FvH4_3g17511

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
11153523 .. 11154119
597 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g17511.t1

Sequence Viewer

Length: 597 bp
ATGGGATACAGTCTTTGGAAGGAGGAAAGAGACTGTCTCCAATGGCTAAACTGCAAGCCACCAAACTCAATTGTTTATGTCAATTTTGGAAGTATTGTGGTTTTGACACCAGAACAGCTTCTCGAGTTTGGTTGGGGACTTGCGAATACCAAGCTTCCTTTCTTCTGGGTTATTAGGCCAGATTTGGTTGTCGGAAAATCAGCAATCTTGCCACCAGAGTTTGAAGCTGAAACCAAAGACAGAGGCCTAATAGCAAGTTGGTGCCCCCAAGAAGAAGTCCTAAACCATCCATCAGTGGGAGGGTTTTTAACACACTGTGGTTGGAATTCAACCATTGAGAGTATTACAGCTGGAGTGCCAATGCTGTGTTGGCCATTCTGTGGAGACCAGCAAACAAACAGTTACAGTTGCTGTGAATGGGGAATTGGCATGGAGATCGACACAGATGTCAAGAGAGACAATGTGGAGAAGCTTGTGAAGGAGTTAATGGAGGGAGATAAGGGCGAGAAAATGAGAAGCAAGTGTCTGGAGTGGAAGAAACTTCAGAGGAAGCCACTGCTCCGCATGGTTCTTCATCAAAAAATTTGGAAAATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

199

Amino Acids

22.75

Weight (kDa)

5.98

Isoelectric Point (pI)

36.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 20 - 172 4e-24 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 446
AccB1I GGYRCC 1 cut(s) 261
AccB7I CCANNNNNTGG 1 cut(s) 380
AciI CCGC 1 cut(s) 562
AcoI YGGCCR 1 cut(s) 371
AcsI RAATTY 3 cut(s) 325, 582, 591
AcuI CTGAAG 1 cut(s) 527
AdeI CACNNNGTG 1 cut(s) 317
AfiI CCNNNNNNNGG 2 cut(s) 296, 380
AgsI TTSAA 2 cut(s) 224, 330
AjuI GAANNNNNNNTTGG 4 cut(s) 143, 175, 408, 440
AluBI AGCT 5 cut(s) 118, 154, 227, 350, 472
AluI AGCT 5 cut(s) 118, 154, 227, 350, 472
Alw26I GTCTC 4 cut(s) 24, 41, 378, 450
AlwNI CAGNNNCTG 1 cut(s) 411
Ama87I CYCGRG 1 cut(s) 122
AoxI GGCC 3 cut(s) 176, 244, 371
ApoI RAATTY 3 cut(s) 325, 582, 591
Asp700I GAANNNNTTC 1 cut(s) 117
AvaI CYCGRG 1 cut(s) 122
BaeGI GKGCMC 1 cut(s) 266
BalI TGGCCA 1 cut(s) 373
BanI GGYRCC 1 cut(s) 261
BccI CCATC 2 cut(s) 294, 298
BcgI CGANNNNNNTGC 2 cut(s) 418, 452
BcoDI GTCTC 4 cut(s) 24, 41, 378, 450
BmeT110I CYCGRG 1 cut(s) 122
BmiI GGNNCC 1 cut(s) 263
BplI GAGNNNNNCTC 2 cut(s) 21, 53
BpmI CTGGAG 2 cut(s) 372, 548
BsaI GGTCTC 1 cut(s) 378
Bsc4I CCNNNNNNNGG 2 cut(s) 296, 380
BseGI GGATG 1 cut(s) 286
BseLI CCNNNNNNNGG 2 cut(s) 296, 380
BseSI GKGCMC 1 cut(s) 266
BshFI GGCC 3 cut(s) 178, 246, 373
BshNI GGYRCC 1 cut(s) 261
BsiHKCI CYCGRG 1 cut(s) 122
BslFI GGGAC 1 cut(s) 150
BslI CCNNNNNNNGG 2 cut(s) 296, 380
BsmAI GTCTC 4 cut(s) 24, 41, 378, 450
BsmFI GGGAC 1 cut(s) 150
BsnI GGCC 3 cut(s) 178, 246, 373
Bso31I GGTCTC 1 cut(s) 378
BsoBI CYCGRG 1 cut(s) 122
Bsp1286I GDGCHC 1 cut(s) 266
Bsp143I GATC 1 cut(s) 435
BspACI CCGC 1 cut(s) 562
BspANI GGCC 3 cut(s) 178, 246, 373
BspLI GGNNCC 1 cut(s) 263
BspT107I GGYRCC 1 cut(s) 261
BspTNI GGTCTC 1 cut(s) 378
BssMI GATC 1 cut(s) 435
Bst4CI ACNGT 5 cut(s) 11, 35, 317, 401, 407
BstC8I GCNNGC 1 cut(s) 56
BstF5I GGATG 1 cut(s) 286
BstKTI GATC 1 cut(s) 438
BstMAI GTCTC 4 cut(s) 24, 41, 378, 450
BstMBI GATC 1 cut(s) 435
BstMWI GCNNNNNNNGC 1 cut(s) 370
BstSLI GKGCMC 1 cut(s) 266
BsuRI GGCC 3 cut(s) 178, 246, 373
BtsCI GGATG 1 cut(s) 286
BtsI GCAGTG 1 cut(s) 554
BtsIMutI CAGTG 3 cut(s) 300, 313, 554
Cac8I GCNNGC 1 cut(s) 56
CaiI CAGNNNCTG 1 cut(s) 411
CviAII CATG 2 cut(s) 430, 565
DpnI GATC 1 cut(s) 437
DpnII GATC 1 cut(s) 435
DraIII CACNNNGTG 1 cut(s) 317
DrdI GACNNNNNNGTC 1 cut(s) 446
DseDI GACNNNNNNGTC 1 cut(s) 446
EaeI YGGCCR 1 cut(s) 371
Eco147I AGGCCT 1 cut(s) 246
Eco31I GGTCTC 1 cut(s) 378
Eco57I CTGAAG 1 cut(s) 527
Eco88I CYCGRG 1 cut(s) 122
EcoRI GAATTC 1 cut(s) 325
FaeI CATG 2 cut(s) 433, 568
FaiI YATR 3 cut(s) 78, 431, 566
FaqI GGGAC 1 cut(s) 150
FatI CATG 2 cut(s) 429, 564
FokI GGATG 1 cut(s) 273
GsuI CTGGAG 2 cut(s) 372, 548
HaeIII GGCC 3 cut(s) 178, 246, 373
Hin1II CATG 2 cut(s) 433, 568
HindIII AAGCTT 2 cut(s) 152, 470
Hpy188I TCNGA 2 cut(s) 194, 546
Hpy188III TCNNGA 3 cut(s) 122, 451, 527
HpyAV CCTTC 2 cut(s) 13, 472
HpyCH4III ACNGT 5 cut(s) 11, 35, 317, 401, 407
HpyCH4V TGCA 1 cut(s) 54
HpyF10VI GCNNNNNNNGC 1 cut(s) 370
Hsp92II CATG 2 cut(s) 433, 568
Kzo9I GATC 1 cut(s) 435
LmnI GCTCC 1 cut(s) 564
LpnPI CCDG 7 cut(s) 123, 151, 192, 228, 336, 401, 512
MaeIII GTNAC 1 cut(s) 401
MalI GATC 1 cut(s) 437
MboI GATC 1 cut(s) 435
MboII GAAGA 4 cut(s) 154, 284, 547, 563
MfeI CAATTG 1 cut(s) 69
MhlI GDGCHC 1 cut(s) 266
MlsI TGGCCA 1 cut(s) 373
MluCI AATT 6 cut(s) 69, 82, 325, 423, 582, 591
MluNI TGGCCA 1 cut(s) 373
MmeI TCCRAC 2 cut(s) 172, 302
MnlI CCTC 5 cut(s) 16, 236, 293, 484, 540
Mox20I TGGCCA 1 cut(s) 373
MroXI GAANNNNTTC 1 cut(s) 117
MscI TGGCCA 1 cut(s) 373
MseI TTAA 2 cut(s) 308, 485
Msp20I TGGCCA 1 cut(s) 373
MspA1I CMGCKG 1 cut(s) 350
MunI CAATTG 1 cut(s) 69
MwoI GCNNNNNNNGC 1 cut(s) 370
NdeII GATC 1 cut(s) 435
NlaIII CATG 2 cut(s) 433, 568
NlaIV GGNNCC 1 cut(s) 263
PaeR7I CTCGAG 1 cut(s) 122
PceI AGGCCT 1 cut(s) 246
PdmI GAANNNNTTC 1 cut(s) 117
PflMI CCANNNNNTGG 1 cut(s) 380
PspN4I GGNNCC 1 cut(s) 263
PstNI CAGNNNCTG 1 cut(s) 411
PvuII CAGCTG 1 cut(s) 350
SaqAI TTAA 2 cut(s) 308, 485
Sau3AI GATC 1 cut(s) 435
SduI GDGCHC 1 cut(s) 266
SetI ASST 5 cut(s) 120, 156, 229, 352, 474
Sfr274I CTCGAG 1 cut(s) 122
SlaI CTCGAG 1 cut(s) 122
SmlI CTYRAG 1 cut(s) 122
SmoI CTYRAG 1 cut(s) 122
Sse9I AATT 6 cut(s) 69, 82, 325, 423, 582, 591
SseBI AGGCCT 1 cut(s) 246
SsiI CCGC 1 cut(s) 562
StuI AGGCCT 1 cut(s) 246
TaaI ACNGT 5 cut(s) 11, 35, 317, 401, 407
TaqI TCGA 2 cut(s) 123, 438
TasI AATT 6 cut(s) 69, 82, 325, 423, 582, 591
Tru1I TTAA 2 cut(s) 308, 485
Tru9I TTAA 2 cut(s) 308, 485
TscAI CASTG 3 cut(s) 300, 320, 561
TspDTI ATGAA 1 cut(s) 563
TspRI CASTG 3 cut(s) 300, 320, 561
Van91I CCANNNNNTGG 1 cut(s) 380
XapI RAATTY 3 cut(s) 325, 582, 591
XcmI CCANNNNNNNNNTGG 1 cut(s) 366
XhoI CTCGAG 1 cut(s) 122
XmnI GAANNNNTTC 1 cut(s) 117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.