FvH4_6g39871

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000097
Physical Location & Seq
Forward (+)
31497570 .. 31501143
3574 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g39871.t2

Sequence Viewer

Length: 1464 bp
ATGAGTTCCATAGCAGTAGTCAATAAGCCTCATGCTGTATGCGTTCCTTTGCCATTTCAGAGCCATATAAAGGCAATGTTTCAGTTTGCTCAACTCCTCCACCAAAGAGGTTTTCATATTACCTTTGTCAACACAGAGTTCAACCACAGACGCTTTCTTAAATCTCTTGGACCCAACTCTCTTGATCACTTCCTGGATTTTCGGTTTGAAACTATTCCAGACGGCCTTCCAATTTCAGATGAAAAGGACTCCCAGGAAATGACTTTGGTGTTTGATTCTGTTAGAAAAAATTTTGTGGCTCCATTCCGTAACCTCCTCAACAAACTGAATGGTGCCAATATGAATCTTCCGGTGACTAGTATTGTCTCGGATGGCTTCATGACGTTCACCATCACAGTTGCCGAAGAACTTGGAATTCCTATAGCACACTTCTTTGCTTTGGCGGCAGTCGGATTTATGAGCTTGAAATCAATTCCCACTTTGGTGGAGAAAGGATTTGCACCGCTCAAAGATGAGAGCTGCATAACAAATGACTTTTTGGACACGGCAATAGACTGGGTTCCGGGACTGAAAGATACACGTTTAAGGGATCTCTCAGGCGCCTGGAGAACTACAAACCCTGATGAAATCTCATTTAACTTTGTTTTGGAAGCAGTGGAGGGAGCTTATAAAGCTTCAGCAGTTATTGTTCATACTTTTGAGACATTGGAGGCAGATGTTTCGGATGCTCTCTCTAGCACTTCATCTATGCTTCCACCTGTTTACGCCATCGGTCCTCTCCAATTACTTCTCAATCAGATACCGGAACACCCTTTGAAGTCTGTGGGATATAGTTTATGGAAAGAAGAAACTGAGTGCCTCCAATGGCTACATGGCAAGGCACCAAACTCAGTTGTGTATGTGAATTTTGGGAGTGTAGTGGTCATGACACCACAACAGCTTATGGAGTTTGCTTGGGGACTTGCAAATAGCAAGCTTCCATTCTTGTGGGTTATTAGACCTGATTTGATAGCTGGTGAATCCGCGATTTTGCCGCCGGAGTTTGTAGCTGAAACAAAGGAAAGAGGTCTAATAGCAAGTTGGTGTCCACAAGAGCAAGTGCTCAACCATCCAACAGTTGGAGGATTTTTGACACACAGCGGTTGGAATTCAACCATGGAGAGTATTTCTGCCGGAGTGCCTATGCTCTGTTGGCCATTATTGGGCGACCAGCGGATCAACTGTCGCTACACTTGCTACGAGTGGGGCATTGGCATGGAAATCAGTAATGATGTGAAGAGAGACAAGGTAAAGAAGCTTGTTGAAGAGTTAATGAAAGGAGAGAAGGGTAAGGAACTGAAAAATAAGGTCATGATTTGGAAGAAACTAGCAGAGGATGCCTCTTCTCCGCTTGGTTCTTCACATATAGCCTTAGACAACTTGGTCAATCAAGTGTTACTAAGAAAAGCTAGATATTTCTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

488

Amino Acids

54.4

Weight (kDa)

5.84

Isoelectric Point (pI)

33.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 13 - 181 3.4e-06 Glycosyltransferase, N-terminal domain
UDPGT PF00201 67 - 458 3.6e-29 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 669
AasI GACNNNNNNGTC 1 cut(s) 1421
AccB1I GGYRCC 3 cut(s) 332, 599, 880
AccB7I CCANNNNNTGG 1 cut(s) 1118
AccBSI CCGCTC 1 cut(s) 505
AccII CGCG 1 cut(s) 1025
AciI CCGC 7 cut(s) 443, 503, 1023, 1034, 1140, 1213, 1388
AclWI GGATC 2 cut(s) 597, 1223
AcoI YGGCCR 1 cut(s) 1193
AcsI RAATTY 4 cut(s) 289, 414, 904, 1147
AcuI CTGAAG 1 cut(s) 660
AcyI GRCGYC 1 cut(s) 600
AfiI CCNNNNNNNGG 3 cut(s) 70, 1118, 1202
AflIII ACRYGT 1 cut(s) 578
AgsI TTSAA 6 cut(s) 142, 209, 466, 817, 1152, 1304
AhlI ACTAGT 1 cut(s) 356
AjnI CCWGG 3 cut(s) 192, 252, 602
AjuI GAANNNNNNNTTGG 2 cut(s) 96, 128
AleI CACNNNNGTG 1 cut(s) 482
Alw21I GWGCWC 1 cut(s) 1104
Alw26I GTCTC 3 cut(s) 370, 695, 1275
AlwI GGATC 2 cut(s) 597, 1223
AoxI GGCC 2 cut(s) 223, 1193
ApeKI GCWGC 1 cut(s) 519
ApoI RAATTY 4 cut(s) 289, 414, 904, 1147
Asp700I GAANNNNTTC 1 cut(s) 213
AspLEI GCGC 1 cut(s) 602
AspS9I GGNCC 2 cut(s) 170, 773
AsuC2I CCSGG 1 cut(s) 564
AsuHPI GGTGA 3 cut(s) 364, 379, 1028
AvaII GGWCC 2 cut(s) 170, 773
BalI TGGCCA 1 cut(s) 1195
BanI GGYRCC 3 cut(s) 332, 599, 880
Bbv12I GWGCWC 1 cut(s) 1104
BbvI GCAGC 1 cut(s) 506
BccI CCATC 4 cut(s) 365, 398, 776, 1116
BceAI ACGGC 2 cut(s) 238, 561
BcgI CGANNNNNNTGC 2 cut(s) 702, 736
BciT130I CCWGG 3 cut(s) 194, 254, 604
BclI TGATCA 1 cut(s) 184
BcnI CCSGG 1 cut(s) 564
BcoDI GTCTC 3 cut(s) 370, 695, 1275
BcuI ACTAGT 1 cut(s) 356
BfaI CTAG 4 cut(s) 357, 735, 1367, 1449
BfmI CTRYAG 1 cut(s) 420
BfoI RGCGCY 1 cut(s) 603
BisI GCNGC 3 cut(s) 444, 520, 1034
BlsI GCNGC 3 cut(s) 445, 521, 1035
Bme1390I CCNGG 4 cut(s) 194, 254, 564, 604
Bme18I GGWCC 2 cut(s) 170, 773
BmgT120I GGNCC 2 cut(s) 170, 773
BmiI GGNNCC 6 cut(s) 172, 300, 334, 561, 601, 882
BmrFI CCNGG 4 cut(s) 194, 254, 564, 604
BmrI ACTGGG 1 cut(s) 565
BmsI GCATC 2 cut(s) 715, 1366
BmuI ACTGGG 1 cut(s) 565
BplI GAGNNNNNCTC 2 cut(s) 1364, 1396
BpmI CTGGAG 1 cut(s) 625
BpuMI CCSGG 1 cut(s) 564
BsaHI GRCGYC 1 cut(s) 600
BsaJI CCNNGG 2 cut(s) 252, 1155
BsaWI WCCGGW 2 cut(s) 349, 802
Bsc4I CCNNNNNNNGG 3 cut(s) 70, 1118, 1202
Bse1I ACTGG 1 cut(s) 560
Bse3DI GCAATG 1 cut(s) 81
BseBI CCWGG 3 cut(s) 194, 254, 604
BseDI CCNNGG 2 cut(s) 252, 1155
BseGI GGATG 4 cut(s) 376, 730, 1108, 1381
BseLI CCNNNNNNNGG 3 cut(s) 70, 1118, 1202
BseMI GCAATG 1 cut(s) 81
BseMII CTCAG 3 cut(s) 609, 843, 903
BseNI ACTGG 1 cut(s) 560
BseRI GAGGAG 2 cut(s) 86, 305
BseXI GCAGC 1 cut(s) 506
Bsh1236I CGCG 1 cut(s) 1025
BshFI GGCC 2 cut(s) 225, 1195
BshNI GGYRCC 3 cut(s) 332, 599, 880
BsiHKAI GWGCWC 1 cut(s) 1104
BsiSI CCGG 5 cut(s) 350, 563, 803, 1037, 1173
BslFI GGGAC 2 cut(s) 579, 972
BslI CCNNNNNNNGG 3 cut(s) 70, 1118, 1202
BsmAI GTCTC 3 cut(s) 370, 695, 1275
BsmFI GGGAC 2 cut(s) 579, 972
BsnI GGCC 2 cut(s) 225, 1195
Bsp1286I GDGCHC 1 cut(s) 1104
Bsp143I GATC 3 cut(s) 184, 589, 1215
Bsp19I CCATGG 1 cut(s) 1155
BspACI CCGC 7 cut(s) 443, 503, 1023, 1034, 1140, 1213, 1388
BspANI GGCC 2 cut(s) 225, 1195
BspCNI CTCAG 3 cut(s) 608, 844, 902
BspFNI CGCG 1 cut(s) 1025
BspHI TCATGA 3 cut(s) 378, 924, 1350
BspLI GGNNCC 6 cut(s) 172, 300, 334, 561, 601, 882
BspPI GGATC 2 cut(s) 597, 1223
BspT107I GGYRCC 3 cut(s) 332, 599, 880
BsrBI CCGCTC 1 cut(s) 505
BsrDI GCAATG 1 cut(s) 81
BsrI ACTGG 1 cut(s) 560
BssECI CCNNGG 2 cut(s) 252, 1155
BssMI GATC 3 cut(s) 184, 589, 1215
BssNI GRCGYC 1 cut(s) 600
BssT1I CCWWGG 1 cut(s) 1155
Bst2UI CCWGG 3 cut(s) 194, 254, 604
Bst4CI ACNGT 3 cut(s) 397, 1117, 1223
Bst6I CTCTTC 3 cut(s) 1271, 1299, 1387
BstACI GRCGYC 1 cut(s) 600
BstAPI GCANNNNNTGC 1 cut(s) 1376
BstC8I GCNNGC 1 cut(s) 974
BstDEI CTNAG 5 cut(s) 595, 852, 889, 1411, 1439
BstDSI CCRYGG 1 cut(s) 1155
BstF5I GGATG 4 cut(s) 376, 730, 1108, 1381
BstFNI CGCG 1 cut(s) 1025
BstH2I RGCGCY 1 cut(s) 603
BstHHI GCGC 1 cut(s) 602
BstKTI GATC 3 cut(s) 187, 592, 1218
BstMAI GTCTC 3 cut(s) 370, 695, 1275
BstMBI GATC 3 cut(s) 184, 589, 1215
BstMWI GCNNNNNNNGC 5 cut(s) 443, 671, 1192, 1233, 1376
BstNI CCWGG 3 cut(s) 194, 254, 604
BstSCI CCNGG 4 cut(s) 192, 252, 562, 602
BstSFI CTRYAG 1 cut(s) 420
BstUI CGCG 1 cut(s) 1025
BstV1I GCAGC 1 cut(s) 506
BstX2I RGATCY 1 cut(s) 589
BstXI CCANNNNNNTGG 2 cut(s) 484, 987
BstYI RGATCY 1 cut(s) 589
BsuRI GGCC 2 cut(s) 225, 1195
BtgI CCRYGG 1 cut(s) 1155
BtsCI GGATG 4 cut(s) 376, 730, 1108, 1381
BtsI GCAGTG 1 cut(s) 660
BtsIMutI CAGTG 1 cut(s) 660
Cac8I GCNNGC 1 cut(s) 974
CciI TCATGA 3 cut(s) 378, 924, 1350
CfoI GCGC 1 cut(s) 602
Cfr13I GGNCC 2 cut(s) 170, 773
CseI GACGC 1 cut(s) 159
CviAII CATG 7 cut(s) 32, 379, 872, 925, 1156, 1255, 1351
DdeI CTNAG 5 cut(s) 595, 852, 889, 1411, 1439
DinI GGCGCC 1 cut(s) 601
DpnI GATC 3 cut(s) 186, 591, 1217
DpnII GATC 3 cut(s) 184, 589, 1215
DrdI GACNNNNNNGTC 1 cut(s) 1421
DseDI GACNNNNNNGTC 1 cut(s) 1421
EaeI YGGCCR 1 cut(s) 1193
Eam1104I CTCTTC 3 cut(s) 1271, 1299, 1387
EarI CTCTTC 3 cut(s) 1271, 1299, 1387
Eco130I CCWWGG 1 cut(s) 1155
Eco47I GGWCC 2 cut(s) 170, 773
Eco57I CTGAAG 1 cut(s) 660
EcoRI GAATTC 2 cut(s) 414, 1147
EcoRII CCWGG 3 cut(s) 192, 252, 602
EcoT14I CCWWGG 1 cut(s) 1155
EgeI GGCGCC 1 cut(s) 601
EheI GGCGCC 1 cut(s) 601
ErhI CCWWGG 1 cut(s) 1155
FaeI CATG 7 cut(s) 35, 382, 875, 928, 1159, 1258, 1354
FaqI GGGAC 2 cut(s) 579, 972
FatI CATG 7 cut(s) 31, 378, 871, 924, 1155, 1254, 1350
FbaI TGATCA 1 cut(s) 184
Fnu4HI GCNGC 3 cut(s) 444, 520, 1034
FokI GGATG 4 cut(s) 383, 737, 1095, 1388
Fsp4HI GCNGC 3 cut(s) 444, 520, 1034
FspBI CTAG 4 cut(s) 357, 735, 1367, 1449
GlaI GCGC 1 cut(s) 601
GluI GCNGC 3 cut(s) 444, 520, 1034
GsuI CTGGAG 1 cut(s) 625
HaeII RGCGCY 1 cut(s) 603
HaeIII GGCC 2 cut(s) 225, 1195
HapII CCGG 5 cut(s) 350, 563, 803, 1037, 1173
HgaI GACGC 1 cut(s) 159
HhaI GCGC 1 cut(s) 602
Hin1I GRCGYC 1 cut(s) 600
Hin1II CATG 7 cut(s) 35, 382, 875, 928, 1159, 1258, 1354
Hin6I GCGC 1 cut(s) 600
HinP1I GCGC 1 cut(s) 600
HincII GTYRAC 1 cut(s) 130
HindII GTYRAC 1 cut(s) 130
HindIII AAGCTT 3 cut(s) 672, 974, 1295
HinfI GANTC 4 cut(s) 248, 275, 343, 1019
HpaII CCGG 5 cut(s) 350, 563, 803, 1037, 1173
HphI GGTGA 3 cut(s) 364, 379, 1028
Hpy166II GTNNAC 4 cut(s) 130, 387, 763, 1088
Hpy188I TCNGA 6 cut(s) 60, 238, 370, 452, 724, 798
Hpy188III TCNNGA 5 cut(s) 182, 218, 379, 925, 1351
Hpy8I GTNNAC 4 cut(s) 130, 387, 763, 1088
HpyAV CCTTC 2 cut(s) 236, 1318
HpyCH4III ACNGT 3 cut(s) 397, 1117, 1223
HpyCH4IV ACGT 2 cut(s) 383, 580
HpyCH4V TGCA 3 cut(s) 500, 522, 965
HpyF10VI GCNNNNNNNGC 5 cut(s) 443, 671, 1192, 1233, 1376
HpyF3I CTNAG 5 cut(s) 595, 852, 889, 1411, 1439
HpySE526I ACGT 2 cut(s) 383, 580
Hsp92I GRCGYC 1 cut(s) 600
Hsp92II CATG 7 cut(s) 35, 382, 875, 928, 1159, 1258, 1354
HspAI GCGC 1 cut(s) 600
KasI GGCGCC 1 cut(s) 599
Ksp22I TGATCA 1 cut(s) 184
Kzo9I GATC 3 cut(s) 184, 589, 1215
LmnI GCTCC 2 cut(s) 304, 662
Lsp1109I GCAGC 1 cut(s) 506
LweI GCATC 2 cut(s) 715, 1366
MaeI CTAG 4 cut(s) 357, 735, 1367, 1449
MaeII ACGT 2 cut(s) 383, 580
MaeIII GTNAC 3 cut(s) 308, 352, 1434
MalI GATC 3 cut(s) 186, 591, 1217
MbiI CCGCTC 1 cut(s) 505
MboI GATC 3 cut(s) 184, 589, 1215
MboII GAAGA 8 cut(s) 338, 416, 857, 1288, 1316, 1372, 1374, 1389
MflI RGATCY 1 cut(s) 589
MhlI GDGCHC 1 cut(s) 1104
MlsI TGGCCA 1 cut(s) 1195
MluCI AATT 7 cut(s) 231, 289, 414, 471, 782, 904, 1147
MluNI TGGCCA 1 cut(s) 1195
Mly113I GGCGCC 1 cut(s) 600
MlyI GAGTC 1 cut(s) 242
MmeI TCCRAC 4 cut(s) 430, 1099, 1124, 1136
Mox20I TGGCCA 1 cut(s) 1195
MroXI GAANNNNTTC 1 cut(s) 213
MscI TGGCCA 1 cut(s) 1195
MseI TTAA 4 cut(s) 159, 584, 636, 1310
MslI CAYNNNNRTG 3 cut(s) 482, 985, 1253
Msp20I TGGCCA 1 cut(s) 1195
MspA1I CMGCKG 2 cut(s) 1140, 1213
MspI CCGG 5 cut(s) 350, 563, 803, 1037, 1173
MspR9I CCNGG 4 cut(s) 194, 254, 564, 604
MvaI CCWGG 3 cut(s) 194, 254, 604
MvnI CGCG 1 cut(s) 1025
MwoI GCNNNNNNNGC 5 cut(s) 443, 671, 1192, 1233, 1376
NarI GGCGCC 1 cut(s) 600
NciI CCSGG 1 cut(s) 564
NcoI CCATGG 1 cut(s) 1155
NdeII GATC 3 cut(s) 184, 589, 1215
NlaIII CATG 7 cut(s) 35, 382, 875, 928, 1159, 1258, 1354
NlaIV GGNNCC 6 cut(s) 172, 300, 334, 561, 601, 882
NmuCI GTSAC 1 cut(s) 352
OliI CACNNNNGTG 1 cut(s) 482
PagI TCATGA 3 cut(s) 378, 924, 1350
PdmI GAANNNNTTC 1 cut(s) 213
PfeI GAWTC 3 cut(s) 275, 343, 1019
PflMI CCANNNNNTGG 1 cut(s) 1118
PfoI TCCNGGA 2 cut(s) 192, 562
PkrI GCNGC 3 cut(s) 445, 521, 1035
PleI GAGTC 1 cut(s) 242
PluTI GGCGCC 1 cut(s) 603
PpsI GAGTC 1 cut(s) 242
PsiI TTATAA 1 cut(s) 669
Psp6I CCWGG 3 cut(s) 192, 252, 602
PspGI CCWGG 3 cut(s) 192, 252, 602
PspN4I GGNNCC 6 cut(s) 172, 300, 334, 561, 601, 882
PspPI GGNCC 2 cut(s) 170, 773
PsuI RGATCY 1 cut(s) 589
RseI CAYNNNNRTG 3 cut(s) 482, 985, 1253
SaqAI TTAA 4 cut(s) 159, 584, 636, 1310
SatI GCNGC 3 cut(s) 444, 520, 1034
Sau3AI GATC 3 cut(s) 184, 589, 1215
Sau96I GGNCC 2 cut(s) 170, 773
SchI GAGTC 1 cut(s) 242
ScrFI CCNGG 4 cut(s) 194, 254, 564, 604
SduI GDGCHC 1 cut(s) 1104
SfaNI GCATC 2 cut(s) 715, 1366
SfcI CTRYAG 1 cut(s) 420
SfoI GGCGCC 1 cut(s) 601
SinI GGWCC 2 cut(s) 170, 773
SmiMI CAYNNNNRTG 3 cut(s) 482, 985, 1253
SpeI ACTAGT 1 cut(s) 356
Sse9I AATT 7 cut(s) 231, 289, 414, 471, 782, 904, 1147
SsiI CCGC 7 cut(s) 443, 503, 1023, 1034, 1140, 1213, 1388
SspDI GGCGCC 1 cut(s) 599
SspMI CTAG 4 cut(s) 357, 735, 1367, 1449
StyD4I CCNGG 4 cut(s) 192, 252, 562, 602
StyI CCWWGG 1 cut(s) 1155
TaaI ACNGT 3 cut(s) 397, 1117, 1223
TaiI ACGT 2 cut(s) 386, 583
TaqII GACCGA 1 cut(s) 761
TasI AATT 7 cut(s) 231, 289, 414, 471, 782, 904, 1147
TauI GCSGC 2 cut(s) 446, 1036
TfiI GAWTC 3 cut(s) 275, 343, 1019
Tru1I TTAA 4 cut(s) 159, 584, 636, 1310
Tru9I TTAA 4 cut(s) 159, 584, 636, 1310
TscAI CASTG 1 cut(s) 660
TseFI GTSAC 1 cut(s) 352
TseI GCWGC 1 cut(s) 519
Tsp45I GTSAC 1 cut(s) 352
TspDTI ATGAA 8 cut(s) 104, 255, 356, 367, 639, 680, 732, 1328
TspGWI ACGGA 1 cut(s) 296
TspRI CASTG 1 cut(s) 660
Van91I CCANNNNNTGG 1 cut(s) 1118
VpaK11BI GGWCC 2 cut(s) 170, 773
XapI RAATTY 4 cut(s) 289, 414, 904, 1147
XcmI CCANNNNNNNNNTGG 2 cut(s) 869, 1115
XmnI GAANNNNTTC 1 cut(s) 213
XspI CTAG 4 cut(s) 357, 735, 1367, 1449
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.