RLG00000020447

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000097
Physical Location & Seq
Forward (+)
65137226 .. 65138984
1759 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020447

Sequence Viewer

Length: 1554 bp
ATGTATTACAAACGAACAAAACCCTACAGCGTTGTTATCAGTATAAAGCAGAGCATTTTCTGCATGTGTAGCGCACATTCGTACACACAAGATAAGATGAGTTCCAAGGTCGAAGTAGCTAAAAGGCCTCATGCAGTATGCGTTCCACTGCCGTTTCAAAGCCATATCAAGGCAATGCTCAAACTAGCAAAACTCCTCCACCACAGAGGTCTTCATATAACCTTTGTCAACACACTGTTCAACCACAAACGCTTTCTTCAATCTCTAGGACCTGACTCCCTTGATGGCTTGCCTGATTTTCGGTTCGAAACCATTCCAGATGGCCTTCCAAGTTCAGATGAAGATGTGACGCAAGACGTCTATTTGCTTTGTGATGCTGTCAGGAAAAATTTGTTAGCTCCGTTTCAAGACCTCCTCATGAAACTCAATGAAGCTGCAATTACTTCCCACAGTACTAATCCTCCGGTGACTCGGATAGTAGCAGACGGTTGGAATCCCTTTGTCTTCACAGCAGCAGAAACAAATCGAATCCCTGTTACACTCTTATTTACTGTTGCTGCAAGCAGCTTCATGGGATTTGCACAATATCCCACTTTGATGGAAAAAGGATTAGCACCACTCAAGGATGAGAGCTGTTTCACAAACGGGTATTTGGACAAGGTCATAGAATGGATTCCAGGACTGAAAGATATCCGGTTAAGGGATCTCCCGACCAACTTTCAAGTCACAAATCCTGATGACGCCATCTGGAACCTCTGCTTGGAAGCAATTGAAGGTGTTCATAAAGCTGAAGCTGTTGTTCTTCATACTTTTGATGCATTGGAGCATCATGTTTTGGAATCTCTCTCGTCGATGCTTCATCCACAAGTTTATGCCATTGGCCCTCTCCAATTACTCCTTAAGCATATACCAGAACACCCTTTGAACCCTATGGGTTACAGTCTATGGAAAGAAGAAACCGAGTGCCTCCAATGGCTCAACTCCAAGGCGCCAAGTACGGTTGTTTATGTGAACTTTGGCAGTTTAACGATCACGACATTGAACAATCTTGTAGAGTTTGCTTGGGGACTTGCAAATACCAAGCTTCCCTTCTTTTGGGTAATTAGACCTGATTTAGTTGCTGGTGAATCGGCTATTTTGCCACCAGAGTTTGTGGCTGAAACCAAACAAAGAGGTCTAATAGCAAGTTGGTGCCCACAAGAGCAAGTGCTTAACCACCCAGCAGTTGGGGGATTTTTAACCCACAGCGGGTGGAATTCAATGATTGAGAGTGTGACTGCAGGAGTGCCGATGCTGTGCTGGCCAGTCTTTGGGGACCAACAAACAAATACCTGGTCTGCTTGCAATGAATGGGGAATTGGCATTGAGATCGCCGGTAACGAAGTGAAGAGAGACGAAATAGAAAAGCTTGTTAAACAGGTGATGGAGGGCGAGAAGGGTAAACATATGAGAAATAAAGTGATGGAATGGAAGCTACTTGCAGAAGAAGCAACCACTCCACATGGTTCTTCATCCACAAACTTGGATAAATTAGTGAGTCAAATATTACTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

518

Amino Acids

57.94

Weight (kDa)

5.95

Isoelectric Point (pI)

42.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 321 - 481 2.2e-25 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 360
AccB1I GGYRCC 2 cut(s) 988, 1191
AccB7I CCANNNNNTGG 2 cut(s) 1226, 1310
AciI CCGC 1 cut(s) 1248
AclWI GGATC 1 cut(s) 711
AcoI YGGCCR 1 cut(s) 1301
AcsI RAATTY 2 cut(s) 388, 1255
AcuI CTGAAG 1 cut(s) 810
AcyI GRCGYC 3 cut(s) 357, 741, 989
AfaI GTAC 3 cut(s) 83, 454, 997
AfiI CCNNNNNNNGG 7 cut(s) 169, 700, 760, 1095, 1226, 1248, 1310
AflII CTTAAG 1 cut(s) 899
AgsI TTSAA 9 cut(s) 158, 241, 260, 407, 722, 773, 925, 1042, 1260
AjnI CCWGG 2 cut(s) 676, 1331
AjuI GAANNNNNNNTTGG 6 cut(s) 743, 775, 1073, 1105, 1341, 1373
Alw26I GTCTC 1 cut(s) 1386
AlwI GGATC 1 cut(s) 711
AoxI GGCC 4 cut(s) 125, 322, 880, 1301
ApeKI GCWGC 4 cut(s) 434, 512, 557, 564
ApoI RAATTY 2 cut(s) 388, 1255
ArsI GACNNNNNNTTYG 2 cut(s) 1319, 1351
Asp700I GAANNNNTTC 3 cut(s) 312, 672, 777
AspLEI GCGC 2 cut(s) 74, 991
AspS9I GGNCC 3 cut(s) 269, 881, 1315
AsuHPI GGTGA 3 cut(s) 478, 1136, 1432
AsuII TTCGAA 1 cut(s) 306
AvaII GGWCC 2 cut(s) 269, 1315
BaeGI GKGCMC 1 cut(s) 1196
BalI TGGCCA 1 cut(s) 1303
BanI GGYRCC 2 cut(s) 988, 1191
BbsI GAAGAC 2 cut(s) 203, 496
BbvI GCAGC 4 cut(s) 421, 524, 544, 576
BccI CCATC 6 cut(s) 278, 314, 592, 752, 1417, 1456
BceAI ACGGC 1 cut(s) 136
BcgI CGANNNNNNTGC 2 cut(s) 1351, 1385
BciT130I CCWGG 2 cut(s) 678, 1333
BcoDI GTCTC 1 cut(s) 1386
BfaI CTAG 2 cut(s) 185, 266
BfmI CTRYAG 2 cut(s) 25, 1278
BfoI RGCGCY 1 cut(s) 992
BfrI CTTAAG 1 cut(s) 899
BisI GCNGC 4 cut(s) 435, 513, 558, 565
BlsI GCNGC 4 cut(s) 436, 514, 559, 566
BmcAI AGTACT 1 cut(s) 454
Bme1390I CCNGG 2 cut(s) 678, 1333
Bme18I GGWCC 2 cut(s) 269, 1315
BmgT120I GGNCC 3 cut(s) 269, 881, 1315
BmiI GGNNCC 4 cut(s) 752, 990, 1193, 1316
BmrFI CCNGG 2 cut(s) 678, 1333
BmsI GCATC 5 cut(s) 364, 805, 835, 843, 1281
BpiI GAAGAC 2 cut(s) 203, 496
Bpu14I TTCGAA 1 cut(s) 306
BpuEI CTTGAG 1 cut(s) 605
BsaHI GRCGYC 3 cut(s) 357, 741, 989
BsaJI CCNNGG 2 cut(s) 105, 984
BsaWI WCCGGW 2 cut(s) 463, 693
BsaXI ACNNNNNCTCC 2 cut(s) 445, 475
Bsc4I CCNNNNNNNGG 7 cut(s) 169, 700, 760, 1095, 1226, 1248, 1310
Bse118I RCCGGY 1 cut(s) 1373
Bse1I ACTGG 1 cut(s) 1304
Bse3DI GCAATG 2 cut(s) 180, 1351
BseBI CCWGG 2 cut(s) 678, 1333
BseDI CCNNGG 2 cut(s) 105, 984
BseGI GGATG 3 cut(s) 631, 859, 1511
BseLI CCNNNNNNNGG 7 cut(s) 169, 700, 760, 1095, 1226, 1248, 1310
BseMI GCAATG 2 cut(s) 180, 1351
BseNI ACTGG 1 cut(s) 1304
BseRI GAGGAG 2 cut(s) 185, 404
BseSI GKGCMC 1 cut(s) 1196
BseXI GCAGC 4 cut(s) 421, 524, 544, 576
BseYI CCCAGC 1 cut(s) 1219
BshFI GGCC 4 cut(s) 127, 324, 882, 1303
BshNI GGYRCC 2 cut(s) 988, 1191
BsiSI CCGG 3 cut(s) 464, 694, 1374
BslFI GGGAC 2 cut(s) 1080, 1328
BslI CCNNNNNNNGG 7 cut(s) 169, 700, 760, 1095, 1226, 1248, 1310
BsmAI GTCTC 1 cut(s) 1386
BsmBI CGTCTC 1 cut(s) 1386
BsmFI GGGAC 2 cut(s) 1080, 1328
BsnI GGCC 4 cut(s) 127, 324, 882, 1303
Bsp119I TTCGAA 1 cut(s) 306
Bsp1286I GDGCHC 1 cut(s) 1196
Bsp143I GATC 3 cut(s) 703, 1029, 1368
BspACI CCGC 1 cut(s) 1248
BspANI GGCC 4 cut(s) 127, 324, 882, 1303
BspHI TCATGA 1 cut(s) 417
BspLI GGNNCC 4 cut(s) 752, 990, 1193, 1316
BspMAI CTGCAG 1 cut(s) 1282
BspPI GGATC 1 cut(s) 711
BspT104I TTCGAA 1 cut(s) 306
BspT107I GGYRCC 2 cut(s) 988, 1191
BspTI CTTAAG 1 cut(s) 899
BsrDI GCAATG 2 cut(s) 180, 1351
BsrFI RCCGGY 1 cut(s) 1373
BsrI ACTGG 1 cut(s) 1304
BssAI RCCGGY 1 cut(s) 1373
BssECI CCNNGG 2 cut(s) 105, 984
BssMI GATC 3 cut(s) 703, 1029, 1368
BssNI GRCGYC 3 cut(s) 357, 741, 989
BssT1I CCWWGG 2 cut(s) 105, 984
Bst2UI CCWGG 2 cut(s) 678, 1333
Bst4CI ACNGT 6 cut(s) 237, 452, 488, 553, 941, 1000
Bst6I CTCTTC 1 cut(s) 1382
BstACI GRCGYC 3 cut(s) 357, 741, 989
BstAFI CTTAAG 1 cut(s) 899
BstAPI GCANNNNNTGC 1 cut(s) 60
BstBI TTCGAA 1 cut(s) 306
BstC8I GCNNGC 4 cut(s) 290, 562, 1301, 1342
BstF5I GGATG 3 cut(s) 631, 859, 1511
BstH2I RGCGCY 1 cut(s) 992
BstHHI GCGC 2 cut(s) 74, 991
BstKTI GATC 3 cut(s) 706, 1032, 1371
BstMAI GTCTC 1 cut(s) 1386
BstMBI GATC 3 cut(s) 703, 1029, 1368
BstMWI GCNNNNNNNGC 4 cut(s) 60, 69, 1300, 1487
BstNI CCWGG 2 cut(s) 678, 1333
BstNSI RCATGY 1 cut(s) 67
BstSCI CCNGG 2 cut(s) 676, 1331
BstSFI CTRYAG 2 cut(s) 25, 1278
BstSLI GKGCMC 1 cut(s) 1196
BstV1I GCAGC 4 cut(s) 421, 524, 544, 576
BstV2I GAAGAC 2 cut(s) 203, 496
BstX2I RGATCY 1 cut(s) 703
BstXI CCANNNNNNTGG 2 cut(s) 598, 1522
BstYI RGATCY 1 cut(s) 703
BsuRI GGCC 4 cut(s) 127, 324, 882, 1303
BtsCI GGATG 3 cut(s) 631, 859, 1511
BtsI GCAGTG 1 cut(s) 146
BtsIMutI CAGTG 2 cut(s) 146, 233
Cac8I GCNNGC 4 cut(s) 290, 562, 1301, 1342
CciI TCATGA 1 cut(s) 417
CfoI GCGC 2 cut(s) 74, 991
Cfr10I RCCGGY 1 cut(s) 1373
Cfr13I GGNCC 3 cut(s) 269, 881, 1315
CseI GACGC 2 cut(s) 358, 749
CsiI ACCWGGT 1 cut(s) 1331
Csp6I GTAC 3 cut(s) 82, 453, 996
CviAII CATG 6 cut(s) 64, 131, 418, 571, 830, 1502
CviQI GTAC 3 cut(s) 82, 453, 996
DinI GGCGCC 1 cut(s) 990
DpnI GATC 3 cut(s) 705, 1031, 1370
DpnII GATC 3 cut(s) 703, 1029, 1368
EaeI YGGCCR 1 cut(s) 1301
Eam1104I CTCTTC 1 cut(s) 1382
EarI CTCTTC 1 cut(s) 1382
Eco130I CCWWGG 2 cut(s) 105, 984
Eco147I AGGCCT 1 cut(s) 127
Eco32I GATATC 1 cut(s) 691
Eco47I GGWCC 2 cut(s) 269, 1315
Eco57I CTGAAG 1 cut(s) 810
EcoO109I RGGNCCY 1 cut(s) 269
EcoRI GAATTC 1 cut(s) 1255
EcoRII CCWGG 2 cut(s) 676, 1331
EcoRV GATATC 1 cut(s) 691
EcoT14I CCWWGG 2 cut(s) 105, 984
EcoT22I ATGCAT 1 cut(s) 820
EgeI GGCGCC 1 cut(s) 990
EheI GGCGCC 1 cut(s) 990
ErhI CCWWGG 2 cut(s) 105, 984
Esp3I CGTCTC 1 cut(s) 1386
FaeI CATG 6 cut(s) 67, 134, 421, 574, 833, 1505
FalI AAGNNNNNCTT 2 cut(s) 1073, 1105
FaqI GGGAC 2 cut(s) 1080, 1328
FatI CATG 6 cut(s) 63, 130, 417, 570, 829, 1501
FauI CCCGC 1 cut(s) 1241
FauNDI CATATG 1 cut(s) 1446
Fnu4HI GCNGC 4 cut(s) 435, 513, 558, 565
FokI GGATG 3 cut(s) 638, 846, 1498
Fsp4HI GCNGC 4 cut(s) 435, 513, 558, 565
FspBI CTAG 2 cut(s) 185, 266
GlaI GCGC 2 cut(s) 73, 990
GluI GCNGC 4 cut(s) 435, 513, 558, 565
GsaI CCCAGC 1 cut(s) 1223
HaeII RGCGCY 1 cut(s) 992
HaeIII GGCC 4 cut(s) 127, 324, 882, 1303
HapII CCGG 3 cut(s) 464, 694, 1374
HgaI GACGC 2 cut(s) 358, 749
HhaI GCGC 2 cut(s) 74, 991
Hin1I GRCGYC 3 cut(s) 357, 741, 989
Hin1II CATG 6 cut(s) 67, 134, 421, 574, 833, 1505
Hin6I GCGC 2 cut(s) 72, 989
HinP1I GCGC 2 cut(s) 72, 989
HincII GTYRAC 1 cut(s) 229
HindII GTYRAC 1 cut(s) 229
HindIII AAGCTT 2 cut(s) 1082, 1406
HinfI GANTC 8 cut(s) 275, 469, 493, 528, 673, 839, 1127, 1537
HpaII CCGG 3 cut(s) 464, 694, 1374
HphI GGTGA 3 cut(s) 478, 1136, 1432
Hpy166II GTNNAC 4 cut(s) 84, 229, 1012, 1442
Hpy188I TCNGA 2 cut(s) 337, 474
Hpy188III TCNNGA 8 cut(s) 317, 382, 407, 418, 709, 734, 748, 1033
Hpy8I GTNNAC 4 cut(s) 84, 229, 1012, 1442
Hpy99I CGWCG 1 cut(s) 853
HpyAV CCTTC 4 cut(s) 335, 767, 1099, 1429
HpyCH4III ACNGT 6 cut(s) 237, 452, 488, 553, 941, 1000
HpyCH4IV ACGT 1 cut(s) 357
HpyF10VI GCNNNNNNNGC 4 cut(s) 60, 69, 1300, 1487
HpySE526I ACGT 1 cut(s) 357
Hsp92I GRCGYC 3 cut(s) 357, 741, 989
Hsp92II CATG 6 cut(s) 67, 134, 421, 574, 833, 1505
HspAI GCGC 2 cut(s) 72, 989
KasI GGCGCC 1 cut(s) 988
Kzo9I GATC 3 cut(s) 703, 1029, 1368
LmnI GCTCC 2 cut(s) 403, 823
Lsp1109I GCAGC 4 cut(s) 421, 524, 544, 576
LweI GCATC 5 cut(s) 364, 805, 835, 843, 1281
MabI ACCWGGT 1 cut(s) 1331
MaeI CTAG 2 cut(s) 185, 266
MaeII ACGT 1 cut(s) 357
MaeIII GTNAC 7 cut(s) 346, 466, 535, 724, 935, 1273, 1376
MalI GATC 3 cut(s) 705, 1031, 1370
MboI GATC 3 cut(s) 703, 1029, 1368
MboII GAAGA 9 cut(s) 203, 248, 353, 496, 794, 965, 1399, 1496, 1500
MfeI CAATTG 1 cut(s) 768
MflI RGATCY 1 cut(s) 703
MhlI GDGCHC 1 cut(s) 1196
MlsI TGGCCA 1 cut(s) 1303
MluCI AATT 8 cut(s) 388, 438, 768, 890, 1101, 1255, 1356, 1529
MluNI TGGCCA 1 cut(s) 1303
Mly113I GGCGCC 1 cut(s) 989
MlyI GAGTC 3 cut(s) 269, 463, 1546
MmeI TCCRAC 1 cut(s) 470
Mox20I TGGCCA 1 cut(s) 1303
Mph1103I ATGCAT 1 cut(s) 820
MroXI GAANNNNTTC 3 cut(s) 312, 672, 777
MscI TGGCCA 1 cut(s) 1303
MseI TTAA 6 cut(s) 698, 900, 1025, 1212, 1238, 1413
MslI CAYNNNNRTG 1 cut(s) 596
Msp20I TGGCCA 1 cut(s) 1303
MspA1I CMGCKG 1 cut(s) 1248
MspCI CTTAAG 1 cut(s) 899
MspI CCGG 3 cut(s) 464, 694, 1374
MspR9I CCNGG 2 cut(s) 678, 1333
MunI CAATTG 1 cut(s) 768
MvaI CCWGG 2 cut(s) 678, 1333
MwoI GCNNNNNNNGC 4 cut(s) 60, 69, 1300, 1487
NarI GGCGCC 1 cut(s) 989
NdeI CATATG 1 cut(s) 1446
NdeII GATC 3 cut(s) 703, 1029, 1368
NlaIII CATG 6 cut(s) 67, 134, 421, 574, 833, 1505
NlaIV GGNNCC 4 cut(s) 752, 990, 1193, 1316
NmuCI GTSAC 4 cut(s) 346, 466, 724, 1273
NsiI ATGCAT 1 cut(s) 820
NspI RCATGY 1 cut(s) 67
NspV TTCGAA 1 cut(s) 306
PagI TCATGA 1 cut(s) 417
PceI AGGCCT 1 cut(s) 127
PcsI WCGNNNNNNNCGW 1 cut(s) 1377
PdmI GAANNNNTTC 3 cut(s) 312, 672, 777
PfeI GAWTC 5 cut(s) 493, 528, 673, 839, 1127
PflFI GACNNNGTC 1 cut(s) 659
PflMI CCANNNNNTGG 2 cut(s) 1226, 1310
PfoI TCCNGGA 1 cut(s) 676
PkrI GCNGC 4 cut(s) 436, 514, 559, 566
PleI GAGTC 3 cut(s) 269, 463, 1545
PluTI GGCGCC 1 cut(s) 992
PpsI GAGTC 3 cut(s) 269, 463, 1545
PpuMI RGGWCCY 1 cut(s) 269
Psp5II RGGWCCY 1 cut(s) 269
Psp6I CCWGG 2 cut(s) 676, 1331
PspFI CCCAGC 1 cut(s) 1219
PspGI CCWGG 2 cut(s) 676, 1331
PspN4I GGNNCC 4 cut(s) 752, 990, 1193, 1316
PspPI GGNCC 3 cut(s) 269, 881, 1315
PspPPI RGGWCCY 1 cut(s) 269
PstI CTGCAG 1 cut(s) 1282
PsuI RGATCY 1 cut(s) 703
PsyI GACNNNGTC 1 cut(s) 659
RsaI GTAC 3 cut(s) 83, 454, 997
RsaNI GTAC 3 cut(s) 82, 453, 996
RseI CAYNNNNRTG 1 cut(s) 596
SaqAI TTAA 6 cut(s) 698, 900, 1025, 1212, 1238, 1413
SatI GCNGC 4 cut(s) 435, 513, 558, 565
Sau3AI GATC 3 cut(s) 703, 1029, 1368
Sau96I GGNCC 3 cut(s) 269, 881, 1315
ScaI AGTACT 1 cut(s) 454
SchI GAGTC 3 cut(s) 269, 463, 1546
ScrFI CCNGG 2 cut(s) 678, 1333
SduI GDGCHC 1 cut(s) 1196
SexAI ACCWGGT 1 cut(s) 1331
SfaNI GCATC 5 cut(s) 364, 805, 835, 843, 1281
SfcI CTRYAG 2 cut(s) 25, 1278
SfoI GGCGCC 1 cut(s) 990
SfuI TTCGAA 1 cut(s) 306
SinI GGWCC 2 cut(s) 269, 1315
SmiMI CAYNNNNRTG 1 cut(s) 596
SmlI CTYRAG 2 cut(s) 620, 899
SmoI CTYRAG 2 cut(s) 620, 899
Sse9I AATT 8 cut(s) 388, 438, 768, 890, 1101, 1255, 1356, 1529
SseBI AGGCCT 1 cut(s) 127
SsiI CCGC 1 cut(s) 1248
SspDI GGCGCC 1 cut(s) 988
SspI AATATT 1 cut(s) 1545
SspMI CTAG 2 cut(s) 185, 266
StuI AGGCCT 1 cut(s) 127
StyD4I CCNGG 2 cut(s) 676, 1331
StyI CCWWGG 2 cut(s) 105, 984
TaaI ACNGT 6 cut(s) 237, 452, 488, 553, 941, 1000
TaiI ACGT 1 cut(s) 360
TaqI TCGA 4 cut(s) 111, 306, 526, 851
TasI AATT 8 cut(s) 388, 438, 768, 890, 1101, 1255, 1356, 1529
TatI WGTACW 1 cut(s) 452
TfiI GAWTC 5 cut(s) 493, 528, 673, 839, 1127
Tru1I TTAA 6 cut(s) 698, 900, 1025, 1212, 1238, 1413
Tru9I TTAA 6 cut(s) 698, 900, 1025, 1212, 1238, 1413
TscAI CASTG 2 cut(s) 153, 240
TseFI GTSAC 4 cut(s) 346, 466, 724, 1273
TseI GCWGC 4 cut(s) 434, 512, 557, 564
Tsp45I GTSAC 4 cut(s) 346, 466, 724, 1273
TspGWI ACGGA 1 cut(s) 390
TspRI CASTG 2 cut(s) 153, 240
Tth111I GACNNNGTC 1 cut(s) 659
Van91I CCANNNNNTGG 2 cut(s) 1226, 1310
Vha464I CTTAAG 1 cut(s) 899
VpaK11BI GGWCC 2 cut(s) 269, 1315
XapI RAATTY 2 cut(s) 388, 1255
XceI RCATGY 1 cut(s) 67
XcmI CCANNNNNNNNNTGG 1 cut(s) 1223
XmnI GAANNNNTTC 3 cut(s) 312, 672, 777
XspI CTAG 2 cut(s) 185, 266
ZraI GACGTC 1 cut(s) 358
ZrmI AGTACT 1 cut(s) 454
Zsp2I ATGCAT 1 cut(s) 820
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.