MD17G1125700.v1.1

transferase activity, transferring hexosyl groups

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0000097
Physical Location & Seq
Reverse (-)
10954624 .. 10955820
1197 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1125700.v1.1.491

Sequence Viewer

Length: 888 bp
ATGGGCTATATGAAATATCTTGGTTTGGTGGAAAGAGGACTTGCACCACTCAAAGATGAGAGCAGTTTCACGAATGGCTTTTTAGACCAGATGATAGATTGGATTCCACGAATGAAACATATCCGTTTGAGGGATCTCCCTAACGACTTTGTGACAACAAATCTCAATGACAAAATTTTTAACAACTTTCTTGAAGTAACGAGTAGAGTTCATGAAGCTTCAGCAATTATTGTACATACCTTTGATTCAGCGGAGCAAGATGTTTTGGATGCCCTCTCAGGTATGTATCCACCTGTTTACGCCATTGGCCCTCTCCCGTTACTCCTCAATCAGATGCCACAACATCCCTTGAAGTCCTTGGGATACAGTCTGTGGAGAGAAGACGCTGAGTGTCTCCCATGGCTTGACGATAAGGAGCCAAACTCGGTTGTTTATGTGAATTTCTGCAGCATAACGGTCATGACACCAGAACAACTTGTGGAGTTTGGCTGGGGACTTGCAAAGAGCAAGCTTACTTTCTTCTGGGTAATTAGGTCTGACTTGGTAATTGGTAAATCAACAATTTTTCCAATTGAGTTTGCAGATGAAACTAAGGGAAGAAGTCTAGTAGCAAGTTGGTGCCCTCAAGAGCAGGTCACCCATCAATCAGCAAACAAGCAAACAAACTGTCACTGTACTTGCAAAGAATGGGGCACTGGTATGGAGATTGATAAAAATGTGAAAAGAGATGAAGTGGAAAATCTTGTTAGAGAGCGGATGCAAGGAAAGAATGGTAAGAGAATGAAGAATGAGGCCATGGAGTGGAAGAAATTGGCAGAGGAAGACACTGGTGCACGCGGTTCGTCATCTGGAAACTTAGAAAAATTTGTGAATCAATTTCAATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

296

Amino Acids

33.72

Weight (kDa)

5.49

Isoelectric Point (pI)

35.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 622
AccB1I GGYRCC 1 cut(s) 618
AccB7I CCANNNNNTGG 1 cut(s) 801
AccBSI CCGCTC 1 cut(s) 754
AccII CGCG 1 cut(s) 837
AciI CCGC 3 cut(s) 251, 754, 837
AclWI GGATC 1 cut(s) 141
AcsI RAATTY 3 cut(s) 174, 439, 863
AcuI CTGAAG 1 cut(s) 204
AfaI GTAC 2 cut(s) 234, 676
AfiI CCNNNNNNNGG 2 cut(s) 130, 801
AgsI TTSAA 3 cut(s) 194, 352, 881
AluBI AGCT 2 cut(s) 218, 511
AluI AGCT 2 cut(s) 218, 511
Alw21I GWGCWC 1 cut(s) 835
Alw26I GTCTC 1 cut(s) 398
Alw44I GTGCAC 1 cut(s) 831
AlwI GGATC 1 cut(s) 141
AoxI GGCC 2 cut(s) 307, 792
ApaLI GTGCAC 1 cut(s) 831
ApeKI GCWGC 1 cut(s) 447
ApoI RAATTY 3 cut(s) 174, 439, 863
ArsI GACNNNNNNTTYG 2 cut(s) 652, 684
AspS9I GGNCC 1 cut(s) 308
AsuHPI GGTGA 1 cut(s) 628
BaeGI GKGCMC 3 cut(s) 623, 695, 835
BanI GGYRCC 1 cut(s) 618
BbsI GAAGAC 2 cut(s) 387, 828
Bbv12I GWGCWC 1 cut(s) 835
BbvI GCAGC 1 cut(s) 459
BccI CCATC 1 cut(s) 648
BcgI CGANNNNNNTGC 2 cut(s) 822, 856
BciVI GTATCC 2 cut(s) 297, 356
BcoDI GTCTC 1 cut(s) 398
BfaI CTAG 1 cut(s) 605
BfmI CTRYAG 1 cut(s) 445
BfuAI ACCTGC 1 cut(s) 622
BfuI GTATCC 2 cut(s) 297, 356
BisI GCNGC 1 cut(s) 448
BlsI GCNGC 1 cut(s) 449
BmgT120I GGNCC 1 cut(s) 308
BmiI GGNNCC 2 cut(s) 417, 620
BmsI GCATC 3 cut(s) 259, 324, 747
BpiI GAAGAC 2 cut(s) 387, 828
BplI GAGNNNNNCTC 2 cut(s) 407, 439
BpuEI CTTGAG 1 cut(s) 609
BsaJI CCNNGG 3 cut(s) 357, 398, 795
Bsc4I CCNNNNNNNGG 2 cut(s) 130, 801
Bse1I ACTGG 2 cut(s) 700, 832
BseDI CCNNGG 3 cut(s) 357, 398, 795
BseGI GGATG 3 cut(s) 274, 343, 762
BseLI CCNNNNNNNGG 2 cut(s) 130, 801
BseMII CTCAG 2 cut(s) 291, 378
BseNI ACTGG 2 cut(s) 700, 832
BseRI GAGGAG 1 cut(s) 314
BseSI GKGCMC 3 cut(s) 623, 695, 835
BseXI GCAGC 1 cut(s) 459
BseYI CCCAGC 1 cut(s) 489
Bsh1236I CGCG 1 cut(s) 837
BshFI GGCC 2 cut(s) 309, 794
BshNI GGYRCC 1 cut(s) 618
BsiHKAI GWGCWC 1 cut(s) 835
BslFI GGGAC 1 cut(s) 507
BslI CCNNNNNNNGG 2 cut(s) 130, 801
BsmAI GTCTC 1 cut(s) 398
BsmFI GGGAC 1 cut(s) 507
BsnI GGCC 2 cut(s) 309, 794
Bsp1286I GDGCHC 3 cut(s) 623, 695, 835
Bsp1407I TGTACA 1 cut(s) 232
Bsp143I GATC 1 cut(s) 133
Bsp19I CCATGG 2 cut(s) 398, 795
BspACI CCGC 3 cut(s) 251, 754, 837
BspANI GGCC 2 cut(s) 309, 794
BspCNI CTCAG 2 cut(s) 290, 379
BspFNI CGCG 1 cut(s) 837
BspHI TCATGA 2 cut(s) 211, 459
BspLI GGNNCC 2 cut(s) 417, 620
BspMAI CTGCAG 1 cut(s) 449
BspMI ACCTGC 1 cut(s) 622
BspPI GGATC 1 cut(s) 141
BspT107I GGYRCC 1 cut(s) 618
BsrBI CCGCTC 1 cut(s) 754
BsrGI TGTACA 1 cut(s) 232
BsrI ACTGG 2 cut(s) 700, 832
BssECI CCNNGG 3 cut(s) 357, 398, 795
BssMI GATC 1 cut(s) 133
BssT1I CCWWGG 3 cut(s) 357, 398, 795
Bst4CI ACNGT 4 cut(s) 368, 457, 668, 674
BstAUI TGTACA 1 cut(s) 232
BstC8I GCNNGC 2 cut(s) 509, 835
BstDEI CTNAG 4 cut(s) 277, 387, 591, 856
BstDSI CCRYGG 2 cut(s) 398, 795
BstEII GGTNACC 1 cut(s) 634
BstF5I GGATG 3 cut(s) 274, 343, 762
BstFNI CGCG 1 cut(s) 837
BstKTI GATC 1 cut(s) 136
BstMAI GTCTC 1 cut(s) 398
BstMBI GATC 1 cut(s) 133
BstPI GGTNACC 1 cut(s) 634
BstSFI CTRYAG 1 cut(s) 445
BstSLI GKGCMC 3 cut(s) 623, 695, 835
BstUI CGCG 1 cut(s) 837
BstV1I GCAGC 1 cut(s) 459
BstV2I GAAGAC 2 cut(s) 387, 828
BstX2I RGATCY 1 cut(s) 133
BstYI RGATCY 1 cut(s) 133
BsuI GTATCC 2 cut(s) 297, 356
BsuRI GGCC 2 cut(s) 309, 794
BtgI CCRYGG 2 cut(s) 398, 795
BtsCI GGATG 3 cut(s) 274, 343, 762
BtsIMutI CAGTG 3 cut(s) 670, 693, 825
BveI ACCTGC 1 cut(s) 622
Cac8I GCNNGC 2 cut(s) 509, 835
CciI TCATGA 2 cut(s) 211, 459
Cfr13I GGNCC 1 cut(s) 308
CseI GACGC 1 cut(s) 392
Csp6I GTAC 2 cut(s) 233, 675
CviAII CATG 4 cut(s) 212, 399, 460, 796
CviJI RGCY 9 cut(s) 6, 78, 218, 309, 403, 418, 489, 511, 794
CviKI_1 RGCY 9 cut(s) 6, 78, 218, 309, 403, 418, 489, 511, 794
CviQI GTAC 2 cut(s) 233, 675
DdeI CTNAG 4 cut(s) 277, 387, 591, 856
DpnI GATC 1 cut(s) 135
DpnII GATC 1 cut(s) 133
Eco130I CCWWGG 3 cut(s) 357, 398, 795
Eco57I CTGAAG 1 cut(s) 204
Eco91I GGTNACC 1 cut(s) 634
EcoO65I GGTNACC 1 cut(s) 634
EcoT14I CCWWGG 3 cut(s) 357, 398, 795
ErhI CCWWGG 3 cut(s) 357, 398, 795
FaeI CATG 4 cut(s) 215, 402, 463, 799
FaqI GGGAC 1 cut(s) 507
FatI CATG 4 cut(s) 211, 398, 459, 795
Fnu4HI GCNGC 1 cut(s) 448
FokI GGATG 3 cut(s) 281, 330, 769
Fsp4HI GCNGC 1 cut(s) 448
FspBI CTAG 1 cut(s) 605
GluI GCNGC 1 cut(s) 448
GsaI CCCAGC 1 cut(s) 493
HaeIII GGCC 2 cut(s) 309, 794
HgaI GACGC 1 cut(s) 392
Hin1II CATG 4 cut(s) 215, 402, 463, 799
HindIII AAGCTT 2 cut(s) 216, 509
HinfI GANTC 3 cut(s) 103, 245, 871
HphI GGTGA 1 cut(s) 628
Hpy166II GTNNAC 2 cut(s) 298, 833
Hpy188I TCNGA 2 cut(s) 333, 538
Hpy188III TCNNGA 6 cut(s) 70, 191, 212, 460, 626, 849
Hpy8I GTNNAC 2 cut(s) 298, 833
HpyCH4III ACNGT 4 cut(s) 368, 457, 668, 674
HpyCH4V TGCA 7 cut(s) 44, 447, 500, 581, 681, 760, 833
HpyF3I CTNAG 4 cut(s) 277, 387, 591, 856
Hsp92II CATG 4 cut(s) 215, 402, 463, 799
Kzo9I GATC 1 cut(s) 133
LmnI GCTCC 2 cut(s) 253, 415
Lsp1109I GCAGC 1 cut(s) 459
LweI GCATC 3 cut(s) 259, 324, 747
MaeI CTAG 1 cut(s) 605
MaeIII GTNAC 5 cut(s) 151, 196, 318, 634, 668
MalI GATC 1 cut(s) 135
MbiI CCGCTC 1 cut(s) 754
MboI GATC 1 cut(s) 133
MboII GAAGA 6 cut(s) 392, 511, 609, 796, 817, 833
MfeI CAATTG 2 cut(s) 570, 881
MflI RGATCY 1 cut(s) 133
MhlI GDGCHC 3 cut(s) 623, 695, 835
MnlI CCTC 8 cut(s) 29, 123, 284, 321, 335, 633, 784, 811
MseI TTAA 1 cut(s) 180
MslI CAYNNNNRTG 1 cut(s) 698
MspA1I CMGCKG 1 cut(s) 251
MunI CAATTG 2 cut(s) 570, 881
MvnI CGCG 1 cut(s) 837
NcoI CCATGG 2 cut(s) 398, 795
NdeII GATC 1 cut(s) 133
NlaIII CATG 4 cut(s) 215, 402, 463, 799
NlaIV GGNNCC 2 cut(s) 417, 620
NmuCI GTSAC 3 cut(s) 151, 634, 668
PagI TCATGA 2 cut(s) 211, 459
PfeI GAWTC 3 cut(s) 103, 245, 871
PflMI CCANNNNNTGG 1 cut(s) 801
PkrI GCNGC 1 cut(s) 449
PspEI GGTNACC 1 cut(s) 634
PspFI CCCAGC 1 cut(s) 489
PspN4I GGNNCC 2 cut(s) 417, 620
PspPI GGNCC 1 cut(s) 308
PstI CTGCAG 1 cut(s) 449
PsuI RGATCY 1 cut(s) 133
RsaI GTAC 2 cut(s) 234, 676
RsaNI GTAC 2 cut(s) 233, 675
RseI CAYNNNNRTG 1 cut(s) 698
SaqAI TTAA 1 cut(s) 180
SatI GCNGC 1 cut(s) 448
Sau3AI GATC 1 cut(s) 133
Sau96I GGNCC 1 cut(s) 308
SduI GDGCHC 3 cut(s) 623, 695, 835
SetI ASST 7 cut(s) 220, 242, 283, 295, 513, 536, 636
SfaNI GCATC 3 cut(s) 259, 324, 747
SfcI CTRYAG 1 cut(s) 445
SmiMI CAYNNNNRTG 1 cut(s) 698
SmlI CTYRAG 1 cut(s) 624
SmoI CTYRAG 1 cut(s) 624
SsiI CCGC 3 cut(s) 251, 754, 837
SspMI CTAG 1 cut(s) 605
StyI CCWWGG 3 cut(s) 357, 398, 795
TaaI ACNGT 4 cut(s) 368, 457, 668, 674
TatI WGTACW 2 cut(s) 232, 674
TfiI GAWTC 3 cut(s) 103, 245, 871
Tru1I TTAA 1 cut(s) 180
Tru9I TTAA 1 cut(s) 180
TscAI CASTG 3 cut(s) 677, 700, 832
TseFI GTSAC 3 cut(s) 151, 634, 668
TseI GCWGC 1 cut(s) 447
Tsp45I GTSAC 3 cut(s) 151, 634, 668
TspDTI ATGAA 7 cut(s) 26, 128, 200, 228, 600, 744, 797
TspGWI ACGGA 1 cut(s) 113
TspRI CASTG 3 cut(s) 677, 700, 832
Van91I CCANNNNNTGG 1 cut(s) 801
VneI GTGCAC 1 cut(s) 831
XapI RAATTY 3 cut(s) 174, 439, 863
XspI CTAG 1 cut(s) 605
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.