MD09G1214100.v1.1

3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0000889
Physical Location & Seq
Forward (+)
21039657 .. 21044071
4415 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1214100.v1.1.491

Sequence Viewer

Length: 2178 bp
ATGAAAAAGAAAATTACGGAGTTGTCTATGGCTCGCCGCAAGGCTGCTATTTCCTCATCTGCAACTGAACCTTTTCAGGCCTTCTCAGTGCAATCTCAGCCTCCCTTGCTTCCTACTCCATCTGTTTTTGCTGCTCAGAATCAACCATTTCACTCTACTTTCCGATTTAACTCAAATCGTGGTAAGCCAGCTCGAGGTAATTTCTCCTCTAATCGCAGCAATCGCAATTTTCATAATAATAGGGGCACTTTCACCAACAATCGTGGCAATCGCAATTATCAAGGTTCTTCTACTTTCAAAGTTCCTTGTCAGATTTGTGGTTCTACCAGTCACGAGGCAATTGACTGCTTTGATCGTATGAATCCGGATATCTGCGGTCGAATTCCTCCAGCCAAACTTGCTGCAATGTGTGTGCATCATTCAGCAAAATCGGCTCAGCCTTGGTTAATTGATTCTGGCGCCACCTCCCACATCACCAATGATGTAGCCAATATTTCTTCTCCAACTCCTTACACTAGAGAGGACAAAGTGTACATTGGAGATGGTAAAGGATTATCTATCCATCATATTGGTTCCTCATCTTTGCACACTCCTCATTCTTCCTTTAAACTGAGCAATGTTTTACATGTTCTTTTCATGAAACATAATCTCTTATCTGCTTATCAGTTTCTTAAGGATAATAACTGTTCATTGACTTTTGACCCTTATGGATCCATTGTCAAGGATCGCATTTCGGGGAAGATGTTTTTGCAAGGACCTGTTAGGGATGGTTTCTATCCTCTCAACAGTTCCACCAGTTCTTCTTCTTCACCTTCAGTGTTTTTCAGCATTCAAACACCAGTCATTGTATGGCACAAGCTCCTCGGACATCCTTCCTCCTCAATTTTTCGAAGAGTCATATCTACTAATAATCTTGCACTACAAGGCAAGAAGATTGTTGATTTTTTCTGCTCAGATTGTGCACTTGCTAAGAACCACAAGCTTCCTTTTGGAGTGGCTTCTTCATCAACAACTCACAGTCTCAAACTTCTGCATTGTGATATGTGGGGACCTGCCTCTGTAACATCTAATAGTGGCTTCAAGTATTATCTACTTCTTGTTGATGATTTTAGCAAGTACAGTTGGTTTTTTCCATTGAAGTCTAAGTCCGATGTATTTTCTACATTTGTTACTTTCAAAACCTATGTAAAAAACTTCACTAGCAATAAAATCAAGATTCTGCGTTCAGATTCAATGGGTGAACTTACTAGTCACTCTTTTACTTCATTTCTTCGTGATCATGGTATATTGCATCAATTTAGTTGTCCACATACGCCTGAACAAAATGGCTGTGCAGAGAGAAATCACAGACATCTTGTTGAGACAGCTCGCACATTACTTGTAGCTTCTCAAGTTCCTCAGGTTTTTTGGGTTGAAGCCTTCTCCACTGCAATATATCTTATAAATCGACTTCCTATTTCTGGTCTTACAAAGTCACCGTGGGAACTTCTTTTCCACCATCATCCAGATTACTCTAAACTGAAAGTATTTGGCTGTCAATGCTATCCCTGGCTTAAATCGTACATTCACAGCAAATTGGATGCTAAGAGCAAAAGTTGTGTGTTTTTTAGCTATAGTCTTCAACATAAAGGCTATAGATGTCTTGATCCCGTCACTAATAGAATTTACATATCAAGACATGTTGTCTTTGATGAAACAACTTATCCTTTTACATCATTGCCGCCCAACAGTCCCACTTCAGAGATTTCATTTTCTACACCATCTCCATCCTTTGACCTTAAATTCAGCAAACATTTTTCTAGTTATCCTCCAGTCAGTACCTATTCAGCACCACAGTGTTCTTCTGTACCTCATCCTGTCAATCGGATTACATCTTCCAATGAAACTTCTTTCTGTAATCAGTCAGTGGATAATTCTCACACTTCTTCCAGCTCTGCCTCTTTCAATGACTCATCTCTCTTACCTATTCAGCCTAGTAATCCACCTATTTCTGGGAATACACATCCTATGATTACAAGATCTAAGCATACTCTGACGTTGATTGGGCTGGCTGCACCTTTGATAGGCGGTCAACCAGTGGATATTGTGTATTTCTTAGTCAAAATCTTGTCAGTTGGAGTGCAAAGAAACAAAGCACTGTTGCTCGTTCCTCCACATAAGCTGTATATCGTTCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000137 GO:0000139 GO:0000295 GO:0003674 GO:0005215 GO:0005346 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005794 GO:0005795 GO:0006029 GO:0006082 GO:0006139 GO:0006163 GO:0006164 GO:0006725 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006820 GO:0006862 GO:0008150 GO:0008152 GO:0008509 GO:0008514 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009259 GO:0009260 GO:0009987 GO:0012505 GO:0015012 GO:0015075 GO:0015215 GO:0015216 GO:0015605 GO:0015711 GO:0015748 GO:0015865 GO:0015868 GO:0015931 GO:0015932 GO:0016020 GO:0016021 GO:0018130 GO:0019438 GO:0019538 GO:0019637 GO:0019693 GO:0022857 GO:0030166 GO:0030173 GO:0030176 GO:0030201 GO:0031090 GO:0031224 GO:0031227 GO:0031228 GO:0031300 GO:0031301 GO:0031984 GO:0031985 GO:0033865 GO:0033866 GO:0033875 GO:0034030 GO:0034032 GO:0034033 GO:0034035 GO:0034036 GO:0034220 GO:0034641 GO:0034645 GO:0034654 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044272 GO:0044281 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046390 GO:0046483 GO:0046963 GO:0046964 GO:0050427 GO:0050428 GO:0051179 GO:0051234 GO:0051503 GO:0055085 GO:0055086 GO:0071702 GO:0071704 GO:0071705 GO:0072348 GO:0072521 GO:0072522 GO:0072530 GO:0090407 GO:0098588 GO:0098656 GO:0098791 GO:0098827 GO:1901135 GO:1901137 GO:1901264 GO:1901293 GO:1901360 GO:1901362 GO:1901505 GO:1901564 GO:1901566 GO:1901576 GO:1901679 GO:1901682 GO:1902559
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UAA

Protein Analysis

726

Amino Acids

80.72

Weight (kDa)

9.57

Isoelectric Point (pI)

40.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pol_BBD PF22936 148 - 225 2.2e-13 Pol polyprotein, beta-barrel domain
gag_pre-integrs PF13976 257 - 324 1e-09 GAG-pre-integrase domain
rve PF00665 340 - 439 2.4e-12 Integrase core domain
SH3_retrovirus PF25597 512 - 573 7.7e-23 Retroviral polymerase SH3-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1442
Acc36I ACCTGC 1 cut(s) 1060
AccB1I GGYRCC 1 cut(s) 458
AccIII TCCGGA 1 cut(s) 364
AciI CCGC 4 cut(s) 37, 375, 1721, 2067
AclWI GGATC 4 cut(s) 705, 718, 732, 1640
AcsI RAATTY 3 cut(s) 381, 1662, 1781
AcuI CTGAAG 2 cut(s) 798, 1722
AcyI GRCGYC 1 cut(s) 459
AfaI GTAC 5 cut(s) 533, 1118, 1562, 1819, 1848
AfiI CCNNNNNNNGG 4 cut(s) 194, 1460, 1991, 2063
AflII CTTAAG 1 cut(s) 671
AflIII ACRYGT 2 cut(s) 625, 1678
AgsI TTSAA 9 cut(s) 298, 833, 1081, 1138, 1177, 1233, 1415, 1622, 1945
AhdI GACNNNNNGTC 1 cut(s) 1682
AhlI ACTAGT 1 cut(s) 1247
AjnI CCWGG 1 cut(s) 1547
AleI CACNNNNGTG 1 cut(s) 1834
AloI GAACNNNNNNTCC 2 cut(s) 1476, 1508
AluBI AGCT 8 cut(s) 191, 859, 982, 1367, 1385, 1611, 1932, 2161
AluI AGCT 8 cut(s) 191, 859, 982, 1367, 1385, 1611, 1932, 2161
Alw21I GWGCWC 1 cut(s) 964
Alw26I GTCTC 2 cut(s) 1025, 1355
Alw44I GTGCAC 1 cut(s) 960
AlwI GGATC 4 cut(s) 705, 718, 732, 1640
Ama87I CYCGRG 1 cut(s) 192
Aor13HI TCCGGA 1 cut(s) 364
AoxI GGCC 1 cut(s) 78
ApaLI GTGCAC 1 cut(s) 960
ApeKI GCWGC 5 cut(s) 44, 131, 216, 401, 2051
ApoI RAATTY 3 cut(s) 381, 1662, 1781
Asp700I GAANNNNTTC 1 cut(s) 72
AspLEI GCGC 1 cut(s) 461
AspS9I GGNCC 2 cut(s) 755, 1049
AsuHPI GGTGA 5 cut(s) 244, 466, 801, 1250, 1467
AsuII TTCGAA 1 cut(s) 889
AvaI CYCGRG 1 cut(s) 192
AvaII GGWCC 2 cut(s) 755, 1049
AxyI CCTNAGG 1 cut(s) 1398
BaeGI GKGCMC 2 cut(s) 248, 964
BamHI GGATCC 1 cut(s) 710
BanI GGYRCC 1 cut(s) 458
BauI CACGAG 1 cut(s) 332
BbsI GAAGAC 1 cut(s) 1610
Bbv12I GWGCWC 1 cut(s) 964
BbvI GCAGC 5 cut(s) 31, 118, 228, 388, 2038
BccI CCATC 7 cut(s) 127, 536, 570, 761, 1506, 1768, 1774
BciT130I CCWGG 1 cut(s) 1549
BclI TGATCA 1 cut(s) 1276
BcoDI GTCTC 2 cut(s) 1025, 1355
BcuI ACTAGT 1 cut(s) 1247
BfaI CTAG 5 cut(s) 516, 1200, 1248, 1800, 1974
BfmI CTRYAG 2 cut(s) 1612, 1633
BfoI RGCGCY 1 cut(s) 462
BfrI CTTAAG 1 cut(s) 671
BfuAI ACCTGC 1 cut(s) 1060
BglII AGATCT 1 cut(s) 2018
BisI GCNGC 7 cut(s) 37, 45, 132, 217, 402, 1721, 2052
BlpI GCTNAGC 1 cut(s) 435
BlsI GCNGC 7 cut(s) 38, 46, 133, 218, 403, 1722, 2053
Bme1390I CCNGG 1 cut(s) 1549
Bme18I GGWCC 2 cut(s) 755, 1049
BmeRI GACNNNNNGTC 1 cut(s) 1682
BmeT110I CYCGRG 1 cut(s) 192
BmgT120I GGNCC 2 cut(s) 755, 1049
BmiI GGNNCC 4 cut(s) 460, 574, 712, 1050
BmrFI CCNGG 1 cut(s) 1549
BmsI GCATC 3 cut(s) 424, 1300, 1570
BpiI GAAGAC 1 cut(s) 1610
BpmI CTGGAG 2 cut(s) 372, 1794
Bpu1102I GCTNAGC 1 cut(s) 435
Bpu14I TTCGAA 1 cut(s) 889
BpuEI CTTGAG 1 cut(s) 1374
BsaHI GRCGYC 1 cut(s) 459
BsaJI CCNNGG 4 cut(s) 440, 862, 1478, 1547
BsaWI WCCGGW 1 cut(s) 364
BsaXI ACNNNNNCTCC 2 cut(s) 1747, 1777
Bsc4I CCNNNNNNNGG 4 cut(s) 194, 1460, 1991, 2063
Bse1I ACTGG 5 cut(s) 327, 795, 839, 1811, 2075
Bse21I CCTNAGG 1 cut(s) 1398
Bse3DI GCAATG 3 cut(s) 411, 622, 1715
BseAI TCCGGA 1 cut(s) 364
BseBI CCWGG 1 cut(s) 1549
BseDI CCNNGG 4 cut(s) 440, 862, 1478, 1547
BseGI GGATG 7 cut(s) 772, 868, 1501, 1585, 1766, 1852, 2002
BseLI CCNNNNNNNGG 4 cut(s) 194, 1460, 1991, 2063
BseMI GCAATG 3 cut(s) 411, 622, 1715
BseMII CTCAG 7 cut(s) 99, 110, 149, 449, 602, 966, 1412
BseNI ACTGG 5 cut(s) 327, 795, 839, 1811, 2075
BseRI GAGGAG 4 cut(s) 196, 582, 851, 868
BseSI GKGCMC 2 cut(s) 248, 964
BseXI GCAGC 5 cut(s) 31, 118, 228, 388, 2038
BsgI GTGCAG 2 cut(s) 1353, 2037
Bsh1285I CGRYCG 1 cut(s) 379
BshFI GGCC 1 cut(s) 80
BshNI GGYRCC 1 cut(s) 458
BsiEI CGRYCG 1 cut(s) 379
BsiHKAI GWGCWC 1 cut(s) 964
BsiHKCI CYCGRG 1 cut(s) 192
BsiSI CCGG 1 cut(s) 365
BslFI GGGAC 2 cut(s) 1062, 1716
BslI CCNNNNNNNGG 4 cut(s) 194, 1460, 1991, 2063
BsmAI GTCTC 2 cut(s) 1025, 1355
BsmFI GGGAC 2 cut(s) 1062, 1716
BsmI GAATGC 1 cut(s) 828
BsnI GGCC 1 cut(s) 80
BsoBI CYCGRG 1 cut(s) 192
Bsp119I TTCGAA 1 cut(s) 889
Bsp1286I GDGCHC 2 cut(s) 248, 964
Bsp13I TCCGGA 1 cut(s) 364
Bsp1407I TGTACA 1 cut(s) 531
Bsp143I GATC 6 cut(s) 352, 710, 724, 1276, 1645, 2018
Bsp1720I GCTNAGC 1 cut(s) 435
BspACI CCGC 4 cut(s) 37, 375, 1721, 2067
BspANI GGCC 1 cut(s) 80
BspCNI CTCAG 7 cut(s) 98, 109, 148, 448, 603, 965, 1411
BspEI TCCGGA 1 cut(s) 364
BspHI TCATGA 1 cut(s) 636
BspLI GGNNCC 4 cut(s) 460, 574, 712, 1050
BspMI ACCTGC 1 cut(s) 1060
BspPI GGATC 4 cut(s) 705, 718, 732, 1640
BspT104I TTCGAA 1 cut(s) 889
BspT107I GGYRCC 1 cut(s) 458
BspTI CTTAAG 1 cut(s) 671
BsrDI GCAATG 3 cut(s) 411, 622, 1715
BsrGI TGTACA 1 cut(s) 531
BsrI ACTGG 5 cut(s) 327, 795, 839, 1811, 2075
BssECI CCNNGG 4 cut(s) 440, 862, 1478, 1547
BssMI GATC 6 cut(s) 352, 710, 724, 1276, 1645, 2018
BssNI GRCGYC 1 cut(s) 459
BssSI CACGAG 1 cut(s) 332
BssT1I CCWWGG 1 cut(s) 440
Bst2BI CACGAG 1 cut(s) 332
Bst2UI CCWGG 1 cut(s) 1549
Bst4CI ACNGT 8 cut(s) 686, 788, 1019, 1121, 1479, 1730, 1836, 2139
Bst6I CTCTTC 1 cut(s) 886
BstACI GRCGYC 1 cut(s) 459
BstAFI CTTAAG 1 cut(s) 671
BstAUI TGTACA 1 cut(s) 531
BstBI TTCGAA 1 cut(s) 889
BstC8I GCNNGC 4 cut(s) 34, 189, 1369, 2049
BstDSI CCRYGG 1 cut(s) 1478
BstENI CCTNNNNNAGG 1 cut(s) 2061
BstF5I GGATG 7 cut(s) 772, 868, 1501, 1585, 1766, 1852, 2002
BstH2I RGCGCY 1 cut(s) 462
BstHHI GCGC 1 cut(s) 461
BstKTI GATC 6 cut(s) 355, 713, 727, 1279, 1648, 2021
BstMAI GTCTC 2 cut(s) 1025, 1355
BstMBI GATC 6 cut(s) 352, 710, 724, 1276, 1645, 2018
BstMCI CGRYCG 1 cut(s) 379
BstMWI GCNNNNNNNGC 6 cut(s) 97, 106, 222, 398, 431, 1539
BstNI CCWGG 1 cut(s) 1549
BstNSI RCATGY 2 cut(s) 629, 1682
BstSCI CCNGG 1 cut(s) 1547
BstSFI CTRYAG 2 cut(s) 1612, 1633
BstSLI GKGCMC 2 cut(s) 248, 964
BstV1I GCAGC 5 cut(s) 31, 118, 228, 388, 2038
BstV2I GAAGAC 1 cut(s) 1610
BstX2I RGATCY 2 cut(s) 710, 2018
BstXI CCANNNNNNTGG 1 cut(s) 569
BstYI RGATCY 2 cut(s) 710, 2018
Bsu36I CCTNAGG 1 cut(s) 1398
BsuRI GGCC 1 cut(s) 80
BtgI CCRYGG 1 cut(s) 1478
BtsCI GGATG 7 cut(s) 772, 868, 1501, 1585, 1766, 1852, 2002
BtsI GCAGTG 1 cut(s) 1425
BtsIMutI CAGTG 7 cut(s) 93, 822, 1425, 1841, 1911, 2082, 2135
BveI ACCTGC 1 cut(s) 1060
Cac8I GCNNGC 4 cut(s) 34, 189, 1369, 2049
CciI TCATGA 1 cut(s) 636
CfoI GCGC 1 cut(s) 461
Cfr13I GGNCC 2 cut(s) 755, 1049
Csp6I GTAC 5 cut(s) 532, 1117, 1561, 1818, 1847
CspCI CAANNNNNGTGG 2 cut(s) 244, 279
CviAII CATG 4 cut(s) 626, 637, 1280, 1679
CviQI GTAC 5 cut(s) 532, 1117, 1561, 1818, 1847
DinI GGCGCC 1 cut(s) 460
DpnI GATC 6 cut(s) 354, 712, 726, 1278, 1647, 2020
DpnII GATC 6 cut(s) 352, 710, 724, 1276, 1645, 2018
DraI TTTAAA 1 cut(s) 607
DriI GACNNNNNGTC 1 cut(s) 1682
Eam1104I CTCTTC 1 cut(s) 886
Eam1105I GACNNNNNGTC 1 cut(s) 1682
EarI CTCTTC 1 cut(s) 886
Eco130I CCWWGG 1 cut(s) 440
Eco147I AGGCCT 1 cut(s) 80
Eco32I GATATC 1 cut(s) 370
Eco47I GGWCC 2 cut(s) 755, 1049
Eco57I CTGAAG 2 cut(s) 798, 1722
Eco81I CCTNAGG 1 cut(s) 1398
Eco88I CYCGRG 1 cut(s) 192
EcoNI CCTNNNNNAGG 1 cut(s) 2061
EcoO109I RGGNCCY 2 cut(s) 755, 1049
EcoRI GAATTC 1 cut(s) 381
EcoRII CCWGG 1 cut(s) 1547
EcoRV GATATC 1 cut(s) 370
EcoT14I CCWWGG 1 cut(s) 440
EgeI GGCGCC 1 cut(s) 460
EheI GGCGCC 1 cut(s) 460
ErhI CCWWGG 1 cut(s) 440
FaeI CATG 4 cut(s) 629, 640, 1283, 1682
FaqI GGGAC 2 cut(s) 1062, 1716
FatI CATG 4 cut(s) 625, 636, 1279, 1678
FbaI TGATCA 1 cut(s) 1276
Fnu4HI GCNGC 7 cut(s) 37, 45, 132, 217, 402, 1721, 2052
FokI GGATG 7 cut(s) 779, 855, 1488, 1592, 1753, 1839, 1989
Fsp4HI GCNGC 7 cut(s) 37, 45, 132, 217, 402, 1721, 2052
FspBI CTAG 5 cut(s) 516, 1200, 1248, 1800, 1974
GlaI GCGC 1 cut(s) 460
GluI GCNGC 7 cut(s) 37, 45, 132, 217, 402, 1721, 2052
GsuI CTGGAG 2 cut(s) 372, 1794
HaeII RGCGCY 1 cut(s) 462
HaeIII GGCC 1 cut(s) 80
HapII CCGG 1 cut(s) 365
HhaI GCGC 1 cut(s) 461
Hin1I GRCGYC 1 cut(s) 459
Hin1II CATG 4 cut(s) 629, 640, 1283, 1682
Hin6I GCGC 1 cut(s) 459
HinP1I GCGC 1 cut(s) 459
HincII GTYRAC 1 cut(s) 2072
HindII GTYRAC 1 cut(s) 2072
HindIII AAGCTT 1 cut(s) 980
HinfI GANTC 7 cut(s) 139, 361, 452, 894, 1216, 1229, 1949
HpaII CCGG 1 cut(s) 365
HphI GGTGA 5 cut(s) 244, 466, 801, 1250, 1467
Hpy166II GTNNAC 5 cut(s) 532, 962, 1241, 1307, 2072
Hpy188III TCNNGA 8 cut(s) 332, 365, 637, 1213, 1274, 1505, 1643, 1674
Hpy8I GTNNAC 5 cut(s) 532, 962, 1241, 1307, 2072
HpyAV CCTTC 4 cut(s) 91, 822, 882, 1429
HpyCH4III ACNGT 8 cut(s) 686, 788, 1019, 1121, 1479, 1730, 1836, 2139
HpyCH4IV ACGT 1 cut(s) 2036
HpyF10VI GCNNNNNNNGC 6 cut(s) 97, 106, 222, 398, 431, 1539
HpySE526I ACGT 1 cut(s) 2036
Hsp92I GRCGYC 1 cut(s) 459
Hsp92II CATG 4 cut(s) 629, 640, 1283, 1682
HspAI GCGC 1 cut(s) 459
KasI GGCGCC 1 cut(s) 458
Kpn2I TCCGGA 1 cut(s) 364
Ksp22I TGATCA 1 cut(s) 1276
Kzo9I GATC 6 cut(s) 352, 710, 724, 1276, 1645, 2018
LmnI GCTCC 1 cut(s) 864
Lsp1109I GCAGC 5 cut(s) 31, 118, 228, 388, 2038
LweI GCATC 3 cut(s) 424, 1300, 1570
MaeI CTAG 5 cut(s) 516, 1200, 1248, 1800, 1974
MaeII ACGT 1 cut(s) 2036
MaeIII GTNAC 6 cut(s) 329, 1060, 1168, 1250, 1473, 1651
MalI GATC 6 cut(s) 354, 712, 726, 1278, 1647, 2020
MboI GATC 6 cut(s) 352, 710, 724, 1276, 1645, 2018
MfeI CAATTG 1 cut(s) 339
MflI RGATCY 2 cut(s) 710, 2018
MhlI GDGCHC 2 cut(s) 248, 964
Mly113I GGCGCC 1 cut(s) 459
MlyI GAGTC 2 cut(s) 903, 1943
MmeI TCCRAC 2 cut(s) 527, 2095
MroI TCCGGA 1 cut(s) 364
MroXI GAANNNNTTC 1 cut(s) 72
MseI TTAA 6 cut(s) 168, 446, 606, 672, 1554, 1779
MslI CAYNNNNRTG 1 cut(s) 1834
MspCI CTTAAG 1 cut(s) 671
MspI CCGG 1 cut(s) 365
MspR9I CCNGG 1 cut(s) 1549
MunI CAATTG 1 cut(s) 339
Mva1269I GAATGC 1 cut(s) 828
MvaI CCWGG 1 cut(s) 1549
MwoI GCNNNNNNNGC 6 cut(s) 97, 106, 222, 398, 431, 1539
NarI GGCGCC 1 cut(s) 459
NdeII GATC 6 cut(s) 352, 710, 724, 1276, 1645, 2018
NlaIII CATG 4 cut(s) 629, 640, 1283, 1682
NlaIV GGNNCC 4 cut(s) 460, 574, 712, 1050
NmuCI GTSAC 4 cut(s) 329, 1250, 1473, 1651
NspI RCATGY 2 cut(s) 629, 1682
NspV TTCGAA 1 cut(s) 889
OliI CACNNNNGTG 1 cut(s) 1834
PaeR7I CTCGAG 1 cut(s) 192
PagI TCATGA 1 cut(s) 636
PceI AGGCCT 1 cut(s) 80
PciI ACATGT 2 cut(s) 625, 1678
PctI GAATGC 1 cut(s) 828
PdmI GAANNNNTTC 1 cut(s) 72
PfeI GAWTC 5 cut(s) 139, 361, 452, 1216, 1229
PkrI GCNGC 7 cut(s) 38, 46, 133, 218, 403, 1722, 2053
PleI GAGTC 2 cut(s) 902, 1943
PluTI GGCGCC 1 cut(s) 462
PpsI GAGTC 2 cut(s) 902, 1943
PpuMI RGGWCCY 2 cut(s) 755, 1049
PscI ACATGT 2 cut(s) 625, 1678
PsiI TTATAA 1 cut(s) 1442
Psp5II RGGWCCY 2 cut(s) 755, 1049
Psp6I CCWGG 1 cut(s) 1547
PspGI CCWGG 1 cut(s) 1547
PspN4I GGNNCC 4 cut(s) 460, 574, 712, 1050
PspPI GGNCC 2 cut(s) 755, 1049
PspPPI RGGWCCY 2 cut(s) 755, 1049
PspXI VCTCGAGB 1 cut(s) 192
PsuI RGATCY 2 cut(s) 710, 2018
RsaI GTAC 5 cut(s) 533, 1118, 1562, 1819, 1848
RsaNI GTAC 5 cut(s) 532, 1117, 1561, 1818, 1847
RseI CAYNNNNRTG 1 cut(s) 1834
SaqAI TTAA 6 cut(s) 168, 446, 606, 672, 1554, 1779
SatI GCNGC 7 cut(s) 37, 45, 132, 217, 402, 1721, 2052
Sau3AI GATC 6 cut(s) 352, 710, 724, 1276, 1645, 2018
Sau96I GGNCC 2 cut(s) 755, 1049
SchI GAGTC 2 cut(s) 903, 1943
ScrFI CCNGG 1 cut(s) 1549
SduI GDGCHC 2 cut(s) 248, 964
SfaNI GCATC 3 cut(s) 424, 1300, 1570
SfcI CTRYAG 2 cut(s) 1612, 1633
SfoI GGCGCC 1 cut(s) 460
Sfr274I CTCGAG 1 cut(s) 192
SfuI TTCGAA 1 cut(s) 889
SinI GGWCC 2 cut(s) 755, 1049
SlaI CTCGAG 1 cut(s) 192
SmiMI CAYNNNNRTG 1 cut(s) 1834
SmlI CTYRAG 3 cut(s) 192, 671, 1389
SmoI CTYRAG 3 cut(s) 192, 671, 1389
SpeI ACTAGT 1 cut(s) 1247
SseBI AGGCCT 1 cut(s) 80
SsiI CCGC 4 cut(s) 37, 375, 1721, 2067
SspDI GGCGCC 1 cut(s) 458
SspI AATATT 1 cut(s) 493
SspMI CTAG 5 cut(s) 516, 1200, 1248, 1800, 1974
StuI AGGCCT 1 cut(s) 80
StyD4I CCNGG 1 cut(s) 1547
StyI CCWWGG 1 cut(s) 440
TaaI ACNGT 8 cut(s) 686, 788, 1019, 1121, 1479, 1730, 1836, 2139
TaiI ACGT 1 cut(s) 2039
TaqI TCGA 4 cut(s) 193, 379, 889, 1447
TatI WGTACW 2 cut(s) 531, 1116
TauI GCSGC 2 cut(s) 39, 1723
TfiI GAWTC 5 cut(s) 139, 361, 452, 1216, 1229
Tru1I TTAA 6 cut(s) 168, 446, 606, 672, 1554, 1779
Tru9I TTAA 6 cut(s) 168, 446, 606, 672, 1554, 1779
TscAI CASTG 7 cut(s) 93, 822, 1432, 1841, 1911, 2082, 2142
TseFI GTSAC 4 cut(s) 329, 1250, 1473, 1651
TseI GCWGC 5 cut(s) 44, 131, 216, 401, 2051
Tsp45I GTSAC 4 cut(s) 329, 1250, 1473, 1651
TspGWI ACGGA 1 cut(s) 32
TspRI CASTG 7 cut(s) 93, 822, 1432, 1841, 1911, 2082, 2142
Vha464I CTTAAG 1 cut(s) 671
VneI GTGCAC 1 cut(s) 960
VpaK11BI GGWCC 2 cut(s) 755, 1049
XagI CCTNNNNNAGG 1 cut(s) 2061
XapI RAATTY 3 cut(s) 381, 1662, 1781
XceI RCATGY 2 cut(s) 629, 1682
XcmI CCANNNNNNNNNTGG 1 cut(s) 846
XhoI CTCGAG 1 cut(s) 192
XmnI GAANNNNTTC 1 cut(s) 72
XspI CTAG 5 cut(s) 516, 1200, 1248, 1800, 1974
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.