Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000889

Physical Location & Seq

Genomic Coordinates Reverse (-)

3933744 .. 3935989

Gene Structure 2246 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ16309

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1386 bp

ATGAAGATCCCACTGAATCCCTCTGGTACATTGACAGTGGTGCTACAAACCACATTACCTCTGATCTCGCCAACCTCAACATTCACAATGAGTACTCGGGTCCTGATCAAGTTTCTGTTGCTAATGGCCAAGGATCTTCCGTCGGGGAAAGTTCTTTTTCACGGGCCATGTAATGGTAGTCTCTTCCCCATCCGCCTCAAGAAGTCTTTACCTCAGTCGTCAACACAGCCATCCACTCCATCAGTTTTGTTCACATCTGCATCCTCCACCACTTGGCACAAGCGTCTCGGTCATCCCTCCCCTCAAGCTCTTCGTCGTCTTGTCTCGCATCATCAGTTAAATGTTTTATGTTCTAGTAGTCCTCCACCTTTGTGTTCAGATTGTCAATTAGGCAGGCGCTCCAAACTTCCTTTTGTAAACTCATCTTGTACTACCACTGCACCTTTGCAGATCATCCATTCTGATGTTTGGGGCCCGACCTCCATTTTATCTGTTAGTGGATTTAAGTATTATGTTCTCTTTATTGACGACTGGTCTCGCTTCACCTGGTTGTTTCCTTTGCATTGCAAATCTGAAGTTTTCCACTCTTTTCAAAAATTCAAACTGCTTGTTGAAAATCAATTTGATACAAAAATCAAATCTTTACGGTGTGACAATGGTGGTGAATACACTAGTGCTGTTTTTCAATCTTTTTTGTCTAACAATGGCATTGCTCAACAATTCTCATGCCCACACACACCAGAACAAAATGGAATGGCAGAGAGAAAACACCGACATTTAATTGAACTAACTCGAACTCTATTTGCGCAGTCTTCGCTGCCATTCAAATACTGGGTTGAGATTGTTCAAACATCAGTTTATTTAATCAATAGGTTGCCTTCCTCCTCCCTGCATTTCATCTCTCCTTTTGAACAATTATTCAACACTGCACCAGACTACAATTTTTTACGAGCATATGGGTGTTTGTGTTTTCCTTGGTTAAAACCATATGCTGCTCATAAGCTTGATTTTCGGAGTCGCAAGTGTGTTTTTCTTGGTTATAGTCTTTATCAAAAAGGCTATAGGTGCTTAGACCCCACAAATGGAAGAGTTTATGTGTCTCGACATGTCATATTTGATGAAAACACTTTTCCATTCAAAGAGAAACTCTCTGCCCCACAACCTGCCAACCCACCTCCAATCCCATCCTATCCTATCCTATTACCTTTGCCTCCCTTTTTATCGGAACCCACACCTAATATAATTCAGCCGACCACTCCCACCAATCCTACTTTATCCCTATCTCCACCACCTTCACCCTCCCCCATACAAACCCCTCCCACTACACAACTCACTCCCCCTCCGCATCCTCCTCCTCCCACGAGATCAAGGCACCTTTGTACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

461

Amino Acids

51.83

Weight (kDa)

9.58

Isoelectric Point (pI)

58.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
gag_pre-integrs	PF13976	72 - 131	1e-10	GAG-pre-integrase domain
rve	PF00665	146 - 247	4.2e-12	Integrase core domain
SH3_retrovirus	PF25597	321 - 382	1.3e-25	Retroviral polymerase SH3-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000889)

Species	Orthologous Gene IDs
arabidopsis_thaliana	ATMG00820
fragaria_vesca	FvH4_2g11011 FvH4_2g23061 FvH4_3g33302 FvH4_4g01631 FvH4_5g39270 FvH4_6g33903
malus_domestica	MD00G1024600.v1.1 MD00G1084700.v1.1 MD02G1303700.v1.1 MD03G1056000.v1.1 MD04G1231400.v1.1 MD05G1050400.v1.1 MD09G1100700.v1.1 MD09G1214100.v1.1 MD11G1146000.v1.1 MD11G1197500.v1.1 MD12G1020900.v1.1 MD12G1052500.v1.1 MD12G1175300.v1.1 MD12G1185900.v1.1 MD13G1050200.v1.1 MD13G1157100.v1.1 MD14G1109000.v1.1 MD14G1189500.v1.1 MD14G1225200.v1.1 MD16G1247000.v1.1 MD16G1278000.v1.1 MD17G1115400.v1.1 MD17G1248200.v1.1
pyrus_communis	pycom02g18580 pycom03g02970 pycom03g07840 pycom05g12390 pycom05g14310 pycom07g14010 pycom07g17390 pycom08g03700 pycom08g03730 pycom12g14660 pycom14g19040 pycom15g04630 pycom15g35310 pycom17g24840 pycom520g01050
rosa_chinensis	RchiOBHm_Chr2g0093581 RchiOBHm_Chr2g0139021 RchiOBHm_Chr2g0153961 RchiOBHm_Chr3g0454851 RchiOBHm_Chr3g0479941 RchiOBHm_Chr5g0074721 RchiOBHm_Chr7g0182831 RchiOBHm_Chr7g0210861 RchiOBHm_Chr7g0238261
rosa_roxburghii	Rroxscaffold_1G00010990 Rroxscaffold_1G00042070 Rroxscaffold_2G00082160 Rroxscaffold_3G00266700
rosa_wichuraiana	Rw1G002370 Rw2G026000 Rw3G024450 Rw4G009390 Rw5G000900 Rw5G015970 Rw6G031570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	807
Acc36I	ACCTGC	1 cut(s)	1171
AccB1I	GGYRCC	1 cut(s)	1371
AccB7I	CCANNNNNTGG	2 cut(s)	173, 273
AciI	CCGC	2 cut(s)	193, 1343
AclWI	GGATC	1 cut(s)	141
AcoI	YGGCCR	1 cut(s)	126
AcsI	RAATTY	1 cut(s)	596
AcuI	CTGAAG	1 cut(s)	594
AfaI	GTAC	4 cut(s)	28, 94, 430, 1381
AfiI	CCNNNNNNNGG	3 cut(s)	173, 273, 1082
AflIII	ACRYGT	1 cut(s)	1105
AhdI	GACNNNNNGTC	1 cut(s)	532
AhlI	ACTAGT	1 cut(s)	671
AjnI	CCWGG	1 cut(s)	545
AleI	CACNNNNGTG	1 cut(s)	370
AluBI	AGCT	2 cut(s)	308, 1003
AluI	AGCT	2 cut(s)	308, 1003
Alw26I	GTCTC	5 cut(s)	185, 290, 328, 540, 1104
AlwI	GGATC	1 cut(s)	141
Ama87I	CYCGRG	1 cut(s)	96
AoxI	GGCC	3 cut(s)	126, 164, 472
ApaI	GGGCCC	1 cut(s)	476
ApeKI	GCWGC	2 cut(s)	817, 992
ApoI	RAATTY	1 cut(s)	596
AspLEI	GCGC	2 cut(s)	399, 808
AspS9I	GGNCC	4 cut(s)	100, 164, 472, 473
AsuHPI	GGTGA	3 cut(s)	535, 674, 1287
AvaI	CYCGRG	1 cut(s)	96
AvaII	GGWCC	1 cut(s)	100
BaeGI	GKGCMC	1 cut(s)	476
BalI	TGGCCA	1 cut(s)	128
BanI	GGYRCC	1 cut(s)	1371
BanII	GRGCYC	1 cut(s)	476
BauI	CACGAG	1 cut(s)	1360
BbsI	GAAGAC	1 cut(s)	804
BbvI	GCAGC	2 cut(s)	804, 979
BccI	CCATC	4 cut(s)	197, 238, 247, 1192
BciT130I	CCWGG	1 cut(s)	547
BclI	TGATCA	1 cut(s)	105
BcoDI	GTCTC	5 cut(s)	185, 290, 328, 540, 1104
BcuI	ACTAGT	1 cut(s)	671
BfaI	CTAG	2 cut(s)	354, 672
BfmI	CTRYAG	1 cut(s)	1060
BfoI	RGCGCY	1 cut(s)	400
BfuAI	ACCTGC	1 cut(s)	1171
BisI	GCNGC	2 cut(s)	818, 993
BlsI	GCNGC	2 cut(s)	819, 994
BmcAI	AGTACT	1 cut(s)	94
Bme1390I	CCNGG	1 cut(s)	547
Bme18I	GGWCC	1 cut(s)	100
BmeRI	GACNNNNNGTC	1 cut(s)	532
BmeT110I	CYCGRG	1 cut(s)	96
BmgT120I	GGNCC	4 cut(s)	100, 164, 472, 473
BmiI	GGNNCC	5 cut(s)	101, 473, 474, 1227, 1373
BmrFI	CCNGG	1 cut(s)	547
BmrI	ACTGGG	1 cut(s)	841
BmsI	GCATC	3 cut(s)	269, 337, 1354
BmuI	ACTGGG	1 cut(s)	841
BpiI	GAAGAC	1 cut(s)	804
BplI	GAGNNNNNCTC	2 cut(s)	1133, 1165
BpuEI	CTTGAG	2 cut(s)	182, 288
BsaI	GGTCTC	1 cut(s)	540
BsaJI	CCNNGG	2 cut(s)	129, 974
BsaXI	ACNNNNNCTCC	2 cut(s)	1324, 1354
Bsc4I	CCNNNNNNNGG	3 cut(s)	173, 273, 1082
Bse1I	ACTGG	2 cut(s)	536, 836
Bse3DI	GCAATG	2 cut(s)	562, 708
BseBI	CCWGG	1 cut(s)	547
BseDI	CCNNGG	2 cut(s)	129, 974
BseGI	GGATG	7 cut(s)	189, 230, 260, 292, 453, 1184, 1345
BseLI	CCNNNNNNNGG	3 cut(s)	173, 273, 1082
BseMI	GCAATG	2 cut(s)	562, 708
BseMII	CTCAG	1 cut(s)	227
BseNI	ACTGG	2 cut(s)	536, 836
BseRI	GAGGAG	3 cut(s)	874, 1341, 1344
BseSI	GKGCMC	1 cut(s)	476
BseXI	GCAGC	2 cut(s)	804, 979
BsgI	GTGCAG	2 cut(s)	423, 912
BshFI	GGCC	3 cut(s)	128, 166, 474
BshNI	GGYRCC	1 cut(s)	1371
BsiHKCI	CYCGRG	1 cut(s)	96
BslI	CCNNNNNNNGG	3 cut(s)	173, 273, 1082
BsmAI	GTCTC	5 cut(s)	185, 290, 328, 540, 1104
BsmBI	CGTCTC	1 cut(s)	290
BsnI	GGCC	3 cut(s)	128, 166, 474
Bso31I	GGTCTC	1 cut(s)	540
BsoBI	CYCGRG	1 cut(s)	96
Bsp120I	GGGCCC	1 cut(s)	472
Bsp1286I	GDGCHC	1 cut(s)	476
Bsp1407I	TGTACA	1 cut(s)	1379
Bsp143I	GATC	6 cut(s)	6, 63, 105, 133, 450, 1364
BspACI	CCGC	2 cut(s)	193, 1343
BspANI	GGCC	3 cut(s)	128, 166, 474
BspCNI	CTCAG	1 cut(s)	226
BspLI	GGNNCC	5 cut(s)	101, 473, 474, 1227, 1373
BspMI	ACCTGC	1 cut(s)	1171
BspPI	GGATC	1 cut(s)	141
BspQI	GCTCTTC	1 cut(s)	315
BspT107I	GGYRCC	1 cut(s)	1371
BspTNI	GGTCTC	1 cut(s)	540
BsrDI	GCAATG	2 cut(s)	562, 708
BsrGI	TGTACA	1 cut(s)	1379
BsrI	ACTGG	2 cut(s)	536, 836
BssECI	CCNNGG	2 cut(s)	129, 974
BssMI	GATC	6 cut(s)	6, 63, 105, 133, 450, 1364
BssSI	CACGAG	1 cut(s)	1360
BssT1I	CCWWGG	2 cut(s)	129, 974
Bst2BI	CACGAG	1 cut(s)	1360
Bst2UI	CCWGG	1 cut(s)	547
Bst4CI	ACNGT	2 cut(s)	37, 648
Bst6I	CTCTTC	3 cut(s)	188, 315, 1081
BstAUI	TGTACA	1 cut(s)	1379
BstC8I	GCNNGC	1 cut(s)	395
BstDEI	CTNAG	2 cut(s)	213, 1069
BstF5I	GGATG	7 cut(s)	189, 230, 260, 292, 453, 1184, 1345
BstH2I	RGCGCY	1 cut(s)	400
BstHHI	GCGC	2 cut(s)	399, 808
BstKTI	GATC	6 cut(s)	9, 66, 108, 136, 453, 1367
BstMAI	GTCTC	5 cut(s)	185, 290, 328, 540, 1104
BstMBI	GATC	6 cut(s)	6, 63, 105, 133, 450, 1364
BstMWI	GCNNNNNNNGC	2 cut(s)	814, 1065
BstNI	CCWGG	1 cut(s)	547
BstNSI	RCATGY	1 cut(s)	1109
BstSCI	CCNGG	1 cut(s)	545
BstSFI	CTRYAG	1 cut(s)	1060
BstSLI	GKGCMC	1 cut(s)	476
BstV1I	GCAGC	2 cut(s)	804, 979
BstV2I	GAAGAC	1 cut(s)	804
BstX2I	RGATCY	2 cut(s)	6, 133
BstYI	RGATCY	2 cut(s)	6, 133
BsuRI	GGCC	3 cut(s)	128, 166, 474
BtsCI	GGATG	7 cut(s)	189, 230, 260, 292, 453, 1184, 1345
BtsI	GCAGTG	2 cut(s)	435, 924
BtsIMutI	CAGTG	4 cut(s)	11, 42, 435, 924
BveI	ACCTGC	1 cut(s)	1171
Cac8I	GCNNGC	1 cut(s)	395
CfoI	GCGC	2 cut(s)	399, 808
Cfr13I	GGNCC	4 cut(s)	100, 164, 472, 473
CseI	GACGC	1 cut(s)	272
CsiI	ACCWGGT	1 cut(s)	545
Csp6I	GTAC	4 cut(s)	27, 93, 429, 1380
CviAII	CATG	4 cut(s)	168, 726, 1106, 1383
CviJI	RGCY	8 cut(s)	128, 166, 229, 308, 474, 1003, 1059, 1249
CviKI_1	RGCY	8 cut(s)	128, 166, 229, 308, 474, 1003, 1059, 1249
CviQI	GTAC	4 cut(s)	27, 93, 429, 1380
DdeI	CTNAG	2 cut(s)	213, 1069
DpnI	GATC	6 cut(s)	8, 65, 107, 135, 452, 1366
DpnII	GATC	6 cut(s)	6, 63, 105, 133, 450, 1364
DriI	GACNNNNNGTC	1 cut(s)	532
EaeI	YGGCCR	1 cut(s)	126
Eam1104I	CTCTTC	3 cut(s)	188, 315, 1081
Eam1105I	GACNNNNNGTC	1 cut(s)	532
EarI	CTCTTC	3 cut(s)	188, 315, 1081
EciI	GGCGGA	1 cut(s)	182
Eco130I	CCWWGG	2 cut(s)	129, 974
Eco24I	GRGCYC	1 cut(s)	476
Eco31I	GGTCTC	1 cut(s)	540
Eco47I	GGWCC	1 cut(s)	100
Eco57I	CTGAAG	1 cut(s)	594
Eco88I	CYCGRG	1 cut(s)	96
EcoO109I	RGGNCCY	2 cut(s)	100, 472
EcoRII	CCWGG	1 cut(s)	545
EcoT14I	CCWWGG	2 cut(s)	129, 974
EcoT38I	GRGCYC	1 cut(s)	476
ErhI	CCWWGG	2 cut(s)	129, 974
Esp3I	CGTCTC	1 cut(s)	290
FaeI	CATG	4 cut(s)	171, 729, 1109, 1386
FatI	CATG	4 cut(s)	167, 725, 1105, 1382
FauNDI	CATATG	2 cut(s)	955, 988
FbaI	TGATCA	1 cut(s)	105
Fnu4HI	GCNGC	2 cut(s)	818, 993
FokI	GGATG	7 cut(s)	176, 217, 247, 279, 440, 1171, 1332
FriOI	GRGCYC	1 cut(s)	476
Fsp4HI	GCNGC	2 cut(s)	818, 993
FspBI	CTAG	2 cut(s)	354, 672
FspI	TGCGCA	1 cut(s)	807
GlaI	GCGC	2 cut(s)	398, 807
GluI	GCNGC	2 cut(s)	818, 993
HaeII	RGCGCY	1 cut(s)	400
HaeIII	GGCC	3 cut(s)	128, 166, 474
HgaI	GACGC	1 cut(s)	272
HhaI	GCGC	2 cut(s)	399, 808
Hin1II	CATG	4 cut(s)	171, 729, 1109, 1386
Hin6I	GCGC	2 cut(s)	397, 806
HinP1I	GCGC	2 cut(s)	397, 806
HincII	GTYRAC	1 cut(s)	222
HindII	GTYRAC	1 cut(s)	222
HindIII	AAGCTT	1 cut(s)	1001
HinfI	GANTC	2 cut(s)	16, 1015
HphI	GGTGA	3 cut(s)	535, 674, 1287
Hpy166II	GTNNAC	3 cut(s)	222, 252, 418
Hpy188I	TCNGA	6 cut(s)	63, 379, 463, 574, 1014, 1225
Hpy188III	TCNNGA	3 cut(s)	103, 199, 1101
Hpy8I	GTNNAC	3 cut(s)	222, 252, 418
Hpy99I	CGWCG	2 cut(s)	145, 318
HpyAV	CCTTC	2 cut(s)	888, 1302
HpyCH4III	ACNGT	2 cut(s)	37, 648
HpyCH4V	TGCA	7 cut(s)	260, 440, 448, 562, 567, 892, 929
HpyF10VI	GCNNNNNNNGC	2 cut(s)	814, 1065
HpyF3I	CTNAG	2 cut(s)	213, 1069
Hsp92II	CATG	4 cut(s)	171, 729, 1109, 1386
HspAI	GCGC	2 cut(s)	397, 806
Ksp22I	TGATCA	1 cut(s)	105
Kzo9I	GATC	6 cut(s)	6, 63, 105, 133, 450, 1364
LguI	GCTCTTC	1 cut(s)	315
LmnI	GCTCC	1 cut(s)	404
Lsp1109I	GCAGC	2 cut(s)	804, 979
LweI	GCATC	3 cut(s)	269, 337, 1354
MabI	ACCWGGT	1 cut(s)	545
MaeI	CTAG	2 cut(s)	354, 672
MaeIII	GTNAC	1 cut(s)	650
MalI	GATC	6 cut(s)	8, 65, 107, 135, 452, 1366
MboI	GATC	6 cut(s)	6, 63, 105, 133, 450, 1364
MboII	GAAGA	6 cut(s)	16, 128, 175, 302, 804, 1098
MflI	RGATCY	2 cut(s)	6, 133
MhlI	GDGCHC	1 cut(s)	476
MlsI	TGGCCA	1 cut(s)	128
MluCI	AATT	8 cut(s)	386, 596, 620, 719, 780, 914, 940, 1242
MluNI	TGGCCA	1 cut(s)	128
MlyI	GAGTC	1 cut(s)	1024
Mox20I	TGGCCA	1 cut(s)	128
MscI	TGGCCA	1 cut(s)	128
MseI	TTAA	5 cut(s)	338, 504, 779, 863, 980
MslI	CAYNNNNRTG	3 cut(s)	370, 462, 958
Msp20I	TGGCCA	1 cut(s)	128
MspR9I	CCNGG	1 cut(s)	547
MvaI	CCWGG	1 cut(s)	547
MwoI	GCNNNNNNNGC	2 cut(s)	814, 1065
NdeI	CATATG	2 cut(s)	955, 988
NdeII	GATC	6 cut(s)	6, 63, 105, 133, 450, 1364
NlaIII	CATG	4 cut(s)	171, 729, 1109, 1386
NlaIV	GGNNCC	5 cut(s)	101, 473, 474, 1227, 1373
NmuCI	GTSAC	1 cut(s)	650
NsbI	TGCGCA	1 cut(s)	807
NspI	RCATGY	1 cut(s)	1109
OliI	CACNNNNGTG	1 cut(s)	370
PciI	ACATGT	1 cut(s)	1105
PciSI	GCTCTTC	1 cut(s)	315
PfeI	GAWTC	1 cut(s)	16
PflMI	CCANNNNNTGG	2 cut(s)	173, 273
PkrI	GCNGC	2 cut(s)	819, 994
PleI	GAGTC	1 cut(s)	1023
PpsI	GAGTC	1 cut(s)	1023
PpuMI	RGGWCCY	1 cut(s)	100
PscI	ACATGT	1 cut(s)	1105
Psp5II	RGGWCCY	1 cut(s)	100
Psp6I	CCWGG	1 cut(s)	545
PspGI	CCWGG	1 cut(s)	545
PspN4I	GGNNCC	5 cut(s)	101, 473, 474, 1227, 1373
PspOMI	GGGCCC	1 cut(s)	472
PspPI	GGNCC	4 cut(s)	100, 164, 472, 473
PspPPI	RGGWCCY	1 cut(s)	100
PsuI	RGATCY	2 cut(s)	6, 133
RsaI	GTAC	4 cut(s)	28, 94, 430, 1381
RsaNI	GTAC	4 cut(s)	27, 93, 429, 1380
RseI	CAYNNNNRTG	3 cut(s)	370, 462, 958
SapI	GCTCTTC	1 cut(s)	315
SaqAI	TTAA	5 cut(s)	338, 504, 779, 863, 980
SatI	GCNGC	2 cut(s)	818, 993
Sau3AI	GATC	6 cut(s)	6, 63, 105, 133, 450, 1364
Sau96I	GGNCC	4 cut(s)	100, 164, 472, 473
ScaI	AGTACT	1 cut(s)	94
SchI	GAGTC	1 cut(s)	1024
ScrFI	CCNGG	1 cut(s)	547
SduI	GDGCHC	1 cut(s)	476
SexAI	ACCWGGT	1 cut(s)	545
SfaNI	GCATC	3 cut(s)	269, 337, 1354
SfcI	CTRYAG	1 cut(s)	1060
SinI	GGWCC	1 cut(s)	100
SmiMI	CAYNNNNRTG	3 cut(s)	370, 462, 958
SmlI	CTYRAG	2 cut(s)	197, 303
SmoI	CTYRAG	2 cut(s)	197, 303
SpeI	ACTAGT	1 cut(s)	671
Sse9I	AATT	8 cut(s)	386, 596, 620, 719, 780, 914, 940, 1242
SsiI	CCGC	2 cut(s)	193, 1343
SspMI	CTAG	2 cut(s)	354, 672
StyD4I	CCNGG	1 cut(s)	545
StyI	CCWWGG	2 cut(s)	129, 974
TaaI	ACNGT	2 cut(s)	37, 648
TaqI	TCGA	2 cut(s)	793, 1102
TaqII	GACCGA	1 cut(s)	278
TasI	AATT	8 cut(s)	386, 596, 620, 719, 780, 914, 940, 1242
TatI	WGTACW	3 cut(s)	92, 428, 1379
TfiI	GAWTC	1 cut(s)	16
Tru1I	TTAA	5 cut(s)	338, 504, 779, 863, 980
Tru9I	TTAA	5 cut(s)	338, 504, 779, 863, 980
TscAI	CASTG	4 cut(s)	18, 42, 442, 931
TseFI	GTSAC	1 cut(s)	650
TseI	GCWGC	2 cut(s)	817, 992
Tsp45I	GTSAC	1 cut(s)	650
TspDTI	ATGAA	3 cut(s)	17, 886, 1134
TspGWI	ACGGA	1 cut(s)	129
TspRI	CASTG	4 cut(s)	18, 42, 442, 931
Van91I	CCANNNNNTGG	2 cut(s)	173, 273
VpaK11BI	GGWCC	1 cut(s)	100
XapI	RAATTY	1 cut(s)	596
XceI	RCATGY	1 cut(s)	1109
XcmI	CCANNNNNNNNNTGG	1 cut(s)	828
XspI	CTAG	2 cut(s)	354, 672
ZrmI	AGTACT	1 cut(s)	94

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.