MD17G1125900.v1.1

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0000097
Physical Location & Seq
Reverse (-)
11057977 .. 11059779
1803 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1125900.v1.1.491

Sequence Viewer

Length: 1431 bp
ATGGTTTCTATAGGAGAAGCTAATCAGCCTCATGCTGTTTGTATTCCGGTTCCGGCACAAGGTCATATAAAGGCAATGCTTCAATTATCAAAACTTCTCCACCATAAAGGTTTTCGTATAACCTATGTCAACACCGAGTTCAATCACAGGCGCTTTCTTAAATCTCTAGCACCCGACTCCCTTGACGGCTTGCCTGATGATTTTCAGTTTGAAACTATCCCAGATGGCCTTCCGGATAGAGATGACGATTCCACCCAAGACTTCAATTTGCTTGCTGATTCTGTCAAAAACAATTTCTTGGCACCTTTTCTTGACCTCATAAAGAAACTCAACCGTAGTACCCCTCCAGTTACTCTCATTGTTTCAGATGGTTTCATGCATTTCACAACCACTGCAGCTCAACAACTTGGCATTCCCATTACACTCTTCTTTACTTTTTCAGCAAGCAGCTCTATGGGCTATATGAAATATCCTGCTTTGGTGGAAAGAGGACTTGCACCACTCAAAGATGAGAGCAGTTTCACGAACGGCTTTTTAGACCAGATAATAGATTGGATTCCAGGAATGAAACATATCCGTTTAAGGGATCTCCCCAACAACTTTGTGACAACAAATCCCAATGACAAAATTTTTAACAACATCCTTGAAGTAATGAGTAGAGTTCATGAAGCTTCAGCAATTATTGTACATACCTTTGATGCACTGGAGCAAGATGTTTTGGATGCCCTCTCAAGTATGTATCCACCTGTTTACGCCATTGGCCCTCTCCCGTTACTTCTCAATCAGATGCCACAACATCCTTTGAAGTCCTTGGGATACAGTCTGTGGAGAGAAGAAGCTGAGTGTCTCTCCTGGCTGGACGATAAGAAGCCAAACTCAGTTGTTTATGTGAATTTCGGCAGCATAACGGTCATGACACCGGAACAACTTGTGGAGTTTGGTTGGGGACTTGCAAAGAGCAAGCTTACTTTCTTCTGGGTAATTAGGCCTGACTTGGTAATTGGTAAATCAGCAATTTTTCCATCTGAGTTTGTGGATGAAACTAAAGGAAGAAGTCTAATAGCGAGTTGGTGCCCTCAAGAGCAAGTCCTTAACCACCCATCAGTTGGAGGATTTTTGACACACAGCGGTTGGAATTCGACAATGGAAAGTGTGTCTGCAGGAGTGCCCATGTTGTGTTGGCCTTTCTTTGCTGATCAGCAAACAAATTGTCACTGTACTTGCAAAGAATGGGGCATTGGTACGGAGATTGATAAAAATGTGAAGCGAGATGAAGTGGAGAAGCTTGTTAGAGAGCTGATGCAAGGAGAGAAGGGCAAGAGAATGAAGCATGAGGCCATGGAGTGGAAGAAATTGGCAGAGGAAGCCACTGGTCCACACGGTTCTTCATCTGCAAACTTAGAAAAATTAGTGAATCAATTTCAATTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

477

Amino Acids

53.48

Weight (kDa)

5.61

Isoelectric Point (pI)

37.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 13 - 178 4.5e-07 Glycosyltransferase, N-terminal domain
UDPGT PF00201 289 - 440 2.4e-25 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 301, 1071
AccB7I CCANNNNNTGG 2 cut(s) 1106, 1344
AccIII TCCGGA 1 cut(s) 232
AciI CCGC 1 cut(s) 1128
AclWI GGATC 1 cut(s) 594
AcsI RAATTY 3 cut(s) 627, 892, 1135
AcuI CTGAAG 1 cut(s) 657
AfaI GTAC 4 cut(s) 340, 687, 1219, 1243
AfiI CCNNNNNNNGG 4 cut(s) 59, 583, 1106, 1344
AgsI TTSAA 7 cut(s) 83, 142, 212, 265, 647, 805, 1424
AjnI CCWGG 2 cut(s) 559, 851
AjuI GAANNNNNNNTTGG 2 cut(s) 1221, 1253
AluBI AGCT 8 cut(s) 20, 398, 450, 671, 839, 964, 1285, 1297
AluI AGCT 8 cut(s) 20, 398, 450, 671, 839, 964, 1285, 1297
Alw26I GTCTC 1 cut(s) 851
AlwI GGATC 1 cut(s) 594
Aor13HI TCCGGA 1 cut(s) 232
AoxI GGCC 5 cut(s) 226, 760, 986, 1181, 1335
ApeKI GCWGC 3 cut(s) 395, 447, 900
ApoI RAATTY 3 cut(s) 627, 892, 1135
ArsI GACNNNNNNTTYG 2 cut(s) 1195, 1227
AspLEI GCGC 1 cut(s) 153
AspS9I GGNCC 2 cut(s) 761, 1373
AvaII GGWCC 1 cut(s) 1373
BaeGI GKGCMC 2 cut(s) 1076, 1170
BaeI ACNNNNGTAYC 2 cut(s) 322, 355
BanI GGYRCC 2 cut(s) 301, 1071
BbvI GCAGC 3 cut(s) 407, 459, 912
BccI CCATC 4 cut(s) 218, 362, 1030, 1108
BceAI ACGGC 2 cut(s) 202, 544
BciT130I CCWGG 2 cut(s) 561, 853
BciVI GTATCC 2 cut(s) 750, 809
BclI TGATCA 1 cut(s) 1195
BcoDI GTCTC 1 cut(s) 851
BfaI CTAG 1 cut(s) 167
BfmI CTRYAG 3 cut(s) 9, 393, 1158
BfoI RGCGCY 1 cut(s) 154
BfuI GTATCC 2 cut(s) 750, 809
BisI GCNGC 3 cut(s) 396, 448, 901
BlsI GCNGC 3 cut(s) 397, 449, 902
Bme1390I CCNGG 2 cut(s) 561, 853
Bme18I GGWCC 1 cut(s) 1373
BmgT120I GGNCC 2 cut(s) 761, 1373
BmiI GGNNCC 3 cut(s) 51, 303, 1073
BmrFI CCNGG 2 cut(s) 561, 853
BmsI GCATC 4 cut(s) 688, 712, 777, 1290
BplI GAGNNNNNCTC 2 cut(s) 833, 865
BpmI CTGGAG 2 cut(s) 330, 725
BpuEI CTTGAG 2 cut(s) 715, 1062
BsaJI CCNNGG 2 cut(s) 810, 1338
BsaWI WCCGGW 3 cut(s) 46, 232, 919
Bsc4I CCNNNNNNNGG 4 cut(s) 59, 583, 1106, 1344
Bse1I ACTGG 3 cut(s) 347, 708, 1375
Bse3DI GCAATG 1 cut(s) 81
BseAI TCCGGA 1 cut(s) 232
BseBI CCWGG 2 cut(s) 561, 853
BseDI CCNNGG 2 cut(s) 810, 1338
BseGI GGATG 4 cut(s) 639, 727, 796, 1042
BseLI CCNNNNNNNGG 4 cut(s) 59, 583, 1106, 1344
BseMI GCAATG 1 cut(s) 81
BseMII CTCAG 3 cut(s) 831, 891, 1017
BseNI ACTGG 3 cut(s) 347, 708, 1375
BseSI GKGCMC 2 cut(s) 1076, 1170
BseXI GCAGC 3 cut(s) 407, 459, 912
BshFI GGCC 5 cut(s) 228, 762, 988, 1183, 1337
BshNI GGYRCC 2 cut(s) 301, 1071
BsiSI CCGG 4 cut(s) 47, 53, 233, 920
BslFI GGGAC 1 cut(s) 960
BslI CCNNNNNNNGG 4 cut(s) 59, 583, 1106, 1344
BsmAI GTCTC 1 cut(s) 851
BsmFI GGGAC 1 cut(s) 960
BsmI GAATGC 1 cut(s) 411
BsnI GGCC 5 cut(s) 228, 762, 988, 1183, 1337
Bsp1286I GDGCHC 2 cut(s) 1076, 1170
Bsp13I TCCGGA 1 cut(s) 232
Bsp1407I TGTACA 1 cut(s) 685
Bsp143I GATC 2 cut(s) 586, 1195
Bsp19I CCATGG 1 cut(s) 1338
BspACI CCGC 1 cut(s) 1128
BspANI GGCC 5 cut(s) 228, 762, 988, 1183, 1337
BspCNI CTCAG 3 cut(s) 832, 890, 1018
BspEI TCCGGA 1 cut(s) 232
BspHI TCATGA 2 cut(s) 664, 912
BspLI GGNNCC 3 cut(s) 51, 303, 1073
BspMAI CTGCAG 2 cut(s) 397, 1162
BspPI GGATC 1 cut(s) 594
BspT107I GGYRCC 2 cut(s) 301, 1071
BsrDI GCAATG 1 cut(s) 81
BsrGI TGTACA 1 cut(s) 685
BsrI ACTGG 3 cut(s) 347, 708, 1375
BssECI CCNNGG 2 cut(s) 810, 1338
BssMI GATC 2 cut(s) 586, 1195
BssT1I CCWWGG 2 cut(s) 810, 1338
Bst2UI CCWGG 2 cut(s) 561, 853
Bst4CI ACNGT 5 cut(s) 335, 821, 910, 1217, 1382
Bst6I CTCTTC 1 cut(s) 431
BstAUI TGTACA 1 cut(s) 685
BstC8I GCNNGC 4 cut(s) 191, 273, 445, 962
BstDEI CTNAG 4 cut(s) 840, 877, 1026, 1399
BstDSI CCRYGG 1 cut(s) 1338
BstF5I GGATG 4 cut(s) 639, 727, 796, 1042
BstH2I RGCGCY 1 cut(s) 154
BstHHI GCGC 1 cut(s) 153
BstKTI GATC 2 cut(s) 589, 1198
BstMAI GTCTC 1 cut(s) 851
BstMBI GATC 2 cut(s) 586, 1195
BstMWI GCNNNNNNNGC 2 cut(s) 456, 1364
BstNI CCWGG 2 cut(s) 561, 853
BstSCI CCNGG 2 cut(s) 559, 851
BstSFI CTRYAG 3 cut(s) 9, 393, 1158
BstSLI GKGCMC 2 cut(s) 1076, 1170
BstV1I GCAGC 3 cut(s) 407, 459, 912
BstX2I RGATCY 1 cut(s) 586
BstYI RGATCY 1 cut(s) 586
BsuI GTATCC 2 cut(s) 750, 809
BsuRI GGCC 5 cut(s) 228, 762, 988, 1183, 1337
BtgI CCRYGG 1 cut(s) 1338
BtsCI GGATG 4 cut(s) 639, 727, 796, 1042
BtsI GCAGTG 1 cut(s) 390
BtsIMutI CAGTG 4 cut(s) 390, 701, 1213, 1368
Cac8I GCNNGC 4 cut(s) 191, 273, 445, 962
CciI TCATGA 2 cut(s) 664, 912
CfoI GCGC 1 cut(s) 153
Cfr13I GGNCC 2 cut(s) 761, 1373
Csp6I GTAC 4 cut(s) 339, 686, 1218, 1242
CviAII CATG 7 cut(s) 32, 376, 665, 913, 1171, 1331, 1339
CviQI GTAC 4 cut(s) 339, 686, 1218, 1242
DdeI CTNAG 4 cut(s) 840, 877, 1026, 1399
DpnI GATC 2 cut(s) 588, 1197
DpnII GATC 2 cut(s) 586, 1195
Eam1104I CTCTTC 1 cut(s) 431
EarI CTCTTC 1 cut(s) 431
Eco130I CCWWGG 2 cut(s) 810, 1338
Eco147I AGGCCT 1 cut(s) 988
Eco47I GGWCC 1 cut(s) 1373
Eco57I CTGAAG 1 cut(s) 657
EcoRI GAATTC 1 cut(s) 1135
EcoRII CCWGG 2 cut(s) 559, 851
EcoT14I CCWWGG 2 cut(s) 810, 1338
EcoT22I ATGCAT 1 cut(s) 381
ErhI CCWWGG 2 cut(s) 810, 1338
FaeI CATG 7 cut(s) 35, 379, 668, 916, 1174, 1334, 1342
FaqI GGGAC 1 cut(s) 960
FatI CATG 7 cut(s) 31, 375, 664, 912, 1170, 1330, 1338
FbaI TGATCA 1 cut(s) 1195
Fnu4HI GCNGC 3 cut(s) 396, 448, 901
FokI GGATG 4 cut(s) 626, 734, 783, 1049
Fsp4HI GCNGC 3 cut(s) 396, 448, 901
FspBI CTAG 1 cut(s) 167
GlaI GCGC 1 cut(s) 152
GluI GCNGC 3 cut(s) 396, 448, 901
GsuI CTGGAG 2 cut(s) 330, 725
HaeII RGCGCY 1 cut(s) 154
HaeIII GGCC 5 cut(s) 228, 762, 988, 1183, 1337
HapII CCGG 4 cut(s) 47, 53, 233, 920
HhaI GCGC 1 cut(s) 153
Hin1II CATG 7 cut(s) 35, 379, 668, 916, 1174, 1334, 1342
Hin6I GCGC 1 cut(s) 151
HinP1I GCGC 1 cut(s) 151
HincII GTYRAC 1 cut(s) 130
HindII GTYRAC 1 cut(s) 130
HindIII AAGCTT 3 cut(s) 669, 962, 1283
HinfI GANTC 5 cut(s) 176, 248, 278, 556, 1414
HpaII CCGG 4 cut(s) 47, 53, 233, 920
Hpy166II GTNNAC 3 cut(s) 130, 751, 1376
Hpy188I TCNGA 3 cut(s) 367, 786, 1027
Hpy188III TCNNGA 6 cut(s) 233, 311, 523, 665, 913, 1079
Hpy8I GTNNAC 3 cut(s) 130, 751, 1376
HpyAV CCTTC 2 cut(s) 239, 1306
HpyCH4III ACNGT 5 cut(s) 335, 821, 910, 1217, 1382
HpyCH4V TGCA 9 cut(s) 379, 395, 497, 701, 953, 1160, 1224, 1303, 1394
HpyF10VI GCNNNNNNNGC 2 cut(s) 456, 1364
HpyF3I CTNAG 4 cut(s) 840, 877, 1026, 1399
Hsp92II CATG 7 cut(s) 35, 379, 668, 916, 1174, 1334, 1342
HspAI GCGC 1 cut(s) 151
Kpn2I TCCGGA 1 cut(s) 232
Ksp22I TGATCA 1 cut(s) 1195
Kzo9I GATC 2 cut(s) 586, 1195
LmnI GCTCC 1 cut(s) 706
Lsp1109I GCAGC 3 cut(s) 407, 459, 912
LweI GCATC 4 cut(s) 688, 712, 777, 1290
MaeI CTAG 1 cut(s) 167
MaeIII GTNAC 4 cut(s) 349, 604, 771, 1211
MalI GATC 2 cut(s) 588, 1197
MboI GATC 2 cut(s) 586, 1195
MboII GAAGA 6 cut(s) 418, 845, 964, 1062, 1360, 1377
MfeI CAATTG 1 cut(s) 1424
MflI RGATCY 1 cut(s) 586
MhlI GDGCHC 2 cut(s) 1076, 1170
MlyI GAGTC 1 cut(s) 170
MmeI TCCRAC 2 cut(s) 1087, 1112
Mph1103I ATGCAT 1 cut(s) 381
MroI TCCGGA 1 cut(s) 232
MseI TTAA 4 cut(s) 159, 581, 633, 1092
MspA1I CMGCKG 1 cut(s) 1128
MspI CCGG 4 cut(s) 47, 53, 233, 920
MspR9I CCNGG 2 cut(s) 561, 853
MunI CAATTG 1 cut(s) 1424
Mva1269I GAATGC 1 cut(s) 411
MvaI CCWGG 2 cut(s) 561, 853
MwoI GCNNNNNNNGC 2 cut(s) 456, 1364
NcoI CCATGG 1 cut(s) 1338
NdeII GATC 2 cut(s) 586, 1195
NlaIII CATG 7 cut(s) 35, 379, 668, 916, 1174, 1334, 1342
NlaIV GGNNCC 3 cut(s) 51, 303, 1073
NmuCI GTSAC 2 cut(s) 604, 1211
NsiI ATGCAT 1 cut(s) 381
PagI TCATGA 2 cut(s) 664, 912
PceI AGGCCT 1 cut(s) 988
PctI GAATGC 1 cut(s) 411
PfeI GAWTC 4 cut(s) 248, 278, 556, 1414
PflMI CCANNNNNTGG 2 cut(s) 1106, 1344
PfoI TCCNGGA 1 cut(s) 559
PkrI GCNGC 3 cut(s) 397, 449, 902
PleI GAGTC 1 cut(s) 170
PpsI GAGTC 1 cut(s) 170
Psp6I CCWGG 2 cut(s) 559, 851
PspGI CCWGG 2 cut(s) 559, 851
PspN4I GGNNCC 3 cut(s) 51, 303, 1073
PspPI GGNCC 2 cut(s) 761, 1373
PstI CTGCAG 2 cut(s) 397, 1162
PsuI RGATCY 1 cut(s) 586
RsaI GTAC 4 cut(s) 340, 687, 1219, 1243
RsaNI GTAC 4 cut(s) 339, 686, 1218, 1242
SaqAI TTAA 4 cut(s) 159, 581, 633, 1092
SatI GCNGC 3 cut(s) 396, 448, 901
Sau3AI GATC 2 cut(s) 586, 1195
Sau96I GGNCC 2 cut(s) 761, 1373
SchI GAGTC 1 cut(s) 170
ScrFI CCNGG 2 cut(s) 561, 853
SduI GDGCHC 2 cut(s) 1076, 1170
SfaNI GCATC 4 cut(s) 688, 712, 777, 1290
SfcI CTRYAG 3 cut(s) 9, 393, 1158
SinI GGWCC 1 cut(s) 1373
SmlI CTYRAG 2 cut(s) 730, 1077
SmoI CTYRAG 2 cut(s) 730, 1077
SseBI AGGCCT 1 cut(s) 988
SsiI CCGC 1 cut(s) 1128
SspMI CTAG 1 cut(s) 167
StuI AGGCCT 1 cut(s) 988
StyD4I CCNGG 2 cut(s) 559, 851
StyI CCWWGG 2 cut(s) 810, 1338
TaaI ACNGT 5 cut(s) 335, 821, 910, 1217, 1382
TaqI TCGA 1 cut(s) 1139
TatI WGTACW 2 cut(s) 685, 1217
TfiI GAWTC 4 cut(s) 248, 278, 556, 1414
Tru1I TTAA 4 cut(s) 159, 581, 633, 1092
Tru9I TTAA 4 cut(s) 159, 581, 633, 1092
TscAI CASTG 4 cut(s) 397, 708, 1220, 1375
TseFI GTSAC 2 cut(s) 604, 1211
TseI GCWGC 3 cut(s) 395, 447, 900
Tsp45I GTSAC 2 cut(s) 604, 1211
TspDTI ATGAA 9 cut(s) 364, 479, 581, 653, 681, 1053, 1287, 1340, 1377
TspGWI ACGGA 2 cut(s) 566, 1259
TspRI CASTG 4 cut(s) 397, 708, 1220, 1375
Van91I CCANNNNNTGG 2 cut(s) 1106, 1344
VpaK11BI GGWCC 1 cut(s) 1373
XapI RAATTY 3 cut(s) 627, 892, 1135
XcmI CCANNNNNNNNNTGG 1 cut(s) 1103
XspI CTAG 1 cut(s) 167
Zsp2I ATGCAT 1 cut(s) 381
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.