pycom05g12390

protein serine/threonine kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0000889
Physical Location & Seq
Forward (+)
15865219 .. 15866115
897 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g12390.2

Sequence Viewer

Length: 396 bp
ATGAAAGATTTGGGACCCCTCCATTTTTTCTTGGGTCTTGAAGCAACTCGTGGAGCTGATGGGTTACATCTAAAGCAGACAAAATATGTTCTCGATTTGTTGCAGCATGTAGATATGTTGGACGCCAAGCCTTGTGCTACTCCAGCTCAATCTAGCTCCCCACTTCATTCTCTTGATGGTGTTCCCTTGCCTAATCCTACCAGCTACCGCAGTGTGGTCGGTGCTCTGCAATACTTAACCATCACCAGACCTGACATCACGTATGCAGTAAATCAGATTGCAGACATATTCACCAAGGGCTTATCTGCTGATCGTTTTCATTTCTTAAAGTCCAAGCTCGTTCGTCGTCTGCTCATGAGCTTGCGGGGGGATGATGAAGCTAATGCTGTCCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

132

Amino Acids

14.45

Weight (kDa)

7.93

Isoelectric Point (pI)

31.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 208, 364
AcyI GRCGYC 1 cut(s) 123
AfiI CCNNNNNNNGG 1 cut(s) 214
AgsI TTSAA 1 cut(s) 41
AluBI AGCT 7 cut(s) 56, 146, 156, 204, 337, 360, 380
AluI AGCT 7 cut(s) 56, 146, 156, 204, 337, 360, 380
Alw21I GWGCWC 1 cut(s) 226
ApeKI GCWGC 1 cut(s) 103
AspS9I GGNCC 1 cut(s) 14
AsuHPI GGTGA 2 cut(s) 235, 283
AvaII GGWCC 1 cut(s) 14
BauI CACGAG 1 cut(s) 48
Bbv12I GWGCWC 1 cut(s) 226
BbvI GCAGC 1 cut(s) 115
BccI CCATC 3 cut(s) 53, 170, 248
BcgI CGANNNNNNTGC 2 cut(s) 199, 233
BfaI CTAG 1 cut(s) 153
BisI GCNGC 1 cut(s) 104
BlsI GCNGC 1 cut(s) 105
Bme18I GGWCC 1 cut(s) 14
BmgT120I GGNCC 1 cut(s) 14
BmiI GGNNCC 2 cut(s) 15, 16
BpmI CTGGAG 1 cut(s) 126
BsaAI YACGTR 1 cut(s) 261
BsaHI GRCGYC 1 cut(s) 123
BsaJI CCNNGG 1 cut(s) 294
Bsc4I CCNNNNNNNGG 1 cut(s) 214
BseDI CCNNGG 1 cut(s) 294
BseGI GGATG 1 cut(s) 376
BseLI CCNNNNNNNGG 1 cut(s) 214
BseXI GCAGC 1 cut(s) 115
BsiHKAI GWGCWC 1 cut(s) 226
BslFI GGGAC 1 cut(s) 27
BslI CCNNNNNNNGG 1 cut(s) 214
BsmFI GGGAC 1 cut(s) 27
Bsp1286I GDGCHC 1 cut(s) 226
Bsp143I GATC 1 cut(s) 310
BspACI CCGC 2 cut(s) 208, 364
BspHI TCATGA 1 cut(s) 354
BspLI GGNNCC 2 cut(s) 15, 16
BssECI CCNNGG 1 cut(s) 294
BssMI GATC 1 cut(s) 310
BssNI GRCGYC 1 cut(s) 123
BssSI CACGAG 1 cut(s) 48
BssT1I CCWWGG 1 cut(s) 294
Bst2BI CACGAG 1 cut(s) 48
BstACI GRCGYC 1 cut(s) 123
BstBAI YACGTR 1 cut(s) 261
BstC8I GCNNGC 1 cut(s) 362
BstF5I GGATG 1 cut(s) 376
BstKTI GATC 1 cut(s) 313
BstMBI GATC 1 cut(s) 310
BstMWI GCNNNNNNNGC 1 cut(s) 143
BstNSI RCATGY 1 cut(s) 110
BstV1I GCAGC 1 cut(s) 115
BtsCI GGATG 1 cut(s) 376
BtsI GCAGTG 1 cut(s) 217
BtsIMutI CAGTG 1 cut(s) 217
Cac8I GCNNGC 1 cut(s) 362
CciI TCATGA 1 cut(s) 354
Cfr13I GGNCC 1 cut(s) 14
CseI GACGC 1 cut(s) 131
CviAII CATG 2 cut(s) 107, 355
CviJI RGCY 9 cut(s) 56, 130, 146, 156, 204, 300, 337, 360, 380
CviKI_1 RGCY 9 cut(s) 56, 130, 146, 156, 204, 300, 337, 360, 380
DpnI GATC 1 cut(s) 312
DpnII GATC 1 cut(s) 310
Eco130I CCWWGG 1 cut(s) 294
Eco47I GGWCC 1 cut(s) 14
EcoO109I RGGNCCY 1 cut(s) 14
EcoT14I CCWWGG 1 cut(s) 294
ErhI CCWWGG 1 cut(s) 294
FaeI CATG 2 cut(s) 110, 358
FaiI YATR 6 cut(s) 87, 108, 116, 264, 287, 356
FaqI GGGAC 1 cut(s) 27
FatI CATG 2 cut(s) 106, 354
FauI CCCGC 1 cut(s) 357
Fnu4HI GCNGC 1 cut(s) 104
FokI GGATG 1 cut(s) 383
Fsp4HI GCNGC 1 cut(s) 104
FspBI CTAG 1 cut(s) 153
GluI GCNGC 1 cut(s) 104
GsuI CTGGAG 1 cut(s) 126
HgaI GACGC 1 cut(s) 131
Hin1I GRCGYC 1 cut(s) 123
Hin1II CATG 2 cut(s) 110, 358
HphI GGTGA 2 cut(s) 235, 283
Hpy166II GTNNAC 1 cut(s) 391
Hpy188I TCNGA 1 cut(s) 276
Hpy188III TCNNGA 4 cut(s) 38, 92, 173, 355
Hpy8I GTNNAC 1 cut(s) 391
Hpy99I CGWCG 1 cut(s) 348
HpyCH4IV ACGT 1 cut(s) 260
HpyCH4V TGCA 4 cut(s) 103, 229, 266, 281
HpyF10VI GCNNNNNNNGC 1 cut(s) 143
HpySE526I ACGT 1 cut(s) 260
Hsp92I GRCGYC 1 cut(s) 123
Hsp92II CATG 2 cut(s) 110, 358
KflI GGGWCCC 1 cut(s) 14
Kzo9I GATC 1 cut(s) 310
LmnI GCTCC 2 cut(s) 53, 161
LpnPI CCDG 4 cut(s) 156, 214, 259, 264
Lsp1109I GCAGC 1 cut(s) 115
MaeI CTAG 1 cut(s) 153
MaeII ACGT 1 cut(s) 260
MaeIII GTNAC 1 cut(s) 63
MalI GATC 1 cut(s) 312
MboI GATC 1 cut(s) 310
MhlI GDGCHC 1 cut(s) 226
MmeI TCCRAC 1 cut(s) 99
MnlI CCTC 1 cut(s) 29
MseI TTAA 2 cut(s) 236, 326
MwoI GCNNNNNNNGC 1 cut(s) 143
NdeII GATC 1 cut(s) 310
NlaIII CATG 2 cut(s) 110, 358
NlaIV GGNNCC 2 cut(s) 15, 16
NspI RCATGY 1 cut(s) 110
PagI TCATGA 1 cut(s) 354
PkrI GCNGC 1 cut(s) 105
Ppu21I YACGTR 1 cut(s) 261
PpuMI RGGWCCY 1 cut(s) 14
Psp5II RGGWCCY 1 cut(s) 14
PspN4I GGNNCC 2 cut(s) 15, 16
PspPI GGNCC 1 cut(s) 14
PspPPI RGGWCCY 1 cut(s) 14
SaqAI TTAA 2 cut(s) 236, 326
SatI GCNGC 1 cut(s) 104
Sau3AI GATC 1 cut(s) 310
Sau96I GGNCC 1 cut(s) 14
SduI GDGCHC 1 cut(s) 226
SetI ASST 9 cut(s) 58, 148, 158, 206, 253, 263, 339, 362, 382
SinI GGWCC 1 cut(s) 14
SsiI CCGC 2 cut(s) 208, 364
SspMI CTAG 1 cut(s) 153
StyI CCWWGG 1 cut(s) 294
TaiI ACGT 1 cut(s) 263
TaqI TCGA 1 cut(s) 93
Tru1I TTAA 2 cut(s) 236, 326
Tru9I TTAA 2 cut(s) 236, 326
TscAI CASTG 1 cut(s) 217
TseI GCWGC 1 cut(s) 103
TspDTI ATGAA 4 cut(s) 17, 155, 308, 390
TspRI CASTG 1 cut(s) 217
VpaK11BI GGWCC 1 cut(s) 14
XceI RCATGY 1 cut(s) 110
XspI CTAG 1 cut(s) 153
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.