FvH4_6g39870

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000097
Physical Location & Seq
Forward (+)
31495001 .. 31496809
1809 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g39870.t1

Sequence Viewer

Length: 1467 bp
ATGGGTCCTCATCTAATAGCTGTAGGCAATAAGCCTCATGTTGTATGCATTCCTATGCCATTTCAGAGCCATATCAAGGCAATGCTTCAGTTTGCTCAACTCCTCCACCATAAAGGTTTTCATGTCACCTTTGTCAACACAGAGTTCAACCACAAACGTTTCCTTAAATCTCTTGGACCCAACTCTCTTTATGGCTTGCCTGATTTTCAATTTGAGACTATTCCAGATGGCCTTCCAAGTTCAGATGAAAAGCACTCCAAAGACATTAATTTGGTGTCTCATTCTATCATAAAGCAATCCTTGGCTCCGTTTCGCAACCTCCTCAACAAACTGAATGACAATATGAACCTTCCTGTAACTAGCATTGTCTCGGATGGCTTCCTGACGTTCACCATCACAGTTGCTGAAGAGCTTGGTGTTCCTATAGCACTGTTCTTTACTTTTGCGGCAGTCGGATTTTTGAACTTCGCAACACTTCCCACTTTGGTGGAAAAAGGAATCGCACCACTCAAAGATGAGAGCTGCTTAACAGATGAACTCTTGGACATGGTAGTAGACTGGGTTCCGGGACTGAAAGATATCCGTTTAAGGGATCTCTCAGGCTCCTGGAGAACTAGGAACCCTGATGACATCTTGTTTAAAGCCGGGTTAGAAGCAGTGGAGGCAGCTCACAAAGCTTCAGCTGTTGTTGTTCATACTTTTGAGGCATTGGAGGCAGATGTTTTGGAAGCTCTCTCTAGCAATACTACATGTAAGCTTCCACCTGTTTACGCCATTGGCCCTCTCCAATTACTTCTCAATCAGATACCGGAACACCCTTTGAAGTCTGTGGGATATAGTTTACGGAAAGAAGAAACTGAGTGCCTGCGATGGCTAAATGGTAATAAGGCACCAAACTCAGTTGTGTATGTCAATTTTGGGAGTCTAGTGGTCATGACATCAAAACAACTTATTGAGTTTGCTTGGGGACTTGCAAATAGCAAACTTCCATTCTTGTGGGTGATTAGACCTGATTTGGTAGCTGGTGAATGCGCGATTTTGCCGCCTGAGTTTGTAGCTGAAACAAAGGAAAGAGGTCTAATAGCGAATTGGTGTCCACAAGAGCAAGTGCTCAACCATCCATCAGTTGGAGGTTTTTTGACACACAGCGGTTGGAATTCAACCATGGAGAGTATTTCTGCCGGGGTGCCTATGCTATGTTGGCCATTGATCGGTGACCAGCGGATCAACTGTCGCTATACTTGTTACCAGTGGGACATTGGCATGGAGATCAGTAATGATGTGAAGAGAGACGAAGTGAAGAAGCTTGTTGAAGAGTTAATGGAAGGAGAGAAGGGTAAGGAACTGAAAAATAAGGTCATGATGTGGAAGAAACTAGCAGAGGAGGCCTCTTCTCCGCTTGGTTCGTCAAACATAACATTGAACAATTTAGTCAATCAAGTGCTATTGAGTAAATATAGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

489

Amino Acids

54.39

Weight (kDa)

6.08

Isoelectric Point (pI)

39.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 299 - 448 1.3e-26 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 889, 1186
AccB7I CCANNNNNTGG 1 cut(s) 1127
AccI GTMKAC 1 cut(s) 555
AccII CGCG 1 cut(s) 1034
AciI CCGC 5 cut(s) 446, 1043, 1149, 1222, 1397
AclI AACGTT 1 cut(s) 157
AclWI GGATC 2 cut(s) 600, 1232
AcoI YGGCCR 1 cut(s) 1202
AcsI RAATTY 1 cut(s) 1156
AcuI CTGAAG 3 cut(s) 71, 426, 663
AfiI CCNNNNNNNGG 4 cut(s) 76, 589, 1127, 1211
AflIII ACRYGT 1 cut(s) 749
AgsI TTSAA 7 cut(s) 148, 209, 463, 823, 1161, 1313, 1423
AjnI CCWGG 1 cut(s) 605
AleI CACNNNNGTG 1 cut(s) 485
Alw21I GWGCWC 1 cut(s) 1113
Alw26I GTCTC 4 cut(s) 209, 282, 373, 1284
AlwI GGATC 2 cut(s) 600, 1232
AlwNI CAGNNNCTG 1 cut(s) 404
AoxI GGCC 4 cut(s) 229, 778, 1202, 1386
ApeKI GCWGC 2 cut(s) 522, 665
ApoI RAATTY 1 cut(s) 1156
AseI ATTAAT 1 cut(s) 267
AspLEI GCGC 1 cut(s) 1034
AspS9I GGNCC 3 cut(s) 5, 176, 779
AsuC2I CCSGG 3 cut(s) 567, 646, 1183
AsuHPI GGTGA 5 cut(s) 118, 382, 1012, 1037, 1226
AvaII GGWCC 2 cut(s) 5, 176
BalI TGGCCA 1 cut(s) 1204
BanI GGYRCC 2 cut(s) 889, 1186
Bbv12I GWGCWC 1 cut(s) 1113
BbvI GCAGC 2 cut(s) 509, 677
BccI CCATC 6 cut(s) 221, 368, 401, 864, 1125, 1129
BciT130I CCWGG 1 cut(s) 607
BcnI CCSGG 3 cut(s) 567, 646, 1183
BcoDI GTCTC 4 cut(s) 209, 282, 373, 1284
BfaI CTAG 5 cut(s) 360, 615, 738, 926, 1376
BfmI CTRYAG 2 cut(s) 21, 423
BisI GCNGC 4 cut(s) 447, 523, 666, 1043
BlsI GCNGC 4 cut(s) 448, 524, 667, 1044
Bme1390I CCNGG 4 cut(s) 567, 607, 646, 1183
Bme18I GGWCC 2 cut(s) 5, 176
BmgT120I GGNCC 3 cut(s) 5, 176, 779
BmiI GGNNCC 8 cut(s) 6, 178, 306, 564, 604, 620, 891, 1188
BmrFI CCNGG 4 cut(s) 567, 607, 646, 1183
BmrI ACTGGG 1 cut(s) 568
BmuI ACTGGG 1 cut(s) 568
BplI GAGNNNNNCTC 2 cut(s) 1373, 1405
BpmI CTGGAG 1 cut(s) 628
BpuMI CCSGG 3 cut(s) 567, 646, 1183
BsaJI CCNNGG 3 cut(s) 300, 1164, 1182
BsaWI WCCGGW 1 cut(s) 808
Bsc4I CCNNNNNNNGG 4 cut(s) 76, 589, 1127, 1211
Bse1I ACTGG 2 cut(s) 563, 1249
Bse3DI GCAATG 1 cut(s) 87
BseBI CCWGG 1 cut(s) 607
BseDI CCNNGG 3 cut(s) 300, 1164, 1182
BseGI GGATG 2 cut(s) 379, 1117
BseLI CCNNNNNNNGG 4 cut(s) 76, 589, 1127, 1211
BseMI GCAATG 1 cut(s) 87
BseMII CTCAG 4 cut(s) 612, 849, 912, 1038
BseNI ACTGG 2 cut(s) 563, 1249
BseRI GAGGAG 3 cut(s) 92, 311, 1397
BseXI GCAGC 2 cut(s) 509, 677
Bsh1236I CGCG 1 cut(s) 1034
BshFI GGCC 4 cut(s) 231, 780, 1204, 1388
BshNI GGYRCC 2 cut(s) 889, 1186
BsiHKAI GWGCWC 1 cut(s) 1113
BsiSI CCGG 4 cut(s) 566, 645, 809, 1182
BslFI GGGAC 3 cut(s) 582, 981, 1268
BslI CCNNNNNNNGG 4 cut(s) 76, 589, 1127, 1211
BsmAI GTCTC 4 cut(s) 209, 282, 373, 1284
BsmBI CGTCTC 1 cut(s) 1284
BsmFI GGGAC 3 cut(s) 582, 981, 1268
BsmI GAATGC 2 cut(s) 48, 1034
BsnI GGCC 4 cut(s) 231, 780, 1204, 1388
Bsp1286I GDGCHC 1 cut(s) 1113
Bsp143I GATC 4 cut(s) 592, 1209, 1224, 1269
Bsp19I CCATGG 1 cut(s) 1164
BspACI CCGC 5 cut(s) 446, 1043, 1149, 1222, 1397
BspANI GGCC 4 cut(s) 231, 780, 1204, 1388
BspCNI CTCAG 4 cut(s) 611, 850, 911, 1039
BspFNI CGCG 1 cut(s) 1034
BspHI TCATGA 2 cut(s) 933, 1359
BspLI GGNNCC 8 cut(s) 6, 178, 306, 564, 604, 620, 891, 1188
BspPI GGATC 2 cut(s) 600, 1232
BspQI GCTCTTC 1 cut(s) 402
BspT107I GGYRCC 2 cut(s) 889, 1186
BsrDI GCAATG 1 cut(s) 87
BsrI ACTGG 2 cut(s) 563, 1249
BssECI CCNNGG 3 cut(s) 300, 1164, 1182
BssMI GATC 4 cut(s) 592, 1209, 1224, 1269
BssT1I CCWWGG 2 cut(s) 300, 1164
Bst2UI CCWGG 1 cut(s) 607
Bst4CI ACNGT 3 cut(s) 400, 432, 1232
Bst6I CTCTTC 4 cut(s) 402, 1280, 1308, 1396
BstC8I GCNNGC 2 cut(s) 197, 866
BstDEI CTNAG 4 cut(s) 598, 858, 898, 1047
BstDSI CCRYGG 1 cut(s) 1164
BstEII GGTNACC 1 cut(s) 1214
BstF5I GGATG 2 cut(s) 379, 1117
BstFNI CGCG 1 cut(s) 1034
BstHHI GCGC 1 cut(s) 1034
BstKTI GATC 4 cut(s) 595, 1212, 1227, 1272
BstMAI GTCTC 4 cut(s) 209, 282, 373, 1284
BstMBI GATC 4 cut(s) 592, 1209, 1224, 1269
BstMWI GCNNNNNNNGC 5 cut(s) 662, 674, 713, 1201, 1385
BstNI CCWGG 1 cut(s) 607
BstNSI RCATGY 1 cut(s) 753
BstPI GGTNACC 1 cut(s) 1214
BstSCI CCNGG 4 cut(s) 565, 605, 644, 1181
BstSFI CTRYAG 2 cut(s) 21, 423
BstUI CGCG 1 cut(s) 1034
BstV1I GCAGC 2 cut(s) 509, 677
BstX2I RGATCY 1 cut(s) 592
BstXI CCANNNNNNTGG 2 cut(s) 487, 996
BstYI RGATCY 1 cut(s) 592
BsuRI GGCC 4 cut(s) 231, 780, 1204, 1388
BtgI CCRYGG 1 cut(s) 1164
BtgZI GCGATG 1 cut(s) 883
BtsCI GGATG 2 cut(s) 379, 1117
BtsI GCAGTG 1 cut(s) 663
BtsIMutI CAGTG 3 cut(s) 428, 663, 1256
Cac8I GCNNGC 2 cut(s) 197, 866
CaiI CAGNNNCTG 1 cut(s) 404
CciI TCATGA 2 cut(s) 933, 1359
CfoI GCGC 1 cut(s) 1034
Cfr13I GGNCC 3 cut(s) 5, 176, 779
CviAII CATG 8 cut(s) 38, 122, 547, 750, 934, 1165, 1264, 1360
DdeI CTNAG 4 cut(s) 598, 858, 898, 1047
DpnI GATC 4 cut(s) 594, 1211, 1226, 1271
DpnII GATC 4 cut(s) 592, 1209, 1224, 1269
DraI TTTAAA 1 cut(s) 640
EaeI YGGCCR 1 cut(s) 1202
Eam1104I CTCTTC 4 cut(s) 402, 1280, 1308, 1396
EarI CTCTTC 4 cut(s) 402, 1280, 1308, 1396
Eco130I CCWWGG 2 cut(s) 300, 1164
Eco147I AGGCCT 1 cut(s) 1388
Eco32I GATATC 1 cut(s) 580
Eco47I GGWCC 2 cut(s) 5, 176
Eco57I CTGAAG 3 cut(s) 71, 426, 663
Eco91I GGTNACC 1 cut(s) 1214
EcoO109I RGGNCCY 1 cut(s) 5
EcoO65I GGTNACC 1 cut(s) 1214
EcoRI GAATTC 1 cut(s) 1156
EcoRII CCWGG 1 cut(s) 605
EcoRV GATATC 1 cut(s) 580
EcoT14I CCWWGG 2 cut(s) 300, 1164
EcoT22I ATGCAT 1 cut(s) 50
ErhI CCWWGG 2 cut(s) 300, 1164
Esp3I CGTCTC 1 cut(s) 1284
FaeI CATG 8 cut(s) 41, 125, 550, 753, 937, 1168, 1267, 1363
FalI AAGNNNNNCTT 2 cut(s) 284, 316
FaqI GGGAC 3 cut(s) 582, 981, 1268
FatI CATG 8 cut(s) 37, 121, 546, 749, 933, 1164, 1263, 1359
FblI GTMKAC 1 cut(s) 555
Fnu4HI GCNGC 4 cut(s) 447, 523, 666, 1043
FokI GGATG 2 cut(s) 386, 1104
Fsp4HI GCNGC 4 cut(s) 447, 523, 666, 1043
FspBI CTAG 5 cut(s) 360, 615, 738, 926, 1376
GlaI GCGC 1 cut(s) 1033
GluI GCNGC 4 cut(s) 447, 523, 666, 1043
GsuI CTGGAG 1 cut(s) 628
HaeIII GGCC 4 cut(s) 231, 780, 1204, 1388
HapII CCGG 4 cut(s) 566, 645, 809, 1182
HhaI GCGC 1 cut(s) 1034
Hin1II CATG 8 cut(s) 41, 125, 550, 753, 937, 1168, 1267, 1363
Hin6I GCGC 1 cut(s) 1032
HinP1I GCGC 1 cut(s) 1032
HincII GTYRAC 1 cut(s) 136
HindII GTYRAC 1 cut(s) 136
HindIII AAGCTT 3 cut(s) 675, 755, 1304
HinfI GANTC 2 cut(s) 498, 922
HpaII CCGG 4 cut(s) 566, 645, 809, 1182
HphI GGTGA 5 cut(s) 118, 382, 1012, 1037, 1226
Hpy166II GTNNAC 6 cut(s) 136, 390, 556, 769, 842, 1097
Hpy188I TCNGA 5 cut(s) 66, 244, 373, 455, 804
Hpy188III TCNNGA 4 cut(s) 224, 382, 934, 1360
Hpy8I GTNNAC 6 cut(s) 136, 390, 556, 769, 842, 1097
HpyAV CCTTC 4 cut(s) 242, 359, 1319, 1327
HpyCH4III ACNGT 3 cut(s) 400, 432, 1232
HpyCH4IV ACGT 3 cut(s) 157, 386, 1462
HpyCH4V TGCA 2 cut(s) 48, 974
HpyF10VI GCNNNNNNNGC 5 cut(s) 662, 674, 713, 1201, 1385
HpyF3I CTNAG 4 cut(s) 598, 858, 898, 1047
HpySE526I ACGT 3 cut(s) 157, 386, 1462
Hsp92II CATG 8 cut(s) 41, 125, 550, 753, 937, 1168, 1267, 1363
HspAI GCGC 1 cut(s) 1032
Kzo9I GATC 4 cut(s) 592, 1209, 1224, 1269
LguI GCTCTTC 1 cut(s) 402
LmnI GCTCC 2 cut(s) 310, 608
Lsp1109I GCAGC 2 cut(s) 509, 677
MaeI CTAG 5 cut(s) 360, 615, 738, 926, 1376
MaeII ACGT 3 cut(s) 157, 386, 1462
MaeIII GTNAC 4 cut(s) 124, 355, 1214, 1244
MalI GATC 4 cut(s) 594, 1211, 1226, 1271
MboI GATC 4 cut(s) 592, 1209, 1224, 1269
MboII GAAGA 7 cut(s) 419, 863, 1297, 1312, 1325, 1381, 1383
MflI RGATCY 1 cut(s) 592
MhlI GDGCHC 1 cut(s) 1113
MlsI TGGCCA 1 cut(s) 1204
MluCI AATT 7 cut(s) 209, 268, 788, 913, 1087, 1156, 1426
MluNI TGGCCA 1 cut(s) 1204
MlyI GAGTC 1 cut(s) 931
MmeI TCCRAC 3 cut(s) 433, 1108, 1133
Mox20I TGGCCA 1 cut(s) 1204
Mph1103I ATGCAT 1 cut(s) 50
MscI TGGCCA 1 cut(s) 1204
MseI TTAA 6 cut(s) 165, 267, 527, 587, 639, 1319
MslI CAYNNNNRTG 4 cut(s) 53, 485, 994, 1262
Msp20I TGGCCA 1 cut(s) 1204
MspA1I CMGCKG 3 cut(s) 683, 1149, 1222
MspI CCGG 4 cut(s) 566, 645, 809, 1182
MspR9I CCNGG 4 cut(s) 567, 607, 646, 1183
Mva1269I GAATGC 2 cut(s) 48, 1034
MvaI CCWGG 1 cut(s) 607
MvnI CGCG 1 cut(s) 1034
MwoI GCNNNNNNNGC 5 cut(s) 662, 674, 713, 1201, 1385
NciI CCSGG 3 cut(s) 567, 646, 1183
NcoI CCATGG 1 cut(s) 1164
NdeII GATC 4 cut(s) 592, 1209, 1224, 1269
NlaIII CATG 8 cut(s) 41, 125, 550, 753, 937, 1168, 1267, 1363
NlaIV GGNNCC 8 cut(s) 6, 178, 306, 564, 604, 620, 891, 1188
NmuCI GTSAC 2 cut(s) 124, 1214
NsiI ATGCAT 1 cut(s) 50
NspI RCATGY 1 cut(s) 753
OliI CACNNNNGTG 1 cut(s) 485
PagI TCATGA 2 cut(s) 933, 1359
PceI AGGCCT 1 cut(s) 1388
PciI ACATGT 1 cut(s) 749
PciSI GCTCTTC 1 cut(s) 402
PctI GAATGC 2 cut(s) 48, 1034
PfeI GAWTC 1 cut(s) 498
PflMI CCANNNNNTGG 1 cut(s) 1127
PfoI TCCNGGA 2 cut(s) 565, 605
PkrI GCNGC 4 cut(s) 448, 524, 667, 1044
PleI GAGTC 1 cut(s) 930
PpsI GAGTC 1 cut(s) 930
PpuMI RGGWCCY 1 cut(s) 5
PscI ACATGT 1 cut(s) 749
PshBI ATTAAT 1 cut(s) 267
Psp1406I AACGTT 1 cut(s) 157
Psp5II RGGWCCY 1 cut(s) 5
Psp6I CCWGG 1 cut(s) 605
PspEI GGTNACC 1 cut(s) 1214
PspGI CCWGG 1 cut(s) 605
PspN4I GGNNCC 8 cut(s) 6, 178, 306, 564, 604, 620, 891, 1188
PspPI GGNCC 3 cut(s) 5, 176, 779
PspPPI RGGWCCY 1 cut(s) 5
PsrI GAACNNNNNNTAC 2 cut(s) 546, 578
PstNI CAGNNNCTG 1 cut(s) 404
PsuI RGATCY 1 cut(s) 592
PvuII CAGCTG 1 cut(s) 683
RseI CAYNNNNRTG 4 cut(s) 53, 485, 994, 1262
SapI GCTCTTC 1 cut(s) 402
SaqAI TTAA 6 cut(s) 165, 267, 527, 587, 639, 1319
SatI GCNGC 4 cut(s) 447, 523, 666, 1043
Sau3AI GATC 4 cut(s) 592, 1209, 1224, 1269
Sau96I GGNCC 3 cut(s) 5, 176, 779
SchI GAGTC 1 cut(s) 931
ScrFI CCNGG 4 cut(s) 567, 607, 646, 1183
SduI GDGCHC 1 cut(s) 1113
SfcI CTRYAG 2 cut(s) 21, 423
SinI GGWCC 2 cut(s) 5, 176
SmiMI CAYNNNNRTG 4 cut(s) 53, 485, 994, 1262
Sse9I AATT 7 cut(s) 209, 268, 788, 913, 1087, 1156, 1426
SseBI AGGCCT 1 cut(s) 1388
SsiI CCGC 5 cut(s) 446, 1043, 1149, 1222, 1397
SspMI CTAG 5 cut(s) 360, 615, 738, 926, 1376
StuI AGGCCT 1 cut(s) 1388
StyD4I CCNGG 4 cut(s) 565, 605, 644, 1181
StyI CCWWGG 2 cut(s) 300, 1164
TaaI ACNGT 3 cut(s) 400, 432, 1232
TaiI ACGT 3 cut(s) 160, 389, 1465
TasI AATT 7 cut(s) 209, 268, 788, 913, 1087, 1156, 1426
TauI GCSGC 2 cut(s) 449, 1045
TfiI GAWTC 1 cut(s) 498
Tru1I TTAA 6 cut(s) 165, 267, 527, 587, 639, 1319
Tru9I TTAA 6 cut(s) 165, 267, 527, 587, 639, 1319
TscAI CASTG 3 cut(s) 435, 663, 1256
TseFI GTSAC 2 cut(s) 124, 1214
TseI GCWGC 2 cut(s) 522, 665
Tsp45I GTSAC 2 cut(s) 124, 1214
TspDTI ATGAA 5 cut(s) 110, 261, 359, 549, 683
TspGWI ACGGA 3 cut(s) 297, 572, 859
TspRI CASTG 3 cut(s) 435, 663, 1256
Van91I CCANNNNNTGG 1 cut(s) 1127
VpaK11BI GGWCC 2 cut(s) 5, 176
VspI ATTAAT 1 cut(s) 267
XapI RAATTY 1 cut(s) 1156
XceI RCATGY 1 cut(s) 753
XcmI CCANNNNNNNNNTGG 2 cut(s) 1124, 1256
XmiI GTMKAC 1 cut(s) 555
XspI CTAG 5 cut(s) 360, 615, 738, 926, 1376
Zsp2I ATGCAT 1 cut(s) 50
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.