Rh2BG516900

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
72506338 .. 72507517
1180 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG516900.1

Sequence Viewer

Length: 510 bp
ATGACTATTGAATCTGAAGCCTGCATTTTGGACCTGACGGCTCTTGATGGCTCCCCTGATTTTCGTTTCGAAACCATTCCGGATGGTCTTCAAAACTCGGATGAAGATACCACCCAAGACCACATATTGCTTGATGAGAGCTGGTTAACAAATGGTTTCTTGGACAAGGTGACAGATTGGGTTCCAGGATTCAAATCTATACGTTTAAGGGATCTCCCAAACAATTTTATGATTACAAATCCCAATGACACCCATTGGACCTTTTGCTTGCAAGCAATTGAAAGAGTTGGTGAAGCTTCAGCTTTCATTCTTCATACTTTTGATGCTCTGGAGTCACATGTTTTGGAAGCTTTCTCTTCAACTATGCTTGTTTATACGATTGGGCCTCTCCAACTACTTCTCAATCAATTACCAGAAGAATCTTTGAAGCCTATGGGGTACAGTGTATGGAAAGAAGAAACTGACTGCCTCCAAGGCACCAAACTCAGTTCTGTGTGTTTACTTTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

169

Amino Acids

19.13

Weight (kDa)

4.22

Isoelectric Point (pI)

44.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 476
AccIII TCCGGA 1 cut(s) 79
AclWI GGATC 1 cut(s) 219
AcuI CTGAAG 2 cut(s) 36, 282
AfaI GTAC 1 cut(s) 440
AflIII ACRYGT 1 cut(s) 337
AgsI TTSAA 6 cut(s) 11, 92, 193, 281, 360, 427
AjnI CCWGG 1 cut(s) 184
AluBI AGCT 4 cut(s) 141, 296, 302, 350
AluI AGCT 4 cut(s) 141, 296, 302, 350
AlwI GGATC 1 cut(s) 219
Aor13HI TCCGGA 1 cut(s) 79
AoxI GGCC 1 cut(s) 383
Asp700I GAANNNNTTC 1 cut(s) 75
AspS9I GGNCC 3 cut(s) 31, 258, 383
AsuHPI GGTGA 2 cut(s) 181, 302
AsuII TTCGAA 1 cut(s) 69
AvaII GGWCC 2 cut(s) 31, 258
BanI GGYRCC 1 cut(s) 476
BbsI GAAGAC 1 cut(s) 80
BccI CCATC 2 cut(s) 41, 77
BceAI ACGGC 1 cut(s) 54
BciT130I CCWGG 1 cut(s) 186
BglI GCCNNNNNGGC 1 cut(s) 474
Bme1390I CCNGG 1 cut(s) 186
Bme18I GGWCC 2 cut(s) 31, 258
BmgT120I GGNCC 3 cut(s) 31, 258, 383
BmiI GGNNCC 3 cut(s) 52, 183, 478
BmrFI CCNGG 1 cut(s) 186
BmsI GCATC 1 cut(s) 313
BpiI GAAGAC 1 cut(s) 80
BpmI CTGGAG 1 cut(s) 350
Bpu14I TTCGAA 1 cut(s) 69
BsaBI GATNNNNATC 1 cut(s) 193
BsaJI CCNNGG 1 cut(s) 472
BsaWI WCCGGW 1 cut(s) 79
Bse8I GATNNNNATC 1 cut(s) 193
BseAI TCCGGA 1 cut(s) 79
BseBI CCWGG 1 cut(s) 186
BseDI CCNNGG 1 cut(s) 472
BseGI GGATG 2 cut(s) 88, 106
BseJI GATNNNNATC 1 cut(s) 193
BseMII CTCAG 1 cut(s) 499
BshFI GGCC 1 cut(s) 385
BshNI GGYRCC 1 cut(s) 476
BsiSI CCGG 1 cut(s) 80
BsnI GGCC 1 cut(s) 385
Bsp119I TTCGAA 1 cut(s) 69
Bsp13I TCCGGA 1 cut(s) 79
Bsp143I GATC 1 cut(s) 211
BspANI GGCC 1 cut(s) 385
BspCNI CTCAG 1 cut(s) 498
BspEI TCCGGA 1 cut(s) 79
BspLI GGNNCC 3 cut(s) 52, 183, 478
BspPI GGATC 1 cut(s) 219
BspT104I TTCGAA 1 cut(s) 69
BspT107I GGYRCC 1 cut(s) 476
BssECI CCNNGG 1 cut(s) 472
BssMI GATC 1 cut(s) 211
BssT1I CCWWGG 1 cut(s) 472
Bst2UI CCWGG 1 cut(s) 186
Bst4CI ACNGT 1 cut(s) 443
Bst6I CTCTTC 1 cut(s) 361
BstBI TTCGAA 1 cut(s) 69
BstC8I GCNNGC 3 cut(s) 22, 269, 273
BstDEI CTNAG 1 cut(s) 485
BstF5I GGATG 2 cut(s) 88, 106
BstKTI GATC 1 cut(s) 214
BstMBI GATC 1 cut(s) 211
BstMWI GCNNNNNNNGC 1 cut(s) 474
BstNI CCWGG 1 cut(s) 186
BstNSI RCATGY 1 cut(s) 341
BstSCI CCNGG 1 cut(s) 184
BstV2I GAAGAC 1 cut(s) 80
BstX2I RGATCY 1 cut(s) 211
BstYI RGATCY 1 cut(s) 211
BsuRI GGCC 1 cut(s) 385
BtsCI GGATG 2 cut(s) 88, 106
BtsIMutI CAGTG 1 cut(s) 448
Cac8I GCNNGC 3 cut(s) 22, 269, 273
Cfr13I GGNCC 3 cut(s) 31, 258, 383
Csp6I GTAC 1 cut(s) 439
CviAII CATG 1 cut(s) 338
CviJI RGCY 9 cut(s) 20, 41, 51, 141, 296, 302, 350, 385, 430
CviKI_1 RGCY 9 cut(s) 20, 41, 51, 141, 296, 302, 350, 385, 430
CviQI GTAC 1 cut(s) 439
DdeI CTNAG 1 cut(s) 485
DpnI GATC 1 cut(s) 213
DpnII GATC 1 cut(s) 211
Eam1104I CTCTTC 1 cut(s) 361
EarI CTCTTC 1 cut(s) 361
Eco130I CCWWGG 1 cut(s) 472
Eco47I GGWCC 2 cut(s) 31, 258
Eco57I CTGAAG 2 cut(s) 36, 282
EcoRII CCWGG 1 cut(s) 184
EcoT14I CCWWGG 1 cut(s) 472
ErhI CCWWGG 1 cut(s) 472
FaeI CATG 1 cut(s) 341
FaiI YATR 9 cut(s) 125, 200, 230, 315, 339, 365, 375, 434, 448
FatI CATG 1 cut(s) 337
FokI GGATG 2 cut(s) 95, 113
GsuI CTGGAG 1 cut(s) 350
HaeIII GGCC 1 cut(s) 385
HapII CCGG 1 cut(s) 80
Hin1II CATG 1 cut(s) 341
HincII GTYRAC 1 cut(s) 147
HindII GTYRAC 1 cut(s) 147
HindIII AAGCTT 2 cut(s) 294, 348
HinfI GANTC 4 cut(s) 11, 189, 332, 419
HpaI GTTAAC 1 cut(s) 147
HpaII CCGG 1 cut(s) 80
HphI GGTGA 2 cut(s) 181, 302
Hpy166II GTNNAC 2 cut(s) 147, 500
Hpy188I TCNGA 2 cut(s) 16, 100
Hpy188III TCNNGA 3 cut(s) 44, 80, 329
Hpy8I GTNNAC 2 cut(s) 147, 500
HpyCH4III ACNGT 1 cut(s) 443
HpyCH4IV ACGT 1 cut(s) 202
HpyCH4V TGCA 2 cut(s) 24, 271
HpyF10VI GCNNNNNNNGC 1 cut(s) 474
HpyF3I CTNAG 1 cut(s) 485
HpySE526I ACGT 1 cut(s) 202
Hsp92II CATG 1 cut(s) 341
Kpn2I TCCGGA 1 cut(s) 79
KspAI GTTAAC 1 cut(s) 147
Kzo9I GATC 1 cut(s) 211
LmnI GCTCC 1 cut(s) 56
LpnPI CCDG 9 cut(s) 34, 47, 69, 93, 127, 171, 198, 314, 426
LweI GCATC 1 cut(s) 313
MaeII ACGT 1 cut(s) 202
MaeIII GTNAC 2 cut(s) 169, 333
MalI GATC 1 cut(s) 213
MboI GATC 1 cut(s) 211
MboII GAAGA 6 cut(s) 80, 116, 302, 348, 428, 467
MfeI CAATTG 1 cut(s) 276
MflI RGATCY 1 cut(s) 211
MluCI AATT 3 cut(s) 223, 276, 407
MlyI GAGTC 1 cut(s) 341
MmeI TCCRAC 1 cut(s) 415
MnlI CCTC 2 cut(s) 396, 479
MroI TCCGGA 1 cut(s) 79
MroXI GAANNNNTTC 1 cut(s) 75
MseI TTAA 2 cut(s) 146, 206
MspI CCGG 1 cut(s) 80
MspR9I CCNGG 1 cut(s) 186
MunI CAATTG 1 cut(s) 276
MvaI CCWGG 1 cut(s) 186
MwoI GCNNNNNNNGC 1 cut(s) 474
NdeII GATC 1 cut(s) 211
NlaIII CATG 1 cut(s) 341
NlaIV GGNNCC 3 cut(s) 52, 183, 478
NmuCI GTSAC 2 cut(s) 169, 333
NspI RCATGY 1 cut(s) 341
NspV TTCGAA 1 cut(s) 69
PciI ACATGT 1 cut(s) 337
PdmI GAANNNNTTC 1 cut(s) 75
PfeI GAWTC 3 cut(s) 11, 189, 419
PfoI TCCNGGA 1 cut(s) 184
PleI GAGTC 1 cut(s) 340
PpsI GAGTC 1 cut(s) 340
PscI ACATGT 1 cut(s) 337
Psp6I CCWGG 1 cut(s) 184
PspGI CCWGG 1 cut(s) 184
PspN4I GGNNCC 3 cut(s) 52, 183, 478
PspPI GGNCC 3 cut(s) 31, 258, 383
PsuI RGATCY 1 cut(s) 211
RsaI GTAC 1 cut(s) 440
RsaNI GTAC 1 cut(s) 439
SaqAI TTAA 2 cut(s) 146, 206
Sau3AI GATC 1 cut(s) 211
Sau96I GGNCC 3 cut(s) 31, 258, 383
SchI GAGTC 1 cut(s) 341
ScrFI CCNGG 1 cut(s) 186
SetI ASST 8 cut(s) 36, 143, 171, 205, 263, 298, 304, 352
SfaNI GCATC 1 cut(s) 313
SfuI TTCGAA 1 cut(s) 69
SinI GGWCC 2 cut(s) 31, 258
Sse9I AATT 3 cut(s) 223, 276, 407
StyD4I CCNGG 1 cut(s) 184
StyI CCWWGG 1 cut(s) 472
TaaI ACNGT 1 cut(s) 443
TaiI ACGT 1 cut(s) 205
TaqI TCGA 1 cut(s) 69
TasI AATT 3 cut(s) 223, 276, 407
TfiI GAWTC 3 cut(s) 11, 189, 419
Tru1I TTAA 2 cut(s) 146, 206
Tru9I TTAA 2 cut(s) 146, 206
TscAI CASTG 1 cut(s) 448
TseFI GTSAC 2 cut(s) 169, 333
Tsp45I GTSAC 2 cut(s) 169, 333
TspDTI ATGAA 3 cut(s) 117, 295, 302
TspRI CASTG 1 cut(s) 448
VpaK11BI GGWCC 2 cut(s) 31, 258
XceI RCATGY 1 cut(s) 341
XmnI GAANNNNTTC 1 cut(s) 75
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.