Rorug02G0443500

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000097
Physical Location & Seq
Reverse (-)
56969595 .. 56978205
8611 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0443500.1

Sequence Viewer

Length: 2217 bp
ATGGCTGCAGCTGCCGGGCTCAATCTTCACCGCCCGTACCTCCTCCTCTCCATAATCTTCCTCTCCCTTCCTCCATTAACATATTCGATAACCGAAGCCGAAGCGTTGCTCAAGTTCAAGCAATCCCTCACCAATGCAAACGCTTTGGATTCTTGGGTCCCTAACTCTGCACCATGCACCAAAGATGCGCAATGGGCCGGACTCGTATGCTTTAATGGGATCGTTACGGGTCTTCGTCTCGGGGGAATGGCGTTATCTGGTAACCTAGACTTTGAATCGCTGTATGAAGTCAAGGGTCTTCGAACCATGAGCTTGGTGGACAACAATTTCTCCGGCTCCATCCCTAATTTCAACGTCATTGGCCCCTTGAAAGCTATCTATTTGTCCAGGAATGGGTTTTCCGGCGAGATCCCATCGGACTTTTTCACCAACATGGACTCATTGAAGAAAGTGTGGCTGGACCACAATCAATTCAGCGGGAAAATTCCGGTTTCTCTGGCGGAAAGTCCCAATCTGCAGGTACTGCATCTCGAGAACAATCAGTTCAGCGGGAGCCTCCCGGAAATGAACCAGAAGTCATTGAACACCCTCAATGTGTCTAACAACAAGCTGGAGGGGGAGATTCCGAAGAGTTTGGCTAAATTTGATGAGGCTATGTTTTCTGGAAACTCAGGTCTTTGTGGGCAAAAGGTGGGCAAAGAATGCAAAAATGTAGCAGGGGAGCCGACACCATCACCCTCACCTTCACCAACGAGTTCTAATGAGAGCAATGAGGGTAGTGGCTCGAAATCGAGTTCGAAAAGTAAGGGGGGAAGCTCTACAATTGTTATTGCATTGTCAGTAACTTGCGCGGTGGTGCTTCTCATTCTTATCCTTCTGTTGTTTGTCAGATCAAGGAGGAAGAAGGCAGATGAGAATTTCGATACGCTTGGAACCCAAAATAGTCAAAGCACTGATCATTCTCCTCCTCAAGAAAGAAACGTAGAAGCAGTTGAGTTGAATGTGGCGGAGATAAATAACAAGGAAAGGGAAGTGGTAGTTGAGCCATCTCCATCAGTTGGTAGTGCTAAAAAGGGTGGCTCGGAGCGCAAGAGTACTTCCAGTCATGCTAGAGGAGGCTGCGGGATGGGCGATCTAGTGATGTTGAGTGAAGAGAAGGGAGTGTTTGGGTTGACGGATTTGATGAAGGCCGCGGCAGAGGTGCTTGGAAATGGGGGGATGGGTTCGTCGTACAAGGCTGTCATGGCGAATGGGTTGGCGGTTGTGGTGAAACGGATAAGAGAAATGAATGCAATGGGGAGAGAGGGCTTTGATGCAGAGATGAGGAGGTATGGGACGCTACGTCATTGGAATGTCTTGACTCCTTTGGCTTATCACTACAGAAAAGAAGAGAAGCTGTTAATCTACGAGTACATCCCCAAGAGCAGCTTGCTTTATCTGTTACATGGTGATCGTGGACCGTCTCACGACCAACTTAACTGGCATGCTAGGTTAAAGATTATTCAAGGCACGGCAAGAGGGATGGGTTTTATCCATACTGAATTTTCAGCCTATGATTTGCCCCATGGGGACCTAAAGTCCAGCAATGTACTAATTGGCCCCGACTATGAGCCATTGCTTTCAGACTTTGCATTTGCTCCAATGATCAACTCTTCACATTTGCCACAAGCCTTGTTTGCATACAAAGCCCCAGAAGCTTTAGAATTTGGCCAAGTATCACCCAAGTGCGATGTGTTTTGTCTAGGAGTCCTCATTCTCGAAACCCTAACGGGCAAATTCCCTTCTCAGTATCTCAACAATGGCAAAGGTGGGATTGATGTAGTCCAATGGGTGCGGTCGGCTATATCTGAAAGGAGAGAATTGGAACTATTAGACCCTGAGATTTCAAACGAAAAGGGTTCAATCAGTGAAATGGAGAAGCTCCTCCACATTGGTGCAGCCTGCACGGAGAATGATCCAAGGCAACGGTTAGATATGTTGGAGGCTATTCGAAGGATAGAGCAGATAAAGGCCATCGAAACTAGTGAAGACGCTGCTAGAACAATACAAGTGCTACCGTCACTTAGAGACGGTTGTGCAGACTCTTCTTTAGTAATGCCAAAGACAACTCATGCACCGACATTGCGGGAAGGGGTAGCAGATATCCACGCACCTGCAGCTGCTGAGACCGAGATTAGCAGACTGCCATCAAAGAGCTTCCGAAGCAAATCGGGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

738

Amino Acids

80.16

Weight (kDa)

6.29

Isoelectric Point (pI)

42.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 70 3.4e-07 Leucine rich repeat N-terminal domain
LRR_8 PF13855 123 - 182 7.7e-07 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 399 - 608 8.3e-21 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 400 - 663 4.8e-25 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2161
Acc16I TGCGCA 1 cut(s) 189
Acc36I ACCTGC 2 cut(s) 508, 2161
AccB7I CCANNNNNTGG 1 cut(s) 1058
AccII CGCG 2 cut(s) 851, 1193
AclWI GGATC 3 cut(s) 227, 403, 1949
AcoI YGGCCR 1 cut(s) 1708
AcsI RAATTY 6 cut(s) 483, 641, 916, 1541, 1703, 1775
AfaI GTAC 6 cut(s) 38, 522, 1096, 1232, 1412, 1590
AfiI CCNNNNNNNGG 2 cut(s) 393, 1058
AhdI GACNNNNNGTC 2 cut(s) 1341, 1576
AhlI ACTAGT 1 cut(s) 2021
AjnI CCWGG 1 cut(s) 386
AleI CACNNNNGTG 2 cut(s) 1723, 1932
Alw26I GTCTC 4 cut(s) 242, 1467, 2061, 2159
AlwI GGATC 3 cut(s) 227, 403, 1949
AlwNI CAGNNNCTG 2 cut(s) 523, 2162
Ama87I CYCGRG 2 cut(s) 239, 530
AoxI GGCC 6 cut(s) 195, 361, 1188, 1597, 1708, 2010
ApeKI GCWGC 9 cut(s) 5, 8, 11, 1119, 1425, 1937, 2033, 2156, 2159
ApoI RAATTY 6 cut(s) 483, 641, 916, 1541, 1703, 1775
ArsI GACNNNNNNTTYG 2 cut(s) 1616, 1648
AspLEI GCGC 3 cut(s) 190, 851, 1089
AspS9I GGNCC 7 cut(s) 157, 195, 362, 460, 1457, 1570, 1598
AsuC2I CCSGG 2 cut(s) 16, 560
AsuHPI GGTGA 9 cut(s) 20, 121, 418, 726, 732, 738, 1279, 1460, 1710
AsuII TTCGAA 3 cut(s) 301, 797, 1990
AvaI CYCGRG 2 cut(s) 239, 530
AvaII GGWCC 4 cut(s) 157, 460, 1457, 1570
BalI TGGCCA 1 cut(s) 1710
BanII GRGCYC 1 cut(s) 21
BbsI GAAGAC 3 cut(s) 224, 290, 2034
BbvI GCAGC 7 cut(s) 20, 1106, 1437, 1949, 2020, 2146, 2168
BceAI ACGGC 1 cut(s) 1527
BciT130I CCWGG 1 cut(s) 388
BclI TGATCA 2 cut(s) 955, 1644
BcnI CCSGG 2 cut(s) 16, 560
BcoDI GTCTC 4 cut(s) 242, 1467, 2061, 2159
BcuI ACTAGT 1 cut(s) 2021
BfaI CTAG 7 cut(s) 266, 1110, 1136, 1488, 1742, 2022, 2037
BfmI CTRYAG 4 cut(s) 6, 515, 1378, 2154
BfuAI ACCTGC 2 cut(s) 508, 2161
BmcAI AGTACT 1 cut(s) 1096
Bme1390I CCNGG 3 cut(s) 16, 388, 560
Bme18I GGWCC 4 cut(s) 157, 460, 1457, 1570
BmeRI GACNNNNNGTC 2 cut(s) 1341, 1576
BmeT110I CYCGRG 2 cut(s) 239, 530
BmgT120I GGNCC 7 cut(s) 157, 195, 362, 460, 1457, 1570, 1598
BmiI GGNNCC 9 cut(s) 158, 159, 337, 364, 554, 723, 934, 1571, 1600
BmrFI CCNGG 3 cut(s) 16, 388, 560
BmsI GCATC 3 cut(s) 175, 535, 1303
BpiI GAAGAC 3 cut(s) 224, 290, 2034
BpmI CTGGAG 1 cut(s) 632
Bpu14I TTCGAA 3 cut(s) 301, 797, 1990
BpuEI CTTGAG 2 cut(s) 95, 954
BpuMI CCSGG 2 cut(s) 16, 560
BsaI GGTCTC 1 cut(s) 2159
BsaJI CCNNGG 3 cut(s) 1191, 1564, 1958
BsaWI WCCGGW 1 cut(s) 487
BsaXI ACNNNNNCTCC 2 cut(s) 314, 344
Bsc4I CCNNNNNNNGG 2 cut(s) 393, 1058
Bse1I ACTGG 2 cut(s) 1101, 1484
Bse3DI GCAATG 6 cut(s) 197, 775, 1299, 1591, 1613, 2120
BseBI CCWGG 1 cut(s) 388
BseDI CCNNGG 3 cut(s) 1191, 1564, 1958
BseGI GGATG 5 cut(s) 339, 1131, 1224, 1413, 1527
BseLI CCNNNNNNNGG 2 cut(s) 393, 1058
BseMI GCAATG 6 cut(s) 197, 775, 1299, 1591, 1613, 2120
BseMII CTCAG 4 cut(s) 684, 1799, 1869, 2154
BseNI ACTGG 2 cut(s) 1101, 1484
BseRI GAGGAG 7 cut(s) 32, 35, 954, 957, 1128, 1339, 1913
BseXI GCAGC 7 cut(s) 20, 1106, 1437, 1949, 2020, 2146, 2168
BsgI GTGCAG 4 cut(s) 153, 1927, 1956, 2097
Bsh1236I CGCG 2 cut(s) 851, 1193
Bsh1285I CGRYCG 1 cut(s) 1838
BshFI GGCC 6 cut(s) 197, 363, 1190, 1599, 1710, 2012
BsiEI CGRYCG 1 cut(s) 1838
BsiHKCI CYCGRG 2 cut(s) 239, 530
BsiSI CCGG 6 cut(s) 15, 198, 333, 402, 488, 560
BslFI GGGAC 4 cut(s) 143, 492, 1348, 1583
BslI CCNNNNNNNGG 2 cut(s) 393, 1058
BsmAI GTCTC 4 cut(s) 242, 1467, 2061, 2159
BsmBI CGTCTC 3 cut(s) 242, 1467, 2061
BsmFI GGGAC 4 cut(s) 143, 492, 1348, 1583
BsmI GAATGC 2 cut(s) 707, 1294
BsnI GGCC 6 cut(s) 197, 363, 1190, 1599, 1710, 2012
Bso31I GGTCTC 1 cut(s) 2159
BsoBI CYCGRG 2 cut(s) 239, 530
Bsp119I TTCGAA 3 cut(s) 301, 797, 1990
Bsp1286I GDGCHC 1 cut(s) 21
Bsp143I GATC 8 cut(s) 219, 408, 890, 955, 1132, 1450, 1644, 1954
Bsp19I CCATGG 1 cut(s) 1564
BspANI GGCC 6 cut(s) 197, 363, 1190, 1599, 1710, 2012
BspCNI CTCAG 4 cut(s) 683, 1798, 1870, 2155
BspFNI CGCG 2 cut(s) 851, 1193
BspLI GGNNCC 9 cut(s) 158, 159, 337, 364, 554, 723, 934, 1571, 1600
BspMAI CTGCAG 3 cut(s) 10, 519, 2158
BspMI ACCTGC 2 cut(s) 508, 2161
BspPI GGATC 3 cut(s) 227, 403, 1949
BspT104I TTCGAA 3 cut(s) 301, 797, 1990
BspTNI GGTCTC 1 cut(s) 2159
BsrDI GCAATG 6 cut(s) 197, 775, 1299, 1591, 1613, 2120
BsrI ACTGG 2 cut(s) 1101, 1484
BssECI CCNNGG 3 cut(s) 1191, 1564, 1958
BssMI GATC 8 cut(s) 219, 408, 890, 955, 1132, 1450, 1644, 1954
BssT1I CCWWGG 2 cut(s) 1564, 1958
Bst2UI CCWGG 1 cut(s) 388
Bst4CI ACNGT 4 cut(s) 1461, 1968, 2058, 2072
Bst6I CTCTTC 5 cut(s) 623, 1146, 1383, 1657, 2089
BstAPI GCANNNNNTGC 2 cut(s) 523, 702
BstBI TTCGAA 3 cut(s) 301, 797, 1990
BstC8I GCNNGC 3 cut(s) 1430, 1485, 1942
BstDEI CTNAG 5 cut(s) 670, 1785, 1878, 2063, 2163
BstDSI CCRYGG 2 cut(s) 1191, 1564
BstEII GGTNACC 1 cut(s) 260
BstF5I GGATG 5 cut(s) 339, 1131, 1224, 1413, 1527
BstFNI CGCG 2 cut(s) 851, 1193
BstHHI GCGC 3 cut(s) 190, 851, 1089
BstKTI GATC 8 cut(s) 222, 411, 893, 958, 1135, 1453, 1647, 1957
BstMAI GTCTC 4 cut(s) 242, 1467, 2061, 2159
BstMBI GATC 8 cut(s) 219, 408, 890, 955, 1132, 1450, 1644, 1954
BstMCI CGRYCG 1 cut(s) 1838
BstNI CCWGG 1 cut(s) 388
BstNSI RCATGY 1 cut(s) 1487
BstPI GGTNACC 1 cut(s) 260
BstSCI CCNGG 3 cut(s) 14, 386, 558
BstSFI CTRYAG 4 cut(s) 6, 515, 1378, 2154
BstUI CGCG 2 cut(s) 851, 1193
BstV1I GCAGC 7 cut(s) 20, 1106, 1437, 1949, 2020, 2146, 2168
BstV2I GAAGAC 3 cut(s) 224, 290, 2034
BstX2I RGATCY 1 cut(s) 408
BstXI CCANNNNNNTGG 1 cut(s) 313
BstYI RGATCY 1 cut(s) 408
BsuRI GGCC 6 cut(s) 197, 363, 1190, 1599, 1710, 2012
BtgI CCRYGG 2 cut(s) 1191, 1564
BtgZI GCGATG 1 cut(s) 1743
BtsCI GGATG 5 cut(s) 339, 1131, 1224, 1413, 1527
BtsIMutI CAGTG 2 cut(s) 951, 1912
BveI ACCTGC 2 cut(s) 508, 2161
Cac8I GCNNGC 3 cut(s) 1430, 1485, 1942
CaiI CAGNNNCTG 2 cut(s) 523, 2162
CfoI GCGC 3 cut(s) 190, 851, 1089
Cfr13I GGNCC 7 cut(s) 157, 195, 362, 460, 1457, 1570, 1598
Cfr42I CCGCGG 1 cut(s) 1194
CseI GACGC 2 cut(s) 1345, 2039
Csp6I GTAC 6 cut(s) 37, 521, 1095, 1231, 1411, 1589
CspCI CAANNNNNGTGG 2 cut(s) 1653, 1688
CviAII CATG 9 cut(s) 174, 307, 433, 1106, 1243, 1445, 1484, 1565, 2111
CviQI GTAC 6 cut(s) 37, 521, 1095, 1231, 1411, 1589
DdeI CTNAG 5 cut(s) 670, 1785, 1878, 2063, 2163
DpnI GATC 8 cut(s) 221, 410, 892, 957, 1134, 1452, 1646, 1956
DpnII GATC 8 cut(s) 219, 408, 890, 955, 1132, 1450, 1644, 1954
DriI GACNNNNNGTC 2 cut(s) 1341, 1576
EaeI YGGCCR 1 cut(s) 1708
Eam1104I CTCTTC 5 cut(s) 623, 1146, 1383, 1657, 2089
Eam1105I GACNNNNNGTC 2 cut(s) 1341, 1576
EarI CTCTTC 5 cut(s) 623, 1146, 1383, 1657, 2089
EciI GGCGGA 2 cut(s) 515, 1022
Eco130I CCWWGG 2 cut(s) 1564, 1958
Eco24I GRGCYC 1 cut(s) 21
Eco31I GGTCTC 1 cut(s) 2159
Eco32I GATATC 1 cut(s) 2143
Eco47I GGWCC 4 cut(s) 157, 460, 1457, 1570
Eco88I CYCGRG 2 cut(s) 239, 530
Eco91I GGTNACC 1 cut(s) 260
EcoO109I RGGNCCY 2 cut(s) 157, 1570
EcoO65I GGTNACC 1 cut(s) 260
EcoRII CCWGG 1 cut(s) 386
EcoRV GATATC 1 cut(s) 2143
EcoT14I CCWWGG 2 cut(s) 1564, 1958
EcoT38I GRGCYC 1 cut(s) 21
ErhI CCWWGG 2 cut(s) 1564, 1958
Esp3I CGTCTC 3 cut(s) 242, 1467, 2061
FaeI CATG 9 cut(s) 177, 310, 436, 1109, 1246, 1448, 1487, 1568, 2114
FalI AAGNNNNNCTT 2 cut(s) 1412, 1444
FaqI GGGAC 4 cut(s) 143, 492, 1348, 1583
FatI CATG 9 cut(s) 173, 306, 432, 1105, 1242, 1444, 1483, 1564, 2110
FauI CCCGC 4 cut(s) 470, 542, 1115, 2118
FbaI TGATCA 2 cut(s) 955, 1644
FokI GGATG 5 cut(s) 326, 1138, 1231, 1400, 1534
FriOI GRGCYC 1 cut(s) 21
FspBI CTAG 7 cut(s) 266, 1110, 1136, 1488, 1742, 2022, 2037
FspI TGCGCA 1 cut(s) 189
GlaI GCGC 3 cut(s) 189, 850, 1088
GsuI CTGGAG 1 cut(s) 632
HaeIII GGCC 6 cut(s) 197, 363, 1190, 1599, 1710, 2012
HapII CCGG 6 cut(s) 15, 198, 333, 402, 488, 560
HgaI GACGC 2 cut(s) 1345, 2039
HhaI GCGC 3 cut(s) 190, 851, 1089
Hin1II CATG 9 cut(s) 177, 310, 436, 1109, 1246, 1448, 1487, 1568, 2114
Hin6I GCGC 3 cut(s) 188, 849, 1087
HinP1I GCGC 3 cut(s) 188, 849, 1087
HincII GTYRAC 1 cut(s) 1173
HindII GTYRAC 1 cut(s) 1173
HindIII AAGCTT 1 cut(s) 1695
HinfI GANTC 8 cut(s) 149, 201, 275, 437, 622, 1360, 1746, 2081
HpaII CCGG 6 cut(s) 15, 198, 333, 402, 488, 560
HphI GGTGA 9 cut(s) 20, 121, 418, 726, 732, 738, 1279, 1460, 1710
Hpy166II GTNNAC 3 cut(s) 319, 1173, 1457
Hpy188I TCNGA 7 cut(s) 418, 627, 890, 1084, 1624, 1849, 2201
Hpy188III TCNNGA 7 cut(s) 530, 532, 663, 971, 1357, 1466, 1757
Hpy8I GTNNAC 3 cut(s) 319, 1173, 1457
Hpy99I CGWCG 1 cut(s) 1231
HpyAV CCTTC 9 cut(s) 77, 753, 884, 898, 1150, 1180, 1791, 1986, 2123
HpyCH4III ACNGT 4 cut(s) 1461, 1968, 2058, 2072
HpyCH4IV ACGT 3 cut(s) 354, 981, 1342
HpyF3I CTNAG 5 cut(s) 670, 1785, 1878, 2063, 2163
HpySE526I ACGT 3 cut(s) 354, 981, 1342
Hsp92II CATG 9 cut(s) 177, 310, 436, 1109, 1246, 1448, 1487, 1568, 2114
HspAI GCGC 3 cut(s) 188, 849, 1087
KflI GGGWCCC 1 cut(s) 157
Ksp22I TGATCA 2 cut(s) 955, 1644
KspI CCGCGG 1 cut(s) 1194
Kzo9I GATC 8 cut(s) 219, 408, 890, 955, 1132, 1450, 1644, 1954
LmnI GCTCC 6 cut(s) 341, 552, 721, 1084, 1642, 1926
Lsp1109I GCAGC 7 cut(s) 20, 1106, 1437, 1949, 2020, 2146, 2168
LweI GCATC 3 cut(s) 175, 535, 1303
MaeI CTAG 7 cut(s) 266, 1110, 1136, 1488, 1742, 2022, 2037
MaeII ACGT 3 cut(s) 354, 981, 1342
MaeIII GTNAC 5 cut(s) 223, 260, 841, 1440, 2058
MalI GATC 8 cut(s) 221, 410, 892, 957, 1134, 1452, 1646, 1956
MboI GATC 8 cut(s) 219, 408, 890, 955, 1132, 1450, 1644, 1954
MfeI CAATTG 1 cut(s) 822
MflI RGATCY 1 cut(s) 408
MhlI GDGCHC 1 cut(s) 21
MlsI TGGCCA 1 cut(s) 1710
MluNI TGGCCA 1 cut(s) 1710
MlyI GAGTC 5 cut(s) 195, 431, 1354, 1755, 2075
MmeI TCCRAC 1 cut(s) 1959
Mox20I TGGCCA 1 cut(s) 1710
MscI TGGCCA 1 cut(s) 1710
MseI TTAA 5 cut(s) 77, 213, 1400, 1476, 1493
MslI CAYNNNNRTG 4 cut(s) 431, 1350, 1723, 1932
Msp20I TGGCCA 1 cut(s) 1710
MspA1I CMGCKG 5 cut(s) 11, 477, 549, 1193, 2159
MspI CCGG 6 cut(s) 15, 198, 333, 402, 488, 560
MspR9I CCNGG 3 cut(s) 16, 388, 560
MunI CAATTG 1 cut(s) 822
Mva1269I GAATGC 2 cut(s) 707, 1294
MvaI CCWGG 1 cut(s) 388
MvnI CGCG 2 cut(s) 851, 1193
NciI CCSGG 2 cut(s) 16, 560
NcoI CCATGG 1 cut(s) 1564
NdeII GATC 8 cut(s) 219, 408, 890, 955, 1132, 1450, 1644, 1954
NlaIII CATG 9 cut(s) 177, 310, 436, 1109, 1246, 1448, 1487, 1568, 2114
NlaIV GGNNCC 9 cut(s) 158, 159, 337, 364, 554, 723, 934, 1571, 1600
NmuCI GTSAC 1 cut(s) 2058
NsbI TGCGCA 1 cut(s) 189
NspI RCATGY 1 cut(s) 1487
NspV TTCGAA 3 cut(s) 301, 797, 1990
OliI CACNNNNGTG 2 cut(s) 1723, 1932
PaeI GCATGC 1 cut(s) 1487
PaeR7I CTCGAG 1 cut(s) 530
PaqCI CACCTGC 1 cut(s) 2161
PctI GAATGC 2 cut(s) 707, 1294
PfeI GAWTC 3 cut(s) 149, 275, 622
PflMI CCANNNNNTGG 1 cut(s) 1058
PfoI TCCNGGA 2 cut(s) 386, 558
PleI GAGTC 5 cut(s) 195, 431, 1354, 1754, 2075
PpsI GAGTC 5 cut(s) 195, 431, 1354, 1754, 2075
PpuMI RGGWCCY 2 cut(s) 157, 1570
Psp5II RGGWCCY 2 cut(s) 157, 1570
Psp6I CCWGG 1 cut(s) 386
PspEI GGTNACC 1 cut(s) 260
PspGI CCWGG 1 cut(s) 386
PspN4I GGNNCC 9 cut(s) 158, 159, 337, 364, 554, 723, 934, 1571, 1600
PspPI GGNCC 7 cut(s) 157, 195, 362, 460, 1457, 1570, 1598
PspPPI RGGWCCY 2 cut(s) 157, 1570
PstI CTGCAG 3 cut(s) 10, 519, 2158
PstNI CAGNNNCTG 2 cut(s) 523, 2162
PsuI RGATCY 1 cut(s) 408
PvuII CAGCTG 2 cut(s) 11, 2159
RsaI GTAC 6 cut(s) 38, 522, 1096, 1232, 1412, 1590
RsaNI GTAC 6 cut(s) 37, 521, 1095, 1231, 1411, 1589
RseI CAYNNNNRTG 4 cut(s) 431, 1350, 1723, 1932
SacII CCGCGG 1 cut(s) 1194
SaqAI TTAA 5 cut(s) 77, 213, 1400, 1476, 1493
Sau3AI GATC 8 cut(s) 219, 408, 890, 955, 1132, 1450, 1644, 1954
Sau96I GGNCC 7 cut(s) 157, 195, 362, 460, 1457, 1570, 1598
ScaI AGTACT 1 cut(s) 1096
SchI GAGTC 5 cut(s) 195, 431, 1354, 1755, 2075
ScrFI CCNGG 3 cut(s) 16, 388, 560
SduI GDGCHC 1 cut(s) 21
SfaNI GCATC 3 cut(s) 175, 535, 1303
SfcI CTRYAG 4 cut(s) 6, 515, 1378, 2154
Sfr274I CTCGAG 1 cut(s) 530
Sfr303I CCGCGG 1 cut(s) 1194
SfuI TTCGAA 3 cut(s) 301, 797, 1990
SgrBI CCGCGG 1 cut(s) 1194
SinI GGWCC 4 cut(s) 157, 460, 1457, 1570
SlaI CTCGAG 1 cut(s) 530
SmiMI CAYNNNNRTG 4 cut(s) 431, 1350, 1723, 1932
SmlI CTYRAG 3 cut(s) 110, 530, 969
SmoI CTYRAG 3 cut(s) 110, 530, 969
SpeI ACTAGT 1 cut(s) 2021
SphI GCATGC 1 cut(s) 1487
SspMI CTAG 7 cut(s) 266, 1110, 1136, 1488, 1742, 2022, 2037
StyD4I CCNGG 3 cut(s) 14, 386, 558
StyI CCWWGG 2 cut(s) 1564, 1958
TaaI ACNGT 4 cut(s) 1461, 1968, 2058, 2072
TaiI ACGT 3 cut(s) 357, 984, 1345
TaqII GACCGA 1 cut(s) 2183
TatI WGTACW 3 cut(s) 1094, 1410, 1588
TauI GCSGC 2 cut(s) 1193, 1196
TfiI GAWTC 3 cut(s) 149, 275, 622
Tru1I TTAA 5 cut(s) 77, 213, 1400, 1476, 1493
Tru9I TTAA 5 cut(s) 77, 213, 1400, 1476, 1493
TscAI CASTG 2 cut(s) 958, 1912
TseFI GTSAC 1 cut(s) 2058
TseI GCWGC 9 cut(s) 5, 8, 11, 1119, 1425, 1937, 2033, 2156, 2159
Tsp45I GTSAC 1 cut(s) 2058
TspDTI ATGAA 4 cut(s) 300, 581, 1199, 1301
TspGWI ACGGA 3 cut(s) 1190, 1288, 1961
TspRI CASTG 2 cut(s) 958, 1912
Van91I CCANNNNNTGG 1 cut(s) 1058
VpaK11BI GGWCC 4 cut(s) 157, 460, 1457, 1570
XapI RAATTY 6 cut(s) 483, 641, 916, 1541, 1703, 1775
XceI RCATGY 1 cut(s) 1487
XcmI CCANNNNNNNNNTGG 1 cut(s) 313
XhoI CTCGAG 1 cut(s) 530
XspI CTAG 7 cut(s) 266, 1110, 1136, 1488, 1742, 2022, 2037
ZrmI AGTACT 1 cut(s) 1096
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.