Prupe.3G190100_v2.0.a1

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000097
Physical Location & Seq
Forward (+)
20296733 .. 20299688
2956 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G190100.1

Sequence Viewer

Length: 1449 bp
ATGGCAACAGCTAGTAAGCCTCATGCTGTATGCATCCCATTCCCATATCAAAGCCACATAAAGGCACTGCTCAAATTTGCAAAGCTCTTGCATCATAGAGGTTTTCATGTAACCTTTGTCAATACATTGTACAACCATAGACTCTTTCTCAAATCTTTAGGCCCCAACTCCCTTGATGGCTTGCCAGACTTTCAGTTTGAAGCCATCCCAGATGGCCTTCCAACTTCAGATTCAGATTCCACCCAAGACCTCGCTGCTCTTTCTGATTCCATATTAAATACAAACCACTTCTTGGATTCGTTTCGCGATCTCCTCGCGAAACTCAATCTCGATGCAGCAACTTCCAACACTTGTCCTGTGACTTGTATTGTAGCAGATGGTTTCATGCCCTTCTCCACCACTGTCGCCGAAGATCTTGGAATTCCCTGGGTGTCGTTCTTCACTATTGCTGCATGTGGCTTCATGGCCATCAAACACTTTCGTGCCCTGGTGGAAAGAGGATTTACACCCCTAAAAGATGAGACATATCTAACTAATGGCTACCTAGACACAGTCATAGATTGGATACCTGGACTGAAAAGCATCCGGCTAAGGGATCTTCCAAGCTTTGTTCGAACTACAGATACCAAAAGCATTGTGTTTAACCTTGGCATAGAAGCAACTGAAAAGGCAAACAAGGCTTCTGCAGTTGTTATACATACTTATGATGCGTTGGAGCGGGAAGTTTTGGATGCTCTCTCATCTATGCTTCCCCTTGTTTACACCATCGGCCCTCTCCAATTACTCGTCAACCAGCTGCCAGAAGACCCTCTGAAATCTGTAGGATACAGTCTATGGAAAGAAGAAACTGGCTGCCTCCAGTGGCTGAACACCAAGGCCCCAAACTCGGTTGTTTATGTGAATTTTGGCAGTGTAGTCGTGATGACACCAGAACAACTTGTTGAGTTTGGTTGGGGACTTGCAAACAGCAAGCATTTTTTCTTGTGGGTAATTAGGCCTGATTTGGTTGTTGGTGACTCAGCCATTTTGCCAGCTGAGTTTGTGGATGAAACAAAAGAAAGAGGACTAATAGCAAGCTGGTGCCCACAAGAGCAAGTCCTTAACCACCCATCAGTTGGAGGGTTTTTGACACACAGCGGTTGGAACTCAACGATCGAGAGCCTGAGTGCAGGGGTGCCTATGATCTGCTGGCCGTTCGTTTCGGAGCAGCTAACAAATTGTTGGTATACTTGCAATGAGCTGGGCTGTGGGATGGAGATTGATAGCAATGTGAAAAGAGATGAAGTTGAGAAGCTTGTTAGAGAGTTGATTGAGGGAGAGAAGGGTGAGAAAATGAGAAATACGGCTGATGGGTGGAAGAAACTAGCAGAAGAGGCCACTGGTGCACAAGGTTCTTCAGTCATAAACTTGGACAACTTAGTGAACCATGTGCTTCTAAGGAAAAGCTAA

Protein Analysis

483

Amino Acids

53.4

Weight (kDa)

5.22

Isoelectric Point (pI)

31.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1080, 1174
AccB7I CCANNNNNTGG 2 cut(s) 292, 1115
AccBSI CCGCTC 1 cut(s) 718
AccI GTMKAC 1 cut(s) 1226
AccII CGCG 2 cut(s) 306, 317
AciI CCGC 2 cut(s) 718, 1137
AclWI GGATC 1 cut(s) 603
AcoI YGGCCR 2 cut(s) 465, 1190
AcsI RAATTY 3 cut(s) 74, 420, 901
AcuI CTGAAG 2 cut(s) 210, 1380
AfaI GTAC 1 cut(s) 131
AfiI CCNNNNNNNGG 5 cut(s) 61, 292, 592, 886, 1115
AgsI TTSAA 1 cut(s) 200
AjnI CCWGG 3 cut(s) 425, 486, 568
AjuI GAANNNNNNNTTGG 2 cut(s) 214, 246
AleI CACNNNNGTG 1 cut(s) 480
Alw21I GWGCWC 1 cut(s) 1387
Alw26I GTCTC 1 cut(s) 515
Alw44I GTGCAC 1 cut(s) 1383
AlwI GGATC 1 cut(s) 603
AlwNI CAGNNNCTG 1 cut(s) 865
AoxI GGCC 8 cut(s) 160, 214, 465, 769, 876, 995, 1190, 1374
ApaLI GTGCAC 1 cut(s) 1383
ApeKI GCWGC 6 cut(s) 254, 335, 449, 796, 852, 1207
ApoI RAATTY 3 cut(s) 74, 420, 901
ArsI GACNNNNNNTTYG 2 cut(s) 179, 211
AspS9I GGNCC 3 cut(s) 161, 770, 877
AsuHPI GGTGA 2 cut(s) 1025, 1337
AsuII TTCGAA 1 cut(s) 613
BaeGI GKGCMC 3 cut(s) 487, 1085, 1387
BalI TGGCCA 1 cut(s) 467
BanI GGYRCC 2 cut(s) 1080, 1174
BbsI GAAGAC 1 cut(s) 810
Bbv12I GWGCWC 1 cut(s) 1387
BbvI GCAGC 6 cut(s) 241, 347, 436, 783, 839, 1219
BccI CCATC 9 cut(s) 170, 206, 212, 371, 476, 773, 1117, 1246, 1343
BceAI ACGGC 2 cut(s) 1177, 1359
BcgI CGANNNNNNTGC 2 cut(s) 898, 932
BciT130I CCWGG 3 cut(s) 427, 488, 570
BciVI GTATCC 2 cut(s) 558, 818
BcoDI GTCTC 1 cut(s) 515
BfaI CTAG 3 cut(s) 12, 545, 1364
BfmI CTRYAG 3 cut(s) 618, 684, 819
BfuI GTATCC 2 cut(s) 558, 818
BglII AGATCT 1 cut(s) 412
BisI GCNGC 6 cut(s) 255, 336, 450, 797, 853, 1208
BlsI GCNGC 6 cut(s) 256, 337, 451, 798, 854, 1209
Bme1390I CCNGG 3 cut(s) 427, 488, 570
BmgT120I GGNCC 3 cut(s) 161, 770, 877
BmiI GGNNCC 4 cut(s) 163, 879, 1082, 1176
BmrFI CCNGG 3 cut(s) 427, 488, 570
BmsI GCATC 6 cut(s) 42, 100, 322, 591, 697, 721
BpiI GAAGAC 1 cut(s) 810
BpmI CTGGAG 1 cut(s) 842
Bpu10I CCTNAGC 1 cut(s) 590
Bpu14I TTCGAA 1 cut(s) 613
BsaJI CCNNGG 5 cut(s) 425, 426, 486, 646, 873
Bsc4I CCNNNNNNNGG 5 cut(s) 61, 292, 592, 886, 1115
Bse1I ACTGG 3 cut(s) 853, 859, 1384
Bse3DI GCAATG 2 cut(s) 1240, 1273
BseBI CCWGG 3 cut(s) 427, 488, 570
BseDI CCNNGG 5 cut(s) 425, 426, 486, 646, 873
BseGI GGATG 6 cut(s) 33, 204, 582, 736, 1051, 1257
BseLI CCNNNNNNNGG 5 cut(s) 61, 292, 592, 886, 1115
BseMI GCAATG 2 cut(s) 1240, 1273
BseMII CTCAG 3 cut(s) 1026, 1032, 1154
BseNI ACTGG 3 cut(s) 853, 859, 1384
BseRI GAGGAG 1 cut(s) 302
BseSI GKGCMC 3 cut(s) 487, 1085, 1387
BseXI GCAGC 6 cut(s) 241, 347, 436, 783, 839, 1219
BseYI CCCAGC 1 cut(s) 1240
BsgI GTGCAG 1 cut(s) 1188
Bsh1236I CGCG 2 cut(s) 306, 317
Bsh1285I CGRYCG 1 cut(s) 1155
BshFI GGCC 8 cut(s) 162, 216, 467, 771, 878, 997, 1192, 1376
BshNI GGYRCC 2 cut(s) 1080, 1174
BsiEI CGRYCG 1 cut(s) 1155
BsiHKAI GWGCWC 1 cut(s) 1387
BsiSI CCGG 1 cut(s) 586
BslFI GGGAC 1 cut(s) 969
BslI CCNNNNNNNGG 5 cut(s) 61, 292, 592, 886, 1115
BsmAI GTCTC 1 cut(s) 515
BsmFI GGGAC 1 cut(s) 969
BsnI GGCC 8 cut(s) 162, 216, 467, 771, 878, 997, 1192, 1376
Bsp119I TTCGAA 1 cut(s) 613
Bsp1286I GDGCHC 3 cut(s) 487, 1085, 1387
Bsp1407I TGTACA 1 cut(s) 129
Bsp143I GATC 5 cut(s) 307, 412, 595, 1152, 1182
Bsp68I TCGCGA 2 cut(s) 306, 317
BspACI CCGC 2 cut(s) 718, 1137
BspANI GGCC 8 cut(s) 162, 216, 467, 771, 878, 997, 1192, 1376
BspCNI CTCAG 3 cut(s) 1027, 1031, 1155
BspFNI CGCG 2 cut(s) 306, 317
BspLI GGNNCC 4 cut(s) 163, 879, 1082, 1176
BspMAI CTGCAG 1 cut(s) 688
BspPI GGATC 1 cut(s) 603
BspT104I TTCGAA 1 cut(s) 613
BspT107I GGYRCC 2 cut(s) 1080, 1174
BsrBI CCGCTC 1 cut(s) 718
BsrDI GCAATG 2 cut(s) 1240, 1273
BsrGI TGTACA 1 cut(s) 129
BsrI ACTGG 3 cut(s) 853, 859, 1384
BssECI CCNNGG 5 cut(s) 425, 426, 486, 646, 873
BssMI GATC 5 cut(s) 307, 412, 595, 1152, 1182
BssNAI GTATAC 1 cut(s) 1227
BssT1I CCWWGG 2 cut(s) 646, 873
Bst1107I GTATAC 1 cut(s) 1227
Bst2UI CCWGG 3 cut(s) 427, 488, 570
Bst4CI ACNGT 3 cut(s) 403, 553, 830
Bst6I CTCTTC 1 cut(s) 1365
BstAUI TGTACA 1 cut(s) 129
BstBI TTCGAA 1 cut(s) 613
BstC8I GCNNGC 5 cut(s) 182, 971, 1032, 1075, 1190
BstDEI CTNAG 6 cut(s) 590, 1018, 1035, 1163, 1417, 1436
BstF5I GGATG 6 cut(s) 33, 204, 582, 736, 1051, 1257
BstFNI CGCG 2 cut(s) 306, 317
BstKTI GATC 5 cut(s) 310, 415, 598, 1155, 1185
BstMAI GTCTC 1 cut(s) 515
BstMBI GATC 5 cut(s) 307, 412, 595, 1152, 1182
BstMCI CGRYCG 1 cut(s) 1155
BstMWI GCNNNNNNNGC 3 cut(s) 677, 1373, 1382
BstNI CCWGG 3 cut(s) 427, 488, 570
BstNSI RCATGY 1 cut(s) 456
BstSCI CCNGG 3 cut(s) 425, 486, 568
BstSFI CTRYAG 3 cut(s) 618, 684, 819
BstSLI GKGCMC 3 cut(s) 487, 1085, 1387
BstUI CGCG 2 cut(s) 306, 317
BstV1I GCAGC 6 cut(s) 241, 347, 436, 783, 839, 1219
BstV2I GAAGAC 1 cut(s) 810
BstX2I RGATCY 2 cut(s) 412, 595
BstYI RGATCY 2 cut(s) 412, 595
BstZ17I GTATAC 1 cut(s) 1227
BsuI GTATCC 2 cut(s) 558, 818
BsuRI GGCC 8 cut(s) 162, 216, 467, 771, 878, 997, 1192, 1376
BtsCI GGATG 6 cut(s) 33, 204, 582, 736, 1051, 1257
BtsI GCAGTG 2 cut(s) 65, 916
BtsIMutI CAGTG 5 cut(s) 65, 399, 866, 916, 1377
BtuMI TCGCGA 2 cut(s) 306, 317
Cac8I GCNNGC 5 cut(s) 182, 971, 1032, 1075, 1190
CaiI CAGNNNCTG 1 cut(s) 865
Cfr13I GGNCC 3 cut(s) 161, 770, 877
Csp6I GTAC 1 cut(s) 130
CviAII CATG 6 cut(s) 23, 107, 385, 453, 463, 1427
CviQI GTAC 1 cut(s) 130
DdeI CTNAG 6 cut(s) 590, 1018, 1035, 1163, 1417, 1436
DpnI GATC 5 cut(s) 309, 414, 597, 1154, 1184
DpnII GATC 5 cut(s) 307, 412, 595, 1152, 1182
EaeI YGGCCR 2 cut(s) 465, 1190
Eam1104I CTCTTC 1 cut(s) 1365
EarI CTCTTC 1 cut(s) 1365
Eco130I CCWWGG 2 cut(s) 646, 873
Eco147I AGGCCT 1 cut(s) 997
Eco57I CTGAAG 2 cut(s) 210, 1380
EcoO109I RGGNCCY 2 cut(s) 161, 877
EcoRI GAATTC 1 cut(s) 420
EcoRII CCWGG 3 cut(s) 425, 486, 568
EcoT14I CCWWGG 2 cut(s) 646, 873
EcoT22I ATGCAT 1 cut(s) 35
ErhI CCWWGG 2 cut(s) 646, 873
FaeI CATG 6 cut(s) 26, 110, 388, 456, 466, 1430
FaqI GGGAC 1 cut(s) 969
FatI CATG 6 cut(s) 22, 106, 384, 452, 462, 1426
FauI CCCGC 1 cut(s) 711
FblI GTMKAC 1 cut(s) 1226
Fnu4HI GCNGC 6 cut(s) 255, 336, 450, 797, 853, 1208
FokI GGATG 6 cut(s) 20, 191, 569, 743, 1058, 1264
Fsp4HI GCNGC 6 cut(s) 255, 336, 450, 797, 853, 1208
FspBI CTAG 3 cut(s) 12, 545, 1364
GluI GCNGC 6 cut(s) 255, 336, 450, 797, 853, 1208
GsaI CCCAGC 1 cut(s) 1244
GsuI CTGGAG 1 cut(s) 842
HaeIII GGCC 8 cut(s) 162, 216, 467, 771, 878, 997, 1192, 1376
HapII CCGG 1 cut(s) 586
Hin1II CATG 6 cut(s) 26, 110, 388, 456, 466, 1430
HincII GTYRAC 1 cut(s) 790
HindII GTYRAC 1 cut(s) 790
HindIII AAGCTT 2 cut(s) 604, 1292
HinfI GANTC 6 cut(s) 141, 230, 236, 266, 296, 1016
HpaII CCGG 1 cut(s) 586
HphI GGTGA 2 cut(s) 1025, 1337
Hpy166II GTNNAC 5 cut(s) 760, 790, 1227, 1385, 1423
Hpy188I TCNGA 5 cut(s) 229, 235, 265, 813, 1204
Hpy188III TCNNGA 5 cut(s) 305, 316, 329, 919, 1156
Hpy8I GTNNAC 5 cut(s) 760, 790, 1227, 1385, 1423
HpyAV CCTTC 3 cut(s) 227, 400, 1315
HpyCH4III ACNGT 3 cut(s) 403, 553, 830
HpyF10VI GCNNNNNNNGC 3 cut(s) 677, 1373, 1382
HpyF3I CTNAG 6 cut(s) 590, 1018, 1035, 1163, 1417, 1436
Hsp92II CATG 6 cut(s) 26, 110, 388, 456, 466, 1430
Kzo9I GATC 5 cut(s) 307, 412, 595, 1152, 1182
LmnI GCTCC 2 cut(s) 715, 1204
Lsp1109I GCAGC 6 cut(s) 241, 347, 436, 783, 839, 1219
LweI GCATC 6 cut(s) 42, 100, 322, 591, 697, 721
MaeI CTAG 3 cut(s) 12, 545, 1364
MaeIII GTNAC 3 cut(s) 109, 358, 1013
MalI GATC 5 cut(s) 309, 414, 597, 1154, 1184
MbiI CCGCTC 1 cut(s) 718
MboI GATC 5 cut(s) 307, 412, 595, 1152, 1182
MboII GAAGA 8 cut(s) 422, 430, 590, 815, 854, 1369, 1382, 1386
MflI RGATCY 2 cut(s) 412, 595
MhlI GDGCHC 3 cut(s) 487, 1085, 1387
MlsI TGGCCA 1 cut(s) 467
MluCI AATT 6 cut(s) 74, 420, 779, 901, 990, 1216
MluNI TGGCCA 1 cut(s) 467
MlyI GAGTC 2 cut(s) 135, 1010
MmeI TCCRAC 5 cut(s) 245, 369, 693, 1096, 1121
Mox20I TGGCCA 1 cut(s) 467
Mph1103I ATGCAT 1 cut(s) 35
MscI TGGCCA 1 cut(s) 467
MseI TTAA 3 cut(s) 275, 642, 1101
MslI CAYNNNNRTG 2 cut(s) 480, 702
Msp20I TGGCCA 1 cut(s) 467
MspA1I CMGCKG 3 cut(s) 796, 1034, 1137
MspI CCGG 1 cut(s) 586
MspR9I CCNGG 3 cut(s) 427, 488, 570
MvaI CCWGG 3 cut(s) 427, 488, 570
MvnI CGCG 2 cut(s) 306, 317
MwoI GCNNNNNNNGC 3 cut(s) 677, 1373, 1382
NdeII GATC 5 cut(s) 307, 412, 595, 1152, 1182
NlaIII CATG 6 cut(s) 26, 110, 388, 456, 466, 1430
NlaIV GGNNCC 4 cut(s) 163, 879, 1082, 1176
NmuCI GTSAC 2 cut(s) 358, 1013
NruI TCGCGA 2 cut(s) 306, 317
NsiI ATGCAT 1 cut(s) 35
NspI RCATGY 1 cut(s) 456
NspV TTCGAA 1 cut(s) 613
OliI CACNNNNGTG 1 cut(s) 480
PasI CCCWGGG 1 cut(s) 426
PceI AGGCCT 1 cut(s) 997
PfeI GAWTC 4 cut(s) 230, 236, 266, 296
PflFI GACNNNGTC 1 cut(s) 551
PflMI CCANNNNNTGG 2 cut(s) 292, 1115
PkrI GCNGC 6 cut(s) 256, 337, 451, 798, 854, 1209
Ple19I CGATCG 1 cut(s) 1155
PleI GAGTC 2 cut(s) 135, 1010
PpsI GAGTC 2 cut(s) 135, 1010
Psp6I CCWGG 3 cut(s) 425, 486, 568
PspFI CCCAGC 1 cut(s) 1240
PspGI CCWGG 3 cut(s) 425, 486, 568
PspN4I GGNNCC 4 cut(s) 163, 879, 1082, 1176
PspPI GGNCC 3 cut(s) 161, 770, 877
PsrI GAACNNNNNNTAC 2 cut(s) 607, 639
PstI CTGCAG 1 cut(s) 688
PstNI CAGNNNCTG 1 cut(s) 865
PsuI RGATCY 2 cut(s) 412, 595
PsyI GACNNNGTC 1 cut(s) 551
PvuI CGATCG 1 cut(s) 1155
PvuII CAGCTG 2 cut(s) 796, 1034
RruI TCGCGA 2 cut(s) 306, 317
RsaI GTAC 1 cut(s) 131
RsaNI GTAC 1 cut(s) 130
RseI CAYNNNNRTG 2 cut(s) 480, 702
SaqAI TTAA 3 cut(s) 275, 642, 1101
SatI GCNGC 6 cut(s) 255, 336, 450, 797, 853, 1208
Sau3AI GATC 5 cut(s) 307, 412, 595, 1152, 1182
Sau96I GGNCC 3 cut(s) 161, 770, 877
SchI GAGTC 2 cut(s) 135, 1010
ScrFI CCNGG 3 cut(s) 427, 488, 570
SduI GDGCHC 3 cut(s) 487, 1085, 1387
SfaNI GCATC 6 cut(s) 42, 100, 322, 591, 697, 721
SfcI CTRYAG 3 cut(s) 618, 684, 819
SfuI TTCGAA 1 cut(s) 613
SmiMI CAYNNNNRTG 2 cut(s) 480, 702
Sse9I AATT 6 cut(s) 74, 420, 779, 901, 990, 1216
SseBI AGGCCT 1 cut(s) 997
SsiI CCGC 2 cut(s) 718, 1137
SspMI CTAG 3 cut(s) 12, 545, 1364
StuI AGGCCT 1 cut(s) 997
StyD4I CCNGG 3 cut(s) 425, 486, 568
StyI CCWWGG 2 cut(s) 646, 873
TaaI ACNGT 3 cut(s) 403, 553, 830
TaqI TCGA 3 cut(s) 330, 613, 1155
TasI AATT 6 cut(s) 74, 420, 779, 901, 990, 1216
TatI WGTACW 1 cut(s) 129
TfiI GAWTC 4 cut(s) 230, 236, 266, 296
Tru1I TTAA 3 cut(s) 275, 642, 1101
Tru9I TTAA 3 cut(s) 275, 642, 1101
TscAI CASTG 5 cut(s) 72, 406, 866, 916, 1384
TseFI GTSAC 2 cut(s) 358, 1013
TseI GCWGC 6 cut(s) 254, 335, 449, 796, 852, 1207
Tsp45I GTSAC 2 cut(s) 358, 1013
TspDTI ATGAA 5 cut(s) 95, 373, 451, 1062, 1296
TspRI CASTG 5 cut(s) 72, 406, 866, 916, 1384
Tth111I GACNNNGTC 1 cut(s) 551
Van91I CCANNNNNTGG 2 cut(s) 292, 1115
VneI GTGCAC 1 cut(s) 1383
XapI RAATTY 3 cut(s) 74, 420, 901
XceI RCATGY 1 cut(s) 456
XcmI CCANNNNNNNNNTGG 1 cut(s) 1112
XmiI GTMKAC 1 cut(s) 1226
XspI CTAG 3 cut(s) 12, 545, 1364
Zsp2I ATGCAT 1 cut(s) 35
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.