Mitochondrial protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_2 | PF07727 | 11 - 92 | 2e-15 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 177 |
| AclWI | GGATC | 1 cut(s) | 327 |
| AfaI | GTAC | 2 cut(s) | 359, 485 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 316 |
| AgsI | TTSAA | 3 cut(s) | 13, 229, 479 |
| AluBI | AGCT | 2 cut(s) | 241, 289 |
| AluI | AGCT | 2 cut(s) | 241, 289 |
| AlwI | GGATC | 1 cut(s) | 327 |
| AsuHPI | GGTGA | 2 cut(s) | 194, 414 |
| BanII | GRGCYC | 1 cut(s) | 143 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 64, 96 |
| BccI | CCATC | 1 cut(s) | 296 |
| BclI | TGATCA | 2 cut(s) | 63, 184 |
| BfaI | CTAG | 1 cut(s) | 252 |
| BmsI | GCATC | 2 cut(s) | 33, 202 |
| BpuEI | CTTGAG | 1 cut(s) | 441 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 316 |
| Bse1I | ACTGG | 1 cut(s) | 310 |
| BseGI | GGATG | 1 cut(s) | 58 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 316 |
| BseNI | ACTGG | 1 cut(s) | 310 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 316 |
| Bsp1286I | GDGCHC | 1 cut(s) | 143 |
| Bsp143I | GATC | 3 cut(s) | 63, 184, 319 |
| BspPI | GGATC | 1 cut(s) | 327 |
| BsrI | ACTGG | 1 cut(s) | 310 |
| BssMI | GATC | 3 cut(s) | 63, 184, 319 |
| Bst4CI | ACNGT | 1 cut(s) | 357 |
| Bst6I | CTCTTC | 1 cut(s) | 85 |
| BstDEI | CTNAG | 1 cut(s) | 290 |
| BstF5I | GGATG | 1 cut(s) | 58 |
| BstKTI | GATC | 3 cut(s) | 66, 187, 322 |
| BstMBI | GATC | 3 cut(s) | 63, 184, 319 |
| BstX2I | RGATCY | 1 cut(s) | 319 |
| BstYI | RGATCY | 1 cut(s) | 319 |
| BtsCI | GGATG | 1 cut(s) | 58 |
| Csp6I | GTAC | 2 cut(s) | 358, 484 |
| CviAII | CATG | 2 cut(s) | 245, 415 |
| CviJI | RGCY | 5 cut(s) | 141, 170, 241, 289, 350 |
| CviKI_1 | RGCY | 5 cut(s) | 141, 170, 241, 289, 350 |
| CviQI | GTAC | 2 cut(s) | 358, 484 |
| DdeI | CTNAG | 1 cut(s) | 290 |
| DpnI | GATC | 3 cut(s) | 65, 186, 321 |
| DpnII | GATC | 3 cut(s) | 63, 184, 319 |
| Eam1104I | CTCTTC | 1 cut(s) | 85 |
| EarI | CTCTTC | 1 cut(s) | 85 |
| Eco24I | GRGCYC | 1 cut(s) | 143 |
| EcoT38I | GRGCYC | 1 cut(s) | 143 |
| FaeI | CATG | 2 cut(s) | 248, 418 |
| FatI | CATG | 2 cut(s) | 244, 414 |
| FbaI | TGATCA | 2 cut(s) | 63, 184 |
| FokI | GGATG | 1 cut(s) | 65 |
| FriOI | GRGCYC | 1 cut(s) | 143 |
| FspBI | CTAG | 1 cut(s) | 252 |
| Hin1II | CATG | 2 cut(s) | 248, 418 |
| HindIII | AAGCTT | 1 cut(s) | 287 |
| HinfI | GANTC | 3 cut(s) | 248, 454, 463 |
| HphI | GGTGA | 2 cut(s) | 194, 414 |
| Hpy166II | GTNNAC | 2 cut(s) | 6, 484 |
| Hpy188I | TCNGA | 2 cut(s) | 198, 328 |
| Hpy188III | TCNNGA | 4 cut(s) | 252, 279, 451, 458 |
| Hpy8I | GTNNAC | 2 cut(s) | 6, 484 |
| HpyCH4III | ACNGT | 1 cut(s) | 357 |
| HpyCH4V | TGCA | 2 cut(s) | 193, 418 |
| HpyF3I | CTNAG | 1 cut(s) | 290 |
| Hsp92II | CATG | 2 cut(s) | 248, 418 |
| Ksp22I | TGATCA | 2 cut(s) | 63, 184 |
| Kzo9I | GATC | 3 cut(s) | 63, 184, 319 |
| LmnI | GCTCC | 1 cut(s) | 246 |
| LpnPI | CCDG | 3 cut(s) | 264, 282, 323 |
| LweI | GCATC | 2 cut(s) | 33, 202 |
| MaeI | CTAG | 1 cut(s) | 252 |
| MaeIII | GTNAC | 1 cut(s) | 71 |
| MalI | GATC | 3 cut(s) | 65, 186, 321 |
| MboI | GATC | 3 cut(s) | 63, 184, 319 |
| MboII | GAAGA | 2 cut(s) | 29, 72 |
| MflI | RGATCY | 1 cut(s) | 319 |
| MhlI | GDGCHC | 1 cut(s) | 143 |
| MluCI | AATT | 1 cut(s) | 410 |
| MlyI | GAGTC | 1 cut(s) | 448 |
| MnlI | CCTC | 5 cut(s) | 14, 107, 310, 340, 371 |
| MseI | TTAA | 1 cut(s) | 490 |
| MslI | CAYNNNNRTG | 1 cut(s) | 47 |
| NdeII | GATC | 3 cut(s) | 63, 184, 319 |
| NlaIII | CATG | 2 cut(s) | 248, 418 |
| PfeI | GAWTC | 2 cut(s) | 248, 463 |
| PleI | GAGTC | 1 cut(s) | 448 |
| PpsI | GAGTC | 1 cut(s) | 448 |
| PsiI | TTATAA | 1 cut(s) | 177 |
| PsuI | RGATCY | 1 cut(s) | 319 |
| RsaI | GTAC | 2 cut(s) | 359, 485 |
| RsaNI | GTAC | 2 cut(s) | 358, 484 |
| RseI | CAYNNNNRTG | 1 cut(s) | 47 |
| SaqAI | TTAA | 1 cut(s) | 490 |
| Sau3AI | GATC | 3 cut(s) | 63, 184, 319 |
| SchI | GAGTC | 1 cut(s) | 448 |
| SduI | GDGCHC | 1 cut(s) | 143 |
| SetI | ASST | 5 cut(s) | 99, 243, 259, 291, 363 |
| SfaNI | GCATC | 2 cut(s) | 33, 202 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 47 |
| SmlI | CTYRAG | 1 cut(s) | 456 |
| SmoI | CTYRAG | 1 cut(s) | 456 |
| Sse9I | AATT | 1 cut(s) | 410 |
| SspI | AATATT | 1 cut(s) | 382 |
| SspMI | CTAG | 1 cut(s) | 252 |
| TaaI | ACNGT | 1 cut(s) | 357 |
| TaqI | TCGA | 1 cut(s) | 334 |
| TasI | AATT | 1 cut(s) | 410 |
| TfiI | GAWTC | 2 cut(s) | 248, 463 |
| Tru1I | TTAA | 1 cut(s) | 490 |
| Tru9I | TTAA | 1 cut(s) | 490 |
| TspDTI | ATGAA | 5 cut(s) | 92, 137, 143, 403, 425 |
| XbaI | TCTAGA | 1 cut(s) | 251 |
| XspI | CTAG | 1 cut(s) | 252 |