RchiOBHm_Chr3g0454851
RLK Family

cysteine-rich RLK (RECEPTOR-like protein kinase) 8

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
4775772 .. 4779054
3283 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ42184

Sequence Viewer

Length: 3075 bp
ATGAAGATCCCACTGAATCCCTCTGGTACATTGACAGTGGTGCTACAAACCACATTACCTCTGATCTCGCCAACCTCAACATTCACAATGAGTACTCGGGTCCTGATCAAGTTTCTGTTGCTAATGGCCAAGGATCTTCCGTCGGGGAAAGTTCTTTTTCACGGGCCATGTAATGGTAGTCTCTTCCCCATCCGCCTCAAGAAGTCTTTACCTCAGTCGTCAACTCAGCCATCCACTCCATCAGTTTTGTTCACATCTGCATCCTCCACCACTTGGCACAAGCGTCTCGGTCATCCCTCCCCTCAAGCTCTTCGTCGTCTTGTCTCGCATCATCAGTTAAATGTTTTATGTTCTAGTAGTCCTCCACCTTTGTGTTCAGATTGTCAATTAGGCAGGCGCTCCAAACTTCCTTTTGTAAACTCATCTTGTACTACCACTGCACCTTTGCAGATCATCCATTCTGATGTTTGGGGCCCGACCTCCATTTTATCTGTTAGTGGATTTAAGTATTATGTTCTCTTTATTGACGACTGGTCTCGCTTCACCTGGTTGTTTCCTTTGCATTGCAAATCTGAAGTTTTCCACTCATTTCAAAAATTCAAACTGCTTGTTGAAAATCAATTTGATACAAAAATCAAATCTTTACGGTGTGACAATGGTGGTGAATACACTAGTGCTGTTTTTCAATCTTTTTTGTCTAACAATGGCATTGCTCAACAATTCTCATGCCCACACACACCAGAACAAAATGGAATGGCAGAGAGAAAACACCGACATTTAATTGAACTAACTCGAACTCTATTTGCGCAGTCTTCGCTGCCATTCAAATACTGGGTTGAGATTGTTCAAACATCAGTTTATTTAATCAATAGGTTGCCTTCCTCCTCCCTGCATTTCATCTCTCCTTTTGAACAATTATTCAACACTGCACCAGACTATAATTTTTTACGAGCATATGGGTGTTTGTGTTTTCCTTGGTTAAAACCATATGCTGCTCATAAGCTTGATTTTCGGAGTCGCAAGTGTGTTTTTCTTGGTTATAGTCTTTATCAAAAAGGCTATAGGTGCTTAGACCCCACAAATGGAAGAGTTTATGTGTCTCGACATGTCATATTTGATGAAAACACTTTTCCATTCAAAGAGAAACTCTCTGCCCCACAACCTGCCAACCCACCTCCAATCCCATCCTATCCTATCCTATTACCTTTGCCTCCCTCTTTATCGGAACCCACACCTAATATAATTCAGCCGACCACTCCCACCAATCCTACTTTATCCCTATCTCCACCACCTTCACCCTCCCCCATACAAACCCCTCCCATTACACAACTCACTTCCCCTCCGCATCCTCCTCCTCCCACGAGATCAAGGCAACATCCTCCACCTGGTCCCCCTTCCCACAACATGCAAACTCGCTCCAAAAATAATATATTTAAGCCTAAAGCTTTTTCTACAAAACACCAGTTCACTAGTGCTTTCCTCACCACTCCTTCCCAACTACCCAGTACTTATCTACAAGCATCAAAAGATCCAAAGTGGGTTACTGCCATGTGTGATGAAATTTTTGCACTTCACCGATCTGGTACATGGGTATTAGTCCCTCCCCATCCCTCCCACAATGTTGTTGGTTGCAGGTGGATTTTTCGCATCAAATATCGAGCTGATGGTTCTATTGATCGATATAAAGCTCGTTTGGTAGCCAAAGGTTTTACTCAACAAGCTGGTTTAGACTACTCTAAGACATTTAGTCATGTTGCCAAGCCTGCTACTATTCGGGTTGTCTTATCGTTAGCTGTCCAAAATGATTGGACCATCTCTCAACTTGATGTCTCTAACGCGTTCTTGCATGGCCATCTCACAGAGGATGTCTTCATGGCCCAACCACCTGGTTTCGTGGATTCTACTAAGCCCAGTTATGTTTGTCAATTGAAGAAATCCCTTTATGGGTTGAAGCAGGCTCCTCGGGCCTGGTATGAAGCTCTTTATCAATGTCTTCTCACTTTGGGCTTCTCTGCTTCTCTTGCTGACCCATCGCTATTTGTCAAGCATGATCAACACACCACATTTCTTTTAGTCTACGTAGATGACATTGTGCTTACTGGAAGTTGCCCACTTCATTGTCAATCTCTCATCCAGCAACTAAGTCAACGTTTTGCAATTAAAGACCTAGGAGCCTTACACTATTTTTTGGGATTGGAAGTTCAGCGCAGCAGTGACTCTCTCTACTTGTGTCAATCCAAATACACACATGATCTGCTCTCCAAATTCAACATGCTTGGTGTCAAGCCAAATGCTTCCCCTGAAAGTTCCTCCAAACTTGACAGTCACTCTGGTGAGCCGCTCTCTGATCCTTCTACTTATCGGTCTATGGTGGGTGCTCTTCAATATTTGACATGGACGCGACCGGACATTGCTCATGCAGTTAATCAGGTTTGCCAGCATATGCACAATCCTCGTACTCCACATCTCACTGCTGTCAAACGCATTTTTCGGTATCTTAAAGGGACCCCTGATCAAGGTCTTCATTTTACTAAAGGTCCCTCCGCTCTCACTATTTTCTCAGATGCAGATTGGGCTGGGTGCCCCATTGATCGTCGCTCAACTACTAGTTATTGTGTGTTTCTGGGCAGCAACTTAATCTCATGGAGTGCTAAGAAGCAATCATCTGTTTCTCGCTCTTCCACCGAAGCAGAGTATCGAGCTCTAGCCTTATCAGTCGCTGAAGTTCTATGGCTGTGTTTTCTCTTCCGTGATCTCAAGGTGTTTCTTGGACAGCCCCCTTTGTTCTACTGTGACAATATCTCTGCCATTGCATTAGCTGCAAACCCTATTTTTCACAATCGCACGAAGCATGTAGCTGTGGATTATCACTTCATCAGAGAACCTCTAGCCAACAAATCGCTGCAGCTTCACCATGTTTCATCAGCTGCAAACGTTGCCGATATATTCACAAAGAGTCTTCCTAAACATCGGTTCCTTGATCTCTGTTCCAAGCTGATTGTGCGCATCCCACTCATCAGCTTGCGGGGGCGTAATAAAGATATGAGCACTGAGGAGACCACTCGTGCTCAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1024

Amino Acids

114.93

Weight (kDa)

9.5

Isoelectric Point (pI)

47.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
gag_pre-integrs PF13976 72 - 131 2.9e-10 GAG-pre-integrase domain
rve PF00665 146 - 247 1.4e-11 Integrase core domain
SH3_retrovirus PF25597 321 - 382 3.7e-25 Retroviral polymerase SH3-like domain
RVT_2 PF07727 529 - 767 1.5e-62 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1623
Acc16I TGCGCA 2 cut(s) 807, 3005
Acc36I ACCTGC 2 cut(s) 1171, 1623
AccB1I GGYRCC 1 cut(s) 2580
AccB7I CCANNNNNTGG 2 cut(s) 173, 273
AccBSI CCGCTC 2 cut(s) 2341, 2546
AccI GTMKAC 1 cut(s) 2076
AccII CGCG 2 cut(s) 1838, 2401
AciI CCGC 5 cut(s) 193, 1343, 2339, 2544, 3025
AclI AACGTT 2 cut(s) 2149, 2934
AclWI GGATC 3 cut(s) 141, 1523, 2342
AcoI YGGCCR 2 cut(s) 126, 1849
AcsI RAATTY 3 cut(s) 596, 1560, 2264
AcuI CTGAAG 2 cut(s) 594, 2742
AfaI GTAC 6 cut(s) 28, 94, 430, 1507, 1585, 2458
AfiI CCNNNNNNNGG 6 cut(s) 173, 273, 1082, 1385, 1944, 2516
AflIII ACRYGT 2 cut(s) 1105, 1836
AhdI GACNNNNNGTC 2 cut(s) 532, 1746
AhlI ACTAGT 3 cut(s) 671, 1469, 2606
AjnI CCWGG 4 cut(s) 545, 1384, 1885, 1967
AleI CACNNNNGTG 2 cut(s) 370, 2331
AloI GAACNNNNNNTCC 2 cut(s) 2184, 2216
Alw21I GWGCWC 4 cut(s) 2380, 2704, 3050, 3070
Alw26I GTCTC 7 cut(s) 185, 290, 328, 540, 1104, 1834, 3050
AlwI GGATC 3 cut(s) 141, 1523, 2342
AlwNI CAGNNNCTG 1 cut(s) 2720
Ama87I CYCGRG 2 cut(s) 96, 1962
AoxI GGCC 6 cut(s) 126, 164, 472, 1849, 1875, 1965
ApaI GGGCCC 1 cut(s) 476
ApeKI GCWGC 8 cut(s) 817, 992, 2208, 2628, 2819, 2902, 2905, 2927
ApoI RAATTY 3 cut(s) 596, 1560, 2264
AspA2I CCTAGG 1 cut(s) 2167
AspLEI GCGC 4 cut(s) 399, 808, 2208, 3006
AsuHPI GGTGA 7 cut(s) 535, 674, 1287, 1474, 1565, 2345, 2903
AvaI CYCGRG 2 cut(s) 96, 1962
AvaII GGWCC 5 cut(s) 100, 1388, 1809, 2505, 2537
AvrII CCTAGG 1 cut(s) 2167
BaeGI GKGCMC 2 cut(s) 476, 2585
BaeI ACNNNNGTAYC 2 cut(s) 1575, 1608
BalI TGGCCA 2 cut(s) 128, 1851
BanI GGYRCC 1 cut(s) 2580
BanII GRGCYC 2 cut(s) 476, 2704
BauI CACGAG 2 cut(s) 1360, 3063
BbsI GAAGAC 5 cut(s) 804, 1861, 1985, 2513, 2951
Bbv12I GWGCWC 4 cut(s) 2380, 2704, 3050, 3070
BbvI GCAGC 8 cut(s) 804, 979, 2220, 2640, 2806, 2889, 2914, 2917
BccI CCATC 9 cut(s) 197, 238, 247, 1192, 1614, 1658, 1820, 1860, 2038
BcgI CGANNNNNNTGC 4 cut(s) 1943, 1977, 2435, 2469
BciT130I CCWGG 4 cut(s) 547, 1386, 1887, 1969
BclI TGATCA 3 cut(s) 105, 2050, 2512
BcoDI GTCTC 7 cut(s) 185, 290, 328, 540, 1104, 1834, 3050
BcuI ACTAGT 3 cut(s) 671, 1469, 2606
BfaI CTAG 7 cut(s) 354, 672, 1470, 2168, 2607, 2705, 2888
BfmI CTRYAG 2 cut(s) 1060, 2903
BfoI RGCGCY 1 cut(s) 400
BfuAI ACCTGC 2 cut(s) 1171, 1623
BisI GCNGC 9 cut(s) 818, 993, 2209, 2339, 2629, 2820, 2903, 2906, 2928
BlnI CCTAGG 1 cut(s) 2167
BlsI GCNGC 9 cut(s) 819, 994, 2210, 2340, 2630, 2821, 2904, 2907, 2929
BmcAI AGTACT 2 cut(s) 94, 1507
Bme1390I CCNGG 4 cut(s) 547, 1386, 1887, 1969
Bme18I GGWCC 5 cut(s) 100, 1388, 1809, 2505, 2537
BmeRI GACNNNNNGTC 2 cut(s) 532, 1746
BmeT110I CYCGRG 2 cut(s) 96, 1962
BmrFI CCNGG 4 cut(s) 547, 1386, 1887, 1969
BmrI ACTGGG 3 cut(s) 841, 1497, 1905
BmsI GCATC 7 cut(s) 269, 337, 1354, 1529, 1656, 2554, 3015
BmuI ACTGGG 3 cut(s) 841, 1497, 1905
BpiI GAAGAC 5 cut(s) 804, 1861, 1985, 2513, 2951
BplI GAGNNNNNCTC 4 cut(s) 1133, 1165, 2327, 2359
BpuEI CTTGAG 3 cut(s) 182, 288, 2741
Bsa29I ATCGAT 1 cut(s) 1678
BsaAI YACGTR 1 cut(s) 2080
BsaI GGTCTC 2 cut(s) 540, 3050
BsaJI CCNNGG 4 cut(s) 129, 974, 1961, 2167
BsaWI WCCGGW 1 cut(s) 2404
BsaXI ACNNNNNCTCC 2 cut(s) 1324, 1354
Bsc4I CCNNNNNNNGG 6 cut(s) 173, 273, 1082, 1385, 1944, 2516
Bse1I ACTGG 6 cut(s) 536, 836, 1462, 1503, 1911, 2104
Bse3DI GCAATG 4 cut(s) 562, 708, 2409, 2808
BseBI CCWGG 4 cut(s) 547, 1386, 1887, 1969
BseCI ATCGAT 1 cut(s) 1678
BseDI CCNNGG 4 cut(s) 129, 974, 1961, 2167
BseLI CCNNNNNNNGG 6 cut(s) 173, 273, 1082, 1385, 1944, 2516
BseMI GCAATG 4 cut(s) 562, 708, 2409, 2808
BseMII CTCAG 4 cut(s) 227, 239, 2574, 3042
BseNI ACTGG 6 cut(s) 536, 836, 1462, 1503, 1911, 2104
BseRI GAGGAG 5 cut(s) 874, 1341, 1344, 1950, 3068
BseSI GKGCMC 2 cut(s) 476, 2585
BseXI GCAGC 8 cut(s) 804, 979, 2220, 2640, 2806, 2889, 2914, 2917
BseYI CCCAGC 1 cut(s) 2576
BsgI GTGCAG 2 cut(s) 423, 912
Bsh1236I CGCG 2 cut(s) 1838, 2401
Bsh1285I CGRYCG 1 cut(s) 2405
BshFI GGCC 6 cut(s) 128, 166, 474, 1851, 1877, 1967
BshNI GGYRCC 1 cut(s) 2580
BshVI ATCGAT 1 cut(s) 1678
BsiEI CGRYCG 1 cut(s) 2405
BsiHKAI GWGCWC 4 cut(s) 2380, 2704, 3050, 3070
BsiHKCI CYCGRG 2 cut(s) 96, 1962
BsiSI CCGG 1 cut(s) 2405
BslFI GGGAC 4 cut(s) 1374, 1583, 2518, 2523
BslI CCNNNNNNNGG 6 cut(s) 173, 273, 1082, 1385, 1944, 2516
BsmAI GTCTC 7 cut(s) 185, 290, 328, 540, 1104, 1834, 3050
BsmBI CGTCTC 1 cut(s) 290
BsmFI GGGAC 4 cut(s) 1374, 1583, 2518, 2523
BsnI GGCC 6 cut(s) 128, 166, 474, 1851, 1877, 1967
Bso31I GGTCTC 2 cut(s) 540, 3050
BsoBI CYCGRG 2 cut(s) 96, 1962
Bsp120I GGGCCC 1 cut(s) 472
Bsp1286I GDGCHC 6 cut(s) 476, 2380, 2585, 2704, 3050, 3070
BspACI CCGC 5 cut(s) 193, 1343, 2339, 2544, 3025
BspANI GGCC 6 cut(s) 128, 166, 474, 1851, 1877, 1967
BspCNI CTCAG 4 cut(s) 226, 238, 2573, 3043
BspDI ATCGAT 1 cut(s) 1678
BspFNI CGCG 2 cut(s) 1838, 2401
BspMAI CTGCAG 1 cut(s) 2907
BspMI ACCTGC 2 cut(s) 1171, 1623
BspPI GGATC 3 cut(s) 141, 1523, 2342
BspQI GCTCTTC 3 cut(s) 315, 2385, 2683
BspT107I GGYRCC 1 cut(s) 2580
BspTNI GGTCTC 2 cut(s) 540, 3050
BsrBI CCGCTC 2 cut(s) 2341, 2546
BsrDI GCAATG 4 cut(s) 562, 708, 2409, 2808
BsrI ACTGG 6 cut(s) 536, 836, 1462, 1503, 1911, 2104
BssECI CCNNGG 4 cut(s) 129, 974, 1961, 2167
BssSI CACGAG 2 cut(s) 1360, 3063
BssT1I CCWWGG 3 cut(s) 129, 974, 2167
Bst2BI CACGAG 2 cut(s) 1360, 3063
Bst2UI CCWGG 4 cut(s) 547, 1386, 1887, 1969
Bst4CI ACNGT 4 cut(s) 37, 648, 2324, 2792
Bst6I CTCTTC 6 cut(s) 188, 315, 1081, 2385, 2683, 2750
BstAPI GCANNNNNTGC 2 cut(s) 2819, 2936
BstBAI YACGTR 1 cut(s) 2080
BstC8I GCNNGC 5 cut(s) 395, 1764, 1956, 2438, 3023
BstDEI CTNAG 9 cut(s) 213, 225, 1069, 1737, 1905, 2141, 2560, 2652, 3051
BstENI CCTNNNNNAGG 1 cut(s) 2514
BstFNI CGCG 2 cut(s) 1838, 2401
BstH2I RGCGCY 1 cut(s) 400
BstHHI GCGC 4 cut(s) 399, 808, 2208, 3006
BstMAI GTCTC 7 cut(s) 185, 290, 328, 540, 1104, 1834, 3050
BstMCI CGRYCG 1 cut(s) 2405
BstMWI GCNNNNNNNGC 9 cut(s) 814, 1065, 1763, 1964, 2021, 2573, 2819, 2936, 3001
BstNI CCWGG 4 cut(s) 547, 1386, 1887, 1969
BstNSI RCATGY 4 cut(s) 1109, 1408, 2275, 2855
BstSCI CCNGG 4 cut(s) 545, 1384, 1885, 1967
BstSFI CTRYAG 2 cut(s) 1060, 2903
BstSLI GKGCMC 2 cut(s) 476, 2585
BstSNI TACGTA 1 cut(s) 2080
BstUI CGCG 2 cut(s) 1838, 2401
BstV1I GCAGC 8 cut(s) 804, 979, 2220, 2640, 2806, 2889, 2914, 2917
BstV2I GAAGAC 5 cut(s) 804, 1861, 1985, 2513, 2951
BstX2I RGATCY 3 cut(s) 6, 133, 1528
BstXI CCANNNNNNTGG 1 cut(s) 1886
BstYI RGATCY 3 cut(s) 6, 133, 1528
Bsu15I ATCGAT 1 cut(s) 1678
BsuRI GGCC 6 cut(s) 128, 166, 474, 1851, 1877, 1967
BsuTUI ATCGAT 1 cut(s) 1678
BtgZI GCGATG 1 cut(s) 2016
BtsI GCAGTG 4 cut(s) 435, 924, 2218, 2469
BtsIMutI CAGTG 7 cut(s) 11, 42, 435, 924, 2218, 2469, 3048
BveI ACCTGC 2 cut(s) 1171, 1623
Cac8I GCNNGC 5 cut(s) 395, 1764, 1956, 2438, 3023
CaiI CAGNNNCTG 1 cut(s) 2720
CfoI GCGC 4 cut(s) 399, 808, 2208, 3006
ClaI ATCGAT 1 cut(s) 1678
CseI GACGC 2 cut(s) 272, 2407
CsiI ACCWGGT 3 cut(s) 545, 1384, 1885
Csp6I GTAC 6 cut(s) 27, 93, 429, 1506, 1584, 2457
CviQI GTAC 6 cut(s) 27, 93, 429, 1506, 1584, 2457
DdeI CTNAG 9 cut(s) 213, 225, 1069, 1737, 1905, 2141, 2560, 2652, 3051
DriI GACNNNNNGTC 2 cut(s) 532, 1746
EaeI YGGCCR 2 cut(s) 126, 1849
Eam1104I CTCTTC 6 cut(s) 188, 315, 1081, 2385, 2683, 2750
Eam1105I GACNNNNNGTC 2 cut(s) 532, 1746
EarI CTCTTC 6 cut(s) 188, 315, 1081, 2385, 2683, 2750
EciI GGCGGA 1 cut(s) 182
Ecl136II GAGCTC 1 cut(s) 2702
Eco105I TACGTA 1 cut(s) 2080
Eco130I CCWWGG 3 cut(s) 129, 974, 2167
Eco24I GRGCYC 2 cut(s) 476, 2704
Eco31I GGTCTC 2 cut(s) 540, 3050
Eco47I GGWCC 5 cut(s) 100, 1388, 1809, 2505, 2537
Eco53kI GAGCTC 1 cut(s) 2702
Eco57I CTGAAG 2 cut(s) 594, 2742
Eco88I CYCGRG 2 cut(s) 96, 1962
EcoICRI GAGCTC 1 cut(s) 2702
EcoNI CCTNNNNNAGG 1 cut(s) 2514
EcoO109I RGGNCCY 4 cut(s) 100, 472, 2505, 2537
EcoRII CCWGG 4 cut(s) 545, 1384, 1885, 1967
EcoT14I CCWWGG 3 cut(s) 129, 974, 2167
EcoT38I GRGCYC 2 cut(s) 476, 2704
ErhI CCWWGG 3 cut(s) 129, 974, 2167
Esp3I CGTCTC 1 cut(s) 290
FaqI GGGAC 4 cut(s) 1374, 1583, 2518, 2523
FauI CCCGC 1 cut(s) 3018
FauNDI CATATG 3 cut(s) 955, 988, 2442
FbaI TGATCA 3 cut(s) 105, 2050, 2512
FblI GTMKAC 1 cut(s) 2076
Fnu4HI GCNGC 9 cut(s) 818, 993, 2209, 2339, 2629, 2820, 2903, 2906, 2928
FriOI GRGCYC 2 cut(s) 476, 2704
Fsp4HI GCNGC 9 cut(s) 818, 993, 2209, 2339, 2629, 2820, 2903, 2906, 2928
FspAI RTGCGCAY 1 cut(s) 3005
FspBI CTAG 7 cut(s) 354, 672, 1470, 2168, 2607, 2705, 2888
FspI TGCGCA 2 cut(s) 807, 3005
GlaI GCGC 4 cut(s) 398, 807, 2207, 3005
GluI GCNGC 9 cut(s) 818, 993, 2209, 2339, 2629, 2820, 2903, 2906, 2928
GsaI CCCAGC 1 cut(s) 2580
HaeII RGCGCY 1 cut(s) 400
HaeIII GGCC 6 cut(s) 128, 166, 474, 1851, 1877, 1967
HapII CCGG 1 cut(s) 2405
HgaI GACGC 2 cut(s) 272, 2407
HhaI GCGC 4 cut(s) 399, 808, 2208, 3006
Hin6I GCGC 4 cut(s) 397, 806, 2206, 3004
HinP1I GCGC 4 cut(s) 397, 806, 2206, 3004
HincII GTYRAC 2 cut(s) 222, 2147
HindII GTYRAC 2 cut(s) 222, 2147
HindIII AAGCTT 2 cut(s) 1001, 1443
HinfI GANTC 5 cut(s) 16, 1015, 1898, 2216, 2956
HpaII CCGG 1 cut(s) 2405
HphI GGTGA 7 cut(s) 535, 674, 1287, 1474, 1565, 2345, 2903
Hpy166II GTNNAC 6 cut(s) 222, 252, 418, 1467, 2077, 2147
Hpy188I TCNGA 9 cut(s) 63, 379, 463, 574, 1014, 1225, 2347, 2563, 2879
Hpy188III TCNNGA 3 cut(s) 103, 199, 1101
Hpy8I GTNNAC 6 cut(s) 222, 252, 418, 1467, 2077, 2147
Hpy99I CGWCG 3 cut(s) 145, 318, 2598
HpyAV CCTTC 5 cut(s) 888, 1302, 1404, 1500, 2361
HpyCH4III ACNGT 4 cut(s) 37, 648, 2324, 2792
HpyCH4IV ACGT 3 cut(s) 2079, 2149, 2934
HpyF10VI GCNNNNNNNGC 9 cut(s) 814, 1065, 1763, 1964, 2021, 2573, 2819, 2936, 3001
HpyF3I CTNAG 9 cut(s) 213, 225, 1069, 1737, 1905, 2141, 2560, 2652, 3051
HpySE526I ACGT 3 cut(s) 2079, 2149, 2934
HspAI GCGC 4 cut(s) 397, 806, 2206, 3004
KflI GGGWCCC 1 cut(s) 2505
Ksp22I TGATCA 3 cut(s) 105, 2050, 2512
LguI GCTCTTC 3 cut(s) 315, 2385, 2683
LmnI GCTCC 4 cut(s) 404, 1421, 1963, 2171
Lsp1109I GCAGC 8 cut(s) 804, 979, 2220, 2640, 2806, 2889, 2914, 2917
LweI GCATC 7 cut(s) 269, 337, 1354, 1529, 1656, 2554, 3015
MabI ACCWGGT 3 cut(s) 545, 1384, 1885
MaeI CTAG 7 cut(s) 354, 672, 1470, 2168, 2607, 2705, 2888
MaeII ACGT 3 cut(s) 2079, 2149, 2934
MaeIII GTNAC 5 cut(s) 650, 1540, 2213, 2324, 2792
MbiI CCGCTC 2 cut(s) 2341, 2546
MfeI CAATTG 1 cut(s) 1925
MflI RGATCY 3 cut(s) 6, 133, 1528
MhlI GDGCHC 6 cut(s) 476, 2380, 2585, 2704, 3050, 3070
MlsI TGGCCA 2 cut(s) 128, 1851
MluI ACGCGT 1 cut(s) 1836
MluNI TGGCCA 2 cut(s) 128, 1851
MlyI GAGTC 3 cut(s) 1024, 2210, 2965
Mox20I TGGCCA 2 cut(s) 128, 1851
MscI TGGCCA 2 cut(s) 128, 1851
MslI CAYNNNNRTG 4 cut(s) 370, 462, 958, 2331
Msp20I TGGCCA 2 cut(s) 128, 1851
MspA1I CMGCKG 1 cut(s) 2927
MspI CCGG 1 cut(s) 2405
MspR9I CCNGG 4 cut(s) 547, 1386, 1887, 1969
MunI CAATTG 1 cut(s) 1925
MvaI CCWGG 4 cut(s) 547, 1386, 1887, 1969
MvnI CGCG 2 cut(s) 1838, 2401
MwoI GCNNNNNNNGC 9 cut(s) 814, 1065, 1763, 1964, 2021, 2573, 2819, 2936, 3001
NdeI CATATG 3 cut(s) 955, 988, 2442
NmuCI GTSAC 4 cut(s) 650, 2213, 2324, 2792
NsbI TGCGCA 2 cut(s) 807, 3005
NspI RCATGY 4 cut(s) 1109, 1408, 2275, 2855
OliI CACNNNNGTG 2 cut(s) 370, 2331
PaqCI CACCTGC 1 cut(s) 1623
PciI ACATGT 1 cut(s) 1105
PciSI GCTCTTC 3 cut(s) 315, 2385, 2683
PfeI GAWTC 2 cut(s) 16, 1898
PflMI CCANNNNNTGG 2 cut(s) 173, 273
PkrI GCNGC 9 cut(s) 819, 994, 2210, 2340, 2630, 2821, 2904, 2907, 2929
PleI GAGTC 3 cut(s) 1023, 2210, 2964
PpsI GAGTC 3 cut(s) 1023, 2210, 2964
Ppu21I YACGTR 1 cut(s) 2080
PpuMI RGGWCCY 3 cut(s) 100, 2505, 2537
PscI ACATGT 1 cut(s) 1105
Psp124BI GAGCTC 1 cut(s) 2704
Psp1406I AACGTT 2 cut(s) 2149, 2934
Psp5II RGGWCCY 3 cut(s) 100, 2505, 2537
Psp6I CCWGG 4 cut(s) 545, 1384, 1885, 1967
PspFI CCCAGC 1 cut(s) 2576
PspGI CCWGG 4 cut(s) 545, 1384, 1885, 1967
PspOMI GGGCCC 1 cut(s) 472
PspPPI RGGWCCY 3 cut(s) 100, 2505, 2537
PstI CTGCAG 1 cut(s) 2907
PstNI CAGNNNCTG 1 cut(s) 2720
PsuI RGATCY 3 cut(s) 6, 133, 1528
PvuII CAGCTG 1 cut(s) 2927
RsaI GTAC 6 cut(s) 28, 94, 430, 1507, 1585, 2458
RsaNI GTAC 6 cut(s) 27, 93, 429, 1506, 1584, 2457
RseI CAYNNNNRTG 4 cut(s) 370, 462, 958, 2331
SacI GAGCTC 1 cut(s) 2704
SapI GCTCTTC 3 cut(s) 315, 2385, 2683
SatI GCNGC 9 cut(s) 818, 993, 2209, 2339, 2629, 2820, 2903, 2906, 2928
ScaI AGTACT 2 cut(s) 94, 1507
SchI GAGTC 3 cut(s) 1024, 2210, 2965
ScrFI CCNGG 4 cut(s) 547, 1386, 1887, 1969
SduI GDGCHC 6 cut(s) 476, 2380, 2585, 2704, 3050, 3070
SexAI ACCWGGT 3 cut(s) 545, 1384, 1885
SfaNI GCATC 7 cut(s) 269, 337, 1354, 1529, 1656, 2554, 3015
SfcI CTRYAG 2 cut(s) 1060, 2903
SinI GGWCC 5 cut(s) 100, 1388, 1809, 2505, 2537
SmiMI CAYNNNNRTG 4 cut(s) 370, 462, 958, 2331
SmlI CTYRAG 3 cut(s) 197, 303, 2756
SmoI CTYRAG 3 cut(s) 197, 303, 2756
SnaBI TACGTA 1 cut(s) 2080
SpeI ACTAGT 3 cut(s) 671, 1469, 2606
SsiI CCGC 5 cut(s) 193, 1343, 2339, 2544, 3025
SspI AATATT 1 cut(s) 2387
SspMI CTAG 7 cut(s) 354, 672, 1470, 2168, 2607, 2705, 2888
SstI GAGCTC 1 cut(s) 2704
StyD4I CCNGG 4 cut(s) 545, 1384, 1885, 1967
StyI CCWWGG 3 cut(s) 129, 974, 2167
TaaI ACNGT 4 cut(s) 37, 648, 2324, 2792
TaiI ACGT 3 cut(s) 2082, 2152, 2937
TaqI TCGA 5 cut(s) 793, 1102, 1657, 1678, 2698
TaqII GACCGA 2 cut(s) 278, 2352
TatI WGTACW 3 cut(s) 92, 428, 1505
TauI GCSGC 1 cut(s) 2341
TfiI GAWTC 2 cut(s) 16, 1898
TscAI CASTG 7 cut(s) 18, 42, 442, 931, 2218, 2476, 3055
TseFI GTSAC 4 cut(s) 650, 2213, 2324, 2792
TseI GCWGC 8 cut(s) 817, 992, 2208, 2628, 2819, 2902, 2905, 2927
Tsp45I GTSAC 4 cut(s) 650, 2213, 2324, 2792
TspGWI ACGGA 2 cut(s) 129, 2738
TspRI CASTG 7 cut(s) 18, 42, 442, 931, 2218, 2476, 3055
Van91I CCANNNNNTGG 2 cut(s) 173, 273
VpaK11BI GGWCC 5 cut(s) 100, 1388, 1809, 2505, 2537
XagI CCTNNNNNAGG 1 cut(s) 2514
XapI RAATTY 3 cut(s) 596, 1560, 2264
XceI RCATGY 4 cut(s) 1109, 1408, 2275, 2855
XcmI CCANNNNNNNNNTGG 2 cut(s) 828, 1622
XmaJI CCTAGG 1 cut(s) 2167
XmiI GTMKAC 1 cut(s) 2076
XspI CTAG 7 cut(s) 354, 672, 1470, 2168, 2607, 2705, 2888
ZrmI AGTACT 2 cut(s) 94, 1507
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.