Mitochondrial protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 513 |
| AccI | GTMKAC | 1 cut(s) | 414 |
| AciI | CCGC | 3 cut(s) | 520, 1013, 1413 |
| AclWI | GGATC | 6 cut(s) | 308, 553, 589, 633, 1027, 1040 |
| AcsI | RAATTY | 2 cut(s) | 997, 1633 |
| AcuI | CTGAAG | 3 cut(s) | 143, 684, 1194 |
| AdeI | CACNNNGTG | 1 cut(s) | 680 |
| AfaI | GTAC | 6 cut(s) | 81, 856, 1322, 1447, 1650, 1771 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 851, 1291, 1658 |
| AflIII | ACRYGT | 1 cut(s) | 331 |
| AgsI | TTSAA | 3 cut(s) | 205, 1430, 1743 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 72 |
| AhlI | ACTAGT | 1 cut(s) | 1778 |
| AjnI | CCWGG | 1 cut(s) | 985 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1223, 1255 |
| AluBI | AGCT | 4 cut(s) | 154, 954, 1375, 1401 |
| AluI | AGCT | 4 cut(s) | 154, 954, 1375, 1401 |
| Alw21I | GWGCWC | 3 cut(s) | 131, 1101, 1556 |
| Alw26I | GTCTC | 2 cut(s) | 191, 504 |
| AlwI | GGATC | 6 cut(s) | 308, 553, 589, 633, 1027, 1040 |
| Ama87I | CYCGRG | 1 cut(s) | 1186 |
| AoxI | GGCC | 4 cut(s) | 1005, 1116, 1224, 1860 |
| ApeKI | GCWGC | 4 cut(s) | 251, 715, 1127, 1401 |
| ApoI | RAATTY | 2 cut(s) | 997, 1633 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 734, 766, 1351, 1383 |
| AseI | ATTAAT | 1 cut(s) | 53 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1626 |
| AspLEI | GCGC | 1 cut(s) | 715 |
| AspS9I | GGNCC | 3 cut(s) | 346, 1077, 1116 |
| AsuC2I | CCSGG | 1 cut(s) | 1286 |
| AsuHPI | GGTGA | 1 cut(s) | 206 |
| AsuII | TTCGAA | 1 cut(s) | 697 |
| AvaI | CYCGRG | 1 cut(s) | 1186 |
| AvaII | GGWCC | 2 cut(s) | 346, 1077 |
| AxyI | CCTNAGG | 1 cut(s) | 1814 |
| BamHI | GGATCC | 1 cut(s) | 1032 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 426, 458 |
| Bbv12I | GWGCWC | 3 cut(s) | 131, 1101, 1556 |
| BbvI | GCAGC | 4 cut(s) | 263, 702, 1114, 1388 |
| BccI | CCATC | 1 cut(s) | 111 |
| BceAI | ACGGC | 1 cut(s) | 740 |
| BciT130I | CCWGG | 1 cut(s) | 987 |
| BclI | TGATCA | 1 cut(s) | 468 |
| BcnI | CCSGG | 1 cut(s) | 1286 |
| BcoDI | GTCTC | 2 cut(s) | 191, 504 |
| BcuI | ACTAGT | 1 cut(s) | 1778 |
| BfaI | CTAG | 5 cut(s) | 77, 507, 1248, 1767, 1779 |
| BfmI | CTRYAG | 1 cut(s) | 1332 |
| BfoI | RGCGCY | 1 cut(s) | 716 |
| BfuAI | ACCTGC | 1 cut(s) | 513 |
| BisI | GCNGC | 5 cut(s) | 252, 520, 716, 1128, 1402 |
| BlsI | GCNGC | 5 cut(s) | 253, 521, 717, 1129, 1403 |
| BmcAI | AGTACT | 1 cut(s) | 81 |
| Bme1390I | CCNGG | 2 cut(s) | 987, 1286 |
| Bme18I | GGWCC | 2 cut(s) | 346, 1077 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 72 |
| BmeT110I | CYCGRG | 1 cut(s) | 1186 |
| BmgT120I | GGNCC | 3 cut(s) | 346, 1077, 1116 |
| BmiI | GGNNCC | 3 cut(s) | 427, 672, 1034 |
| BmrFI | CCNGG | 2 cut(s) | 987, 1286 |
| BmrI | ACTGGG | 4 cut(s) | 169, 203, 811, 1037 |
| BmsI | GCATC | 4 cut(s) | 184, 195, 277, 1006 |
| BmuI | ACTGGG | 4 cut(s) | 169, 203, 811, 1037 |
| Bpu14I | TTCGAA | 1 cut(s) | 697 |
| BpuMI | CCSGG | 1 cut(s) | 1286 |
| BsaJI | CCNNGG | 2 cut(s) | 390, 1221 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 851, 1291, 1658 |
| Bse1I | ACTGG | 4 cut(s) | 164, 209, 806, 1032 |
| Bse21I | CCTNAGG | 1 cut(s) | 1814 |
| Bse3DI | GCAATG | 2 cut(s) | 744, 1323 |
| BseBI | CCWGG | 1 cut(s) | 987 |
| BseDI | CCNNGG | 2 cut(s) | 390, 1221 |
| BseGI | GGATG | 3 cut(s) | 122, 283, 1021 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 851, 1291, 1658 |
| BseMI | GCAATG | 2 cut(s) | 744, 1323 |
| BseMII | CTCAG | 3 cut(s) | 691, 749, 1453 |
| BseNI | ACTGG | 4 cut(s) | 164, 209, 806, 1032 |
| BseXI | GCAGC | 4 cut(s) | 263, 702, 1114, 1388 |
| BshFI | GGCC | 4 cut(s) | 1007, 1118, 1226, 1862 |
| BsiHKAI | GWGCWC | 3 cut(s) | 131, 1101, 1556 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1186 |
| BsiSI | CCGG | 1 cut(s) | 1285 |
| BslFI | GGGAC | 3 cut(s) | 79, 370, 1436 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 851, 1291, 1658 |
| BsmAI | GTCTC | 2 cut(s) | 191, 504 |
| BsmFI | GGGAC | 3 cut(s) | 79, 370, 1436 |
| BsnI | GGCC | 4 cut(s) | 1007, 1118, 1226, 1862 |
| BsoBI | CYCGRG | 1 cut(s) | 1186 |
| Bsp119I | TTCGAA | 1 cut(s) | 697 |
| Bsp1286I | GDGCHC | 3 cut(s) | 131, 1101, 1556 |
| Bsp143I | GATC | 7 cut(s) | 313, 468, 545, 581, 625, 1032, 1336 |
| Bsp19I | CCATGG | 2 cut(s) | 390, 1221 |
| BspACI | CCGC | 3 cut(s) | 520, 1013, 1413 |
| BspANI | GGCC | 4 cut(s) | 1007, 1118, 1226, 1862 |
| BspCNI | CTCAG | 3 cut(s) | 690, 748, 1452 |
| BspLI | GGNNCC | 3 cut(s) | 427, 672, 1034 |
| BspMI | ACCTGC | 1 cut(s) | 513 |
| BspPI | GGATC | 6 cut(s) | 308, 553, 589, 633, 1027, 1040 |
| BspT104I | TTCGAA | 1 cut(s) | 697 |
| BsrDI | GCAATG | 2 cut(s) | 744, 1323 |
| BsrI | ACTGG | 4 cut(s) | 164, 209, 806, 1032 |
| BssECI | CCNNGG | 2 cut(s) | 390, 1221 |
| BssMI | GATC | 7 cut(s) | 313, 468, 545, 581, 625, 1032, 1336 |
| BssT1I | CCWWGG | 2 cut(s) | 390, 1221 |
| Bst2UI | CCWGG | 1 cut(s) | 987 |
| Bst6I | CTCTTC | 1 cut(s) | 1617 |
| BstBI | TTCGAA | 1 cut(s) | 697 |
| BstC8I | GCNNGC | 2 cut(s) | 659, 1417 |
| BstDEI | CTNAG | 8 cut(s) | 108, 182, 677, 735, 1439, 1466, 1797, 1814 |
| BstDSI | CCRYGG | 2 cut(s) | 390, 1221 |
| BstF5I | GGATG | 3 cut(s) | 122, 283, 1021 |
| BstH2I | RGCGCY | 1 cut(s) | 716 |
| BstHHI | GCGC | 1 cut(s) | 715 |
| BstKTI | GATC | 7 cut(s) | 316, 471, 548, 584, 628, 1035, 1339 |
| BstMAI | GTCTC | 2 cut(s) | 191, 504 |
| BstMBI | GATC | 7 cut(s) | 313, 468, 545, 581, 625, 1032, 1336 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1115, 1124, 1809 |
| BstNI | CCWGG | 1 cut(s) | 987 |
| BstNSI | RCATGY | 4 cut(s) | 335, 649, 1153, 1547 |
| BstSCI | CCNGG | 2 cut(s) | 985, 1284 |
| BstSFI | CTRYAG | 1 cut(s) | 1332 |
| BstV1I | GCAGC | 4 cut(s) | 263, 702, 1114, 1388 |
| BstX2I | RGATCY | 4 cut(s) | 545, 581, 625, 1032 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1222 |
| BstYI | RGATCY | 4 cut(s) | 545, 581, 625, 1032 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1814 |
| BsuRI | GGCC | 4 cut(s) | 1007, 1118, 1226, 1862 |
| BtgI | CCRYGG | 2 cut(s) | 390, 1221 |
| BtgZI | GCGATG | 1 cut(s) | 1073 |
| BtsCI | GGATG | 3 cut(s) | 122, 283, 1021 |
| BtsIMutI | CAGTG | 5 cut(s) | 216, 685, 799, 1556, 1755 |
| BveI | ACCTGC | 1 cut(s) | 513 |
| Cac8I | GCNNGC | 2 cut(s) | 659, 1417 |
| CfoI | GCGC | 1 cut(s) | 715 |
| Cfr13I | GGNCC | 3 cut(s) | 346, 1077, 1116 |
| CsiI | ACCWGGT | 1 cut(s) | 985 |
| Csp6I | GTAC | 6 cut(s) | 80, 855, 1321, 1446, 1649, 1770 |
| CviQI | GTAC | 6 cut(s) | 80, 855, 1321, 1446, 1649, 1770 |
| DdeI | CTNAG | 8 cut(s) | 108, 182, 677, 735, 1439, 1466, 1797, 1814 |
| DpnI | GATC | 7 cut(s) | 315, 470, 547, 583, 627, 1034, 1338 |
| DpnII | GATC | 7 cut(s) | 313, 468, 545, 581, 625, 1032, 1336 |
| DraI | TTTAAA | 3 cut(s) | 25, 996, 1159 |
| DraIII | CACNNNGTG | 1 cut(s) | 680 |
| DriI | GACNNNNNGTC | 1 cut(s) | 72 |
| Eam1104I | CTCTTC | 1 cut(s) | 1617 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 72 |
| EarI | CTCTTC | 1 cut(s) | 1617 |
| Eco130I | CCWWGG | 2 cut(s) | 390, 1221 |
| Eco32I | GATATC | 1 cut(s) | 964 |
| Eco47I | GGWCC | 2 cut(s) | 346, 1077 |
| Eco57I | CTGAAG | 3 cut(s) | 143, 684, 1194 |
| Eco81I | CCTNAGG | 1 cut(s) | 1814 |
| Eco88I | CYCGRG | 1 cut(s) | 1186 |
| EcoO109I | RGGNCCY | 1 cut(s) | 346 |
| EcoRII | CCWGG | 1 cut(s) | 985 |
| EcoRV | GATATC | 1 cut(s) | 964 |
| EcoT14I | CCWWGG | 2 cut(s) | 390, 1221 |
| EcoT22I | ATGCAT | 1 cut(s) | 600 |
| ErhI | CCWWGG | 2 cut(s) | 390, 1221 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1296, 1328 |
| FaqI | GGGAC | 3 cut(s) | 79, 370, 1436 |
| FbaI | TGATCA | 1 cut(s) | 468 |
| FblI | GTMKAC | 1 cut(s) | 414 |
| Fnu4HI | GCNGC | 5 cut(s) | 252, 520, 716, 1128, 1402 |
| FokI | GGATG | 3 cut(s) | 129, 290, 1028 |
| Fsp4HI | GCNGC | 5 cut(s) | 252, 520, 716, 1128, 1402 |
| FspBI | CTAG | 5 cut(s) | 77, 507, 1248, 1767, 1779 |
| GlaI | GCGC | 1 cut(s) | 714 |
| GluI | GCNGC | 5 cut(s) | 252, 520, 716, 1128, 1402 |
| HaeII | RGCGCY | 1 cut(s) | 716 |
| HaeIII | GGCC | 4 cut(s) | 1007, 1118, 1226, 1862 |
| HapII | CCGG | 1 cut(s) | 1285 |
| HhaI | GCGC | 1 cut(s) | 715 |
| Hin6I | GCGC | 1 cut(s) | 713 |
| HinP1I | GCGC | 1 cut(s) | 713 |
| HincII | GTYRAC | 5 cut(s) | 457, 840, 1270, 1424, 1849 |
| HindII | GTYRAC | 5 cut(s) | 457, 840, 1270, 1424, 1849 |
| HinfI | GANTC | 3 cut(s) | 358, 398, 774 |
| HpaI | GTTAAC | 2 cut(s) | 1270, 1849 |
| HpaII | CCGG | 1 cut(s) | 1285 |
| HphI | GGTGA | 1 cut(s) | 206 |
| Hpy166II | GTNNAC | 8 cut(s) | 415, 457, 760, 840, 1270, 1410, 1424, 1849 |
| Hpy188I | TCNGA | 1 cut(s) | 1514 |
| Hpy188III | TCNNGA | 7 cut(s) | 466, 623, 689, 814, 1036, 1248, 1356 |
| Hpy8I | GTNNAC | 8 cut(s) | 415, 457, 760, 840, 1270, 1410, 1424, 1849 |
| Hpy99I | CGWCG | 1 cut(s) | 1657 |
| HpyAV | CCTTC | 5 cut(s) | 265, 659, 1175, 1353, 1727 |
| HpyCH4IV | ACGT | 4 cut(s) | 826, 1112, 1281, 1462 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1115, 1124, 1809 |
| HpyF3I | CTNAG | 8 cut(s) | 108, 182, 677, 735, 1439, 1466, 1797, 1814 |
| HpySE526I | ACGT | 4 cut(s) | 826, 1112, 1281, 1462 |
| HspAI | GCGC | 1 cut(s) | 713 |
| Ksp22I | TGATCA | 1 cut(s) | 468 |
| KspAI | GTTAAC | 2 cut(s) | 1270, 1849 |
| Kzo9I | GATC | 7 cut(s) | 313, 468, 545, 581, 625, 1032, 1336 |
| Lsp1109I | GCAGC | 4 cut(s) | 263, 702, 1114, 1388 |
| LweI | GCATC | 4 cut(s) | 184, 195, 277, 1006 |
| MabI | ACCWGGT | 1 cut(s) | 985 |
| MaeI | CTAG | 5 cut(s) | 77, 507, 1248, 1767, 1779 |
| MaeII | ACGT | 4 cut(s) | 826, 1112, 1281, 1462 |
| MaeIII | GTNAC | 9 cut(s) | 214, 338, 827, 1199, 1294, 1595, 1693, 1805, 1828 |
| MalI | GATC | 7 cut(s) | 315, 470, 547, 583, 627, 1034, 1338 |
| MboI | GATC | 7 cut(s) | 313, 468, 545, 581, 625, 1032, 1336 |
| MboII | GAAGA | 5 cut(s) | 6, 434, 620, 1378, 1634 |
| MflI | RGATCY | 4 cut(s) | 545, 581, 625, 1032 |
| MhlI | GDGCHC | 3 cut(s) | 131, 1101, 1556 |
| MlyI | GAGTC | 1 cut(s) | 352 |
| MmeI | TCCRAC | 3 cut(s) | 1483, 1599, 1660 |
| MnlI | CCTC | 9 cut(s) | 274, 397, 412, 1095, 1237, 1464, 1774, 1836, 1906 |
| Mph1103I | ATGCAT | 1 cut(s) | 600 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1626 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1220, 1263 |
| MspI | CCGG | 1 cut(s) | 1285 |
| MspR9I | CCNGG | 2 cut(s) | 987, 1286 |
| MvaI | CCWGG | 1 cut(s) | 987 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1115, 1124, 1809 |
| NciI | CCSGG | 1 cut(s) | 1286 |
| NcoI | CCATGG | 2 cut(s) | 390, 1221 |
| NdeII | GATC | 7 cut(s) | 313, 468, 545, 581, 625, 1032, 1336 |
| NlaIV | GGNNCC | 3 cut(s) | 427, 672, 1034 |
| NmuCI | GTSAC | 2 cut(s) | 1199, 1805 |
| NsiI | ATGCAT | 1 cut(s) | 600 |
| NspI | RCATGY | 4 cut(s) | 335, 649, 1153, 1547 |
| NspV | TTCGAA | 1 cut(s) | 697 |
| PciI | ACATGT | 1 cut(s) | 331 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 694 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1626 |
| PfeI | GAWTC | 2 cut(s) | 398, 774 |
| PfoI | TCCNGGA | 1 cut(s) | 1284 |
| PkrI | GCNGC | 5 cut(s) | 253, 521, 717, 1129, 1403 |
| PleI | GAGTC | 1 cut(s) | 352 |
| PpsI | GAGTC | 1 cut(s) | 352 |
| PpuMI | RGGWCCY | 1 cut(s) | 346 |
| PscI | ACATGT | 1 cut(s) | 331 |
| PshBI | ATTAAT | 1 cut(s) | 53 |
| Psp5II | RGGWCCY | 1 cut(s) | 346 |
| Psp6I | CCWGG | 1 cut(s) | 985 |
| PspGI | CCWGG | 1 cut(s) | 985 |
| PspN4I | GGNNCC | 3 cut(s) | 427, 672, 1034 |
| PspPI | GGNCC | 3 cut(s) | 346, 1077, 1116 |
| PspPPI | RGGWCCY | 1 cut(s) | 346 |
| PsuI | RGATCY | 4 cut(s) | 545, 581, 625, 1032 |
| RsaI | GTAC | 6 cut(s) | 81, 856, 1322, 1447, 1650, 1771 |
| RsaNI | GTAC | 6 cut(s) | 80, 855, 1321, 1446, 1649, 1770 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1220, 1263 |
| SatI | GCNGC | 5 cut(s) | 252, 520, 716, 1128, 1402 |
| Sau3AI | GATC | 7 cut(s) | 313, 468, 545, 581, 625, 1032, 1336 |
| Sau96I | GGNCC | 3 cut(s) | 346, 1077, 1116 |
| ScaI | AGTACT | 1 cut(s) | 81 |
| SchI | GAGTC | 1 cut(s) | 352 |
| ScrFI | CCNGG | 2 cut(s) | 987, 1286 |
| SduI | GDGCHC | 3 cut(s) | 131, 1101, 1556 |
| SexAI | ACCWGGT | 1 cut(s) | 985 |
| SfaNI | GCATC | 4 cut(s) | 184, 195, 277, 1006 |
| SfcI | CTRYAG | 1 cut(s) | 1332 |
| SfuI | TTCGAA | 1 cut(s) | 697 |
| SinI | GGWCC | 2 cut(s) | 346, 1077 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1220, 1263 |
| SpeI | ACTAGT | 1 cut(s) | 1778 |
| SsiI | CCGC | 3 cut(s) | 520, 1013, 1413 |
| SspI | AATATT | 2 cut(s) | 822, 1062 |
| SspMI | CTAG | 5 cut(s) | 77, 507, 1248, 1767, 1779 |
| StyD4I | CCNGG | 2 cut(s) | 985, 1284 |
| StyI | CCWWGG | 2 cut(s) | 390, 1221 |
| TaiI | ACGT | 4 cut(s) | 829, 1115, 1284, 1465 |
| TaqI | TCGA | 5 cut(s) | 637, 697, 772, 1263, 1564 |
| TatI | WGTACW | 3 cut(s) | 79, 1320, 1769 |
| TauI | GCSGC | 1 cut(s) | 522 |
| TfiI | GAWTC | 2 cut(s) | 398, 774 |
| TscAI | CASTG | 5 cut(s) | 216, 685, 806, 1556, 1762 |
| TseFI | GTSAC | 2 cut(s) | 1199, 1805 |
| TseI | GCWGC | 4 cut(s) | 251, 715, 1127, 1401 |
| Tsp45I | GTSAC | 2 cut(s) | 1199, 1805 |
| TspGWI | ACGGA | 1 cut(s) | 1670 |
| TspRI | CASTG | 5 cut(s) | 216, 685, 806, 1556, 1762 |
| VpaK11BI | GGWCC | 2 cut(s) | 346, 1077 |
| VspI | ATTAAT | 1 cut(s) | 53 |
| XapI | RAATTY | 2 cut(s) | 997, 1633 |
| XbaI | TCTAGA | 1 cut(s) | 1247 |
| XceI | RCATGY | 4 cut(s) | 335, 649, 1153, 1547 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 538, 619 |
| XmiI | GTMKAC | 1 cut(s) | 414 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1626 |
| XspI | CTAG | 5 cut(s) | 77, 507, 1248, 1767, 1779 |
| ZrmI | AGTACT | 1 cut(s) | 81 |
| Zsp2I | ATGCAT | 1 cut(s) | 600 |