MD17G1126700.v1.1

transferase activity, transferring hexosyl groups

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0000097
Physical Location & Seq
Reverse (-)
11105056 .. 11105682
627 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1126700.v1.1.491

Sequence Viewer

Length: 627 bp
ATGGAGATTGGAGAGAAGAAACATGAGTGCCTCGAATGGCTGAACGATAAGGCTCCAAACTCAGTTGTTTATGTGAATTTCCGCAGCATAATGGTCATGCCCTCGGAACAACTTGTGGAATTTGGTTGGGGACTAGCAAATAGCAAGGTTTCTTTCTTCTGGGTAATTAGACCTGACTTGGTAGTTGGTAAATCAGCAATTTTGCCACCCGAGTTTGTGGGTGAAACTAAGGGAGGAAGTCTAATAGCGAGTTGGTGCCCTCAAGAGCAAGTCCTTAACCATCCATCAGTTGGAGGATTTTTGACACACAATGGTTGGAATTCGACAATGGAAAGTGCGTCTGCAGGAGTGCCTATGCGGTGTTGGCTATTCTTTGCTGTTCATCAGCAAACAAACTGTCACTGTACTTGCAAACAATGGGGCATTGATATGGAGATTGATAAAAATGTAAAGAGAGATGATGTTGAGAAGCTTGTTAGAGAGTTAATGGTGGGAGAGAAGGGTACGCGTATGAAGAATAAGGCCATGGAGTGGAAAAATTTGGCAGAGCAAGCCACTGGTCCACACGGTTCTTCATCTGCAAACTTAAGAAAAATTAGTGAATCGATTCAGTTTAAAAAGATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

209

Amino Acids

23.43

Weight (kDa)

7.64

Isoelectric Point (pI)

37.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 11 - 166 3.1e-18 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 255
AccB7I CCANNNNNTGG 2 cut(s) 290, 531
AccII CGCG 1 cut(s) 508
AciI CCGC 2 cut(s) 82, 358
AcsI RAATTY 4 cut(s) 76, 119, 319, 538
AfaI GTAC 2 cut(s) 406, 505
AfiI CCNNNNNNNGG 2 cut(s) 290, 531
AflII CTTAAG 1 cut(s) 586
AflIII ACRYGT 1 cut(s) 506
AluBI AGCT 1 cut(s) 472
AluI AGCT 1 cut(s) 472
Ama87I CYCGRG 1 cut(s) 209
AoxI GGCC 1 cut(s) 522
ApeKI GCWGC 1 cut(s) 84
ApoI RAATTY 4 cut(s) 76, 119, 319, 538
ArsI GACNNNNNNTTYG 2 cut(s) 382, 414
Asp700I GAANNNNTTC 1 cut(s) 606
AspS9I GGNCC 1 cut(s) 560
AsuHPI GGTGA 1 cut(s) 233
AvaI CYCGRG 1 cut(s) 209
AvaII GGWCC 1 cut(s) 560
BaeGI GKGCMC 1 cut(s) 260
BanI GGYRCC 1 cut(s) 255
BbvI GCAGC 1 cut(s) 96
BccI CCATC 2 cut(s) 288, 292
BfaI CTAG 2 cut(s) 134, 625
BfmI CTRYAG 1 cut(s) 342
BfrI CTTAAG 1 cut(s) 586
BglII AGATCT 1 cut(s) 621
BisI GCNGC 1 cut(s) 85
BlsI GCNGC 1 cut(s) 86
Bme18I GGWCC 1 cut(s) 560
BmeT110I CYCGRG 1 cut(s) 209
BmgT120I GGNCC 1 cut(s) 560
BmiI GGNNCC 2 cut(s) 54, 257
BpuEI CTTGAG 1 cut(s) 246
Bsa29I ATCGAT 1 cut(s) 605
BsaJI CCNNGG 2 cut(s) 102, 525
Bsc4I CCNNNNNNNGG 2 cut(s) 290, 531
Bse1I ACTGG 1 cut(s) 562
BseCI ATCGAT 1 cut(s) 605
BseDI CCNNGG 2 cut(s) 102, 525
BseGI GGATG 1 cut(s) 280
BseLI CCNNNNNNNGG 2 cut(s) 290, 531
BseMII CTCAG 1 cut(s) 75
BseNI ACTGG 1 cut(s) 562
BseSI GKGCMC 1 cut(s) 260
BseXI GCAGC 1 cut(s) 96
Bsh1236I CGCG 1 cut(s) 508
BshFI GGCC 1 cut(s) 524
BshNI GGYRCC 1 cut(s) 255
BshVI ATCGAT 1 cut(s) 605
BsiHKCI CYCGRG 1 cut(s) 209
BslFI GGGAC 1 cut(s) 144
BslI CCNNNNNNNGG 2 cut(s) 290, 531
BsmFI GGGAC 1 cut(s) 144
BsnI GGCC 1 cut(s) 524
BsoBI CYCGRG 1 cut(s) 209
Bsp1286I GDGCHC 1 cut(s) 260
Bsp143I GATC 1 cut(s) 621
Bsp19I CCATGG 1 cut(s) 525
BspACI CCGC 2 cut(s) 82, 358
BspANI GGCC 1 cut(s) 524
BspCNI CTCAG 1 cut(s) 74
BspDI ATCGAT 1 cut(s) 605
BspFNI CGCG 1 cut(s) 508
BspLI GGNNCC 2 cut(s) 54, 257
BspMAI CTGCAG 1 cut(s) 346
BspT107I GGYRCC 1 cut(s) 255
BspTI CTTAAG 1 cut(s) 586
BsrI ACTGG 1 cut(s) 562
BssECI CCNNGG 2 cut(s) 102, 525
BssMI GATC 1 cut(s) 621
BssT1I CCWWGG 1 cut(s) 525
Bst4CI ACNGT 3 cut(s) 398, 404, 569
BstAFI CTTAAG 1 cut(s) 586
BstC8I GCNNGC 1 cut(s) 552
BstDEI CTNAG 2 cut(s) 61, 228
BstDSI CCRYGG 1 cut(s) 525
BstF5I GGATG 1 cut(s) 280
BstFNI CGCG 1 cut(s) 508
BstKTI GATC 1 cut(s) 624
BstMBI GATC 1 cut(s) 621
BstMWI GCNNNNNNNGC 2 cut(s) 364, 551
BstSFI CTRYAG 1 cut(s) 342
BstSLI GKGCMC 1 cut(s) 260
BstUI CGCG 1 cut(s) 508
BstV1I GCAGC 1 cut(s) 96
BstX2I RGATCY 1 cut(s) 621
BstYI RGATCY 1 cut(s) 621
Bsu15I ATCGAT 1 cut(s) 605
BsuRI GGCC 1 cut(s) 524
BsuTUI ATCGAT 1 cut(s) 605
BtgI CCRYGG 1 cut(s) 525
BtsCI GGATG 1 cut(s) 280
BtsIMutI CAGTG 2 cut(s) 400, 555
Cac8I GCNNGC 1 cut(s) 552
Cfr13I GGNCC 1 cut(s) 560
ClaI ATCGAT 1 cut(s) 605
CseI GACGC 1 cut(s) 327
Csp6I GTAC 2 cut(s) 405, 504
CviAII CATG 3 cut(s) 23, 97, 526
CviJI RGCY 6 cut(s) 40, 53, 367, 472, 524, 554
CviKI_1 RGCY 6 cut(s) 40, 53, 367, 472, 524, 554
CviQI GTAC 2 cut(s) 405, 504
DdeI CTNAG 2 cut(s) 61, 228
DpnI GATC 1 cut(s) 623
DpnII GATC 1 cut(s) 621
DraI TTTAAA 1 cut(s) 616
Eco130I CCWWGG 1 cut(s) 525
Eco47I GGWCC 1 cut(s) 560
Eco88I CYCGRG 1 cut(s) 209
EcoRI GAATTC 1 cut(s) 319
EcoT14I CCWWGG 1 cut(s) 525
ErhI CCWWGG 1 cut(s) 525
FaeI CATG 3 cut(s) 26, 100, 529
FaiI YATR 8 cut(s) 24, 72, 89, 98, 356, 431, 512, 527
FaqI GGGAC 1 cut(s) 144
FatI CATG 3 cut(s) 22, 96, 525
Fnu4HI GCNGC 1 cut(s) 85
FokI GGATG 1 cut(s) 267
Fsp4HI GCNGC 1 cut(s) 85
FspBI CTAG 2 cut(s) 134, 625
GluI GCNGC 1 cut(s) 85
HaeIII GGCC 1 cut(s) 524
HgaI GACGC 1 cut(s) 327
Hin1II CATG 3 cut(s) 26, 100, 529
HindIII AAGCTT 1 cut(s) 470
HinfI GANTC 2 cut(s) 602, 607
HphI GGTGA 1 cut(s) 233
Hpy166II GTNNAC 1 cut(s) 563
Hpy188I TCNGA 1 cut(s) 106
Hpy188III TCNNGA 1 cut(s) 263
Hpy8I GTNNAC 1 cut(s) 563
HpyAV CCTTC 1 cut(s) 493
HpyCH4III ACNGT 3 cut(s) 398, 404, 569
HpyCH4V TGCA 3 cut(s) 344, 411, 581
HpyF10VI GCNNNNNNNGC 2 cut(s) 364, 551
HpyF3I CTNAG 2 cut(s) 61, 228
Hsp92II CATG 3 cut(s) 26, 100, 529
Kzo9I GATC 1 cut(s) 621
LmnI GCTCC 1 cut(s) 58
LpnPI CCDG 4 cut(s) 145, 186, 330, 543
Lsp1109I GCAGC 1 cut(s) 96
MaeI CTAG 2 cut(s) 134, 625
MaeIII GTNAC 1 cut(s) 398
MalI GATC 1 cut(s) 623
MboI GATC 1 cut(s) 621
MboII GAAGA 4 cut(s) 28, 148, 526, 564
MflI RGATCY 1 cut(s) 621
MhlI GDGCHC 1 cut(s) 260
MluCI AATT 7 cut(s) 76, 119, 165, 198, 319, 538, 594
MluI ACGCGT 1 cut(s) 506
MmeI TCCRAC 2 cut(s) 271, 296
MnlI CCTC 5 cut(s) 41, 112, 227, 270, 287
MroXI GAANNNNTTC 1 cut(s) 606
MseI TTAA 4 cut(s) 276, 485, 587, 615
MslI CAYNNNNRTG 1 cut(s) 428
MspCI CTTAAG 1 cut(s) 586
MvnI CGCG 1 cut(s) 508
MwoI GCNNNNNNNGC 2 cut(s) 364, 551
NcoI CCATGG 1 cut(s) 525
NdeII GATC 1 cut(s) 621
NlaIII CATG 3 cut(s) 26, 100, 529
NlaIV GGNNCC 2 cut(s) 54, 257
NmuCI GTSAC 1 cut(s) 398
PdmI GAANNNNTTC 1 cut(s) 606
PfeI GAWTC 2 cut(s) 602, 607
PflMI CCANNNNNTGG 2 cut(s) 290, 531
PkrI GCNGC 1 cut(s) 86
PspN4I GGNNCC 2 cut(s) 54, 257
PspPI GGNCC 1 cut(s) 560
PstI CTGCAG 1 cut(s) 346
PsuI RGATCY 1 cut(s) 621
RsaI GTAC 2 cut(s) 406, 505
RsaNI GTAC 2 cut(s) 405, 504
RseI CAYNNNNRTG 1 cut(s) 428
SaqAI TTAA 4 cut(s) 276, 485, 587, 615
SatI GCNGC 1 cut(s) 85
Sau3AI GATC 1 cut(s) 621
Sau96I GGNCC 1 cut(s) 560
SduI GDGCHC 1 cut(s) 260
SetI ASST 3 cut(s) 150, 175, 474
SfcI CTRYAG 1 cut(s) 342
SinI GGWCC 1 cut(s) 560
SmiMI CAYNNNNRTG 1 cut(s) 428
SmlI CTYRAG 2 cut(s) 261, 586
SmoI CTYRAG 2 cut(s) 261, 586
Sse9I AATT 7 cut(s) 76, 119, 165, 198, 319, 538, 594
SsiI CCGC 2 cut(s) 82, 358
SspMI CTAG 2 cut(s) 134, 625
StyI CCWWGG 1 cut(s) 525
TaaI ACNGT 3 cut(s) 398, 404, 569
TaqI TCGA 3 cut(s) 33, 323, 605
TasI AATT 7 cut(s) 76, 119, 165, 198, 319, 538, 594
TatI WGTACW 1 cut(s) 404
TfiI GAWTC 2 cut(s) 602, 607
Tru1I TTAA 4 cut(s) 276, 485, 587, 615
Tru9I TTAA 4 cut(s) 276, 485, 587, 615
TscAI CASTG 2 cut(s) 407, 562
TseFI GTSAC 1 cut(s) 398
TseI GCWGC 1 cut(s) 84
Tsp45I GTSAC 1 cut(s) 398
TspDTI ATGAA 3 cut(s) 371, 527, 564
TspRI CASTG 2 cut(s) 407, 562
Van91I CCANNNNNTGG 2 cut(s) 290, 531
Vha464I CTTAAG 1 cut(s) 586
VpaK11BI GGWCC 1 cut(s) 560
XapI RAATTY 4 cut(s) 76, 119, 319, 538
XcmI CCANNNNNNNNNTGG 1 cut(s) 287
XmnI GAANNNNTTC 1 cut(s) 606
XspI CTAG 2 cut(s) 134, 625
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.