Rmu_co8174218.1_g000001

UDP-glucoronosyl and UDP-glucosyl transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8174218.1
OG0000097
Physical Location & Seq
Forward (+)
1 .. 677
677 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8174218.1_g000001.1.cds

Sequence Viewer

Length: 587 bp
ctcaagtttgccaagctgttgcaccacagaggttttcgtatcacctttgtgaatacagagtacaaccacagacgctttctcaaatctttaggccccaacacactagatggcttgacagacttccattttgaaaccatcccagatggattaccaccttccgattcagattccacccaagacatcacagctatctgtgattccattaacaaaaacttcttggctccatttcgtgacctcctcaccagactcaacagtagcacttttcctgtgagctgcattgtctcagatggtttcatgagcttctctattgatggtgctcaagaacttggattacctattgtattgttctttcctgtcgctgcaaatggcttcatgggcttcaaacattaccgtgctcttgttgaaaagggatttacaccaataaaagatgagaaatgtctatccaatggctacctagacactgtcattgactggataccaggaatgaaagatatccgcctaaaggatcttcccagctttttccgaactacagatcccaacgacagtccatttatactaacaggtgaagcaactgaaagagcacataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

195

Amino Acids

21.92

Weight (kDa)

5.84

Isoelectric Point (pI)

34.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 496
AclWI GGATC 2 cut(s) 513, 527
AfaI GTAC 1 cut(s) 62
AfiI CCNNNNNNNGG 1 cut(s) 502
AgsI TTSAA 3 cut(s) 131, 382, 404
AjnI CCWGG 1 cut(s) 478
AleI CACNNNNGTG 1 cut(s) 47
AloI GAACNNNNNNTCC 2 cut(s) 517, 549
AluBI AGCT 5 cut(s) 16, 188, 273, 300, 516
AluI AGCT 5 cut(s) 16, 188, 273, 300, 516
Alw21I GWGCWC 3 cut(s) 319, 397, 583
Alw26I GTCTC 1 cut(s) 286
AlwI GGATC 2 cut(s) 513, 527
AoxI GGCC 1 cut(s) 91
ApeKI GCWGC 2 cut(s) 273, 359
ArsI GACNNNNNNTTYG 2 cut(s) 110, 142
AspS9I GGNCC 1 cut(s) 92
AsuHPI GGTGA 3 cut(s) 34, 232, 575
Bbv12I GWGCWC 3 cut(s) 319, 397, 583
BbvI GCAGC 2 cut(s) 260, 346
BccI CCATC 5 cut(s) 101, 137, 143, 281, 305
BciT130I CCWGG 1 cut(s) 480
BciVI GTATCC 1 cut(s) 468
BcoDI GTCTC 1 cut(s) 286
BfaI CTAG 2 cut(s) 104, 455
BfmI CTRYAG 1 cut(s) 528
BfuI GTATCC 1 cut(s) 468
BisI GCNGC 2 cut(s) 274, 360
BlsI GCNGC 2 cut(s) 275, 361
Bme1390I CCNGG 1 cut(s) 480
BmgT120I GGNCC 1 cut(s) 92
BmiI GGNNCC 2 cut(s) 94, 222
BmrFI CCNGG 1 cut(s) 480
BpuEI CTTGAG 1 cut(s) 303
Bsc4I CCNNNNNNNGG 1 cut(s) 502
Bse1I ACTGG 1 cut(s) 476
BseBI CCWGG 1 cut(s) 480
BseGI GGATG 1 cut(s) 135
BseLI CCNNNNNNNGG 1 cut(s) 502
BseMII CTCAG 1 cut(s) 297
BseNI ACTGG 1 cut(s) 476
BseRI GAGGAG 1 cut(s) 227
BseXI GCAGC 2 cut(s) 260, 346
BseYI CCCAGC 1 cut(s) 512
BshFI GGCC 1 cut(s) 93
BsiHKAI GWGCWC 3 cut(s) 319, 397, 583
BslI CCNNNNNNNGG 1 cut(s) 502
BsmAI GTCTC 1 cut(s) 286
BsnI GGCC 1 cut(s) 93
Bsp1286I GDGCHC 3 cut(s) 319, 397, 583
Bsp143I GATC 2 cut(s) 505, 532
BspACI CCGC 1 cut(s) 496
BspANI GGCC 1 cut(s) 93
BspCNI CTCAG 1 cut(s) 296
BspHI TCATGA 1 cut(s) 294
BspLI GGNNCC 2 cut(s) 94, 222
BspPI GGATC 2 cut(s) 513, 527
BsrI ACTGG 1 cut(s) 476
BssMI GATC 2 cut(s) 505, 532
Bst2UI CCWGG 1 cut(s) 480
Bst4CI ACNGT 4 cut(s) 254, 392, 463, 545
BstDEI CTNAG 1 cut(s) 283
BstF5I GGATG 1 cut(s) 135
BstKTI GATC 2 cut(s) 508, 535
BstMAI GTCTC 1 cut(s) 286
BstMBI GATC 2 cut(s) 505, 532
BstMWI GCNNNNNNNGC 1 cut(s) 375
BstNI CCWGG 1 cut(s) 480
BstSCI CCNGG 1 cut(s) 478
BstSFI CTRYAG 1 cut(s) 528
BstV1I GCAGC 2 cut(s) 260, 346
BstX2I RGATCY 2 cut(s) 505, 532
BstYI RGATCY 2 cut(s) 505, 532
BsuI GTATCC 1 cut(s) 468
BsuRI GGCC 1 cut(s) 93
BtsCI GGATG 1 cut(s) 135
BtsIMutI CAGTG 1 cut(s) 459
CciI TCATGA 1 cut(s) 294
Cfr13I GGNCC 1 cut(s) 92
CseI GACGC 1 cut(s) 81
Csp6I GTAC 1 cut(s) 61
CviAII CATG 2 cut(s) 295, 373
CviQI GTAC 1 cut(s) 61
DdeI CTNAG 1 cut(s) 283
DpnI GATC 2 cut(s) 507, 534
DpnII GATC 2 cut(s) 505, 532
EciI GGCGGA 1 cut(s) 485
Eco32I GATATC 1 cut(s) 493
EcoO109I RGGNCCY 1 cut(s) 92
EcoRII CCWGG 1 cut(s) 478
EcoRV GATATC 1 cut(s) 493
FaeI CATG 2 cut(s) 298, 376
FaiI YATR 4 cut(s) 296, 374, 554, 585
FatI CATG 2 cut(s) 294, 372
Fnu4HI GCNGC 2 cut(s) 274, 360
FokI GGATG 1 cut(s) 122
Fsp4HI GCNGC 2 cut(s) 274, 360
FspBI CTAG 2 cut(s) 104, 455
GluI GCNGC 2 cut(s) 274, 360
GsaI CCCAGC 1 cut(s) 516
HaeIII GGCC 1 cut(s) 93
HgaI GACGC 1 cut(s) 81
Hin1II CATG 2 cut(s) 298, 376
HinfI GANTC 4 cut(s) 161, 167, 197, 246
HphI GGTGA 3 cut(s) 34, 232, 575
Hpy188I TCNGA 4 cut(s) 160, 166, 286, 524
Hpy188III TCNNGA 3 cut(s) 230, 295, 320
HpyAV CCTTC 1 cut(s) 165
HpyCH4III ACNGT 4 cut(s) 254, 392, 463, 545
HpyCH4V TGCA 3 cut(s) 22, 276, 362
HpyF10VI GCNNNNNNNGC 1 cut(s) 375
HpyF3I CTNAG 1 cut(s) 283
Hsp92II CATG 2 cut(s) 298, 376
Kzo9I GATC 2 cut(s) 505, 532
LmnI GCTCC 1 cut(s) 226
LpnPI CCDG 9 cut(s) 153, 256, 279, 366, 457, 465, 492, 526, 546
Lsp1109I GCAGC 2 cut(s) 260, 346
MaeI CTAG 2 cut(s) 104, 455
MaeIII GTNAC 1 cut(s) 230
MalI GATC 2 cut(s) 507, 534
MboI GATC 2 cut(s) 505, 532
MboII GAAGA 1 cut(s) 500
MflI RGATCY 2 cut(s) 505, 532
MhlI GDGCHC 3 cut(s) 319, 397, 583
MlyI GAGTC 1 cut(s) 240
MnlI CCTC 3 cut(s) 23, 245, 248
MseI TTAA 1 cut(s) 204
MslI CAYNNNNRTG 2 cut(s) 47, 390
MspR9I CCNGG 1 cut(s) 480
MvaI CCWGG 1 cut(s) 480
MwoI GCNNNNNNNGC 1 cut(s) 375
NdeII GATC 2 cut(s) 505, 532
NlaIII CATG 2 cut(s) 298, 376
NlaIV GGNNCC 2 cut(s) 94, 222
NmuCI GTSAC 1 cut(s) 230
OliI CACNNNNGTG 1 cut(s) 47
PagI TCATGA 1 cut(s) 294
PfeI GAWTC 3 cut(s) 161, 167, 197
PflFI GACNNNGTC 1 cut(s) 461
PkrI GCNGC 2 cut(s) 275, 361
PleI GAGTC 1 cut(s) 240
PpsI GAGTC 1 cut(s) 240
Psp6I CCWGG 1 cut(s) 478
PspFI CCCAGC 1 cut(s) 512
PspGI CCWGG 1 cut(s) 478
PspN4I GGNNCC 2 cut(s) 94, 222
PspPI GGNCC 1 cut(s) 92
PsrI GAACNNNNNNTAC 2 cut(s) 315, 347
PsuI RGATCY 2 cut(s) 505, 532
PsyI GACNNNGTC 1 cut(s) 461
RsaI GTAC 1 cut(s) 62
RsaNI GTAC 1 cut(s) 61
RseI CAYNNNNRTG 2 cut(s) 47, 390
SaqAI TTAA 1 cut(s) 204
SatI GCNGC 2 cut(s) 274, 360
Sau3AI GATC 2 cut(s) 505, 532
Sau96I GGNCC 1 cut(s) 92
SchI GAGTC 1 cut(s) 240
ScrFI CCNGG 1 cut(s) 480
SduI GDGCHC 3 cut(s) 319, 397, 583
SfcI CTRYAG 1 cut(s) 528
SmiMI CAYNNNNRTG 2 cut(s) 47, 390
SmlI CTYRAG 2 cut(s) 2, 318
SmoI CTYRAG 2 cut(s) 2, 318
SsiI CCGC 1 cut(s) 496
SspMI CTAG 2 cut(s) 104, 455
StyD4I CCNGG 1 cut(s) 478
TaaI ACNGT 4 cut(s) 254, 392, 463, 545
TatI WGTACW 1 cut(s) 60
TfiI GAWTC 3 cut(s) 161, 167, 197
Tru1I TTAA 1 cut(s) 204
Tru9I TTAA 1 cut(s) 204
TscAI CASTG 1 cut(s) 466
TseFI GTSAC 1 cut(s) 230
TseI GCWGC 2 cut(s) 273, 359
Tsp45I GTSAC 1 cut(s) 230
TspDTI ATGAA 3 cut(s) 283, 361, 500
TspRI CASTG 1 cut(s) 466
Tth111I GACNNNGTC 1 cut(s) 461
XspI CTAG 2 cut(s) 104, 455
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.