Mitochondrial protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Retrotran_gag_2 | PF14223 | 42 - 215 | 5.9e-17 | gag-polypeptide of LTR copia-type |
| Pol_BBD | PF22936 | 345 - 424 | 6.1e-07 | Pol polyprotein, beta-barrel domain |
| gag_pre-integrs | PF13976 | 457 - 522 | 1e-09 | GAG-pre-integrase domain |
| rve | PF00665 | 537 - 635 | 1.6e-12 | Integrase core domain |
| SH3_retrovirus | PF25597 | 709 - 769 | 1.7e-21 | Retroviral polymerase SH3-like domain |
| RVT_2 | PF07727 | 910 - 1150 | 9.9e-70 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2226 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1890 |
| AatII | GACGTC | 1 cut(s) | 640 |
| Acc36I | ACCTGC | 2 cut(s) | 2527, 3034 |
| Acc65I | GGTACC | 1 cut(s) | 2740 |
| AccB1I | GGYRCC | 3 cut(s) | 2682, 2740, 3524 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2692 |
| AccI | GTMKAC | 2 cut(s) | 374, 3067 |
| AccII | CGCG | 3 cut(s) | 720, 732, 2569 |
| AciI | CCGC | 6 cut(s) | 720, 732, 1008, 3756, 3839, 4117 |
| AclI | AACGTT | 1 cut(s) | 2622 |
| AclWI | GGATC | 7 cut(s) | 90, 281, 1147, 2231, 2395, 3035, 3508 |
| AcoI | YGGCCR | 6 cut(s) | 202, 379, 757, 763, 868, 901 |
| AcsI | RAATTY | 6 cut(s) | 139, 1083, 1802, 2049, 2583, 2702 |
| AcuI | CTGAAG | 1 cut(s) | 2872 |
| AcyI | GRCGYC | 7 cut(s) | 5, 637, 2061, 2683, 3356, 3426, 3525 |
| AdeI | CACNNNGTG | 1 cut(s) | 3107 |
| AfaI | GTAC | 4 cut(s) | 88, 559, 2722, 2742 |
| AflII | CTTAAG | 1 cut(s) | 2168 |
| AflIII | ACRYGT | 5 cut(s) | 952, 2567, 2648, 2763, 3548 |
| AhlI | ACTAGT | 1 cut(s) | 1517 |
| AjiI | CACGTC | 3 cut(s) | 953, 968, 3551 |
| AjnI | CCWGG | 3 cut(s) | 700, 789, 3791 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2955, 2987, 4038, 4070 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 265, 297 |
| AluBI | AGCT | 8 cut(s) | 977, 1771, 2831, 3167, 3286, 3400, 3986, 4067 |
| AluI | AGCT | 8 cut(s) | 977, 1771, 2831, 3167, 3286, 3400, 3986, 4067 |
| Alw21I | GWGCWC | 2 cut(s) | 727, 844 |
| AlwI | GGATC | 7 cut(s) | 90, 281, 1147, 2231, 2395, 3035, 3508 |
| ApaI | GGGCCC | 1 cut(s) | 3321 |
| ApeKI | GCWGC | 4 cut(s) | 683, 983, 3283, 3620 |
| ApoI | RAATTY | 6 cut(s) | 139, 1083, 1802, 2049, 2583, 2702 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 877, 909 |
| AseI | ATTAAT | 5 cut(s) | 459, 1254, 1619, 1659, 2031 |
| Asp718I | GGTACC | 1 cut(s) | 2740 |
| AspLEI | GCGC | 4 cut(s) | 2685, 3527, 3953, 3996 |
| AspS9I | GGNCC | 6 cut(s) | 542, 704, 1318, 2344, 3317, 3318 |
| AsuC2I | CCSGG | 2 cut(s) | 3352, 4025 |
| AsuHPI | GGTGA | 5 cut(s) | 437, 1057, 2474, 3175, 3494 |
| AsuII | TTCGAA | 2 cut(s) | 2587, 3800 |
| AvaII | GGWCC | 3 cut(s) | 704, 1318, 2344 |
| BaeGI | GKGCMC | 1 cut(s) | 3321 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2724, 2757 |
| BalI | TGGCCA | 2 cut(s) | 204, 765 |
| BanI | GGYRCC | 3 cut(s) | 2682, 2740, 3524 |
| BanII | GRGCYC | 2 cut(s) | 672, 3321 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 550, 582 |
| BbsI | GAAGAC | 2 cut(s) | 2030, 2745 |
| Bbv12I | GWGCWC | 2 cut(s) | 727, 844 |
| BbvI | GCAGC | 4 cut(s) | 670, 970, 3295, 3607 |
| BceAI | ACGGC | 6 cut(s) | 366, 723, 744, 855, 916, 3682 |
| BciT130I | CCWGG | 3 cut(s) | 702, 791, 3793 |
| BciVI | GTATCC | 1 cut(s) | 884 |
| BclI | TGATCA | 2 cut(s) | 2562, 3661 |
| BcnI | CCSGG | 2 cut(s) | 3352, 4025 |
| BcuI | ACTAGT | 1 cut(s) | 1517 |
| BfaI | CTAG | 5 cut(s) | 1452, 1518, 2837, 3137, 3828 |
| BfmI | CTRYAG | 3 cut(s) | 3027, 3404, 3621 |
| BfoI | RGCGCY | 3 cut(s) | 2686, 3528, 3954 |
| BfrI | CTTAAG | 1 cut(s) | 2168 |
| BfuAI | ACCTGC | 2 cut(s) | 2527, 3034 |
| BfuI | GTATCC | 1 cut(s) | 884 |
| BglII | AGATCT | 1 cut(s) | 3310 |
| BisI | GCNGC | 4 cut(s) | 684, 984, 3284, 3621 |
| BlsI | GCNGC | 4 cut(s) | 685, 985, 3285, 3622 |
| BmcAI | AGTACT | 1 cut(s) | 559 |
| Bme1390I | CCNGG | 5 cut(s) | 702, 791, 3352, 3793, 4025 |
| Bme18I | GGWCC | 3 cut(s) | 704, 1318, 2344 |
| BmgBI | CACGTC | 3 cut(s) | 953, 968, 3551 |
| BmgT120I | GGNCC | 6 cut(s) | 542, 704, 1318, 2344, 3317, 3318 |
| BmiI | GGNNCC | 7 cut(s) | 163, 1051, 2684, 2742, 2812, 3319, 3526 |
| BmrFI | CCNGG | 5 cut(s) | 702, 791, 3352, 3793, 4025 |
| BmrI | ACTGGG | 4 cut(s) | 1591, 2092, 3625, 3678 |
| BmsI | GCATC | 9 cut(s) | 187, 226, 244, 1013, 1032, 1326, 1426, 2799, 3642 |
| BmuI | ACTGGG | 4 cut(s) | 1591, 2092, 3625, 3678 |
| BpiI | GAAGAC | 2 cut(s) | 2030, 2745 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3476, 3508 |
| BpmI | CTGGAG | 2 cut(s) | 1068, 3814 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1905 |
| Bpu14I | TTCGAA | 2 cut(s) | 2587, 3800 |
| BpuEI | CTTGAG | 3 cut(s) | 2487, 3147, 3487 |
| BpuMI | CCSGG | 2 cut(s) | 3352, 4025 |
| Bsa29I | ATCGAT | 1 cut(s) | 915 |
| BsaAI | YACGTR | 1 cut(s) | 353 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1077, 3741, 3906 |
| BsaHI | GRCGYC | 7 cut(s) | 5, 637, 2061, 2683, 3356, 3426, 3525 |
| BsaI | GGTCTC | 2 cut(s) | 1922, 3084 |
| BsaJI | CCNNGG | 7 cut(s) | 712, 739, 760, 1399, 1555, 2691, 4098 |
| BsaWI | WCCGGW | 1 cut(s) | 2893 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 464, 494, 1818, 1848 |
| Bse3DI | GCAATG | 2 cut(s) | 3309, 3954 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1077, 3741, 3906 |
| BseBI | CCWGG | 3 cut(s) | 702, 791, 3793 |
| BseCI | ATCGAT | 1 cut(s) | 915 |
| BseDI | CCNNGG | 7 cut(s) | 712, 739, 760, 1399, 1555, 2691, 4098 |
| BseJI | GATNNNNATC | 3 cut(s) | 1077, 3741, 3906 |
| BseMI | GCAATG | 2 cut(s) | 3309, 3954 |
| BseMII | CTCAG | 5 cut(s) | 383, 432, 1896, 3284, 3507 |
| BseRI | GAGGAG | 8 cut(s) | 165, 377, 717, 765, 795, 834, 1839, 2304 |
| BseSI | GKGCMC | 1 cut(s) | 3321 |
| BseXI | GCAGC | 4 cut(s) | 670, 970, 3295, 3607 |
| BsgI | GTGCAG | 4 cut(s) | 555, 648, 975, 3594 |
| Bsh1236I | CGCG | 3 cut(s) | 720, 732, 2569 |
| BshNI | GGYRCC | 3 cut(s) | 2682, 2740, 3524 |
| BshVI | ATCGAT | 1 cut(s) | 915 |
| BsiHKAI | GWGCWC | 2 cut(s) | 727, 844 |
| BsiSI | CCGG | 5 cut(s) | 1001, 1351, 2894, 3352, 4024 |
| BslFI | GGGAC | 3 cut(s) | 1083, 1536, 4040 |
| BsmBI | CGTCTC | 7 cut(s) | 389, 974, 1002, 1983, 2068, 3180, 3935 |
| BsmFI | GGGAC | 3 cut(s) | 1083, 1536, 4040 |
| BsmI | GAATGC | 2 cut(s) | 1447, 1872 |
| Bso31I | GGTCTC | 2 cut(s) | 1922, 3084 |
| Bsp119I | TTCGAA | 2 cut(s) | 2587, 3800 |
| Bsp120I | GGGCCC | 1 cut(s) | 3317 |
| Bsp1286I | GDGCHC | 4 cut(s) | 672, 727, 844, 3321 |
| Bsp19I | CCATGG | 2 cut(s) | 1399, 2691 |
| BspACI | CCGC | 6 cut(s) | 720, 732, 1008, 3756, 3839, 4117 |
| BspCNI | CTCAG | 5 cut(s) | 382, 433, 1897, 3283, 3506 |
| BspDI | ATCGAT | 1 cut(s) | 915 |
| BspFNI | CGCG | 3 cut(s) | 720, 732, 2569 |
| BspHI | TCATGA | 1 cut(s) | 823 |
| BspLI | GGNNCC | 7 cut(s) | 163, 1051, 2684, 2742, 2812, 3319, 3526 |
| BspMAI | CTGCAG | 2 cut(s) | 3031, 3625 |
| BspMI | ACCTGC | 2 cut(s) | 2527, 3034 |
| BspPI | GGATC | 7 cut(s) | 90, 281, 1147, 2231, 2395, 3035, 3508 |
| BspQI | GCTCTTC | 2 cut(s) | 621, 2943 |
| BspT104I | TTCGAA | 2 cut(s) | 2587, 3800 |
| BspT107I | GGYRCC | 3 cut(s) | 2682, 2740, 3524 |
| BspTI | CTTAAG | 1 cut(s) | 2168 |
| BspTNI | GGTCTC | 2 cut(s) | 1922, 3084 |
| BsrDI | GCAATG | 2 cut(s) | 3309, 3954 |
| BssECI | CCNNGG | 7 cut(s) | 712, 739, 760, 1399, 1555, 2691, 4098 |
| BssNI | GRCGYC | 7 cut(s) | 5, 637, 2061, 2683, 3356, 3426, 3525 |
| BssT1I | CCWWGG | 4 cut(s) | 1399, 1555, 2691, 4098 |
| Bst2UI | CCWGG | 3 cut(s) | 702, 791, 3793 |
| Bst6I | CTCTTC | 5 cut(s) | 51, 621, 685, 2943, 3185 |
| BstACI | GRCGYC | 7 cut(s) | 5, 637, 2061, 2683, 3356, 3426, 3525 |
| BstAFI | CTTAAG | 1 cut(s) | 2168 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3107 |
| BstBAI | YACGTR | 1 cut(s) | 353 |
| BstBI | TTCGAA | 2 cut(s) | 2587, 3800 |
| BstC8I | GCNNGC | 7 cut(s) | 108, 202, 546, 1773, 2833, 3988, 3992 |
| BstDEI | CTNAG | 7 cut(s) | 369, 441, 1886, 1905, 2197, 3270, 3493 |
| BstDSI | CCRYGG | 5 cut(s) | 712, 739, 760, 1399, 2691 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 732 |
| BstFNI | CGCG | 3 cut(s) | 720, 732, 2569 |
| BstH2I | RGCGCY | 3 cut(s) | 2686, 3528, 3954 |
| BstHHI | GCGC | 4 cut(s) | 2685, 3527, 3953, 3996 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 611, 683, 983, 989, 3107, 3164, 3617, 3762 |
| BstNI | CCWGG | 3 cut(s) | 702, 791, 3793 |
| BstNSI | RCATGY | 4 cut(s) | 110, 2652, 2909, 3994 |
| BstSCI | CCNGG | 5 cut(s) | 700, 789, 3350, 3791, 4023 |
| BstSFI | CTRYAG | 3 cut(s) | 3027, 3404, 3621 |
| BstSLI | GKGCMC | 1 cut(s) | 3321 |
| BstUI | CGCG | 3 cut(s) | 720, 732, 2569 |
| BstV1I | GCAGC | 4 cut(s) | 670, 970, 3295, 3607 |
| BstV2I | GAAGAC | 2 cut(s) | 2030, 2745 |
| BstX2I | RGATCY | 2 cut(s) | 3310, 3500 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 866, 2778 |
| BstYI | RGATCY | 2 cut(s) | 3310, 3500 |
| Bsu15I | ATCGAT | 1 cut(s) | 915 |
| BsuI | GTATCC | 1 cut(s) | 884 |
| BsuTUI | ATCGAT | 1 cut(s) | 915 |
| BtgI | CCRYGG | 5 cut(s) | 712, 739, 760, 1399, 2691 |
| BtrI | CACGTC | 3 cut(s) | 953, 968, 3551 |
| BtsI | GCAGTG | 6 cut(s) | 672, 1219, 3153, 3460, 3520, 3760 |
| BveI | ACCTGC | 2 cut(s) | 2527, 3034 |
| Cac8I | GCNNGC | 7 cut(s) | 108, 202, 546, 1773, 2833, 3988, 3992 |
| CciI | TCATGA | 1 cut(s) | 823 |
| CfoI | GCGC | 4 cut(s) | 2685, 3527, 3953, 3996 |
| Cfr13I | GGNCC | 6 cut(s) | 542, 704, 1318, 2344, 3317, 3318 |
| ClaI | ATCGAT | 1 cut(s) | 915 |
| CseI | GACGC | 7 cut(s) | 1965, 2012, 2050, 3008, 3364, 3434, 3722 |
| Csp6I | GTAC | 4 cut(s) | 87, 558, 2721, 2741 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 283, 318 |
| CviQI | GTAC | 4 cut(s) | 87, 558, 2721, 2741 |
| DdeI | CTNAG | 7 cut(s) | 369, 441, 1886, 1905, 2197, 3270, 3493 |
| DinI | GGCGCC | 2 cut(s) | 2684, 3526 |
| DraI | TTTAAA | 4 cut(s) | 531, 1725, 1849, 2827 |
| DraIII | CACNNNGTG | 1 cut(s) | 3107 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1890 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1890 |
| EaeI | YGGCCR | 6 cut(s) | 202, 379, 757, 763, 868, 901 |
| Eam1104I | CTCTTC | 5 cut(s) | 51, 621, 685, 2943, 3185 |
| EarI | CTCTTC | 5 cut(s) | 51, 621, 685, 2943, 3185 |
| EciI | GGCGGA | 2 cut(s) | 997, 3854 |
| Eco130I | CCWWGG | 4 cut(s) | 1399, 1555, 2691, 4098 |
| Eco24I | GRGCYC | 2 cut(s) | 672, 3321 |
| Eco31I | GGTCTC | 2 cut(s) | 1922, 3084 |
| Eco47I | GGWCC | 3 cut(s) | 704, 1318, 2344 |
| Eco57I | CTGAAG | 1 cut(s) | 2872 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 732 |
| EcoO109I | RGGNCCY | 3 cut(s) | 704, 1318, 3318 |
| EcoRI | GAATTC | 2 cut(s) | 2583, 2702 |
| EcoRII | CCWGG | 3 cut(s) | 700, 789, 3791 |
| EcoT14I | CCWWGG | 4 cut(s) | 1399, 1555, 2691, 4098 |
| EcoT22I | ATGCAT | 3 cut(s) | 241, 1711, 2192 |
| EcoT38I | GRGCYC | 2 cut(s) | 672, 3321 |
| EgeI | GGCGCC | 2 cut(s) | 2684, 3526 |
| EheI | GGCGCC | 2 cut(s) | 2684, 3526 |
| ErhI | CCWWGG | 4 cut(s) | 1399, 1555, 2691, 4098 |
| Esp3I | CGTCTC | 7 cut(s) | 389, 974, 1002, 1983, 2068, 3180, 3935 |
| FaqI | GGGAC | 3 cut(s) | 1083, 1536, 4040 |
| FbaI | TGATCA | 2 cut(s) | 2562, 3661 |
| FblI | GTMKAC | 2 cut(s) | 374, 3067 |
| Fnu4HI | GCNGC | 4 cut(s) | 684, 984, 3284, 3621 |
| FriOI | GRGCYC | 2 cut(s) | 672, 3321 |
| Fsp4HI | GCNGC | 4 cut(s) | 684, 984, 3284, 3621 |
| FspBI | CTAG | 5 cut(s) | 1452, 1518, 2837, 3137, 3828 |
| GlaI | GCGC | 4 cut(s) | 2684, 3526, 3952, 3995 |
| GluI | GCNGC | 4 cut(s) | 684, 984, 3284, 3621 |
| GsuI | CTGGAG | 2 cut(s) | 1068, 3814 |
| HaeII | RGCGCY | 3 cut(s) | 2686, 3528, 3954 |
| HapII | CCGG | 5 cut(s) | 1001, 1351, 2894, 3352, 4024 |
| HgaI | GACGC | 7 cut(s) | 1965, 2012, 2050, 3008, 3364, 3434, 3722 |
| HhaI | GCGC | 4 cut(s) | 2685, 3527, 3953, 3996 |
| Hin1I | GRCGYC | 7 cut(s) | 5, 637, 2061, 2683, 3356, 3426, 3525 |
| Hin6I | GCGC | 4 cut(s) | 2683, 3525, 3951, 3994 |
| HinP1I | GCGC | 4 cut(s) | 2683, 3525, 3951, 3994 |
| HincII | GTYRAC | 7 cut(s) | 1396, 2391, 2576, 3023, 3068, 3574, 3851 |
| HindII | GTYRAC | 7 cut(s) | 1396, 2391, 2576, 3023, 3068, 3574, 3851 |
| HindIII | AAGCTT | 2 cut(s) | 975, 1769 |
| HpaII | CCGG | 5 cut(s) | 1001, 1351, 2894, 3352, 4024 |
| HphI | GGTGA | 5 cut(s) | 437, 1057, 2474, 3175, 3494 |
| Hpy188III | TCNNGA | 8 cut(s) | 187, 227, 449, 824, 1047, 1316, 1904, 3554 |
| Hpy99I | CGWCG | 2 cut(s) | 897, 3078 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 611, 683, 983, 989, 3107, 3164, 3617, 3762 |
| HpyF3I | CTNAG | 7 cut(s) | 369, 441, 1886, 1905, 2197, 3270, 3493 |
| Hsp92I | GRCGYC | 7 cut(s) | 5, 637, 2061, 2683, 3356, 3426, 3525 |
| HspAI | GCGC | 4 cut(s) | 2683, 3525, 3951, 3994 |
| KasI | GGCGCC | 2 cut(s) | 2682, 3524 |
| KpnI | GGTACC | 1 cut(s) | 2744 |
| Ksp22I | TGATCA | 2 cut(s) | 2562, 3661 |
| LguI | GCTCTTC | 2 cut(s) | 621, 2943 |
| LmnI | GCTCC | 7 cut(s) | 730, 808, 847, 967, 1049, 2317, 3397 |
| Lsp1109I | GCAGC | 4 cut(s) | 670, 970, 3295, 3607 |
| LweI | GCATC | 9 cut(s) | 187, 226, 244, 1013, 1032, 1326, 1426, 2799, 3642 |
| MaeI | CTAG | 5 cut(s) | 1452, 1518, 2837, 3137, 3828 |
| MfeI | CAATTG | 1 cut(s) | 392 |
| MflI | RGATCY | 2 cut(s) | 3310, 3500 |
| MhlI | GDGCHC | 4 cut(s) | 672, 727, 844, 3321 |
| MlsI | TGGCCA | 2 cut(s) | 204, 765 |
| MluI | ACGCGT | 1 cut(s) | 2567 |
| MluNI | TGGCCA | 2 cut(s) | 204, 765 |
| Mly113I | GGCGCC | 2 cut(s) | 2683, 3525 |
| MlyI | GAGTC | 5 cut(s) | 500, 1037, 1413, 2465, 3164 |
| MmeI | TCCRAC | 8 cut(s) | 60, 84, 878, 1413, 2322, 2342, 2441, 3626 |
| Mox20I | TGGCCA | 2 cut(s) | 204, 765 |
| Mph1103I | ATGCAT | 3 cut(s) | 241, 1711, 2192 |
| MscI | TGGCCA | 2 cut(s) | 204, 765 |
| MslI | CAYNNNNRTG | 3 cut(s) | 423, 1629, 3224 |
| Msp20I | TGGCCA | 2 cut(s) | 204, 765 |
| MspCI | CTTAAG | 1 cut(s) | 2168 |
| MspI | CCGG | 5 cut(s) | 1001, 1351, 2894, 3352, 4024 |
| MspR9I | CCNGG | 5 cut(s) | 702, 791, 3352, 3793, 4025 |
| MunI | CAATTG | 1 cut(s) | 392 |
| Mva1269I | GAATGC | 2 cut(s) | 1447, 1872 |
| MvaI | CCWGG | 3 cut(s) | 702, 791, 3793 |
| MvnI | CGCG | 3 cut(s) | 720, 732, 2569 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 611, 683, 983, 989, 3107, 3164, 3617, 3762 |
| NarI | GGCGCC | 2 cut(s) | 2683, 3525 |
| NciI | CCSGG | 2 cut(s) | 3352, 4025 |
| NcoI | CCATGG | 2 cut(s) | 1399, 2691 |
| NlaIV | GGNNCC | 7 cut(s) | 163, 1051, 2684, 2742, 2812, 3319, 3526 |
| NmuCI | GTSAC | 7 cut(s) | 353, 743, 896, 2899, 3758, 3819, 3938 |
| NsiI | ATGCAT | 3 cut(s) | 241, 1711, 2192 |
| NspI | RCATGY | 4 cut(s) | 110, 2652, 2909, 3994 |
| NspV | TTCGAA | 2 cut(s) | 2587, 3800 |
| PaeI | GCATGC | 2 cut(s) | 110, 3994 |
| PagI | TCATGA | 1 cut(s) | 823 |
| PciI | ACATGT | 1 cut(s) | 2648 |
| PciSI | GCTCTTC | 2 cut(s) | 621, 2943 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 736, 1933 |
| PctI | GAATGC | 2 cut(s) | 1447, 1872 |
| PfeI | GAWTC | 5 cut(s) | 244, 428, 646, 1078, 2159 |
| PflFI | GACNNNGTC | 3 cut(s) | 2323, 2348, 4031 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2692 |
| PfoI | TCCNGGA | 4 cut(s) | 700, 3350, 3791, 4023 |
| PkrI | GCNGC | 4 cut(s) | 685, 985, 3285, 3622 |
| PleI | GAGTC | 5 cut(s) | 500, 1037, 1412, 2465, 3164 |
| PluTI | GGCGCC | 2 cut(s) | 2686, 3528 |
| PpsI | GAGTC | 5 cut(s) | 500, 1037, 1412, 2465, 3164 |
| Ppu21I | YACGTR | 1 cut(s) | 353 |
| PpuMI | RGGWCCY | 2 cut(s) | 704, 1318 |
| PscI | ACATGT | 1 cut(s) | 2648 |
| PshBI | ATTAAT | 5 cut(s) | 459, 1254, 1619, 1659, 2031 |
| PsiI | TTATAA | 1 cut(s) | 2226 |
| Psp1406I | AACGTT | 1 cut(s) | 2622 |
| Psp5II | RGGWCCY | 2 cut(s) | 704, 1318 |
| Psp6I | CCWGG | 3 cut(s) | 700, 789, 3791 |
| PspGI | CCWGG | 3 cut(s) | 700, 789, 3791 |
| PspN4I | GGNNCC | 7 cut(s) | 163, 1051, 2684, 2742, 2812, 3319, 3526 |
| PspOMI | GGGCCC | 1 cut(s) | 3317 |
| PspPI | GGNCC | 6 cut(s) | 542, 704, 1318, 2344, 3317, 3318 |
| PspPPI | RGGWCCY | 2 cut(s) | 704, 1318 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 310, 342 |
| PstI | CTGCAG | 2 cut(s) | 3031, 3625 |
| PsuI | RGATCY | 2 cut(s) | 3310, 3500 |
| PsyI | GACNNNGTC | 3 cut(s) | 2323, 2348, 4031 |
| RsaI | GTAC | 4 cut(s) | 88, 559, 2722, 2742 |
| RsaNI | GTAC | 4 cut(s) | 87, 558, 2721, 2741 |
| RseI | CAYNNNNRTG | 3 cut(s) | 423, 1629, 3224 |
| SalI | GTCGAC | 1 cut(s) | 3066 |
| SapI | GCTCTTC | 2 cut(s) | 621, 2943 |
| SatI | GCNGC | 4 cut(s) | 684, 984, 3284, 3621 |
| Sau96I | GGNCC | 6 cut(s) | 542, 704, 1318, 2344, 3317, 3318 |
| SbfI | CCTGCAGG | 1 cut(s) | 3031 |
| ScaI | AGTACT | 1 cut(s) | 559 |
| SchI | GAGTC | 5 cut(s) | 500, 1037, 1413, 2465, 3164 |
| ScrFI | CCNGG | 5 cut(s) | 702, 791, 3352, 3793, 4025 |
| SdaI | CCTGCAGG | 1 cut(s) | 3031 |
| SduI | GDGCHC | 4 cut(s) | 672, 727, 844, 3321 |
| SfaNI | GCATC | 9 cut(s) | 187, 226, 244, 1013, 1032, 1326, 1426, 2799, 3642 |
| SfcI | CTRYAG | 3 cut(s) | 3027, 3404, 3621 |
| SfoI | GGCGCC | 2 cut(s) | 2684, 3526 |
| SfuI | TTCGAA | 2 cut(s) | 2587, 3800 |
| SinI | GGWCC | 3 cut(s) | 704, 1318, 2344 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 423, 1629, 3224 |
| SmlI | CTYRAG | 4 cut(s) | 2168, 2502, 3162, 3466 |
| SmoI | CTYRAG | 4 cut(s) | 2168, 2502, 3162, 3466 |
| SpeI | ACTAGT | 1 cut(s) | 1517 |
| SphI | GCATGC | 2 cut(s) | 110, 3994 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 3031 |
| SsiI | CCGC | 6 cut(s) | 720, 732, 1008, 3756, 3839, 4117 |
| SspDI | GGCGCC | 2 cut(s) | 2682, 3524 |
| SspMI | CTAG | 5 cut(s) | 1452, 1518, 2837, 3137, 3828 |
| StyD4I | CCNGG | 5 cut(s) | 700, 789, 3350, 3791, 4023 |
| StyI | CCWWGG | 4 cut(s) | 1399, 1555, 2691, 4098 |
| TaqI | TCGA | 8 cut(s) | 915, 2176, 2300, 2587, 2817, 3067, 3073, 3800 |
| TatI | WGTACW | 1 cut(s) | 557 |
| TfiI | GAWTC | 5 cut(s) | 244, 428, 646, 1078, 2159 |
| TseFI | GTSAC | 7 cut(s) | 353, 743, 896, 2899, 3758, 3819, 3938 |
| TseI | GCWGC | 4 cut(s) | 683, 983, 3283, 3620 |
| Tsp45I | GTSAC | 7 cut(s) | 353, 743, 896, 2899, 3758, 3819, 3938 |
| TspGWI | ACGGA | 3 cut(s) | 1152, 2328, 3887 |
| Tth111I | GACNNNGTC | 3 cut(s) | 2323, 2348, 4031 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2692 |
| Vha464I | CTTAAG | 1 cut(s) | 2168 |
| VpaK11BI | GGWCC | 3 cut(s) | 704, 1318, 2344 |
| VspI | ATTAAT | 5 cut(s) | 459, 1254, 1619, 1659, 2031 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 732 |
| XapI | RAATTY | 6 cut(s) | 139, 1083, 1802, 2049, 2583, 2702 |
| XceI | RCATGY | 4 cut(s) | 110, 2652, 2909, 3994 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 3391, 3749, 3930 |
| XmiI | GTMKAC | 2 cut(s) | 374, 3067 |
| XspI | CTAG | 5 cut(s) | 1452, 1518, 2837, 3137, 3828 |
| ZraI | GACGTC | 1 cut(s) | 638 |
| ZrmI | AGTACT | 1 cut(s) | 559 |
| Zsp2I | ATGCAT | 3 cut(s) | 241, 1711, 2192 |