Rorug03G0257000

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000097
Physical Location & Seq
Reverse (-)
24468192 .. 24471005
2814 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0257000.1

Sequence Viewer

Length: 2532 bp
ATGAAGCCAGTTCTCATCCCTCTCTACCTTTCTGTGTTTCAGTACATCATCGTCCAACTGGTGGCCGGTCAGTCGCCACCTATATACACTCCTACTGATAATATCACCCTTAACTGTGGCTCATCCGGTCACAATGTCAGTGACTATGATTCTCGAAATTGGACTGGAGATATCAACTCAAAGCTTTCCCCTATAGAAGTTGGTCGCGCATCCCAAGCTTTGAAAGCACTACCATCGTCCTCCTCGAGAGGTACCGTACGCCACAGCCAAGTACCGTACCCCACAGCAAGGCTTTCTTACTCGGAATTCACTTATCGATTTCCCGTCAGTCCGGGCCAGAAGTTCATTCGCTTATACTTCTACCCAGCTTCATACAGCGCCGAGTTCTCCCTCTCCGTGTCTCTTTTCTCTGTCAAAGTCGGTGTCTTCACTCTTCTCAAAGACTTTAACGCTTCTGCAAATGCCGATGCTGATCGTTCTGAGACGGTGCTCAAAGAATTTTGTACTAACGTTGAGCGAGAACAACAGATCCTTAACATCACATTCACTCCCAGCAAAAAGGCATATGCTTTCATCAACGGGATTGAAATATGGTCGATGCCAACAAATCTTTATTACTCTACTGCTAACTCTCTCAGCAGCAGAAACTCATATCCAGTCAAAAACAGCACAGCTCTACAGATGCTATACCGAATCAACGTTGGCGGAAGCATAGTTTCGCCCAAGGAAGACACCGGCTTGTACCGGACTTGGGATGCCACAGACCTCCTTTATTTGGATGATCAAAGTACAAGACTCAGTGTTCTTCAACAGAACAGGACTGTTGAACTCAAATTTATCAAAATACCAGAGTACATAGCCCCAAAAGTAGTTTACCAAACAGGTCGGTCAATGGGGATGAACAAAACCATCAACGAGAATTACAACCTCACCTGGTTATTTCCGGTAGACTCTAACTTCTCCTACCTTATTAGATTGCATTTTTGTGAGTTTGAGTCTGAAATTACCAAGAGCGGAAACCGGACGTTTATAATTTACATAGCCAATCAAACTGCTGAACAAGGAGCAGACATAATTCAATGGAGTGGTGGAAATGGGATACCGATATACAGAGACTACATCTTGCTCATGTCTGACCCTGGAAGCCAGAAGAGAGTTAACCTCTCTATTGCGTTGCAAGTATCCCCACTAGATTGGTTGAGTACATATACCGATGCATTGATGAATGGGATCGAAATCTTCAAATTATTCAACCCAGATGGCAATAATGTCCCTCTGAAACGCAACCCACCACCAGAGGAGACACCAAAACAGCAAACTTCACACTACAAGCTGACAACACAAGTACAAATCATCATTGCTGCTGTTGTGTCCAGCATACTTGTGTTTTTCGTCCTCGGATTTTTGGTCATCAAGCAACAATGGAAAGCTAAGGACACTGACTCCAGCCACAGGATAACGAGGTCAACCATGATCCCAGAGTCACCTTTACCTTCTTATTTGTGTCGTTACTTTTCACTGGCAGAGATCAAGGCTGCCACCAAAAACTTCAATGATACTTTCATTATTGGAGCTGGAGGATTTGGCAACGTGTACAAAGGATGTATCGAAGGTGGAGTCACTCCAGTTGCAATCAAAAGACTGAAACCAGAGTCATCCCAGGGTGCCCACGAGTTTAAGACGGAAATCGAGATGCTCTCTCAACTTCGTCATCGTCATTTGGTTTCGCTCATTGGATATTGTGCTGATAAAGGTGAGATGATCTTAGTGTACGAGTATATGTCCCGTGGAACCCTTCGTGACCATCTCTACCACAATAATAAACCACCTCTTTCTTGGAAGCAACGGCTTCAGATTTGTATTGGCACAGCCCGCGGGTTGCAATACCTCCACAGTGGTGCGAAGGGCACCATCATACACCGTGATGTGAAGAGCACAAACATCTTATTGGATGACAAATGGGTAGCCAAAGTTTCAGATTTTGGGTTGTCCAAGGGCACGACTAACATGTCCAAAACCCACATCAGCACGGTGGTGAAAGGTAGTTTTGGGTATCTGGACCCGGAGTACTACCGCCGACAACGTCTGACTGAGAAGTCAGACGTGTACTCACTTGGTGTAGTGTTGTTTGAGGTATTGTGTGCAAGGCCAGCAGTGATGCAGGCAGAAGAGCTGAAGCAGGTGAGCCTGGCTGAGTGGGCCAAGAGCTGTCATCAGAATGGGGAAATTGATCAAATCATTGATCCAAGTTTAAGAGGTAAGATCGCAGCCGAGTGCCTGAATAAGTTCACCGAAATAGCTATCAGTTGCATGCATGACAATGGAACAGAACGGCCGTCCATGACTGATGTTGTTAGGGGGCTTGAACTTGCATTGCAGCTTCAGCAGTGTGCAGAAGGGAATATCAACTGCACTGAAGGGATTGTTGAAACTGAACCAAGCAGTAATGAGCAAAGACTTGCCACCAACGATTCCATTAAATGTATATCAGCAACTATCTTCTCTGAGATTAACAACCCAAGTGGGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

843

Amino Acids

94.48

Weight (kDa)

8.42

Isoelectric Point (pI)

46.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 38 - 415 7.9e-30 Malectin-like domain
Malectin PF11721 256 - 374 5.9e-08 Malectin domain
Pkinase PF00069 522 - 785 6.5e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 523 - 787 2.2e-51 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1031
AarI CACCTGC 1 cut(s) 2170
AasI GACNNNNNNGTC 2 cut(s) 2008, 2095
Acc36I ACCTGC 1 cut(s) 2170
Acc65I GGTACC 1 cut(s) 251
AccB1I GGYRCC 3 cut(s) 251, 1664, 1907
AccB7I CCANNNNNTGG 1 cut(s) 61
AccBSI CCGCTC 1 cut(s) 1014
AccI GTMKAC 1 cut(s) 948
AccII CGCG 2 cut(s) 207, 1875
AciI CCGC 5 cut(s) 705, 1014, 1873, 1875, 2074
AclI AACGTT 2 cut(s) 510, 699
AclWI GGATC 4 cut(s) 523, 1238, 1468, 2237
AcoI YGGCCR 2 cut(s) 63, 2333
AcsI RAATTY 3 cut(s) 305, 497, 833
AcuI CTGAAG 4 cut(s) 1835, 2195, 2366, 2436
AdeI CACNNNGTG 1 cut(s) 2117
AfiI CCNNNNNNNGG 5 cut(s) 61, 288, 751, 775, 1452
AflIII ACRYGT 3 cut(s) 1590, 2007, 2103
AjiI CACGTC 1 cut(s) 2104
AjnI CCWGG 4 cut(s) 932, 1138, 1659, 2187
AleI CACNNNNGTG 2 cut(s) 1896, 2033
AloI GAACNNNNNNTCC 2 cut(s) 513, 545
Alw21I GWGCWC 2 cut(s) 492, 1937
Alw26I GTCTC 4 cut(s) 405, 476, 1107, 1295
AlwI GGATC 4 cut(s) 523, 1238, 1468, 2237
Ama87I CYCGRG 1 cut(s) 244
AoxI GGCC 5 cut(s) 63, 334, 2147, 2199, 2333
ApeKI GCWGC 5 cut(s) 639, 1361, 1535, 2267, 2377
ApoI RAATTY 3 cut(s) 305, 497, 833
ArsI GACNNNNNNTTYG 4 cut(s) 408, 440, 1602, 1634
Asp700I GAANNNNTTC 1 cut(s) 2285
Asp718I GGTACC 1 cut(s) 251
AspLEI GCGC 2 cut(s) 209, 380
AspS9I GGNCC 3 cut(s) 334, 2059, 2199
AsuC2I CCSGG 2 cut(s) 333, 2063
AsuHPI GGTGA 7 cut(s) 97, 922, 1476, 1766, 2047, 2194, 2281
AvaI CYCGRG 1 cut(s) 244
AvaII GGWCC 1 cut(s) 2059
BaeGI GKGCMC 3 cut(s) 1669, 1910, 2000
BanI GGYRCC 3 cut(s) 251, 1664, 1907
BauI CACGAG 1 cut(s) 1670
BbsI GAAGAC 2 cut(s) 418, 735
Bbv12I GWGCWC 2 cut(s) 492, 1937
BbvI GCAGC 5 cut(s) 651, 1348, 1522, 2279, 2389
BccI CCATC 5 cut(s) 241, 917, 1253, 1812, 1919
BceAI ACGGC 3 cut(s) 1862, 2320, 2348
BcgI CGANNNNNNTGC 2 cut(s) 216, 250
BciT130I CCWGG 4 cut(s) 934, 1140, 1661, 2189
BciVI GTATCC 2 cut(s) 1092, 1192
BclI TGATCA 2 cut(s) 781, 2230
BcnI CCSGG 2 cut(s) 333, 2063
BcoDI GTCTC 4 cut(s) 405, 476, 1107, 1295
BfaI CTAG 1 cut(s) 1190
BfmI CTRYAG 2 cut(s) 192, 677
BfoI RGCGCY 1 cut(s) 381
BfuAI ACCTGC 1 cut(s) 2170
BfuI GTATCC 2 cut(s) 1092, 1192
BisI GCNGC 5 cut(s) 640, 1362, 1536, 2268, 2378
BlsI GCNGC 5 cut(s) 641, 1363, 1537, 2269, 2379
BmcAI AGTACT 1 cut(s) 2069
Bme1390I CCNGG 6 cut(s) 333, 934, 1140, 1661, 2063, 2189
Bme18I GGWCC 1 cut(s) 2059
BmeT110I CYCGRG 1 cut(s) 244
BmgBI CACGTC 1 cut(s) 2104
BmgT120I GGNCC 3 cut(s) 334, 2059, 2199
BmiI GGNNCC 5 cut(s) 253, 1666, 1792, 1909, 2061
BmrFI CCNGG 6 cut(s) 333, 934, 1140, 1661, 2063, 2189
BmsI GCATC 8 cut(s) 218, 457, 588, 672, 745, 1204, 1683, 2148
BpiI GAAGAC 2 cut(s) 418, 735
BplI GAGNNNNNCTC 4 cut(s) 1146, 1178, 1682, 1714
BpmI CTGGAG 4 cut(s) 186, 1429, 1596, 1608
Bpu10I CCTNAGC 1 cut(s) 1431
BpuMI CCSGG 2 cut(s) 333, 2063
Bsa29I ATCGAT 1 cut(s) 316
BsaBI GATNNNNATC 2 cut(s) 471, 1235
BsaJI CCNNGG 8 cut(s) 723, 1138, 1396, 1659, 1660, 1786, 1873, 1992
BsaWI WCCGGW 4 cut(s) 125, 744, 943, 1020
BsaXI ACNNNNNCTCC 4 cut(s) 532, 562, 1427, 1457
Bsc4I CCNNNNNNNGG 5 cut(s) 61, 288, 751, 775, 1452
Bse118I RCCGGY 2 cut(s) 65, 734
Bse1I ACTGG 6 cut(s) 8, 63, 169, 656, 1524, 1625
Bse3DI GCAATG 2 cut(s) 1356, 2372
Bse8I GATNNNNATC 2 cut(s) 471, 1235
BseBI CCWGG 4 cut(s) 934, 1140, 1661, 2189
BseCI ATCGAT 1 cut(s) 316
BseDI CCNNGG 8 cut(s) 723, 1138, 1396, 1659, 1660, 1786, 1873, 1992
BseGI GGATG 9 cut(s) 15, 122, 209, 760, 784, 903, 1607, 1655, 1957
BseJI GATNNNNATC 2 cut(s) 471, 1235
BseLI CCNNNNNNNGG 5 cut(s) 61, 288, 751, 775, 1452
BseMI GCAATG 2 cut(s) 1356, 2372
BseMII CTCAG 6 cut(s) 471, 649, 811, 2082, 2184, 2496
BseNI ACTGG 6 cut(s) 8, 63, 169, 656, 1524, 1625
BseRI GAGGAG 2 cut(s) 232, 1313
BseSI GKGCMC 3 cut(s) 1669, 1910, 2000
BseX3I CGGCCG 1 cut(s) 2333
BseXI GCAGC 5 cut(s) 651, 1348, 1522, 2279, 2389
BseYI CCCAGC 2 cut(s) 364, 551
BsgI GTGCAG 2 cut(s) 2395, 2412
Bsh1236I CGCG 2 cut(s) 207, 1875
Bsh1285I CGRYCG 1 cut(s) 2336
BshFI GGCC 5 cut(s) 65, 336, 2149, 2201, 2335
BshNI GGYRCC 3 cut(s) 251, 1664, 1907
BshVI ATCGAT 1 cut(s) 316
BsiEI CGRYCG 1 cut(s) 2336
BsiHKAI GWGCWC 2 cut(s) 492, 1937
BsiHKCI CYCGRG 1 cut(s) 244
BsiSI CCGG 8 cut(s) 66, 126, 332, 735, 745, 944, 1021, 2063
BsiWI CGTACG 1 cut(s) 256
BslFI GGGAC 2 cut(s) 1256, 1768
BslI CCNNNNNNNGG 5 cut(s) 61, 288, 751, 775, 1452
BsmAI GTCTC 4 cut(s) 405, 476, 1107, 1295
BsmBI CGTCTC 1 cut(s) 476
BsmFI GGGAC 2 cut(s) 1256, 1768
BsnI GGCC 5 cut(s) 65, 336, 2149, 2201, 2335
BsoBI CYCGRG 1 cut(s) 244
Bsp1286I GDGCHC 5 cut(s) 492, 1669, 1910, 1937, 2000
Bsp1407I TGTACA 1 cut(s) 1593
BspACI CCGC 5 cut(s) 705, 1014, 1873, 1875, 2074
BspANI GGCC 5 cut(s) 65, 336, 2149, 2201, 2335
BspCNI CTCAG 6 cut(s) 472, 648, 810, 2083, 2185, 2497
BspDI ATCGAT 1 cut(s) 316
BspFNI CGCG 2 cut(s) 207, 1875
BspLI GGNNCC 5 cut(s) 253, 1666, 1792, 1909, 2061
BspMI ACCTGC 1 cut(s) 2170
BspPI GGATC 4 cut(s) 523, 1238, 1468, 2237
BspQI GCTCTTC 2 cut(s) 1925, 2163
BspT107I GGYRCC 3 cut(s) 251, 1664, 1907
BsrBI CCGCTC 1 cut(s) 1014
BsrDI GCAATG 2 cut(s) 1356, 2372
BsrFI RCCGGY 2 cut(s) 65, 734
BsrGI TGTACA 1 cut(s) 1593
BsrI ACTGG 6 cut(s) 8, 63, 169, 656, 1524, 1625
BssAI RCCGGY 2 cut(s) 65, 734
BssECI CCNNGG 8 cut(s) 723, 1138, 1396, 1659, 1660, 1786, 1873, 1992
BssSI CACGAG 1 cut(s) 1670
BssT1I CCWWGG 2 cut(s) 723, 1992
Bst2BI CACGAG 1 cut(s) 1670
Bst2UI CCWGG 4 cut(s) 934, 1140, 1661, 2189
Bst4CI ACNGT 8 cut(s) 116, 256, 276, 487, 823, 1895, 1922, 2032
Bst6I CTCTTC 4 cut(s) 438, 1145, 1925, 2163
BstAUI TGTACA 1 cut(s) 1593
BstC8I GCNNGC 4 cut(s) 1873, 2151, 2163, 2312
BstDEI CTNAG 8 cut(s) 480, 635, 797, 1431, 1765, 2091, 2193, 2505
BstDSI CCRYGG 2 cut(s) 1786, 1873
BstF5I GGATG 9 cut(s) 15, 122, 209, 760, 784, 903, 1607, 1655, 1957
BstFNI CGCG 2 cut(s) 207, 1875
BstH2I RGCGCY 1 cut(s) 381
BstHHI GCGC 2 cut(s) 209, 380
BstMAI GTCTC 4 cut(s) 405, 476, 1107, 1295
BstMCI CGRYCG 1 cut(s) 2336
BstMWI GCNNNNNNNGC 6 cut(s) 215, 224, 1872, 2150, 2198, 2383
BstNI CCWGG 4 cut(s) 934, 1140, 1661, 2189
BstNSI RCATGY 2 cut(s) 2011, 2314
BstSCI CCNGG 6 cut(s) 331, 932, 1138, 1659, 2061, 2187
BstSFI CTRYAG 2 cut(s) 192, 677
BstSLI GKGCMC 3 cut(s) 1669, 1910, 2000
BstUI CGCG 2 cut(s) 207, 1875
BstV1I GCAGC 5 cut(s) 651, 1348, 1522, 2279, 2389
BstV2I GAAGAC 2 cut(s) 418, 735
BstX2I RGATCY 1 cut(s) 528
BstXI CCANNNNNNTGG 1 cut(s) 1194
BstYI RGATCY 1 cut(s) 528
BstZI CGGCCG 1 cut(s) 2333
Bsu15I ATCGAT 1 cut(s) 316
BsuI GTATCC 2 cut(s) 1092, 1192
BsuRI GGCC 5 cut(s) 65, 336, 2149, 2201, 2335
BsuTUI ATCGAT 1 cut(s) 316
BtgI CCRYGG 2 cut(s) 1786, 1873
BtrI CACGTC 1 cut(s) 2104
BtsCI GGATG 9 cut(s) 15, 122, 209, 760, 784, 903, 1607, 1655, 1957
BtsI GCAGTG 2 cut(s) 2160, 2393
BtsIMutI CAGTG 8 cut(s) 145, 805, 1437, 1517, 1900, 2160, 2393, 2412
BveI ACCTGC 1 cut(s) 2170
Cac8I GCNNGC 4 cut(s) 1873, 2151, 2163, 2312
CfoI GCGC 2 cut(s) 209, 380
Cfr10I RCCGGY 2 cut(s) 65, 734
Cfr13I GGNCC 3 cut(s) 334, 2059, 2199
Cfr42I CCGCGG 1 cut(s) 1876
ClaI ATCGAT 1 cut(s) 316
CsiI ACCWGGT 1 cut(s) 932
CspCI CAANNNNNGTGG 1 cut(s) 2503
CviAII CATG 6 cut(s) 1129, 1471, 2008, 2311, 2315, 2341
DdeI CTNAG 8 cut(s) 480, 635, 797, 1431, 1765, 2091, 2193, 2505
DraIII CACNNNGTG 1 cut(s) 2117
DrdI GACNNNNNNGTC 2 cut(s) 2008, 2095
DseDI GACNNNNNNGTC 2 cut(s) 2008, 2095
EaeI YGGCCR 2 cut(s) 63, 2333
EagI CGGCCG 1 cut(s) 2333
Eam1104I CTCTTC 4 cut(s) 438, 1145, 1925, 2163
EarI CTCTTC 4 cut(s) 438, 1145, 1925, 2163
EciI GGCGGA 1 cut(s) 720
EclXI CGGCCG 1 cut(s) 2333
Eco130I CCWWGG 2 cut(s) 723, 1992
Eco32I GATATC 1 cut(s) 172
Eco47I GGWCC 1 cut(s) 2059
Eco52I CGGCCG 1 cut(s) 2333
Eco57I CTGAAG 4 cut(s) 1835, 2195, 2366, 2436
Eco88I CYCGRG 1 cut(s) 244
EcoRI GAATTC 1 cut(s) 305
EcoRII CCWGG 4 cut(s) 932, 1138, 1659, 2187
EcoRV GATATC 1 cut(s) 172
EcoT14I CCWWGG 2 cut(s) 723, 1992
EcoT22I ATGCAT 2 cut(s) 1219, 2316
ErhI CCWWGG 2 cut(s) 723, 1992
Esp3I CGTCTC 1 cut(s) 476
FaeI CATG 6 cut(s) 1132, 1474, 2011, 2314, 2318, 2344
FalI AAGNNNNNCTT 2 cut(s) 280, 312
FaqI GGGAC 2 cut(s) 1256, 1768
FatI CATG 6 cut(s) 1128, 1470, 2007, 2310, 2314, 2340
FauI CCCGC 2 cut(s) 1868, 1880
FauNDI CATATG 1 cut(s) 565
FbaI TGATCA 2 cut(s) 781, 2230
FblI GTMKAC 1 cut(s) 948
Fnu4HI GCNGC 5 cut(s) 640, 1362, 1536, 2268, 2378
FokI GGATG 9 cut(s) 2, 109, 196, 767, 791, 910, 1614, 1642, 1964
Fsp4HI GCNGC 5 cut(s) 640, 1362, 1536, 2268, 2378
FspBI CTAG 1 cut(s) 1190
GlaI GCGC 2 cut(s) 208, 379
GluI GCNGC 5 cut(s) 640, 1362, 1536, 2268, 2378
GsaI CCCAGC 2 cut(s) 368, 555
GsuI CTGGAG 4 cut(s) 186, 1429, 1596, 1608
HaeII RGCGCY 1 cut(s) 381
HaeIII GGCC 5 cut(s) 65, 336, 2149, 2201, 2335
HapII CCGG 8 cut(s) 66, 126, 332, 735, 745, 944, 1021, 2063
HhaI GCGC 2 cut(s) 209, 380
Hin1II CATG 6 cut(s) 1132, 1474, 2011, 2314, 2318, 2344
Hin6I GCGC 2 cut(s) 207, 378
HinP1I GCGC 2 cut(s) 207, 378
HincII GTYRAC 2 cut(s) 1159, 1467
HindII GTYRAC 2 cut(s) 1159, 1467
HindIII AAGCTT 2 cut(s) 182, 216
HpaI GTTAAC 1 cut(s) 1159
HpaII CCGG 8 cut(s) 66, 126, 332, 735, 745, 944, 1021, 2063
HphI GGTGA 7 cut(s) 97, 922, 1476, 1766, 2047, 2194, 2281
Hpy166II GTNNAC 8 cut(s) 874, 949, 1159, 1467, 1594, 1771, 2107, 2289
Hpy188III TCNNGA 5 cut(s) 153, 246, 1690, 1799, 2057
Hpy8I GTNNAC 8 cut(s) 874, 949, 1159, 1467, 1594, 1771, 2107, 2289
HpyAV CCTTC 6 cut(s) 1503, 1604, 1805, 1897, 2390, 2411
HpyCH4III ACNGT 8 cut(s) 116, 256, 276, 487, 823, 1895, 1922, 2032
HpyCH4IV ACGT 6 cut(s) 510, 699, 1025, 1590, 2083, 2103
HpyF10VI GCNNNNNNNGC 6 cut(s) 215, 224, 1872, 2150, 2198, 2383
HpyF3I CTNAG 8 cut(s) 480, 635, 797, 1431, 1765, 2091, 2193, 2505
HpySE526I ACGT 6 cut(s) 510, 699, 1025, 1590, 2083, 2103
Hsp92II CATG 6 cut(s) 1132, 1474, 2011, 2314, 2318, 2344
HspAI GCGC 2 cut(s) 207, 378
KpnI GGTACC 1 cut(s) 255
Ksp22I TGATCA 2 cut(s) 781, 2230
KspAI GTTAAC 1 cut(s) 1159
KspI CCGCGG 1 cut(s) 1876
LguI GCTCTTC 2 cut(s) 1925, 2163
LmnI GCTCC 2 cut(s) 1064, 1571
Lsp1109I GCAGC 5 cut(s) 651, 1348, 1522, 2279, 2389
LweI GCATC 8 cut(s) 218, 457, 588, 672, 745, 1204, 1683, 2148
MabI ACCWGGT 1 cut(s) 932
MaeI CTAG 1 cut(s) 1190
MaeII ACGT 6 cut(s) 510, 699, 1025, 1590, 2083, 2103
MaeIII GTNAC 6 cut(s) 128, 140, 1482, 1508, 1618, 1799
MbiI CCGCTC 1 cut(s) 1014
MboII GAAGA 9 cut(s) 418, 425, 740, 797, 1162, 1231, 1942, 2180, 2491
MflI RGATCY 1 cut(s) 528
MhlI GDGCHC 5 cut(s) 492, 1669, 1910, 1937, 2000
MlyI GAGTC 7 cut(s) 789, 944, 1004, 1436, 1490, 1626, 1661
MmeI TCCRAC 1 cut(s) 79
Mph1103I ATGCAT 2 cut(s) 1219, 2316
MroXI GAANNNNTTC 1 cut(s) 2285
MseI TTAA 8 cut(s) 111, 447, 534, 1158, 1677, 2252, 2478, 2511
MslI CAYNNNNRTG 7 cut(s) 984, 1382, 1896, 1923, 2033, 2217, 2319
MspA1I CMGCKG 1 cut(s) 1875
MspI CCGG 8 cut(s) 66, 126, 332, 735, 745, 944, 1021, 2063
MspR9I CCNGG 6 cut(s) 333, 934, 1140, 1661, 2063, 2189
MvaI CCWGG 4 cut(s) 934, 1140, 1661, 2189
MvnI CGCG 2 cut(s) 207, 1875
MwoI GCNNNNNNNGC 6 cut(s) 215, 224, 1872, 2150, 2198, 2383
NciI CCSGG 2 cut(s) 333, 2063
NdeI CATATG 1 cut(s) 565
NlaIII CATG 6 cut(s) 1132, 1474, 2011, 2314, 2318, 2344
NlaIV GGNNCC 5 cut(s) 253, 1666, 1792, 1909, 2061
NmeAIII GCCGAG 2 cut(s) 406, 2296
NmuCI GTSAC 5 cut(s) 128, 140, 1482, 1618, 1799
NsiI ATGCAT 2 cut(s) 1219, 2316
NspI RCATGY 2 cut(s) 2011, 2314
OliI CACNNNNGTG 2 cut(s) 1896, 2033
PaeI GCATGC 1 cut(s) 2314
PaeR7I CTCGAG 1 cut(s) 244
PaqCI CACCTGC 1 cut(s) 2170
PasI CCCWGGG 1 cut(s) 1660
PciI ACATGT 1 cut(s) 2007
PciSI GCTCTTC 2 cut(s) 1925, 2163
PcsI WCGNNNNNNNCGW 1 cut(s) 242
PdmI GAANNNNTTC 1 cut(s) 2285
PfeI GAWTC 3 cut(s) 149, 693, 2471
Pfl23II CGTACG 1 cut(s) 256
PflFI GACNNNGTC 1 cut(s) 2082
PflMI CCANNNNNTGG 1 cut(s) 61
PkrI GCNGC 5 cut(s) 641, 1363, 1537, 2269, 2379
PleI GAGTC 7 cut(s) 789, 944, 1003, 1436, 1489, 1625, 1660
PpsI GAGTC 7 cut(s) 789, 944, 1003, 1436, 1489, 1625, 1660
PscI ACATGT 1 cut(s) 2007
PsiI TTATAA 1 cut(s) 1031
Psp1406I AACGTT 2 cut(s) 510, 699
Psp6I CCWGG 4 cut(s) 932, 1138, 1659, 2187
PspFI CCCAGC 2 cut(s) 364, 551
PspGI CCWGG 4 cut(s) 932, 1138, 1659, 2187
PspLI CGTACG 1 cut(s) 256
PspN4I GGNNCC 5 cut(s) 253, 1666, 1792, 1909, 2061
PspPI GGNCC 3 cut(s) 334, 2059, 2199
PsuI RGATCY 1 cut(s) 528
PsyI GACNNNGTC 1 cut(s) 2082
RseI CAYNNNNRTG 7 cut(s) 984, 1382, 1896, 1923, 2033, 2217, 2319
SacII CCGCGG 1 cut(s) 1876
SapI GCTCTTC 2 cut(s) 1925, 2163
SaqAI TTAA 8 cut(s) 111, 447, 534, 1158, 1677, 2252, 2478, 2511
SatI GCNGC 5 cut(s) 640, 1362, 1536, 2268, 2378
Sau96I GGNCC 3 cut(s) 334, 2059, 2199
ScaI AGTACT 1 cut(s) 2069
SchI GAGTC 7 cut(s) 789, 944, 1004, 1436, 1490, 1626, 1661
ScrFI CCNGG 6 cut(s) 333, 934, 1140, 1661, 2063, 2189
SduI GDGCHC 5 cut(s) 492, 1669, 1910, 1937, 2000
SexAI ACCWGGT 1 cut(s) 932
SfaNI GCATC 8 cut(s) 218, 457, 588, 672, 745, 1204, 1683, 2148
SfcI CTRYAG 2 cut(s) 192, 677
Sfr274I CTCGAG 1 cut(s) 244
Sfr303I CCGCGG 1 cut(s) 1876
SgrBI CCGCGG 1 cut(s) 1876
SinI GGWCC 1 cut(s) 2059
SlaI CTCGAG 1 cut(s) 244
SmiMI CAYNNNNRTG 7 cut(s) 984, 1382, 1896, 1923, 2033, 2217, 2319
SmlI CTYRAG 1 cut(s) 244
SmoI CTYRAG 1 cut(s) 244
SphI GCATGC 1 cut(s) 2314
SsiI CCGC 5 cut(s) 705, 1014, 1873, 1875, 2074
SspMI CTAG 1 cut(s) 1190
StyD4I CCNGG 6 cut(s) 331, 932, 1138, 1659, 2061, 2187
StyI CCWWGG 2 cut(s) 723, 1992
TaaI ACNGT 8 cut(s) 116, 256, 276, 487, 823, 1895, 1922, 2032
TaiI ACGT 6 cut(s) 513, 702, 1028, 1593, 2086, 2106
TaqI TCGA 7 cut(s) 154, 245, 316, 596, 1233, 1608, 1689
TaqII GACCGA 1 cut(s) 876
TatI WGTACW 9 cut(s) 42, 503, 788, 852, 1202, 1345, 1593, 2067, 2106
TfiI GAWTC 3 cut(s) 149, 693, 2471
Tru1I TTAA 8 cut(s) 111, 447, 534, 1158, 1677, 2252, 2478, 2511
Tru9I TTAA 8 cut(s) 111, 447, 534, 1158, 1677, 2252, 2478, 2511
TscAI CASTG 8 cut(s) 145, 805, 1444, 1524, 1900, 2160, 2393, 2419
TseFI GTSAC 5 cut(s) 128, 140, 1482, 1618, 1799
TseI GCWGC 5 cut(s) 639, 1361, 1535, 2267, 2377
Tsp45I GTSAC 5 cut(s) 128, 140, 1482, 1618, 1799
TspDTI ATGAA 7 cut(s) 17, 334, 360, 562, 914, 1238, 1552
TspGWI ACGGA 2 cut(s) 385, 1697
TspRI CASTG 8 cut(s) 145, 805, 1444, 1524, 1900, 2160, 2393, 2419
Tth111I GACNNNGTC 1 cut(s) 2082
Van91I CCANNNNNTGG 1 cut(s) 61
VpaK11BI GGWCC 1 cut(s) 2059
XapI RAATTY 3 cut(s) 305, 497, 833
XceI RCATGY 2 cut(s) 2011, 2314
XcmI CCANNNNNNNNNTGG 1 cut(s) 1833
XhoI CTCGAG 1 cut(s) 244
XmiI GTMKAC 1 cut(s) 948
XmnI GAANNNNTTC 1 cut(s) 2285
XspI CTAG 1 cut(s) 1190
ZrmI AGTACT 1 cut(s) 2069
Zsp2I ATGCAT 2 cut(s) 1219, 2316
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.