pycom12g14660

Flavin containing amine oxidoreductase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Forward (+)
17189119 .. 17189943
825 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g14660.1

Sequence Viewer

Length: 681 bp
ATGGATGGTGTAAAACCATGTTCTACTCCACTTGGTTCTGCCAAATTGGATCTCACAGGTTCTTTGATGTCCAATCCAGAGGAATATCGTTATATTGTTGGAGCATTGCAATACTTAACTTGGACTAGACGAGATTTGTCTTATGCAGTTAATTTGGCATGTCAATTTTTGCATTATCCTCGAGAACCTCATTTTCAGGCAATAAAAGGCATACTCAGATATCTCGAGGGCACACTTGACCATGGTCTTTGGTTTCCAAAAACCACAGCTCCTCTTACACTTAAAGCCTTTTCGGGTGTTGATTGGGTTGGTTGTTCTTGGGATAGACGATCTACGGGTGGTTTCTGCTTTAAGTTGCCTTCTCTGCCTCAGATTTGGTGTGATAATGTTTCTGATATTGCCTTAGCCTCTAATCCAATGTTTCATGCTAGAACAAAATACGTCGAAATTGATTATCATTATATCCAGGAATTGGTTCTAGTTGAACTTCTCAAAGTCCAGTTTGTATGCAGTCATGATCAATTGGCAGATATCTATACAAGGTCTCTTCCCAGACAACATTTTCTTCTTCTCAGATCCAAGCTTTCACTTCAACCTTCTCTGTTTAGCTTGAAGGGGTGTGAAGAGAAAGTTACTACGGTAAATTGTAGTTATAATAACCACAAGTCAAATGTTAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

227

Amino Acids

25.77

Weight (kDa)

8.38

Isoelectric Point (pI)

36.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 654
AccB7I CCANNNNNTGG 1 cut(s) 472
AclWI GGATC 2 cut(s) 57, 570
AfiI CCNNNNNNNGG 1 cut(s) 472
AgsI TTSAA 3 cut(s) 485, 593, 613
AjnI CCWGG 1 cut(s) 465
AluBI AGCT 3 cut(s) 269, 583, 609
AluI AGCT 3 cut(s) 269, 583, 609
Alw26I GTCTC 1 cut(s) 549
AlwI GGATC 2 cut(s) 57, 570
Ama87I CYCGRG 2 cut(s) 180, 224
Asp700I GAANNNNTTC 1 cut(s) 474
AvaI CYCGRG 2 cut(s) 180, 224
BaeGI GKGCMC 1 cut(s) 233
BcgI CGANNNNNNTGC 2 cut(s) 161, 195
BciT130I CCWGG 1 cut(s) 467
BclI TGATCA 1 cut(s) 517
BcoDI GTCTC 1 cut(s) 549
BfaI CTAG 3 cut(s) 126, 429, 479
Bme1390I CCNGG 1 cut(s) 467
BmeT110I CYCGRG 2 cut(s) 180, 224
BmrFI CCNGG 1 cut(s) 467
BoxI GACNNNNGTC 1 cut(s) 243
Bpu10I CCTNAGC 1 cut(s) 403
BsaI GGTCTC 1 cut(s) 549
BsaJI CCNNGG 1 cut(s) 241
BsaXI ACNNNNNCTCC 2 cut(s) 253, 283
Bsc4I CCNNNNNNNGG 1 cut(s) 472
Bse1I ACTGG 1 cut(s) 499
Bse3DI GCAATG 1 cut(s) 104
BseBI CCWGG 1 cut(s) 467
BseDI CCNNGG 1 cut(s) 241
BseGI GGATG 1 cut(s) 10
BseLI CCNNNNNNNGG 1 cut(s) 472
BseMI GCAATG 1 cut(s) 104
BseMII CTCAG 3 cut(s) 229, 383, 586
BseNI ACTGG 1 cut(s) 499
BseRI GAGGAG 1 cut(s) 261
BseSI GKGCMC 1 cut(s) 233
BsiHKCI CYCGRG 2 cut(s) 180, 224
BslI CCNNNNNNNGG 1 cut(s) 472
BsmAI GTCTC 1 cut(s) 549
Bso31I GGTCTC 1 cut(s) 549
BsoBI CYCGRG 2 cut(s) 180, 224
Bsp1286I GDGCHC 1 cut(s) 233
Bsp143I GATC 4 cut(s) 49, 329, 517, 575
Bsp19I CCATGG 1 cut(s) 241
BspCNI CTCAG 3 cut(s) 228, 382, 585
BspHI TCATGA 1 cut(s) 514
BspPI GGATC 2 cut(s) 57, 570
BspTNI GGTCTC 1 cut(s) 549
BsrDI GCAATG 1 cut(s) 104
BsrI ACTGG 1 cut(s) 499
BssECI CCNNGG 1 cut(s) 241
BssMI GATC 4 cut(s) 49, 329, 517, 575
BssT1I CCWWGG 1 cut(s) 241
Bst2UI CCWGG 1 cut(s) 467
Bst4CI ACNGT 1 cut(s) 640
Bst6I CTCTTC 2 cut(s) 552, 618
BstDEI CTNAG 4 cut(s) 215, 369, 403, 572
BstDSI CCRYGG 1 cut(s) 241
BstF5I GGATG 1 cut(s) 10
BstKTI GATC 4 cut(s) 52, 332, 520, 578
BstMAI GTCTC 1 cut(s) 549
BstMBI GATC 4 cut(s) 49, 329, 517, 575
BstMWI GCNNNNNNNGC 1 cut(s) 364
BstNI CCWGG 1 cut(s) 467
BstNSI RCATGY 1 cut(s) 162
BstPAI GACNNNNGTC 1 cut(s) 243
BstSCI CCNGG 1 cut(s) 465
BstSLI GKGCMC 1 cut(s) 233
BstX2I RGATCY 2 cut(s) 49, 575
BstYI RGATCY 2 cut(s) 49, 575
BtgI CCRYGG 1 cut(s) 241
BtsCI GGATG 1 cut(s) 10
CciI TCATGA 1 cut(s) 514
CviAII CATG 5 cut(s) 18, 159, 242, 425, 515
CviJI RGCY 5 cut(s) 269, 287, 407, 583, 609
CviKI_1 RGCY 5 cut(s) 269, 287, 407, 583, 609
DdeI CTNAG 4 cut(s) 215, 369, 403, 572
DpnI GATC 4 cut(s) 51, 331, 519, 577
DpnII GATC 4 cut(s) 49, 329, 517, 575
Eam1104I CTCTTC 2 cut(s) 552, 618
EarI CTCTTC 2 cut(s) 552, 618
Eco130I CCWWGG 1 cut(s) 241
Eco31I GGTCTC 1 cut(s) 549
Eco32I GATATC 2 cut(s) 221, 532
Eco88I CYCGRG 2 cut(s) 180, 224
EcoRII CCWGG 1 cut(s) 465
EcoRV GATATC 2 cut(s) 221, 532
EcoT14I CCWWGG 1 cut(s) 241
ErhI CCWWGG 1 cut(s) 241
FaeI CATG 5 cut(s) 21, 162, 245, 428, 518
FatI CATG 5 cut(s) 17, 158, 241, 424, 514
FbaI TGATCA 1 cut(s) 517
FokI GGATG 1 cut(s) 17
FspBI CTAG 3 cut(s) 126, 429, 479
Hin1II CATG 5 cut(s) 21, 162, 245, 428, 518
HindIII AAGCTT 1 cut(s) 581
Hpy188I TCNGA 4 cut(s) 218, 372, 394, 575
Hpy188III TCNNGA 4 cut(s) 77, 182, 224, 515
Hpy99I CGWCG 1 cut(s) 446
HpyAV CCTTC 3 cut(s) 369, 606, 607
HpyCH4III ACNGT 1 cut(s) 640
HpyCH4IV ACGT 1 cut(s) 441
HpyCH4V TGCA 4 cut(s) 109, 146, 172, 510
HpyF10VI GCNNNNNNNGC 1 cut(s) 364
HpyF3I CTNAG 4 cut(s) 215, 369, 403, 572
HpySE526I ACGT 1 cut(s) 441
Hsp92II CATG 5 cut(s) 21, 162, 245, 428, 518
Ksp22I TGATCA 1 cut(s) 517
Kzo9I GATC 4 cut(s) 49, 329, 517, 575
LmnI GCTCC 2 cut(s) 101, 274
LpnPI CCDG 7 cut(s) 42, 90, 182, 452, 479, 512, 565
MaeI CTAG 3 cut(s) 126, 429, 479
MaeII ACGT 1 cut(s) 441
MaeIII GTNAC 1 cut(s) 631
MalI GATC 4 cut(s) 51, 331, 519, 577
MboI GATC 4 cut(s) 49, 329, 517, 575
MboII GAAGA 4 cut(s) 539, 557, 560, 635
MfeI CAATTG 1 cut(s) 521
MflI RGATCY 2 cut(s) 49, 575
MhlI GDGCHC 1 cut(s) 233
MluCI AATT 7 cut(s) 44, 151, 164, 447, 470, 521, 643
MmeI TCCRAC 1 cut(s) 79
MnlI CCTC 7 cut(s) 73, 189, 198, 220, 282, 378, 418
MroXI GAANNNNTTC 1 cut(s) 474
MseI TTAA 4 cut(s) 116, 150, 282, 351
MspR9I CCNGG 1 cut(s) 467
MunI CAATTG 1 cut(s) 521
MvaI CCWGG 1 cut(s) 467
MwoI GCNNNNNNNGC 1 cut(s) 364
NcoI CCATGG 1 cut(s) 241
NdeII GATC 4 cut(s) 49, 329, 517, 575
NlaIII CATG 5 cut(s) 21, 162, 245, 428, 518
NspI RCATGY 1 cut(s) 162
PaeR7I CTCGAG 2 cut(s) 180, 224
PagI TCATGA 1 cut(s) 514
PdmI GAANNNNTTC 1 cut(s) 474
PflMI CCANNNNNTGG 1 cut(s) 472
PfoI TCCNGGA 1 cut(s) 465
PshAI GACNNNNGTC 1 cut(s) 243
PsiI TTATAA 1 cut(s) 654
Psp6I CCWGG 1 cut(s) 465
PspGI CCWGG 1 cut(s) 465
PsuI RGATCY 2 cut(s) 49, 575
SaqAI TTAA 4 cut(s) 116, 150, 282, 351
Sau3AI GATC 4 cut(s) 49, 329, 517, 575
ScrFI CCNGG 1 cut(s) 467
SduI GDGCHC 1 cut(s) 233
SetI ASST 8 cut(s) 61, 190, 271, 444, 545, 585, 598, 611
Sfr274I CTCGAG 2 cut(s) 180, 224
SlaI CTCGAG 2 cut(s) 180, 224
SmlI CTYRAG 2 cut(s) 180, 224
SmoI CTYRAG 2 cut(s) 180, 224
Sse9I AATT 7 cut(s) 44, 151, 164, 447, 470, 521, 643
SspMI CTAG 3 cut(s) 126, 429, 479
StyD4I CCNGG 1 cut(s) 465
StyI CCWWGG 1 cut(s) 241
TaaI ACNGT 1 cut(s) 640
TaiI ACGT 1 cut(s) 444
TaqI TCGA 3 cut(s) 181, 225, 444
TasI AATT 7 cut(s) 44, 151, 164, 447, 470, 521, 643
Tru1I TTAA 4 cut(s) 116, 150, 282, 351
Tru9I TTAA 4 cut(s) 116, 150, 282, 351
TspDTI ATGAA 1 cut(s) 413
Van91I CCANNNNNTGG 1 cut(s) 472
XceI RCATGY 1 cut(s) 162
XhoI CTCGAG 2 cut(s) 180, 224
XmnI GAANNNNTTC 1 cut(s) 474
XspI CTAG 3 cut(s) 126, 429, 479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.