTCGTTTTTTGTTGAAGGATTTGAACATTCCTTTGGATTGTCCTTCCACTTTATTTTGTGATAATCAAGCAGCGTTACATATAACTGCCAATCCTGTTTTTCATGAACGAACTCGTCACATTGAGATGGATTGTCACTTTATACGAGATAAGATTGTAGATGGCACAATAGAGACCAAGCATGTGGGTACGGCACAACAGTTGGCAGACTTGTTTACCAAACCTCTTGGGAAAGAAAAGTTTTCGGGTATGTTACGCAAGTTGGGAGTTCTTGACATCCACTCTCCAACTTGCGGGGGAGTGTTAGACAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000275 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0005753 GO:0005754 GO:0006139 GO:0006163 GO:0006164 GO:0006725 GO:0006753 GO:0006754 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008152 GO:0008324 GO:0009058 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009167 GO:0009168 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009987 GO:0010035 GO:0010038 GO:0015075 GO:0015077 GO:0015078 GO:0015318 GO:0015399 GO:0015405 GO:0015672 GO:0015985 GO:0015986 GO:0016020 GO:0016462 GO:0016469 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0017144 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0019829 GO:0019866 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0032991 GO:0033178 GO:0034220 GO:0034641 GO:0034654 GO:0042221 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0044769 GO:0045259 GO:0045261 GO:0045267 GO:0046034 GO:0046390 GO:0046483 GO:0046689 GO:0046933 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0055086 GO:0071704 GO:0072521 GO:0072522 GO:0090407 GO:0090662 GO:0098655 GO:0098660 GO:0098662 GO:0098796 GO:0098798 GO:0098800 GO:0099131 GO:0099132 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1902600
KEGG Pathways
Metabolic & Signaling
ko00190 ko00195 ko00904 ko01100 ko04714 ko05010 ko05012 ko05016 map00190 map00195 map00904 map01100 map04714 map05010 map05012 map05016
Pfam Domains
Protein Families
ATP-synt_ab ATP-synt_ab_N FliG_C FliG_M FliG_N FliH Photo_RC

Protein Analysis

115

Amino Acids

12.73

Weight (kDa)

6.57

Isoelectric Point (pI)

45.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 324
AfaI GTAC 1 cut(s) 220
AfiI CCNNNNNNNGG 1 cut(s) 323
AgsI TTSAA 2 cut(s) 46, 55
AjuI GAANNNNNNNTTGG 2 cut(s) 47, 79
Alw26I GTCTC 1 cut(s) 197
ApeKI GCWGC 1 cut(s) 101
BbvI GCAGC 1 cut(s) 113
BccI CCATC 2 cut(s) 151, 185
BceAI ACGGC 1 cut(s) 237
BcoDI GTCTC 1 cut(s) 197
BisI GCNGC 1 cut(s) 102
BlsI GCNGC 1 cut(s) 103
BsaI GGTCTC 1 cut(s) 197
Bsc4I CCNNNNNNNGG 1 cut(s) 323
BseGI GGATG 1 cut(s) 306
BseLI CCNNNNNNNGG 1 cut(s) 323
BseXI GCAGC 1 cut(s) 113
BslI CCNNNNNNNGG 1 cut(s) 323
BsmAI GTCTC 1 cut(s) 197
Bso31I GGTCTC 1 cut(s) 197
BspACI CCGC 1 cut(s) 324
BspHI TCATGA 1 cut(s) 133
BspTNI GGTCTC 1 cut(s) 197
Bst4CI ACNGT 1 cut(s) 231
BstF5I GGATG 1 cut(s) 306
BstMAI GTCTC 1 cut(s) 197
BstNSI RCATGY 1 cut(s) 215
BstV1I GCAGC 1 cut(s) 113
BstXI CCANNNNNNTGG 1 cut(s) 214
BtsCI GGATG 1 cut(s) 306
CciI TCATGA 1 cut(s) 133
Csp6I GTAC 1 cut(s) 219
CviAII CATG 2 cut(s) 134, 212
CviJI RGCY 1 cut(s) 31
CviKI_1 RGCY 1 cut(s) 31
CviQI GTAC 1 cut(s) 219
Eco31I GGTCTC 1 cut(s) 197
FaeI CATG 2 cut(s) 137, 215
FaiI YATR 6 cut(s) 111, 113, 135, 173, 213, 281
FatI CATG 2 cut(s) 133, 211
FauI CCCGC 1 cut(s) 317
Fnu4HI GCNGC 1 cut(s) 102
FokI GGATG 1 cut(s) 293
Fsp4HI GCNGC 1 cut(s) 102
GluI GCNGC 1 cut(s) 102
Hin1II CATG 2 cut(s) 137, 215
Hpy166II GTNNAC 1 cut(s) 246
Hpy188III TCNNGA 2 cut(s) 134, 302
Hpy8I GTNNAC 1 cut(s) 246
HpyAV CCTTC 2 cut(s) 40, 84
HpyCH4III ACNGT 1 cut(s) 231
Hsp92II CATG 2 cut(s) 137, 215
LpnPI CCDG 1 cut(s) 138
Lsp1109I GCAGC 1 cut(s) 113
MaeIII GTNAC 4 cut(s) 105, 146, 164, 282
MmeI TCCRAC 1 cut(s) 341
MnlI CCTC 1 cut(s) 264
MslI CAYNNNNRTG 1 cut(s) 155
NlaIII CATG 2 cut(s) 137, 215
NmuCI GTSAC 2 cut(s) 146, 164
NspI RCATGY 1 cut(s) 215
PagI TCATGA 1 cut(s) 133
PkrI GCNGC 1 cut(s) 103
RsaI GTAC 1 cut(s) 220
RsaNI GTAC 1 cut(s) 219
RseI CAYNNNNRTG 1 cut(s) 155
SatI GCNGC 1 cut(s) 102
SetI ASST 2 cut(s) 10, 256
SmiMI CAYNNNNRTG 1 cut(s) 155
SsiI CCGC 1 cut(s) 324
TaaI ACNGT 1 cut(s) 231
TseFI GTSAC 2 cut(s) 146, 164
TseI GCWGC 1 cut(s) 101
Tsp45I GTSAC 2 cut(s) 146, 164
TspDTI ATGAA 2 cut(s) 122, 150
XceI RCATGY 1 cut(s) 215
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.