Mitochondrial protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Retrotran_gag_2 | PF14223 | 132 - 298 | 3.9e-19 | gag-polypeptide of LTR copia-type |
| Pol_BBD | PF22936 | 418 - 495 | 3.6e-08 | Pol polyprotein, beta-barrel domain |
| gag_pre-integrs | PF13976 | 528 - 596 | 1.5e-10 | GAG-pre-integrase domain |
| rve | PF00665 | 611 - 709 | 5.2e-13 | Integrase core domain |
| SH3_retrovirus | PF25597 | 783 - 842 | 5.5e-23 | Retroviral polymerase SH3-like domain |
| RVT_2 | PF07727 | 1012 - 1253 | 1.4e-69 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 114, 3183 |
| AatII | GACGTC | 1 cut(s) | 1214 |
| Acc36I | ACCTGC | 1 cut(s) | 1352 |
| Acc65I | GGTACC | 1 cut(s) | 1729 |
| AccB1I | GGYRCC | 4 cut(s) | 1268, 1729, 1742, 2988 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2998, 3255 |
| AccI | GTMKAC | 1 cut(s) | 3492 |
| AccII | CGCG | 8 cut(s) | 800, 990, 1021, 1023, 1924, 2269, 3929, 4206 |
| AclI | AACGTT | 1 cut(s) | 3382 |
| AclWI | GGATC | 6 cut(s) | 414, 513, 711, 2466, 3785, 4125 |
| AcoI | YGGCCR | 1 cut(s) | 894 |
| AcsI | RAATTY | 8 cut(s) | 381, 636, 1706, 1826, 1971, 2300, 3722, 4430 |
| AcuI | CTGAAG | 3 cut(s) | 1280, 1980, 3330 |
| AcvI | CACGTG | 1 cut(s) | 953 |
| AcyI | GRCGYC | 2 cut(s) | 1211, 1644 |
| AfaI | GTAC | 7 cut(s) | 485, 1589, 1731, 2426, 3118, 3654, 3842 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 741, 1739, 2472, 2524, 2525, 2998, 3255, 3334 |
| AflII | CTTAAG | 1 cut(s) | 172 |
| AflIII | ACRYGT | 5 cut(s) | 451, 1193, 2267, 2328, 2668 |
| AjiI | CACGTC | 5 cut(s) | 624, 959, 1196, 2671, 3277 |
| AjnI | CCWGG | 6 cut(s) | 590, 699, 1126, 2560, 3988, 4097 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 4268, 4300 |
| AleI | CACNNNNGTG | 2 cut(s) | 1663, 2735 |
| Alw21I | GWGCWC | 2 cut(s) | 3835, 4106 |
| AlwI | GGATC | 6 cut(s) | 414, 513, 711, 2466, 3785, 4125 |
| Ama87I | CYCGRG | 2 cut(s) | 582, 2420 |
| ApaI | GGGCCC | 2 cut(s) | 798, 3627 |
| ApeKI | GCWGC | 8 cut(s) | 499, 821, 871, 1013, 1054, 2084, 4172, 4351 |
| ApoI | RAATTY | 8 cut(s) | 381, 636, 1706, 1826, 1971, 2300, 3722, 4430 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1093, 1125 |
| AseI | ATTAAT | 1 cut(s) | 528 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 768, 1887 |
| Asp718I | GGTACC | 1 cut(s) | 1729 |
| AspA2I | CCTAGG | 1 cut(s) | 3410 |
| AspLEI | GCGC | 4 cut(s) | 1023, 3267, 3327, 3409 |
| AsuC2I | CCSGG | 2 cut(s) | 1565, 1649 |
| AsuII | TTCGAA | 1 cut(s) | 1173 |
| AvaI | CYCGRG | 2 cut(s) | 582, 2420 |
| AvaII | GGWCC | 4 cut(s) | 354, 1537, 3001, 4381 |
| AvrII | CCTAGG | 1 cut(s) | 3410 |
| AxyI | CCTNAGG | 2 cut(s) | 38, 4503 |
| BaeGI | GKGCMC | 4 cut(s) | 798, 2117, 3627, 3781 |
| BanI | GGYRCC | 4 cut(s) | 1268, 1729, 1742, 2988 |
| BanII | GRGCYC | 3 cut(s) | 798, 3627, 4106 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1167, 1199 |
| BauI | CACGAG | 5 cut(s) | 831, 975, 2467, 2847, 4183 |
| BbrPI | CACGTG | 1 cut(s) | 953 |
| BbsI | GAAGAC | 2 cut(s) | 1559, 4124 |
| Bbv12I | GWGCWC | 2 cut(s) | 3835, 4106 |
| BbvI | GCAGC | 8 cut(s) | 511, 808, 858, 1000, 1066, 2071, 4159, 4363 |
| BccI | CCATC | 8 cut(s) | 406, 419, 452, 1140, 1595, 2803, 3107, 3340 |
| BceAI | ACGGC | 2 cut(s) | 594, 3227 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1350, 1384, 2094, 2128 |
| BciT130I | CCWGG | 6 cut(s) | 592, 701, 1128, 2562, 3990, 4099 |
| BciVI | GTATCC | 1 cut(s) | 2438 |
| BclI | TGATCA | 3 cut(s) | 1305, 3346, 3582 |
| BcnI | CCSGG | 2 cut(s) | 1565, 1649 |
| BfmI | CTRYAG | 3 cut(s) | 3120, 3478, 3836 |
| BfoI | RGCGCY | 1 cut(s) | 3410 |
| BfrI | CTTAAG | 1 cut(s) | 172 |
| BfuAI | ACCTGC | 1 cut(s) | 1352 |
| BfuI | GTATCC | 1 cut(s) | 2438 |
| BglII | AGATCT | 2 cut(s) | 217, 4179 |
| BlnI | CCTAGG | 1 cut(s) | 3410 |
| Bme1390I | CCNGG | 8 cut(s) | 592, 701, 1128, 1565, 1649, 2562, 3990, 4099 |
| Bme18I | GGWCC | 4 cut(s) | 354, 1537, 3001, 4381 |
| BmeT110I | CYCGRG | 2 cut(s) | 582, 2420 |
| BmgBI | CACGTC | 5 cut(s) | 624, 959, 1196, 2671, 3277 |
| BmiI | GGNNCC | 9 cut(s) | 796, 1256, 1270, 1731, 1744, 2990, 3624, 3625, 4190 |
| BmrFI | CCNGG | 8 cut(s) | 592, 701, 1128, 1565, 1649, 2562, 3990, 4099 |
| BmrI | ACTGGG | 1 cut(s) | 3994 |
| BmsI | GCATC | 7 cut(s) | 626, 1460, 2215, 3721, 3811, 3985, 4009 |
| BmuI | ACTGGG | 1 cut(s) | 3994 |
| BpiI | GAAGAC | 2 cut(s) | 1559, 4124 |
| BpmI | CTGGAG | 4 cut(s) | 1851, 3192, 4080, 4120 |
| Bpu14I | TTCGAA | 1 cut(s) | 1173 |
| BpuEI | CTTGAG | 3 cut(s) | 623, 881, 4111 |
| BpuMI | CCSGG | 2 cut(s) | 1565, 1649 |
| BsaAI | YACGTR | 2 cut(s) | 953, 1427 |
| BsaHI | GRCGYC | 2 cut(s) | 1211, 1644 |
| BsaI | GGTCTC | 2 cut(s) | 192, 1089 |
| BsaWI | WCCGGW | 3 cut(s) | 3751, 4191, 4450 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 369, 399, 4238, 4268 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 741, 1739, 2472, 2524, 2525, 2998, 3255, 3334 |
| Bse21I | CCTNAGG | 2 cut(s) | 38, 4503 |
| Bse3DI | GCAATG | 3 cut(s) | 1212, 1832, 3003 |
| BseBI | CCWGG | 6 cut(s) | 592, 701, 1128, 2562, 3990, 4099 |
| BseGI | GGATG | 7 cut(s) | 617, 1132, 1451, 2122, 2795, 3039, 3802 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 741, 1739, 2472, 2524, 2525, 2998, 3255, 3334 |
| BseMI | GCAATG | 3 cut(s) | 1212, 1832, 3003 |
| BseMII | CTCAG | 7 cut(s) | 52, 115, 638, 3694, 4167, 4391, 4517 |
| BseRI | GAGGAG | 3 cut(s) | 77, 988, 4246 |
| BseSI | GKGCMC | 4 cut(s) | 798, 2117, 3627, 3781 |
| BseXI | GCAGC | 8 cut(s) | 511, 808, 858, 1000, 1066, 2071, 4159, 4363 |
| BseYI | CCCAGC | 1 cut(s) | 740 |
| BsgI | GTGCAG | 2 cut(s) | 518, 807 |
| Bsh1236I | CGCG | 8 cut(s) | 800, 990, 1021, 1023, 1924, 2269, 3929, 4206 |
| Bsh1285I | CGRYCG | 2 cut(s) | 333, 4196 |
| BshNI | GGYRCC | 4 cut(s) | 1268, 1729, 1742, 2988 |
| BsiEI | CGRYCG | 2 cut(s) | 333, 4196 |
| BsiHKAI | GWGCWC | 2 cut(s) | 3835, 4106 |
| BsiHKCI | CYCGRG | 2 cut(s) | 582, 2420 |
| BsiSI | CCGG | 5 cut(s) | 1564, 1648, 3752, 4192, 4451 |
| BslFI | GGGAC | 4 cut(s) | 2541, 2669, 2703, 2740 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 741, 1739, 2472, 2524, 2525, 2998, 3255, 3334 |
| BsmBI | CGTCTC | 4 cut(s) | 630, 2464, 3182, 3683 |
| BsmFI | GGGAC | 4 cut(s) | 2541, 2669, 2703, 2740 |
| BsmI | GAATGC | 4 cut(s) | 718, 926, 1169, 1621 |
| Bso31I | GGTCTC | 2 cut(s) | 192, 1089 |
| BsoBI | CYCGRG | 2 cut(s) | 582, 2420 |
| Bsp119I | TTCGAA | 1 cut(s) | 1173 |
| Bsp120I | GGGCCC | 2 cut(s) | 794, 3623 |
| Bsp1286I | GDGCHC | 6 cut(s) | 798, 2117, 3627, 3781, 3835, 4106 |
| Bsp19I | CCATGG | 1 cut(s) | 252 |
| Bsp68I | TCGCGA | 1 cut(s) | 1924 |
| BspCNI | CTCAG | 7 cut(s) | 51, 114, 639, 3693, 4168, 4390, 4516 |
| BspFNI | CGCG | 8 cut(s) | 800, 990, 1021, 1023, 1924, 2269, 3929, 4206 |
| BspLI | GGNNCC | 9 cut(s) | 796, 1256, 1270, 1731, 1744, 2990, 3624, 3625, 4190 |
| BspMI | ACCTGC | 1 cut(s) | 1352 |
| BspPI | GGATC | 6 cut(s) | 414, 513, 711, 2466, 3785, 4125 |
| BspT104I | TTCGAA | 1 cut(s) | 1173 |
| BspT107I | GGYRCC | 4 cut(s) | 1268, 1729, 1742, 2988 |
| BspTI | CTTAAG | 1 cut(s) | 172 |
| BspTNI | GGTCTC | 2 cut(s) | 192, 1089 |
| BsrDI | GCAATG | 3 cut(s) | 1212, 1832, 3003 |
| BssNI | GRCGYC | 2 cut(s) | 1211, 1644 |
| BssSI | CACGAG | 5 cut(s) | 831, 975, 2467, 2847, 4183 |
| BssT1I | CCWWGG | 4 cut(s) | 252, 1063, 2360, 3410 |
| Bst2BI | CACGAG | 5 cut(s) | 831, 975, 2467, 2847, 4183 |
| Bst2UI | CCWGG | 6 cut(s) | 592, 701, 1128, 2562, 3990, 4099 |
| Bst6I | CTCTTC | 1 cut(s) | 1740 |
| BstACI | GRCGYC | 2 cut(s) | 1211, 1644 |
| BstAFI | CTTAAG | 1 cut(s) | 172 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 4028 |
| BstBAI | YACGTR | 2 cut(s) | 953, 1427 |
| BstBI | TTCGAA | 1 cut(s) | 1173 |
| BstC8I | GCNNGC | 6 cut(s) | 568, 798, 1671, 2261, 2979, 4475 |
| BstDSI | CCRYGG | 4 cut(s) | 252, 327, 1006, 3927 |
| BstEII | GGTNACC | 4 cut(s) | 1682, 1794, 2564, 4034 |
| BstF5I | GGATG | 7 cut(s) | 617, 1132, 1451, 2122, 2795, 3039, 3802 |
| BstFNI | CGCG | 8 cut(s) | 800, 990, 1021, 1023, 1924, 2269, 3929, 4206 |
| BstH2I | RGCGCY | 1 cut(s) | 3410 |
| BstHHI | GCGC | 4 cut(s) | 1023, 3267, 3327, 3409 |
| BstMCI | CGRYCG | 2 cut(s) | 333, 4196 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 254, 827, 935, 1155, 3413, 4028, 4169 |
| BstNI | CCWGG | 6 cut(s) | 592, 701, 1128, 2562, 3990, 4099 |
| BstNSI | RCATGY | 6 cut(s) | 455, 1673, 2332, 2837, 2924, 2981 |
| BstPI | GGTNACC | 4 cut(s) | 1682, 1794, 2564, 4034 |
| BstSCI | CCNGG | 8 cut(s) | 590, 699, 1126, 1563, 1647, 2560, 3988, 4097 |
| BstSFI | CTRYAG | 3 cut(s) | 3120, 3478, 3836 |
| BstSLI | GKGCMC | 4 cut(s) | 798, 2117, 3627, 3781 |
| BstUI | CGCG | 8 cut(s) | 800, 990, 1021, 1023, 1924, 2269, 3929, 4206 |
| BstV1I | GCAGC | 8 cut(s) | 511, 808, 858, 1000, 1066, 2071, 4159, 4363 |
| BstV2I | GAAGAC | 2 cut(s) | 1559, 4124 |
| BstX2I | RGATCY | 5 cut(s) | 217, 406, 2458, 4130, 4179 |
| BstXI | CCANNNNNNTGG | 6 cut(s) | 1070, 1726, 3084, 3170, 4239, 4306 |
| BstYI | RGATCY | 5 cut(s) | 217, 406, 2458, 4130, 4179 |
| Bsu36I | CCTNAGG | 2 cut(s) | 38, 4503 |
| BsuI | GTATCC | 1 cut(s) | 2438 |
| BtgI | CCRYGG | 4 cut(s) | 252, 327, 1006, 3927 |
| BtrI | CACGTC | 5 cut(s) | 624, 959, 1196, 2671, 3277 |
| BtsCI | GGATG | 7 cut(s) | 617, 1132, 1451, 2122, 2795, 3039, 3802 |
| BtsI | GCAGTG | 4 cut(s) | 540, 924, 1164, 1612 |
| BtuMI | TCGCGA | 1 cut(s) | 1924 |
| BveI | ACCTGC | 1 cut(s) | 1352 |
| Cac8I | GCNNGC | 6 cut(s) | 568, 798, 1671, 2261, 2979, 4475 |
| CfoI | GCGC | 4 cut(s) | 1023, 3267, 3327, 3409 |
| Cfr42I | CCGCGG | 1 cut(s) | 3930 |
| CseI | GACGC | 5 cut(s) | 996, 1564, 1633, 3116, 3665 |
| CsiI | ACCWGGT | 1 cut(s) | 3988 |
| Csp6I | GTAC | 7 cut(s) | 484, 1588, 1730, 2425, 3117, 3653, 3841 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 354, 389 |
| CviQI | GTAC | 7 cut(s) | 484, 1588, 1730, 2425, 3117, 3653, 3841 |
| DraI | TTTAAA | 2 cut(s) | 1987, 4429 |
| EaeI | YGGCCR | 1 cut(s) | 894 |
| Eam1104I | CTCTTC | 1 cut(s) | 1740 |
| EarI | CTCTTC | 1 cut(s) | 1740 |
| EciI | GGCGGA | 2 cut(s) | 707, 4160 |
| Ecl136II | GAGCTC | 1 cut(s) | 4104 |
| Eco130I | CCWWGG | 4 cut(s) | 252, 1063, 2360, 3410 |
| Eco24I | GRGCYC | 3 cut(s) | 798, 3627, 4106 |
| Eco31I | GGTCTC | 2 cut(s) | 192, 1089 |
| Eco47I | GGWCC | 4 cut(s) | 354, 1537, 3001, 4381 |
| Eco53kI | GAGCTC | 1 cut(s) | 4104 |
| Eco57I | CTGAAG | 3 cut(s) | 1280, 1980, 3330 |
| Eco72I | CACGTG | 1 cut(s) | 953 |
| Eco81I | CCTNAGG | 2 cut(s) | 38, 4503 |
| Eco88I | CYCGRG | 2 cut(s) | 582, 2420 |
| Eco91I | GGTNACC | 4 cut(s) | 1682, 1794, 2564, 4034 |
| EcoICRI | GAGCTC | 1 cut(s) | 4104 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1537, 3623, 3624 |
| EcoO65I | GGTNACC | 4 cut(s) | 1682, 1794, 2564, 4034 |
| EcoRII | CCWGG | 6 cut(s) | 590, 699, 1126, 2560, 3988, 4097 |
| EcoT14I | CCWWGG | 4 cut(s) | 252, 1063, 2360, 3410 |
| EcoT22I | ATGCAT | 4 cut(s) | 619, 658, 1453, 2922 |
| EcoT38I | GRGCYC | 3 cut(s) | 798, 3627, 4106 |
| ErhI | CCWWGG | 4 cut(s) | 252, 1063, 2360, 3410 |
| Esp3I | CGTCTC | 4 cut(s) | 630, 2464, 3182, 3683 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 3683, 3715 |
| FaqI | GGGAC | 4 cut(s) | 2541, 2669, 2703, 2740 |
| FauI | CCCGC | 2 cut(s) | 805, 4024 |
| FbaI | TGATCA | 3 cut(s) | 1305, 3346, 3582 |
| FblI | GTMKAC | 1 cut(s) | 3492 |
| FokI | GGATG | 7 cut(s) | 604, 1119, 1438, 2109, 2782, 3046, 3789 |
| FriOI | GRGCYC | 3 cut(s) | 798, 3627, 4106 |
| GlaI | GCGC | 4 cut(s) | 1022, 3266, 3326, 3408 |
| GsaI | CCCAGC | 1 cut(s) | 744 |
| GsuI | CTGGAG | 4 cut(s) | 1851, 3192, 4080, 4120 |
| HaeII | RGCGCY | 1 cut(s) | 3410 |
| HapII | CCGG | 5 cut(s) | 1564, 1648, 3752, 4192, 4451 |
| HgaI | GACGC | 5 cut(s) | 996, 1564, 1633, 3116, 3665 |
| HhaI | GCGC | 4 cut(s) | 1023, 3267, 3327, 3409 |
| Hin1I | GRCGYC | 2 cut(s) | 1211, 1644 |
| Hin6I | GCGC | 4 cut(s) | 1021, 3265, 3325, 3407 |
| HinP1I | GCGC | 4 cut(s) | 1021, 3265, 3325, 3407 |
| HincII | GTYRAC | 4 cut(s) | 34, 2367, 4005, 4499 |
| HindII | GTYRAC | 4 cut(s) | 34, 2367, 4005, 4499 |
| HindIII | AAGCTT | 1 cut(s) | 4445 |
| HpaI | GTTAAC | 2 cut(s) | 2367, 4005 |
| HpaII | CCGG | 5 cut(s) | 1564, 1648, 3752, 4192, 4451 |
| Hpy99I | CGWCG | 3 cut(s) | 764, 3108, 3278 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 254, 827, 935, 1155, 3413, 4028, 4169 |
| Hsp92I | GRCGYC | 2 cut(s) | 1211, 1644 |
| HspAI | GCGC | 4 cut(s) | 1021, 3265, 3325, 3407 |
| KpnI | GGTACC | 1 cut(s) | 1733 |
| Ksp22I | TGATCA | 3 cut(s) | 1305, 3346, 3582 |
| KspAI | GTTAAC | 2 cut(s) | 2367, 4005 |
| KspI | CCGCGG | 1 cut(s) | 3930 |
| LmnI | GCTCC | 4 cut(s) | 1021, 1054, 1260, 4101 |
| Lsp1109I | GCAGC | 8 cut(s) | 511, 808, 858, 1000, 1066, 2071, 4159, 4363 |
| LweI | GCATC | 7 cut(s) | 626, 1460, 2215, 3721, 3811, 3985, 4009 |
| MabI | ACCWGGT | 1 cut(s) | 3988 |
| MfeI | CAATTG | 1 cut(s) | 4157 |
| MflI | RGATCY | 5 cut(s) | 217, 406, 2458, 4130, 4179 |
| MhlI | GDGCHC | 6 cut(s) | 798, 2117, 3627, 3781, 3835, 4106 |
| MluI | ACGCGT | 1 cut(s) | 2267 |
| MlyI | GAGTC | 7 cut(s) | 74, 872, 1775, 1823, 2523, 2690, 3244 |
| MmeI | TCCRAC | 5 cut(s) | 119, 264, 1026, 2718, 2771 |
| Mph1103I | ATGCAT | 4 cut(s) | 619, 658, 1453, 2922 |
| MroXI | GAANNNNTTC | 2 cut(s) | 768, 1887 |
| MslI | CAYNNNNRTG | 9 cut(s) | 10, 456, 1663, 1851, 2183, 2735, 2838, 3068, 3786 |
| MspA1I | CMGCKG | 1 cut(s) | 3929 |
| MspCI | CTTAAG | 1 cut(s) | 172 |
| MspI | CCGG | 5 cut(s) | 1564, 1648, 3752, 4192, 4451 |
| MspR9I | CCNGG | 8 cut(s) | 592, 701, 1128, 1565, 1649, 2562, 3990, 4099 |
| MunI | CAATTG | 1 cut(s) | 4157 |
| Mva1269I | GAATGC | 4 cut(s) | 718, 926, 1169, 1621 |
| MvaI | CCWGG | 6 cut(s) | 592, 701, 1128, 2562, 3990, 4099 |
| MvnI | CGCG | 8 cut(s) | 800, 990, 1021, 1023, 1924, 2269, 3929, 4206 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 254, 827, 935, 1155, 3413, 4028, 4169 |
| NciI | CCSGG | 2 cut(s) | 1565, 1649 |
| NcoI | CCATGG | 1 cut(s) | 252 |
| NlaIV | GGNNCC | 9 cut(s) | 796, 1256, 1270, 1731, 1744, 2990, 3624, 3625, 4190 |
| NmeAIII | GCCGAG | 1 cut(s) | 4165 |
| NruI | TCGCGA | 1 cut(s) | 1924 |
| NsiI | ATGCAT | 4 cut(s) | 619, 658, 1453, 2922 |
| NspI | RCATGY | 6 cut(s) | 455, 1673, 2332, 2837, 2924, 2981 |
| NspV | TTCGAA | 1 cut(s) | 1173 |
| OliI | CACNNNNGTG | 2 cut(s) | 1663, 2735 |
| PaeI | GCATGC | 2 cut(s) | 1673, 2981 |
| PaeR7I | CTCGAG | 1 cut(s) | 582 |
| PciI | ACATGT | 2 cut(s) | 451, 2328 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 580, 2155, 3943 |
| PctI | GAATGC | 4 cut(s) | 718, 926, 1169, 1621 |
| PdmI | GAANNNNTTC | 2 cut(s) | 768, 1887 |
| PfeI | GAWTC | 6 cut(s) | 514, 1101, 2819, 2933, 3464, 3668 |
| PflFI | GACNNNGTC | 3 cut(s) | 29, 4250, 4494 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2998, 3255 |
| PfoI | TCCNGGA | 1 cut(s) | 4097 |
| PleI | GAGTC | 7 cut(s) | 73, 871, 1774, 1822, 2523, 2690, 3243 |
| PmaCI | CACGTG | 1 cut(s) | 953 |
| PmlI | CACGTG | 1 cut(s) | 953 |
| PpsI | GAGTC | 7 cut(s) | 73, 871, 1774, 1822, 2523, 2690, 3243 |
| Ppu21I | YACGTR | 2 cut(s) | 953, 1427 |
| PpuMI | RGGWCCY | 1 cut(s) | 1537 |
| PscI | ACATGT | 2 cut(s) | 451, 2328 |
| PshBI | ATTAAT | 1 cut(s) | 528 |
| PsiI | TTATAA | 2 cut(s) | 114, 3183 |
| Psp124BI | GAGCTC | 1 cut(s) | 4106 |
| Psp1406I | AACGTT | 1 cut(s) | 3382 |
| Psp5II | RGGWCCY | 1 cut(s) | 1537 |
| Psp6I | CCWGG | 6 cut(s) | 590, 699, 1126, 2560, 3988, 4097 |
| PspCI | CACGTG | 1 cut(s) | 953 |
| PspEI | GGTNACC | 4 cut(s) | 1682, 1794, 2564, 4034 |
| PspFI | CCCAGC | 1 cut(s) | 740 |
| PspGI | CCWGG | 6 cut(s) | 590, 699, 1126, 2560, 3988, 4097 |
| PspN4I | GGNNCC | 9 cut(s) | 796, 1256, 1270, 1731, 1744, 2990, 3624, 3625, 4190 |
| PspOMI | GGGCCC | 2 cut(s) | 794, 3623 |
| PspPPI | RGGWCCY | 1 cut(s) | 1537 |
| PspXI | VCTCGAGB | 1 cut(s) | 582 |
| PsuI | RGATCY | 5 cut(s) | 217, 406, 2458, 4130, 4179 |
| PsyI | GACNNNGTC | 3 cut(s) | 29, 4250, 4494 |
| RruI | TCGCGA | 1 cut(s) | 1924 |
| RsaI | GTAC | 7 cut(s) | 485, 1589, 1731, 2426, 3118, 3654, 3842 |
| RsaNI | GTAC | 7 cut(s) | 484, 1588, 1730, 2425, 3117, 3653, 3841 |
| RseI | CAYNNNNRTG | 9 cut(s) | 10, 456, 1663, 1851, 2183, 2735, 2838, 3068, 3786 |
| SacI | GAGCTC | 1 cut(s) | 4106 |
| SacII | CCGCGG | 1 cut(s) | 3930 |
| SchI | GAGTC | 7 cut(s) | 74, 872, 1775, 1823, 2523, 2690, 3244 |
| ScrFI | CCNGG | 8 cut(s) | 592, 701, 1128, 1565, 1649, 2562, 3990, 4099 |
| SduI | GDGCHC | 6 cut(s) | 798, 2117, 3627, 3781, 3835, 4106 |
| SexAI | ACCWGGT | 1 cut(s) | 3988 |
| SfaNI | GCATC | 7 cut(s) | 626, 1460, 2215, 3721, 3811, 3985, 4009 |
| SfcI | CTRYAG | 3 cut(s) | 3120, 3478, 3836 |
| Sfr274I | CTCGAG | 1 cut(s) | 582 |
| Sfr303I | CCGCGG | 1 cut(s) | 3930 |
| SfuI | TTCGAA | 1 cut(s) | 1173 |
| SgrBI | CCGCGG | 1 cut(s) | 3930 |
| SinI | GGWCC | 4 cut(s) | 354, 1537, 3001, 4381 |
| SlaI | CTCGAG | 1 cut(s) | 582 |
| SmiMI | CAYNNNNRTG | 9 cut(s) | 10, 456, 1663, 1851, 2183, 2735, 2838, 3068, 3786 |
| SmlI | CTYRAG | 5 cut(s) | 172, 582, 602, 860, 4126 |
| SmoI | CTYRAG | 5 cut(s) | 172, 582, 602, 860, 4126 |
| SphI | GCATGC | 2 cut(s) | 1673, 2981 |
| SspI | AATATT | 1 cut(s) | 1807 |
| SstI | GAGCTC | 1 cut(s) | 4106 |
| StyD4I | CCNGG | 8 cut(s) | 590, 699, 1126, 1563, 1647, 2560, 3988, 4097 |
| StyI | CCWWGG | 4 cut(s) | 252, 1063, 2360, 3410 |
| TaqII | GACCGA | 1 cut(s) | 1113 |
| TauI | GCSGC | 3 cut(s) | 993, 1182, 3929 |
| TfiI | GAWTC | 6 cut(s) | 514, 1101, 2819, 2933, 3464, 3668 |
| TseI | GCWGC | 8 cut(s) | 499, 821, 871, 1013, 1054, 2084, 4172, 4351 |
| TspGWI | ACGGA | 4 cut(s) | 896, 1564, 2671, 3168 |
| Tth111I | GACNNNGTC | 3 cut(s) | 29, 4250, 4494 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2998, 3255 |
| Vha464I | CTTAAG | 1 cut(s) | 172 |
| VpaK11BI | GGWCC | 4 cut(s) | 354, 1537, 3001, 4381 |
| VspI | ATTAAT | 1 cut(s) | 528 |
| XapI | RAATTY | 8 cut(s) | 381, 636, 1706, 1826, 1971, 2300, 3722, 4430 |
| XbaI | TCTAGA | 1 cut(s) | 190 |
| XceI | RCATGY | 6 cut(s) | 455, 1673, 2332, 2837, 2924, 2981 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2214 |
| XhoI | CTCGAG | 1 cut(s) | 582 |
| XmaJI | CCTAGG | 1 cut(s) | 3410 |
| XmiI | GTMKAC | 1 cut(s) | 3492 |
| XmnI | GAANNNNTTC | 2 cut(s) | 768, 1887 |
| ZraI | GACGTC | 1 cut(s) | 1212 |
| Zsp2I | ATGCAT | 4 cut(s) | 619, 658, 1453, 2922 |