MD11G1197500.v1.1

3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000889
Physical Location & Seq
Forward (+)
28335178 .. 28340526
5349 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1197500.v1.1.491

Sequence Viewer

Length: 2907 bp
ATGTTGATAACAATTATTGCCTGGTGTATTTCTCTGCATTTCATCACGGCGTCACCGTCCGATTCGTCTTCTCCCATTGAGTCGGTGCAAGCTCCAAACCCTAATTTCTCCAATTCTGCGATGTCTTCGAATTCGTATGCATCTCTTACAATCCTAAACATCGGCAGTATGGTACCAATCAAACTCAAACGATCAAATTACCTCTCATGGCGTGCTTTATTTGCCCCAATTCTGCGCAAGTATAAGCTTCCTAACATCATTGATGGTACTGAAGTCTATCCATCGCCTTTTCTTCCTGATCGCTCTCTCAATCCTACTTTTGAGATTTGGTATGAGAAAGATCAAAATCTTCTCATTTGGTTGAATTCTACTCTGTCTGAAGAAGTGATTCCTTTCACAGTCGATGTCTCATTGTCTCGAGACTTATGGCTTAAACTTGAGCAGCGCTTTGGAGGAGTCTCTGATGCTCACATTCATCAGTTACGCTCTCGTCTCCAATCAATTCAGAAAGGTTCACAGTCAATTTCTAATTATCTTCAACAAATCAAGGAAATTTTTGACGCTTTAATGGCGGCTGGTGCTCCTGTCACTGACCGTGACCTAATTCCTTCTCGTGGACATTACCGCAGCAATCATCGTGGAAACTATAGAGGCATTGCTCGTGGTCATCGTGGTAATTACAAAGGCAATAATTTTCGTGGCAATTCTCAAGGTTTTTGTAGCAACTCTCAAGGCTCTCATGGTCTTAATTGTCAAATCTGTGGATCAACCAGTTATGAGGCTATTGACTGTTTTGATCTAATGAATCTGGATATTTTTGGCAAAGTCCCTCATGCCAAACCTGCTGCTATGTGTGCACATTTTTCATCCAAGCCCTCTCCTTCTTGGCTCATTGATTCGGGTGCTACTTCACATATTACAAATGACATTTCTAACATTTCATCTCCTACTCCTTATCGCAATGAAGACAAGGTCTACATTGGTAATGGTAAAGGTTTGACAATTAACAACATTGGTTCTTCCTTTTTACATACTCCCTCTGCTACTTTTAAACTGCAAAATGTTCTTCATGTTTCCCAAATGAAGCACAATTTACTCTCTGCATATCAATTTCTCAAGGATAATTACTGTTCTTTGACATTTAATTTTGATGGATCCTTTGTAAATGATCGTTTTACGGGGAAGACGCTTTTGCGGGGACCGGTTAATGATGGTTTTTATCCCTTGCAATGTTCATCTCTGTCACCTACAAGCTCTGCTACTTCAACCACTGCCTTAATAAGTGTCATAGCACCTGTTCCAATTTGGCACAATCGACTTGGCCATCCCTCTTCTTCAATTTTCAAGCGTGTTCTTTCCCAGAATAAGCTTGCTCTTCAAGGCAGAACTTCAATGGATTTCTTTTGTTCCAACTGTGCTCTTGCCAAAAGTCACAAGCAATCTTTTAGTCCTATTAGGTTCATTATGTCTGTGAGTGGTTATAGATACTATATGTTGCTTGTGGATGACTATAGTAAATACAGTTGGTTTTTTCCTTTACAGACAAAATCTGAAGTGTATTCTATATTTGTTGAGTTCAAGAGTTATGTAGAAAATCTTCTTGGCAATAAAATAAAGGTACTTCGTTCTGATTCAAGGGGTGAATTTACTAGCTCTGCGCTCCAGCATTTTCTCAAAACTTATGGTATTATACACCAATTTAGTTGTCCATACACACCTGAACAGAATGGTTATGCAGAAAGGAAACATCGCCATCTTGTTGACATTGTTCGAACCTTCTTGGTTGCTTCTAATGTGCCTCATGTTTTCTGGGTAGAGGCTTTTTCCACTGATATATACTTGATTAATCGCCTTCTAATCTCTGGTTTAATGCAATCACCCTGGGAATTATTGTTTCATACTCAACCTGATTACAGTCGACTGAAAGTATTTGGTTGCAGTTGTTTTCCATGGCTTAAGCCTTATACAACTTCCAAACTGGATAGCAAAAGTAAGTACTGTGTATTCTTGGGTTACAGTCTTCAACATAAGGGATATAGGTGCTTAGATCCAATGACACAGAGGGTATATATATCTCGTCATGTTGTTTTTGATGAATTTACCTTTCCATTTCATCACTCTCAACCACTGTCCTCCATTGATTCTTGGTCTACTGTAGTATCTTCATTCGATTTGCAGTTTACTGTTCCCTATTCTTCCAGGTCTTCTCTTACTGCTGCACCTGTCCCATATACTGATATCAATGTTGACTTGTCTTCACTGTCTCCCATCCAAAGTATTATCGATACTTCTTCACATGCTGAGACTGTTGATACCCATGCTGCCACTATTACTCCACATGCTACTTCTATTGATCCTCCTGGGTTTAGTGATTCCTCTTTTCCTAATCATGTGTGCAAGTTTAAAAAGTTTCTCTATGGCCTTAAACAGGCTCCAAGGGCTTGGTTTGACAAATTATTTCAAGTGTTGCGATCCTTTGGCTTTCAGCAATCATCTTCAGATGCCTCTCTCTTTGTCTTACACACTCCAACCATGGTTATCATCCTTGTATATGTTGATGGTATTCTAGTTACAAGACTTAATGCTACTCTCTGTCAACATTTCATCAATAAACTGAGCAATGTATTTCCAGTCAAAGATTTAGGTTCTTTGCACTATTTTTTGGGCCTTGAGGTGCACAGGTCGTCTGAAGGTATCTTTTTACATCAAGGCAAATATTTACTTGATCTTCTTCAGAAAACTAAGATGGATGGAGCCAAACCATGTTCCACTCCTTTAGGCACGTCAAAGCTTGATCATACAGGGTGTACCTTTGACAGAAGGTCCACCAGTGGCTATTGTGATCCTCTTCGGAGTCTCTGCCATGGCTGCTCCGACTCCGAGCGTGCAGAAACGATGGCAATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000137 GO:0000139 GO:0000295 GO:0003674 GO:0005215 GO:0005346 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005794 GO:0005795 GO:0006029 GO:0006082 GO:0006139 GO:0006163 GO:0006164 GO:0006725 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006820 GO:0006862 GO:0008150 GO:0008152 GO:0008509 GO:0008514 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009259 GO:0009260 GO:0009987 GO:0012505 GO:0015012 GO:0015075 GO:0015215 GO:0015216 GO:0015605 GO:0015711 GO:0015748 GO:0015865 GO:0015868 GO:0015931 GO:0015932 GO:0016020 GO:0016021 GO:0018130 GO:0019438 GO:0019538 GO:0019637 GO:0019693 GO:0022857 GO:0030166 GO:0030173 GO:0030176 GO:0030201 GO:0031090 GO:0031224 GO:0031227 GO:0031228 GO:0031300 GO:0031301 GO:0031984 GO:0031985 GO:0033865 GO:0033866 GO:0033875 GO:0034030 GO:0034032 GO:0034033 GO:0034035 GO:0034036 GO:0034220 GO:0034641 GO:0034645 GO:0034654 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044272 GO:0044281 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046390 GO:0046483 GO:0046963 GO:0046964 GO:0050427 GO:0050428 GO:0051179 GO:0051234 GO:0051503 GO:0055085 GO:0055086 GO:0071702 GO:0071704 GO:0071705 GO:0072348 GO:0072521 GO:0072522 GO:0072530 GO:0090407 GO:0098588 GO:0098656 GO:0098791 GO:0098827 GO:1901135 GO:1901137 GO:1901264 GO:1901293 GO:1901360 GO:1901362 GO:1901505 GO:1901564 GO:1901566 GO:1901576 GO:1901679 GO:1901682 GO:1902559
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UAA

Protein Analysis

969

Amino Acids

108.81

Weight (kDa)

8.94

Isoelectric Point (pI)

47.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pol_BBD PF22936 296 - 376 9.8e-15 Pol polyprotein, beta-barrel domain
gag_pre-integrs PF13976 406 - 477 3.7e-10 GAG-pre-integrase domain
rve PF00665 488 - 573 1.5e-08 Integrase core domain
SH3_retrovirus PF25597 646 - 707 3.2e-23 Retroviral polymerase SH3-like domain
RVT_2 PF07727 784 - 926 5.9e-29 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 236
Acc36I ACCTGC 1 cut(s) 850
Acc65I GGTACC 1 cut(s) 172
AccB1I GGYRCC 1 cut(s) 172
AccI GTMKAC 3 cut(s) 975, 1918, 2150
AciI CCGC 3 cut(s) 572, 625, 1195
AclWI GGATC 7 cut(s) 772, 1149, 1162, 2042, 2348, 2466, 2837
AcoI YGGCCR 1 cut(s) 1321
AcsI RAATTY 5 cut(s) 130, 364, 552, 1643, 2096
AcuI CTGAAG 6 cut(s) 291, 399, 1572, 2481, 2709, 2717
AcyI GRCGYC 1 cut(s) 50
AfaI GTAC 5 cut(s) 174, 268, 1620, 1997, 2809
AfeI AGCGCT 1 cut(s) 446
AfiI CCNNNNNNNGG 2 cut(s) 614, 2428
AflII CTTAAG 1 cut(s) 1955
AgeI ACCGGT 1 cut(s) 1201
AhdI GACNNNNNGTC 1 cut(s) 2821
AjiI CACGTC 1 cut(s) 2784
AjnI CCWGG 4 cut(s) 20, 1880, 2198, 2359
AjuI GAANNNNNNNTTGG 2 cut(s) 1584, 1616
AluBI AGCT 6 cut(s) 92, 247, 1254, 1369, 1653, 2791
AluI AGCT 6 cut(s) 92, 247, 1254, 1369, 1653, 2791
Alw21I GWGCWC 4 cut(s) 583, 859, 1420, 2679
Alw26I GTCTC 8 cut(s) 412, 414, 420, 463, 497, 2268, 2297, 2861
Alw44I GTGCAC 2 cut(s) 855, 2675
AlwI GGATC 7 cut(s) 772, 1149, 1162, 2042, 2348, 2466, 2837
Ama87I CYCGRG 1 cut(s) 417
Aor51HI AGCGCT 1 cut(s) 446
AoxI GGCC 3 cut(s) 1321, 2419, 2665
ApaLI GTGCAC 2 cut(s) 855, 2675
ApeKI GCWGC 6 cut(s) 442, 627, 845, 2216, 2321, 2868
ApoI RAATTY 5 cut(s) 130, 364, 552, 1643, 2096
AseI ATTAAT 1 cut(s) 1845
AsiGI ACCGGT 1 cut(s) 1201
Asp700I GAANNNNTTC 2 cut(s) 387, 1596
Asp718I GGTACC 1 cut(s) 172
AspLEI GCGC 3 cut(s) 237, 447, 1660
AspS9I GGNCC 3 cut(s) 1199, 2665, 2823
AsuHPI GGTGA 4 cut(s) 45, 1236, 1652, 1869
AsuII TTCGAA 2 cut(s) 128, 1771
AvaI CYCGRG 1 cut(s) 417
AvaII GGWCC 2 cut(s) 1199, 2823
BaeGI GKGCMC 2 cut(s) 859, 2679
BaeI ACNNNNGTAYC 4 cut(s) 258, 291, 2142, 2175
BalI TGGCCA 1 cut(s) 1323
BamHI GGATCC 1 cut(s) 1154
BanI GGYRCC 1 cut(s) 172
BarI GAAGNNNNNNTAC 2 cut(s) 1581, 1613
BauI CACGAG 2 cut(s) 612, 660
BbsI GAAGAC 7 cut(s) 60, 117, 972, 1190, 2012, 2196, 2247
Bbv12I GWGCWC 4 cut(s) 583, 859, 1420, 2679
BbvI GCAGC 6 cut(s) 454, 639, 832, 2203, 2308, 2855
BceAI ACGGC 1 cut(s) 63
BciT130I CCWGG 4 cut(s) 22, 1882, 2200, 2361
BclI TGATCA 1 cut(s) 2794
BcoDI GTCTC 8 cut(s) 412, 414, 420, 463, 497, 2268, 2297, 2861
BfaI CTAG 2 cut(s) 1650, 2567
BfmI CTRYAG 3 cut(s) 646, 1510, 2154
BfoI RGCGCY 1 cut(s) 448
BfrI CTTAAG 1 cut(s) 1955
BfuAI ACCTGC 1 cut(s) 850
BisI GCNGC 7 cut(s) 443, 573, 628, 846, 2217, 2322, 2869
BlsI GCNGC 7 cut(s) 444, 574, 629, 847, 2218, 2323, 2870
BmcAI AGTACT 1 cut(s) 1997
Bme1390I CCNGG 4 cut(s) 22, 1882, 2200, 2361
Bme18I GGWCC 2 cut(s) 1199, 2823
BmeRI GACNNNNNGTC 1 cut(s) 2821
BmeT110I CYCGRG 1 cut(s) 417
BmgBI CACGTC 1 cut(s) 2784
BmgT120I GGNCC 3 cut(s) 1199, 2665, 2823
BmiI GGNNCC 5 cut(s) 174, 1156, 1200, 2433, 2755
BmrFI CCNGG 4 cut(s) 22, 1882, 2200, 2361
BmsI GCATC 3 cut(s) 149, 454, 2491
BpiI GAAGAC 7 cut(s) 60, 117, 972, 1190, 2012, 2196, 2247
BpmI CTGGAG 1 cut(s) 1646
Bpu14I TTCGAA 2 cut(s) 128, 1771
BpuEI CTTGAG 5 cut(s) 458, 693, 714, 1100, 2690
Bsa29I ATCGAT 1 cut(s) 2283
BsaBI GATNNNNATC 1 cut(s) 345
BsaHI GRCGYC 1 cut(s) 50
BsaJI CCNNGG 7 cut(s) 1880, 1881, 1949, 2360, 2435, 2532, 2863
BsaWI WCCGGW 1 cut(s) 1201
BsaXI ACNNNNNCTCC 2 cut(s) 2317, 2347
Bsc4I CCNNNNNNNGG 2 cut(s) 614, 2428
Bse118I RCCGGY 1 cut(s) 1201
Bse1I ACTGG 4 cut(s) 771, 1983, 2630, 2829
Bse3DI GCAATG 5 cut(s) 654, 967, 1235, 2626, 2907
Bse8I GATNNNNATC 1 cut(s) 345
BseBI CCWGG 4 cut(s) 22, 1882, 2200, 2361
BseCI ATCGAT 1 cut(s) 2283
BseDI CCNNGG 7 cut(s) 1880, 1881, 1949, 2360, 2435, 2532, 2863
BseGI GGATG 6 cut(s) 866, 1324, 1510, 2268, 2541, 2755
BseJI GATNNNNATC 1 cut(s) 345
BseLI CCNNNNNNNGG 2 cut(s) 614, 2428
BseMI GCAATG 5 cut(s) 654, 967, 1235, 2626, 2907
BseMII CTCAG 2 cut(s) 2292, 2606
BseNI ACTGG 4 cut(s) 771, 1983, 2630, 2829
BseRI GAGGAG 1 cut(s) 468
BseSI GKGCMC 2 cut(s) 859, 2679
BseXI GCAGC 6 cut(s) 454, 639, 832, 2203, 2308, 2855
BsgI GTGCAG 2 cut(s) 2202, 2907
BshFI GGCC 3 cut(s) 1323, 2421, 2667
BshNI GGYRCC 1 cut(s) 172
BshTI ACCGGT 1 cut(s) 1201
BshVI ATCGAT 1 cut(s) 2283
BsiHKAI GWGCWC 4 cut(s) 583, 859, 1420, 2679
BsiHKCI CYCGRG 1 cut(s) 417
BsiSI CCGG 1 cut(s) 1202
BslFI GGGAC 3 cut(s) 812, 1212, 2210
BslI CCNNNNNNNGG 2 cut(s) 614, 2428
BsmAI GTCTC 8 cut(s) 412, 414, 420, 463, 497, 2268, 2297, 2861
BsmBI CGTCTC 1 cut(s) 497
BsmFI GGGAC 3 cut(s) 812, 1212, 2210
BsnI GGCC 3 cut(s) 1323, 2421, 2667
BsoBI CYCGRG 1 cut(s) 417
Bsp119I TTCGAA 2 cut(s) 128, 1771
Bsp1286I GDGCHC 4 cut(s) 583, 859, 1420, 2679
Bsp19I CCATGG 3 cut(s) 1949, 2532, 2863
BspACI CCGC 3 cut(s) 572, 625, 1195
BspANI GGCC 3 cut(s) 1323, 2421, 2667
BspCNI CTCAG 2 cut(s) 2293, 2607
BspDI ATCGAT 1 cut(s) 2283
BspLI GGNNCC 5 cut(s) 174, 1156, 1200, 2433, 2755
BspMI ACCTGC 1 cut(s) 850
BspPI GGATC 7 cut(s) 772, 1149, 1162, 2042, 2348, 2466, 2837
BspQI GCTCTTC 1 cut(s) 1380
BspT104I TTCGAA 2 cut(s) 128, 1771
BspT107I GGYRCC 1 cut(s) 172
BspTI CTTAAG 1 cut(s) 1955
BsrDI GCAATG 5 cut(s) 654, 967, 1235, 2626, 2907
BsrFI RCCGGY 1 cut(s) 1201
BsrI ACTGG 4 cut(s) 771, 1983, 2630, 2829
BssAI RCCGGY 1 cut(s) 1201
BssECI CCNNGG 7 cut(s) 1880, 1881, 1949, 2360, 2435, 2532, 2863
BssNI GRCGYC 1 cut(s) 50
BssSI CACGAG 2 cut(s) 612, 660
BssT1I CCWWGG 4 cut(s) 1949, 2435, 2532, 2863
Bst2BI CACGAG 2 cut(s) 612, 660
Bst2UI CCWGG 4 cut(s) 22, 1882, 2200, 2361
Bst6I CTCTTC 3 cut(s) 1336, 1380, 2853
BstACI GRCGYC 1 cut(s) 50
BstAFI CTTAAG 1 cut(s) 1955
BstBI TTCGAA 2 cut(s) 128, 1771
BstC8I GCNNGC 4 cut(s) 90, 213, 1371, 2886
BstDEI CTNAG 4 cut(s) 2044, 2301, 2615, 2742
BstDSI CCRYGG 3 cut(s) 1949, 2532, 2863
BstENI CCTNNNNNAGG 1 cut(s) 2426
BstF5I GGATG 6 cut(s) 866, 1324, 1510, 2268, 2541, 2755
BstH2I RGCGCY 1 cut(s) 448
BstHHI GCGC 3 cut(s) 237, 447, 1660
BstMAI GTCTC 8 cut(s) 412, 414, 420, 463, 497, 2268, 2297, 2861
BstMWI GCNNNNNNNGC 7 cut(s) 221, 569, 578, 842, 854, 2438, 2868
BstNI CCWGG 4 cut(s) 22, 1882, 2200, 2361
BstNSI RCATGY 2 cut(s) 2300, 2342
BstSCI CCNGG 4 cut(s) 20, 1880, 2198, 2359
BstSFI CTRYAG 3 cut(s) 646, 1510, 2154
BstSLI GKGCMC 2 cut(s) 859, 2679
BstV1I GCAGC 6 cut(s) 454, 639, 832, 2203, 2308, 2855
BstV2I GAAGAC 7 cut(s) 60, 117, 972, 1190, 2012, 2196, 2247
BstX2I RGATCY 2 cut(s) 1154, 2047
BstXI CCANNNNNNTGG 1 cut(s) 2442
BstYI RGATCY 2 cut(s) 1154, 2047
Bsu15I ATCGAT 1 cut(s) 2283
BsuRI GGCC 3 cut(s) 1323, 2421, 2667
BsuTUI ATCGAT 1 cut(s) 2283
BtgI CCRYGG 3 cut(s) 1949, 2532, 2863
BtgZI GCGATG 3 cut(s) 134, 267, 1733
BtrI CACGTC 1 cut(s) 2784
BtsCI GGATG 6 cut(s) 866, 1324, 1510, 2268, 2541, 2755
BtsI GCAGTG 1 cut(s) 1269
BtsIMutI CAGTG 6 cut(s) 588, 1269, 1827, 2126, 2258, 2836
BveI ACCTGC 1 cut(s) 850
Cac8I GCNNGC 4 cut(s) 90, 213, 1371, 2886
CfoI GCGC 3 cut(s) 237, 447, 1660
Cfr10I RCCGGY 1 cut(s) 1201
Cfr13I GGNCC 3 cut(s) 1199, 2665, 2823
ClaI ATCGAT 1 cut(s) 2283
CseI GACGC 3 cut(s) 39, 569, 1195
Csp6I GTAC 5 cut(s) 173, 267, 1619, 1996, 2808
CspAI ACCGGT 1 cut(s) 1201
CspCI CAANNNNNGTGG 2 cut(s) 619, 654
CviQI GTAC 5 cut(s) 173, 267, 1619, 1996, 2808
DdeI CTNAG 4 cut(s) 2044, 2301, 2615, 2742
DraI TTTAAA 2 cut(s) 1051, 2404
DriI GACNNNNNGTC 1 cut(s) 2821
EaeI YGGCCR 1 cut(s) 1321
Eam1104I CTCTTC 3 cut(s) 1336, 1380, 2853
Eam1105I GACNNNNNGTC 1 cut(s) 2821
EarI CTCTTC 3 cut(s) 1336, 1380, 2853
Eco130I CCWWGG 4 cut(s) 1949, 2435, 2532, 2863
Eco32I GATATC 1 cut(s) 2239
Eco47I GGWCC 2 cut(s) 1199, 2823
Eco47III AGCGCT 1 cut(s) 446
Eco57I CTGAAG 6 cut(s) 291, 399, 1572, 2481, 2709, 2717
Eco88I CYCGRG 1 cut(s) 417
EcoNI CCTNNNNNAGG 1 cut(s) 2426
EcoRI GAATTC 2 cut(s) 130, 364
EcoRII CCWGG 4 cut(s) 20, 1880, 2198, 2359
EcoRV GATATC 1 cut(s) 2239
EcoT14I CCWWGG 4 cut(s) 1949, 2435, 2532, 2863
EcoT22I ATGCAT 1 cut(s) 142
ErhI CCWWGG 4 cut(s) 1949, 2435, 2532, 2863
Esp3I CGTCTC 1 cut(s) 497
FaqI GGGAC 3 cut(s) 812, 1212, 2210
FauI CCCGC 1 cut(s) 1188
FbaI TGATCA 1 cut(s) 2794
FblI GTMKAC 3 cut(s) 975, 1918, 2150
Fnu4HI GCNGC 7 cut(s) 443, 573, 628, 846, 2217, 2322, 2869
FokI GGATG 6 cut(s) 853, 1311, 1517, 2255, 2528, 2762
Fsp4HI GCNGC 7 cut(s) 443, 573, 628, 846, 2217, 2322, 2869
FspBI CTAG 2 cut(s) 1650, 2567
FspI TGCGCA 1 cut(s) 236
GlaI GCGC 3 cut(s) 236, 446, 1659
GluI GCNGC 7 cut(s) 443, 573, 628, 846, 2217, 2322, 2869
GsuI CTGGAG 1 cut(s) 1646
HaeII RGCGCY 1 cut(s) 448
HaeIII GGCC 3 cut(s) 1323, 2421, 2667
HapII CCGG 1 cut(s) 1202
HgaI GACGC 3 cut(s) 39, 569, 1195
HhaI GCGC 3 cut(s) 237, 447, 1660
Hin1I GRCGYC 1 cut(s) 50
Hin6I GCGC 3 cut(s) 235, 445, 1658
HinP1I GCGC 3 cut(s) 235, 445, 1658
HincII GTYRAC 4 cut(s) 1762, 1919, 2248, 2597
HindII GTYRAC 4 cut(s) 1762, 1919, 2248, 2597
HindIII AAGCTT 3 cut(s) 245, 1367, 2789
HpaII CCGG 1 cut(s) 1202
HphI GGTGA 4 cut(s) 45, 1236, 1652, 1869
Hpy188III TCNNGA 5 cut(s) 296, 417, 419, 809, 1579
HpyAV CCTTC 6 cut(s) 618, 891, 1786, 1862, 2684, 2814
HpyCH4IV ACGT 1 cut(s) 2783
HpyF10VI GCNNNNNNNGC 7 cut(s) 221, 569, 578, 842, 854, 2438, 2868
HpyF3I CTNAG 4 cut(s) 2044, 2301, 2615, 2742
HpySE526I ACGT 1 cut(s) 2783
Hsp92I GRCGYC 1 cut(s) 50
HspAI GCGC 3 cut(s) 235, 445, 1658
KpnI GGTACC 1 cut(s) 176
Ksp22I TGATCA 1 cut(s) 2794
LguI GCTCTTC 1 cut(s) 1380
LmnI GCTCC 6 cut(s) 97, 586, 1665, 2437, 2753, 2876
Lsp1109I GCAGC 6 cut(s) 454, 639, 832, 2203, 2308, 2855
LweI GCATC 3 cut(s) 149, 454, 2491
MaeI CTAG 2 cut(s) 1650, 2567
MaeII ACGT 1 cut(s) 2783
MaeIII GTNAC 8 cut(s) 51, 480, 586, 596, 1242, 1430, 2012, 2569
MflI RGATCY 2 cut(s) 1154, 2047
MhlI GDGCHC 4 cut(s) 583, 859, 1420, 2679
MlsI TGGCCA 1 cut(s) 1323
MluNI TGGCCA 1 cut(s) 1323
MlyI GAGTC 4 cut(s) 89, 465, 2863, 2870
MmeI TCCRAC 3 cut(s) 1434, 2552, 2898
Mox20I TGGCCA 1 cut(s) 1323
Mph1103I ATGCAT 1 cut(s) 142
MroXI GAANNNNTTC 2 cut(s) 387, 1596
MscI TGGCCA 1 cut(s) 1323
Msp20I TGGCCA 1 cut(s) 1323
MspCI CTTAAG 1 cut(s) 1955
MspI CCGG 1 cut(s) 1202
MspR9I CCNGG 4 cut(s) 22, 1882, 2200, 2361
MvaI CCWGG 4 cut(s) 22, 1882, 2200, 2361
MwoI GCNNNNNNNGC 7 cut(s) 221, 569, 578, 842, 854, 2438, 2868
NcoI CCATGG 3 cut(s) 1949, 2532, 2863
NlaIV GGNNCC 5 cut(s) 174, 1156, 1200, 2433, 2755
NmuCI GTSAC 5 cut(s) 51, 586, 596, 1242, 1430
NsbI TGCGCA 1 cut(s) 236
NsiI ATGCAT 1 cut(s) 142
NspI RCATGY 2 cut(s) 2300, 2342
NspV TTCGAA 2 cut(s) 128, 1771
PaeR7I CTCGAG 1 cut(s) 417
PasI CCCWGGG 1 cut(s) 1881
PciSI GCTCTTC 1 cut(s) 1380
PcsI WCGNNNNNNNCGW 2 cut(s) 53, 667
PdmI GAANNNNTTC 2 cut(s) 387, 1596
PfeI GAWTC 7 cut(s) 62, 388, 805, 896, 1631, 2141, 2372
PflFI GACNNNGTC 1 cut(s) 971
PinAI ACCGGT 1 cut(s) 1201
PkrI GCNGC 7 cut(s) 444, 574, 629, 847, 2218, 2323, 2870
PleI GAGTC 4 cut(s) 88, 464, 2862, 2870
PpsI GAGTC 4 cut(s) 88, 464, 2862, 2870
PshBI ATTAAT 1 cut(s) 1845
Psp6I CCWGG 4 cut(s) 20, 1880, 2198, 2359
PspGI CCWGG 4 cut(s) 20, 1880, 2198, 2359
PspN4I GGNNCC 5 cut(s) 174, 1156, 1200, 2433, 2755
PspPI GGNCC 3 cut(s) 1199, 2665, 2823
PsuI RGATCY 2 cut(s) 1154, 2047
PsyI GACNNNGTC 1 cut(s) 971
RsaI GTAC 5 cut(s) 174, 268, 1620, 1997, 2809
RsaNI GTAC 5 cut(s) 173, 267, 1619, 1996, 2808
SalI GTCGAC 1 cut(s) 1917
SapI GCTCTTC 1 cut(s) 1380
SatI GCNGC 7 cut(s) 443, 573, 628, 846, 2217, 2322, 2869
Sau96I GGNCC 3 cut(s) 1199, 2665, 2823
ScaI AGTACT 1 cut(s) 1997
SchI GAGTC 4 cut(s) 89, 465, 2863, 2870
ScrFI CCNGG 4 cut(s) 22, 1882, 2200, 2361
SduI GDGCHC 4 cut(s) 583, 859, 1420, 2679
SfaNI GCATC 3 cut(s) 149, 454, 2491
SfcI CTRYAG 3 cut(s) 646, 1510, 2154
Sfr274I CTCGAG 1 cut(s) 417
SfuI TTCGAA 2 cut(s) 128, 1771
SinI GGWCC 2 cut(s) 1199, 2823
SlaI CTCGAG 1 cut(s) 417
SmlI CTYRAG 7 cut(s) 417, 437, 708, 729, 1115, 1955, 2669
SmoI CTYRAG 7 cut(s) 417, 437, 708, 729, 1115, 1955, 2669
SsiI CCGC 3 cut(s) 572, 625, 1195
SspI AATATT 1 cut(s) 2717
SspMI CTAG 2 cut(s) 1650, 2567
StyD4I CCNGG 4 cut(s) 20, 1880, 2198, 2359
StyI CCWWGG 4 cut(s) 1949, 2435, 2532, 2863
TaiI ACGT 1 cut(s) 2786
TaqI TCGA 8 cut(s) 128, 402, 418, 1315, 1771, 1918, 2169, 2283
TatI WGTACW 1 cut(s) 1995
TauI GCSGC 1 cut(s) 575
TfiI GAWTC 7 cut(s) 62, 388, 805, 896, 1631, 2141, 2372
TscAI CASTG 6 cut(s) 595, 1276, 1834, 2133, 2265, 2836
TseFI GTSAC 5 cut(s) 51, 586, 596, 1242, 1430
TseI GCWGC 6 cut(s) 442, 627, 845, 2216, 2321, 2868
Tsp45I GTSAC 5 cut(s) 51, 586, 596, 1242, 1430
TspRI CASTG 6 cut(s) 595, 1276, 1834, 2133, 2265, 2836
Tth111I GACNNNGTC 1 cut(s) 971
Vha464I CTTAAG 1 cut(s) 1955
VneI GTGCAC 2 cut(s) 855, 2675
VpaK11BI GGWCC 2 cut(s) 1199, 2823
VspI ATTAAT 1 cut(s) 1845
XagI CCTNNNNNAGG 1 cut(s) 2426
XapI RAATTY 5 cut(s) 130, 364, 552, 1643, 2096
XceI RCATGY 2 cut(s) 2300, 2342
XhoI CTCGAG 1 cut(s) 417
XmiI GTMKAC 3 cut(s) 975, 1918, 2150
XmnI GAANNNNTTC 2 cut(s) 387, 1596
XspI CTAG 2 cut(s) 1650, 2567
ZrmI AGTACT 1 cut(s) 1997
Zsp2I ATGCAT 1 cut(s) 142
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.