Rorug02G0416600

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
53434356 .. 53438814
4459 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0416600.1

Sequence Viewer

Length: 2637 bp
ATGATAATCAAGCATTTCCCATTTGCATTGCTTTCTGGGTTTGTTCTTATACTTTCAGTTCTTGCGGTAGATGATCAAACAGGCTTCATTAGCTTGGACTGTGGGCTACCAACAAATTCAAGCTACTCTGAGCCAGGATCAGGCATTGACTACATTTCAGATGAACCCTTTATTGACACTGGCATAAGTAAAAGCATTGCGCCTGAATATAAAGCTACTCATCAGCAGCAAGCAGCTCATGTTCGTAGCTTTCCTCAATGGACCAGAAACTGTTACAGAGTGAACATTACAAGCGGTACTAAGTATTTGATCAGAGCAAGTTTTGTGTATGGGAACTATGATGGGCTAAATAAACTGCCAAAGTTTGATCTGCACATGGGACCTAGTTTCTGGGATTCAATCACACTAGCCAATGCAGCCGCGAGTACCATCAAAGAAGTCATTCATATTCCCTCATTAGACTACATTCATGTATGTCTTGTGAACACAGGCTCTGGAACGCCATTCATTTCAGCATTGGAACTGAGGCCTTTGAAAAACACAACTTATATAACCAAAAGTGGTTCACTGGCAGTTGAGTATCGCTTGGACGTTGGTTCCCAAAGCAATCAATCATACAGGTATGACTATGACGTTTTTGATCGAATCTGGTTGCCTTTCAACTTCAATTTGTGGGGAGAGTTAAGTACCTCGCTTACGGTTGATTCCCTAATTCATAATGACTACCAAGTGCCATCTATAGTAATGAGTACTGCAGGCACTGCGATGAACTCTAGTACTCCCATGTATATCGGCTGGAATCCGCCAGATGCAACTTCTGAATACTATGTGTATATGCACTTTGCTGAAATCCAGAAGTTGAAAGCCAACGAGTCCAGATCCTTCAATATCACCCTGAATGACAAGCTTTTTTATGGACCTCTAGTGCCAAGTTACTTGAGTACAATTACTATTTACAGCCCAGCAGCGTTAACAGGAGGAAATTTTACATTCTCACTCTTCAAAACTGAGAATTCAACACTGCCACCGATCCTCAATGCCATGGAGTACTTCAGAGTCATAGATTTCTCACAGTCGGAAACTAATCAAGACGATGTGGTTGCAATCACAAACATAAAGTCAACATATGGAGTTGAGAAAAATTGGCAGGGAGATCCATGTGGTCCACAAGAGTACGTCTGGGAAGGTCTAAACTGTAGCTCGGACGATCCCCCAAGAATCACATCCTTGGACTTGTCCTCGAGCGGATTGACAGGAGAAATAACTTCATATATATCCAATCTTGACATGTTACAATCTTTGGATTTATCTAACAATAGCTTAACTGGATCAGTACCTGAGTTTCTGTCTAAATTGCCAAACCTGAAAGTCCTTAACTTGGAAAAGAACAAGCTGAATGGTTCACTTCCAAGTACGCTTATCGAAAAATCGACAAGTGGATCACTATCCTTAAGGGTCGGAGAAAATGAAAACTTATGTGCAGCAATTTCATGCAAAAAGAAGAAAAACAATGTACTCATTCCAATAATAGCAGCAGTTGGTGGATTTGCTATTCTGTTTGTAGTATCAGTTGTCATATTATTTAGCATGAGAAGAAAAAGAAAACAAGTTGGAACAGCAGTGGCAGAGTCCAACATTCAAATGGATTCGTTAGAAAATTTCGAGTCCAAGAAGAAACAATTTACATACTCAGAGGTGCTGACGATTACTAACAACTTTCAGACAATTCTTGGGAAAGGTGGATTTGGACTGGTTTACCATGGCTATGTAGATGATACTCAAGTAGCTGTGAAAGTACTTTCTCCATCATCAGTTCAAGGATACCAACAATTTCAAGCAGAGGTCAAACTTCTTATGAGAGTTCATCATAGAAACTTGACTGGCCTTGTTGGATATTGCAATGAAGGAACGAACATGGCTCTCCTCTACGAATATATGGCCAATGGAAATTTGGAATCGCATCTCTTGGGTGAAGGTAGCAACGCAATTCTCTTGACTTGGGAAAGTCGACTTAGAATAGCGGCTGATGCAGCACAAGGACTGGAGTATCTTCACAATGGTAGTAAGCCACCTATTATCCACAGAGATGTGAAGACACCAAATATTTTGTTAGCCGAAAATTTCCACGCAAAGTTGGCTGATTTTGGCCTATCCAGAATGTTCCCAACTGACGAAGGCACTCATATGTCAACAGCTGTTGCTGGCACCCCTGGATACCTTGACCCTGAGTACCACATAACAGGCTGGTTGAATGAGAAGAGTGATGTATATAGCTTTGGAGTTGTTCTCTTGCAGATAATAACTAGCCGACCTGTGATATCAAGAACAGCCCAAGTGAATAGTCATGTAAGTCAATGGGTTAGCTCCATGCTTTCTAATGGGGATATCAAAAGTATTGTTGATCCTAAGTTACGAGGAGATTTTGAAATCAACTCTGCGTGGAAGGCTGTTGAGTTGGCAAGGGATTGTATGTCTGAAATGTCAACTGGAAGGCCAAACATGAGTGAGGCGGTGACAAGACTCAAAGAGTGCTTGGGAGCAGAGTTGGCTCGAATAAATGAAAGTCGTATGAGTGGAACAACCGATTCATCATTTGTGTTCTCCATGAATACTGGACTCAGTCCTTCGGCGAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

878

Amino Acids

96.93

Weight (kDa)

5.7

Isoelectric Point (pI)

38.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 32 - 353 1.7e-120 Malectin-like domain
LRR_8 PF13855 405 - 465 3.3e-08 Leucine rich repeat
LRR_4 PF12799 431 - 467 8.3e-07 Leucine Rich repeats (2 copies)
PK_Tyr_Ser-Thr PF07714 573 - 841 2.8e-42 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 575 - 838 4.7e-39 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2204
AccBSI CCGCTC 1 cut(s) 1245
AccI GTMKAC 1 cut(s) 2008
AccII CGCG 1 cut(s) 422
AciI CCGC 7 cut(s) 65, 294, 420, 803, 1245, 2021, 2510
AclWI GGATC 8 cut(s) 145, 873, 1024, 1148, 1202, 1336, 1447, 2396
AcoI YGGCCR 1 cut(s) 1938
AcsI RAATTY 6 cut(s) 115, 982, 1012, 1657, 1948, 2119
AcuI CTGAAG 1 cut(s) 1036
AfiI CCNNNNNNNGG 2 cut(s) 140, 1378
AflII CTTAAG 1 cut(s) 1450
AflIII ACRYGT 1 cut(s) 1287
AjnI CCWGG 2 cut(s) 133, 2209
AlwI GGATC 8 cut(s) 145, 873, 1024, 1148, 1202, 1336, 1447, 2396
AlwNI CAGNNNCTG 4 cut(s) 270, 494, 761, 1337
Ama87I CYCGRG 1 cut(s) 1240
AoxI GGCC 5 cut(s) 527, 1882, 1938, 2146, 2492
ApeKI GCWGC 7 cut(s) 226, 233, 416, 965, 1481, 1532, 2030
ApoI RAATTY 6 cut(s) 115, 982, 1012, 1657, 1948, 2119
ArsI GACNNNNNNTTYG 2 cut(s) 1103, 1135
Asp700I GAANNNNTTC 1 cut(s) 441
AspLEI GCGC 1 cut(s) 202
AspS9I GGNCC 4 cut(s) 261, 380, 917, 1163
AsuHPI GGTGA 3 cut(s) 883, 1982, 2524
AvaI CYCGRG 1 cut(s) 1240
AvaII GGWCC 4 cut(s) 261, 380, 917, 1163
BaeI ACNNNNGTAYC 4 cut(s) 1767, 1800, 2030, 2063
BalI TGGCCA 1 cut(s) 1940
BanI GGYRCC 1 cut(s) 2204
BbsI GAAGAC 1 cut(s) 2099
BbvI GCAGC 7 cut(s) 238, 245, 428, 977, 1493, 1544, 2042
BccI CCATC 4 cut(s) 335, 437, 742, 1813
BcgI CGANNNNNNTGC 2 cut(s) 1082, 1116
BciT130I CCWGG 2 cut(s) 135, 2211
BciVI GTATCC 2 cut(s) 1814, 2207
BclI TGATCA 2 cut(s) 73, 309
BfaI CTAG 5 cut(s) 384, 407, 774, 923, 2304
BfmI CTRYAG 3 cut(s) 738, 753, 1195
BfrI CTTAAG 1 cut(s) 1450
BfuI GTATCC 2 cut(s) 1814, 2207
BisI GCNGC 9 cut(s) 227, 234, 417, 420, 966, 1482, 1533, 2022, 2031
BlsI GCNGC 9 cut(s) 228, 235, 418, 421, 967, 1483, 1534, 2023, 2032
BmcAI AGTACT 4 cut(s) 751, 778, 1049, 1797
Bme1390I CCNGG 2 cut(s) 135, 2211
Bme18I GGWCC 4 cut(s) 261, 380, 917, 1163
BmeT110I CYCGRG 1 cut(s) 1240
BmgT120I GGNCC 4 cut(s) 261, 380, 917, 1163
BmiI GGNNCC 3 cut(s) 381, 598, 2206
BmrFI CCNGG 2 cut(s) 135, 2211
BmsI GCATC 3 cut(s) 799, 1969, 2017
BpiI GAAGAC 1 cut(s) 2099
BplI GAGNNNNNCTC 2 cut(s) 2271, 2303
BpmI CTGGAG 1 cut(s) 2063
BpuEI CTTGAG 2 cut(s) 958, 1764
BsaBI GATNNNNATC 1 cut(s) 1444
BsaJI CCNNGG 4 cut(s) 1041, 1227, 1759, 2209
Bsc4I CCNNNNNNNGG 2 cut(s) 140, 1378
Bse1I ACTGG 8 cut(s) 184, 573, 1330, 1755, 1885, 2046, 2491, 2617
Bse3DI GCAATG 3 cut(s) 26, 195, 1906
Bse8I GATNNNNATC 1 cut(s) 1444
BseBI CCWGG 2 cut(s) 135, 2211
BseDI CCNNGG 4 cut(s) 1041, 1227, 1759, 2209
BseGI GGATG 1 cut(s) 1223
BseJI GATNNNNATC 1 cut(s) 1444
BseLI CCNNNNNNNGG 2 cut(s) 140, 1378
BseMI GCAATG 3 cut(s) 26, 195, 1906
BseMII CTCAG 7 cut(s) 120, 515, 999, 1329, 1704, 2217, 2632
BseNI ACTGG 8 cut(s) 184, 573, 1330, 1755, 1885, 2046, 2491, 2617
BseRI GAGGAG 2 cut(s) 1913, 2430
BseXI GCAGC 7 cut(s) 238, 245, 428, 977, 1493, 1544, 2042
BseYI CCCAGC 1 cut(s) 961
BsgI GTGCAG 2 cut(s) 356, 1500
Bsh1236I CGCG 1 cut(s) 422
BshFI GGCC 5 cut(s) 529, 1884, 1940, 2148, 2494
BshNI GGYRCC 1 cut(s) 2204
BsiHKCI CYCGRG 1 cut(s) 1240
BslFI GGGAC 1 cut(s) 393
BslI CCNNNNNNNGG 2 cut(s) 140, 1378
BsmFI GGGAC 1 cut(s) 393
BsnI GGCC 5 cut(s) 529, 1884, 1940, 2148, 2494
BsoBI CYCGRG 1 cut(s) 1240
Bsp19I CCATGG 2 cut(s) 1041, 1759
BspACI CCGC 7 cut(s) 65, 294, 420, 803, 1245, 2021, 2510
BspANI GGCC 5 cut(s) 529, 1884, 1940, 2148, 2494
BspCNI CTCAG 7 cut(s) 121, 516, 1000, 1330, 1703, 2218, 2631
BspFNI CGCG 1 cut(s) 422
BspLI GGNNCC 3 cut(s) 381, 598, 2206
BspMAI CTGCAG 1 cut(s) 757
BspPI GGATC 8 cut(s) 145, 873, 1024, 1148, 1202, 1336, 1447, 2396
BspT107I GGYRCC 1 cut(s) 2204
BspTI CTTAAG 1 cut(s) 1450
BsrBI CCGCTC 1 cut(s) 1245
BsrDI GCAATG 3 cut(s) 26, 195, 1906
BsrI ACTGG 8 cut(s) 184, 573, 1330, 1755, 1885, 2046, 2491, 2617
BssECI CCNNGG 4 cut(s) 1041, 1227, 1759, 2209
BssT1I CCWWGG 3 cut(s) 1041, 1227, 1759
Bst2UI CCWGG 2 cut(s) 135, 2211
Bst4CI ACNGT 5 cut(s) 101, 272, 700, 1074, 1196
Bst6I CTCTTC 2 cut(s) 1004, 2252
BstAFI CTTAAG 1 cut(s) 1450
BstAPI GCANNNNNTGC 1 cut(s) 761
BstC8I GCNNGC 3 cut(s) 231, 757, 2203
BstDSI CCRYGG 2 cut(s) 1041, 1759
BstF5I GGATG 1 cut(s) 1223
BstFNI CGCG 1 cut(s) 422
BstHHI GCGC 1 cut(s) 202
BstMWI GCNNNNNNNGC 8 cut(s) 90, 416, 761, 2027, 2030, 2135, 2444, 2546
BstNI CCWGG 2 cut(s) 135, 2211
BstNSI RCATGY 1 cut(s) 1291
BstSCI CCNGG 2 cut(s) 133, 2209
BstSFI CTRYAG 3 cut(s) 738, 753, 1195
BstUI CGCG 1 cut(s) 422
BstV1I GCAGC 7 cut(s) 238, 245, 428, 977, 1493, 1544, 2042
BstV2I GAAGAC 1 cut(s) 2099
BstX2I RGATCY 2 cut(s) 878, 1153
BstYI RGATCY 2 cut(s) 878, 1153
BsuI GTATCC 2 cut(s) 1814, 2207
BsuRI GGCC 5 cut(s) 529, 1884, 1940, 2148, 2494
BtgI CCRYGG 2 cut(s) 1041, 1759
BtgZI GCGATG 1 cut(s) 779
BtsCI GGATG 1 cut(s) 1223
BtsI GCAGTG 3 cut(s) 759, 1019, 1626
BtsIMutI CAGTG 5 cut(s) 177, 566, 759, 1019, 1626
Cac8I GCNNGC 3 cut(s) 231, 757, 2203
CaiI CAGNNNCTG 4 cut(s) 270, 494, 761, 1337
CfoI GCGC 1 cut(s) 202
Cfr13I GGNCC 4 cut(s) 261, 380, 917, 1163
EaeI YGGCCR 1 cut(s) 1938
Eam1104I CTCTTC 2 cut(s) 1004, 2252
EarI CTCTTC 2 cut(s) 1004, 2252
EciI GGCGGA 1 cut(s) 792
Eco130I CCWWGG 3 cut(s) 1041, 1227, 1759
Eco147I AGGCCT 1 cut(s) 529
Eco32I GATATC 2 cut(s) 2319, 2386
Eco47I GGWCC 4 cut(s) 261, 380, 917, 1163
Eco57I CTGAAG 1 cut(s) 1036
Eco88I CYCGRG 1 cut(s) 1240
EcoO109I RGGNCCY 1 cut(s) 380
EcoRI GAATTC 1 cut(s) 1012
EcoRII CCWGG 2 cut(s) 133, 2209
EcoRV GATATC 2 cut(s) 2319, 2386
EcoT14I CCWWGG 3 cut(s) 1041, 1227, 1759
ErhI CCWWGG 3 cut(s) 1041, 1227, 1759
FaqI GGGAC 1 cut(s) 393
FauNDI CATATG 2 cut(s) 1126, 2184
FbaI TGATCA 2 cut(s) 73, 309
FblI GTMKAC 1 cut(s) 2008
Fnu4HI GCNGC 9 cut(s) 227, 234, 417, 420, 966, 1482, 1533, 2022, 2031
FokI GGATG 1 cut(s) 1210
Fsp4HI GCNGC 9 cut(s) 227, 234, 417, 420, 966, 1482, 1533, 2022, 2031
FspBI CTAG 5 cut(s) 384, 407, 774, 923, 2304
GlaI GCGC 1 cut(s) 201
GluI GCNGC 9 cut(s) 227, 234, 417, 420, 966, 1482, 1533, 2022, 2031
GsaI CCCAGC 1 cut(s) 965
GsuI CTGGAG 1 cut(s) 2063
HaeIII GGCC 5 cut(s) 529, 1884, 1940, 2148, 2494
HhaI GCGC 1 cut(s) 202
Hin6I GCGC 1 cut(s) 200
HinP1I GCGC 1 cut(s) 200
HincII GTYRAC 5 cut(s) 972, 1122, 2009, 2190, 2484
HindII GTYRAC 5 cut(s) 972, 1122, 2009, 2190, 2484
HindIII AAGCTT 1 cut(s) 905
HpaI GTTAAC 1 cut(s) 972
HphI GGTGA 3 cut(s) 883, 1982, 2524
Hpy188III TCNNGA 8 cut(s) 495, 853, 876, 1088, 1283, 1993, 2154, 2322
HpyAV CCTTC 8 cut(s) 892, 1178, 1898, 1967, 2168, 2437, 2484, 2634
HpyCH4III ACNGT 5 cut(s) 101, 272, 700, 1074, 1196
HpyCH4IV ACGT 3 cut(s) 591, 633, 1176
HpyF10VI GCNNNNNNNGC 8 cut(s) 90, 416, 761, 2027, 2030, 2135, 2444, 2546
HpySE526I ACGT 3 cut(s) 591, 633, 1176
HspAI GCGC 1 cut(s) 200
Ksp22I TGATCA 2 cut(s) 73, 309
KspAI GTTAAC 1 cut(s) 972
LmnI GCTCC 2 cut(s) 2369, 2537
Lsp1109I GCAGC 7 cut(s) 238, 245, 428, 977, 1493, 1544, 2042
LweI GCATC 3 cut(s) 799, 1969, 2017
MaeI CTAG 5 cut(s) 384, 407, 774, 923, 2304
MaeII ACGT 3 cut(s) 591, 633, 1176
MaeIII GTNAC 5 cut(s) 272, 932, 1290, 2409, 2512
MbiI CCGCTC 1 cut(s) 1245
MboII GAAGA 7 cut(s) 991, 1513, 1605, 1684, 2042, 2104, 2269
MflI RGATCY 2 cut(s) 878, 1153
MlsI TGGCCA 1 cut(s) 1940
MluNI TGGCCA 1 cut(s) 1940
MlyI GAGTC 6 cut(s) 881, 1065, 1637, 1673, 2514, 2610
MmeI TCCRAC 5 cut(s) 1056, 1438, 1591, 1656, 1870
Mox20I TGGCCA 1 cut(s) 1940
MroXI GAANNNNTTC 1 cut(s) 441
MscI TGGCCA 1 cut(s) 1940
MseI TTAA 5 cut(s) 683, 971, 1322, 1374, 1451
MslI CAYNNNNRTG 5 cut(s) 764, 1640, 1764, 2085, 2183
Msp20I TGGCCA 1 cut(s) 1940
MspA1I CMGCKG 1 cut(s) 2195
MspCI CTTAAG 1 cut(s) 1450
MspR9I CCNGG 2 cut(s) 135, 2211
MvaI CCWGG 2 cut(s) 135, 2211
MvnI CGCG 1 cut(s) 422
MwoI GCNNNNNNNGC 8 cut(s) 90, 416, 761, 2027, 2030, 2135, 2444, 2546
NcoI CCATGG 2 cut(s) 1041, 1759
NdeI CATATG 2 cut(s) 1126, 2184
NlaIV GGNNCC 3 cut(s) 381, 598, 2206
NmuCI GTSAC 1 cut(s) 2512
NspI RCATGY 1 cut(s) 1291
PaeR7I CTCGAG 1 cut(s) 1240
PceI AGGCCT 1 cut(s) 529
PciI ACATGT 1 cut(s) 1287
PdmI GAANNNNTTC 1 cut(s) 441
PfeI GAWTC 8 cut(s) 395, 645, 704, 799, 1218, 1646, 1955, 2585
PflFI GACNNNGTC 1 cut(s) 2619
PkrI GCNGC 9 cut(s) 228, 235, 418, 421, 967, 1483, 1534, 2023, 2032
PleI GAGTC 6 cut(s) 880, 1064, 1636, 1672, 2514, 2610
PpsI GAGTC 6 cut(s) 880, 1064, 1636, 1672, 2514, 2610
PpuMI RGGWCCY 1 cut(s) 380
PscI ACATGT 1 cut(s) 1287
Psp5II RGGWCCY 1 cut(s) 380
Psp6I CCWGG 2 cut(s) 133, 2209
PspFI CCCAGC 1 cut(s) 961
PspGI CCWGG 2 cut(s) 133, 2209
PspN4I GGNNCC 3 cut(s) 381, 598, 2206
PspPI GGNCC 4 cut(s) 261, 380, 917, 1163
PspPPI RGGWCCY 1 cut(s) 380
PspXI VCTCGAGB 1 cut(s) 1240
PstI CTGCAG 1 cut(s) 757
PstNI CAGNNNCTG 4 cut(s) 270, 494, 761, 1337
PsuI RGATCY 2 cut(s) 878, 1153
PsyI GACNNNGTC 1 cut(s) 2619
PvuII CAGCTG 1 cut(s) 2195
RseI CAYNNNNRTG 5 cut(s) 764, 1640, 1764, 2085, 2183
SalI GTCGAC 1 cut(s) 2007
SaqAI TTAA 5 cut(s) 683, 971, 1322, 1374, 1451
SatI GCNGC 9 cut(s) 227, 234, 417, 420, 966, 1482, 1533, 2022, 2031
Sau96I GGNCC 4 cut(s) 261, 380, 917, 1163
ScaI AGTACT 4 cut(s) 751, 778, 1049, 1797
SchI GAGTC 6 cut(s) 881, 1065, 1637, 1673, 2514, 2610
ScrFI CCNGG 2 cut(s) 135, 2211
SfaNI GCATC 3 cut(s) 799, 1969, 2017
SfcI CTRYAG 3 cut(s) 738, 753, 1195
Sfr274I CTCGAG 1 cut(s) 1240
SinI GGWCC 4 cut(s) 261, 380, 917, 1163
SlaI CTCGAG 1 cut(s) 1240
SmiMI CAYNNNNRTG 5 cut(s) 764, 1640, 1764, 2085, 2183
SmlI CTYRAG 4 cut(s) 937, 1240, 1450, 1779
SmoI CTYRAG 4 cut(s) 937, 1240, 1450, 1779
SseBI AGGCCT 1 cut(s) 529
SsiI CCGC 7 cut(s) 65, 294, 420, 803, 1245, 2021, 2510
SspI AATATT 1 cut(s) 2104
SspMI CTAG 5 cut(s) 384, 407, 774, 923, 2304
StuI AGGCCT 1 cut(s) 529
StyD4I CCNGG 2 cut(s) 133, 2209
StyI CCWWGG 3 cut(s) 1041, 1227, 1759
TaaI ACNGT 5 cut(s) 101, 272, 700, 1074, 1196
TaiI ACGT 3 cut(s) 594, 636, 1179
TaqI TCGA 7 cut(s) 643, 1241, 1422, 1430, 1662, 2008, 2551
TatI WGTACW 6 cut(s) 749, 776, 941, 1047, 1513, 1795
TauI GCSGC 2 cut(s) 422, 2024
TfiI GAWTC 8 cut(s) 395, 645, 704, 799, 1218, 1646, 1955, 2585
Tru1I TTAA 5 cut(s) 683, 971, 1322, 1374, 1451
Tru9I TTAA 5 cut(s) 683, 971, 1322, 1374, 1451
TscAI CASTG 5 cut(s) 184, 573, 766, 1026, 1626
TseFI GTSAC 1 cut(s) 2512
TseI GCWGC 7 cut(s) 226, 233, 416, 965, 1481, 1532, 2030
Tsp45I GTSAC 1 cut(s) 2512
TspRI CASTG 5 cut(s) 184, 573, 766, 1026, 1626
Tth111I GACNNNGTC 1 cut(s) 2619
Vha464I CTTAAG 1 cut(s) 1450
VpaK11BI GGWCC 4 cut(s) 261, 380, 917, 1163
XapI RAATTY 6 cut(s) 115, 982, 1012, 1657, 1948, 2119
XceI RCATGY 1 cut(s) 1291
XcmI CCANNNNNNNNNTGG 2 cut(s) 1639, 1948
XhoI CTCGAG 1 cut(s) 1240
XmiI GTMKAC 1 cut(s) 2008
XmnI GAANNNNTTC 1 cut(s) 441
XspI CTAG 5 cut(s) 384, 407, 774, 923, 2304
ZrmI AGTACT 4 cut(s) 751, 778, 1049, 1797
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.