Rmu_sc0000857.1_g000028

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000857.1
Physical Location & Seq
Forward (+)
136783 .. 137544
762 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000857.1_g000028.1.cds

Sequence Viewer

Length: 762 bp
atgagatttactcgccaactttcaaactacggaccccgacgacatcctgttaatttcaccatggaatcaatgcatagagctgataaggcttcggcaataattcttcatacttttgatgctttggagcctcatgttctggaggctctctcatctatgcttaagctcccacctgtttatgcaattgggcctcaacaattacacctcaatcaattaccagaagaccctttaaaggatatgggatacaatctatggaaagaagaaaccgagtgtctcgaatggctcgattctaaggagcataactcagttgtttatgtcagttttggcagtatagcggtaatgtctccacaacatcttgtagagtttggttggggacttgtaaatagtaaagttccattcttcttggtcattaggcctgatttggttgttggtgagtccgcgattttgccaccggagtttgtagctgaaactaaggaaagaggtctaatcgcaagttggtgtccgcaagagcaagtacgtaaccacccatcagttggagggtttttgacacacagcggttggaattctactgttgagagtttgtgtgcaggtgtgcctatgctgtgttggccattcttttctaaccagctaacaaattgttggtatgcttgtaatgaatggggcattggcatggagattagtaatgatgtaaagacaggcgaagttgagaagcttgttagagagttaatggggggagagaagcactacaaaaagaaattgcaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

253

Amino Acids

28.71

Weight (kDa)

5.8

Isoelectric Point (pI)

50.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 575
Acc36I ACCTGC 1 cut(s) 575
AccB7I CCANNNNNTGG 1 cut(s) 530
AccII CGCG 1 cut(s) 437
AciI CCGC 4 cut(s) 332, 435, 500, 552
AcoI YGGCCR 1 cut(s) 605
AcsI RAATTY 1 cut(s) 559
AfaI GTAC 1 cut(s) 513
AfiI CCNNNNNNNGG 2 cut(s) 229, 530
AflII CTTAAG 1 cut(s) 158
AgsI TTSAA 1 cut(s) 24
AjuI GAANNNNNNNTTGG 2 cut(s) 645, 677
AluBI AGCT 5 cut(s) 80, 163, 461, 625, 709
AluI AGCT 5 cut(s) 80, 163, 461, 625, 709
Alw26I GTCTC 2 cut(s) 275, 345
AoxI GGCC 3 cut(s) 185, 410, 605
ApoI RAATTY 1 cut(s) 559
AspS9I GGNCC 2 cut(s) 32, 185
AsuHPI GGTGA 2 cut(s) 49, 440
AvaII GGWCC 1 cut(s) 32
BalI TGGCCA 1 cut(s) 607
BbsI GAAGAC 1 cut(s) 225
BccI CCATC 1 cut(s) 532
BciVI GTATCC 1 cut(s) 233
BcoDI GTCTC 2 cut(s) 275, 345
BfrI CTTAAG 1 cut(s) 158
BfuAI ACCTGC 1 cut(s) 575
BfuI GTATCC 1 cut(s) 233
Bme18I GGWCC 1 cut(s) 32
BmgT120I GGNCC 2 cut(s) 32, 185
BmiI GGNNCC 2 cut(s) 34, 126
BmsI GCATC 1 cut(s) 106
BpiI GAAGAC 1 cut(s) 225
BplI GAGNNNNNCTC 5 cut(s) 27, 131, 163, 284, 316
BpmI CTGGAG 1 cut(s) 158
BsaAI YACGTR 1 cut(s) 515
BsaJI CCNNGG 1 cut(s) 60
BsaWI WCCGGW 1 cut(s) 448
Bsc4I CCNNNNNNNGG 2 cut(s) 229, 530
BseDI CCNNGG 1 cut(s) 60
BseGI GGATG 1 cut(s) 43
BseLI CCNNNNNNNGG 2 cut(s) 229, 530
BseMII CTCAG 1 cut(s) 315
BsgI GTGCAG 1 cut(s) 603
Bsh1236I CGCG 1 cut(s) 437
BshFI GGCC 3 cut(s) 187, 412, 607
BsiSI CCGG 1 cut(s) 449
BslFI GGGAC 1 cut(s) 384
BslI CCNNNNNNNGG 2 cut(s) 229, 530
BsmAI GTCTC 2 cut(s) 275, 345
BsmFI GGGAC 1 cut(s) 384
BsnI GGCC 3 cut(s) 187, 412, 607
Bsp19I CCATGG 1 cut(s) 60
BspACI CCGC 4 cut(s) 332, 435, 500, 552
BspANI GGCC 3 cut(s) 187, 412, 607
BspCNI CTCAG 1 cut(s) 314
BspFNI CGCG 1 cut(s) 437
BspLI GGNNCC 2 cut(s) 34, 126
BspMI ACCTGC 1 cut(s) 575
BspTI CTTAAG 1 cut(s) 158
BssECI CCNNGG 1 cut(s) 60
BssT1I CCWWGG 1 cut(s) 60
Bst4CI ACNGT 1 cut(s) 568
BstAFI CTTAAG 1 cut(s) 158
BstBAI YACGTR 1 cut(s) 515
BstDEI CTNAG 3 cut(s) 288, 301, 468
BstDSI CCRYGG 1 cut(s) 60
BstF5I GGATG 1 cut(s) 43
BstFNI CGCG 1 cut(s) 437
BstMAI GTCTC 2 cut(s) 275, 345
BstMWI GCNNNNNNNGC 2 cut(s) 86, 604
BstSNI TACGTA 1 cut(s) 515
BstUI CGCG 1 cut(s) 437
BstV2I GAAGAC 1 cut(s) 225
BsuI GTATCC 1 cut(s) 233
BsuRI GGCC 3 cut(s) 187, 412, 607
BtgI CCRYGG 1 cut(s) 60
BtsCI GGATG 1 cut(s) 43
BveI ACCTGC 1 cut(s) 575
Cfr13I GGNCC 2 cut(s) 32, 185
Csp6I GTAC 1 cut(s) 512
CviAII CATG 3 cut(s) 61, 131, 667
CviQI GTAC 1 cut(s) 512
DdeI CTNAG 3 cut(s) 288, 301, 468
DraI TTTAAA 1 cut(s) 228
EaeI YGGCCR 1 cut(s) 605
Eco105I TACGTA 1 cut(s) 515
Eco130I CCWWGG 1 cut(s) 60
Eco147I AGGCCT 1 cut(s) 412
Eco47I GGWCC 1 cut(s) 32
EcoRI GAATTC 1 cut(s) 559
EcoT14I CCWWGG 1 cut(s) 60
EcoT22I ATGCAT 1 cut(s) 75
ErhI CCWWGG 1 cut(s) 60
FaeI CATG 3 cut(s) 64, 134, 670
FaqI GGGAC 1 cut(s) 384
FatI CATG 3 cut(s) 60, 130, 666
FokI GGATG 1 cut(s) 30
GsuI CTGGAG 1 cut(s) 158
HaeIII GGCC 3 cut(s) 187, 412, 607
HapII CCGG 1 cut(s) 449
Hin1II CATG 3 cut(s) 64, 134, 670
HindIII AAGCTT 1 cut(s) 707
HinfI GANTC 3 cut(s) 65, 284, 431
HpaII CCGG 1 cut(s) 449
HphI GGTGA 2 cut(s) 49, 440
Hpy188III TCNNGA 2 cut(s) 137, 272
Hpy99I CGWCG 1 cut(s) 42
HpyCH4III ACNGT 1 cut(s) 568
HpyCH4IV ACGT 1 cut(s) 514
HpyCH4V TGCA 4 cut(s) 73, 179, 584, 757
HpyF10VI GCNNNNNNNGC 2 cut(s) 86, 604
HpyF3I CTNAG 3 cut(s) 288, 301, 468
HpySE526I ACGT 1 cut(s) 514
Hsp92II CATG 3 cut(s) 64, 134, 670
LmnI GCTCC 3 cut(s) 124, 168, 292
LpnPI CCDG 9 cut(s) 60, 122, 183, 228, 426, 462, 570, 635, 678
LweI GCATC 1 cut(s) 106
MaeII ACGT 1 cut(s) 514
MaeIII GTNAC 1 cut(s) 515
MboII GAAGA 4 cut(s) 95, 230, 269, 388
MfeI CAATTG 1 cut(s) 180
MlsI TGGCCA 1 cut(s) 607
MluCI AATT 8 cut(s) 52, 99, 180, 194, 209, 559, 631, 752
MluNI TGGCCA 1 cut(s) 607
MlyI GAGTC 1 cut(s) 440
MmeI TCCRAC 2 cut(s) 511, 536
MnlI CCTC 6 cut(s) 133, 138, 198, 212, 470, 527
Mox20I TGGCCA 1 cut(s) 607
Mph1103I ATGCAT 1 cut(s) 75
MscI TGGCCA 1 cut(s) 607
MseI TTAA 4 cut(s) 51, 159, 227, 722
MslI CAYNNNNRTG 1 cut(s) 665
Msp20I TGGCCA 1 cut(s) 607
MspA1I CMGCKG 1 cut(s) 552
MspCI CTTAAG 1 cut(s) 158
MspI CCGG 1 cut(s) 449
MunI CAATTG 1 cut(s) 180
MvnI CGCG 1 cut(s) 437
MwoI GCNNNNNNNGC 2 cut(s) 86, 604
NcoI CCATGG 1 cut(s) 60
NlaIII CATG 3 cut(s) 64, 134, 670
NlaIV GGNNCC 2 cut(s) 34, 126
NsiI ATGCAT 1 cut(s) 75
PaqCI CACCTGC 1 cut(s) 575
PceI AGGCCT 1 cut(s) 412
PcsI WCGNNNNNNNCGW 1 cut(s) 279
PfeI GAWTC 2 cut(s) 65, 284
PflMI CCANNNNNTGG 1 cut(s) 530
PleI GAGTC 1 cut(s) 439
PpsI GAGTC 1 cut(s) 439
Ppu21I YACGTR 1 cut(s) 515
PspN4I GGNNCC 2 cut(s) 34, 126
PspPI GGNCC 2 cut(s) 32, 185
RsaI GTAC 1 cut(s) 513
RsaNI GTAC 1 cut(s) 512
RseI CAYNNNNRTG 1 cut(s) 665
SaqAI TTAA 4 cut(s) 51, 159, 227, 722
Sau96I GGNCC 2 cut(s) 32, 185
SchI GAGTC 1 cut(s) 440
SfaNI GCATC 1 cut(s) 106
SinI GGWCC 1 cut(s) 32
SmiMI CAYNNNNRTG 1 cut(s) 665
SmlI CTYRAG 1 cut(s) 158
SmoI CTYRAG 1 cut(s) 158
SnaBI TACGTA 1 cut(s) 515
Sse9I AATT 8 cut(s) 52, 99, 180, 194, 209, 559, 631, 752
SseBI AGGCCT 1 cut(s) 412
SsiI CCGC 4 cut(s) 332, 435, 500, 552
StuI AGGCCT 1 cut(s) 412
StyI CCWWGG 1 cut(s) 60
TaaI ACNGT 1 cut(s) 568
TaiI ACGT 1 cut(s) 517
TaqI TCGA 2 cut(s) 273, 282
TasI AATT 8 cut(s) 52, 99, 180, 194, 209, 559, 631, 752
TfiI GAWTC 2 cut(s) 65, 284
Tru1I TTAA 4 cut(s) 51, 159, 227, 722
Tru9I TTAA 4 cut(s) 51, 159, 227, 722
TspDTI ATGAA 2 cut(s) 95, 666
TspGWI ACGGA 1 cut(s) 45
Van91I CCANNNNNTGG 1 cut(s) 530
Vha464I CTTAAG 1 cut(s) 158
VpaK11BI GGWCC 1 cut(s) 32
XapI RAATTY 1 cut(s) 559
XcmI CCANNNNNNNNNTGG 1 cut(s) 527
Zsp2I ATGCAT 1 cut(s) 75
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.