RchiOBHm_Chr7g0211221

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000097
Physical Location & Seq
Reverse (-)
28470492 .. 28474618
4127 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18896

Sequence Viewer

Length: 1452 bp
ATGGCTTCTAAGAAGCCTCATGCTGTGTGTATTCCAGCTCCGTCTCTAGGCCACATAAAGGCAGTGCTTAAACTAGCAAAACTCCTACACCATAAAGGCTTTCATATAACCTTTGTCAACACAGAGTCATTTCACAAGCGCTATCTTAAATCTTTAGGCCCCAACTCCTTAGATGGTCTCCCCGATTTTCAGTTTGAAACCATTCCGGATGGCTTACCAGATTCTGATGCTGATCCCATGAGCTTGCTATGTGAAAACAAACATATGAAAACTTTGTTGCCTCCCTTTCGCGGCCTCCTCACAAAACTCAACAATGATTTTACTAATCCTCCAGTGACTTGCATTGTTTCAGATGGTTTCTTGTGGATGTTCACCATTGCAGCTGCTCAAGAAATTGGGGTCCCCATAGTGCTCTTCGAAACTATTGCTGCAACAACGTTCATGGCATTCAAACAGTTTCGCACTTTGGTCCAAAAAGGGCTTGTACCACTCAAAGATGAGGGCTGTTTCACAAATGGATTTTTGGACAAAGTGATAGACATGGTTCCGGGAATGAAAGATATTCGTTTAAAGGATCTCCCAACCTTTATTCGAACTACAGATCCAAATGACACCATGCTTAACTTTTTCATGGAAACAGTGGATAACGTTCACAAAGCATCGGCAGTTGTATTTCCTACTTTTGATGCTTTGGAACAAGTTGTGTTGGATGCTTTCTCATCTATGTTTGATCAGTCACTTATTTATGCAATTGGTCCCATGCAGTTACTTCTCAATCAGATGCCTAATGACCCCTTAAAGCATATTGAATGTAGTCTATGGAAAGAAGAATCTGAGTGCCTCCAATGGCTAAATTCTAAGGTGCCGAATTCAGTTGTGTATGTGAATTTTGGTAGTGTAGCATTCTTGACACCAAAACAGCTAGTAGAATTTGGTTGGGGACTTGCAAATTCAAAGCTTCCATTCATGTGGGTTATTAGGCCTGGTTTGGTAATGGGCGAATCAGCAACTTTGCCACCTGAGTTTGTAGCTGAAACCAAAGAAAGAGGTCTGATAGTGAGTTGGTGTCCACAGGAGGAAGTCCTTAATCACCCATCAGTTGGAGGGTTTCTAACACACTGCGGTTGGCATTCAACCATGGAGAGTCTGACTGCTGGAGTGCCTATGATCTGTTGGCCATTCTTTACAGACCAGCAAACAAACTGTTACAAGATTTGTAAAGAATGGGGCATAGGAATGGAGATCGGTAGTGATGTGAAGAGAGACGAAGTTCAAAAGCTCGTTAAAGAGATAATGGAGGGAGAGAAGGGTAAGACTATGAGAAAAAACATCTTGGAATGGAAGAAGCTTGCAGAAGAAGCAACTGCTCCGCATGGGTCTTCATTCGAAAATCTAGACATTCTAGTGAATCAAGTTCTACTACGAAAAAGAGAAGGCCGGGCAGGTGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

483

Amino Acids

54.15

Weight (kDa)

5.94

Isoelectric Point (pI)

38.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 268 - 441 2.2e-27 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1433
Acc36I ACCTGC 1 cut(s) 1433
AccB1I GGYRCC 1 cut(s) 862
AccB7I CCANNNNNTGG 1 cut(s) 1100
AccII CGCG 1 cut(s) 291
AccIII TCCGGA 1 cut(s) 205
AciI CCGC 3 cut(s) 291, 1122, 1370
AclI AACGTT 2 cut(s) 437, 648
AclWI GGATC 3 cut(s) 227, 582, 596
AcoI YGGCCR 1 cut(s) 1175
AcsI RAATTY 5 cut(s) 853, 868, 886, 929, 949
AfaI GTAC 1 cut(s) 486
AfeI AGCGCT 1 cut(s) 140
AfiI CCNNNNNNNGG 4 cut(s) 47, 58, 290, 1100
AgsI TTSAA 6 cut(s) 197, 451, 809, 954, 1134, 1274
AjnI CCWGG 1 cut(s) 982
AloI GAACNNNNNNTCC 2 cut(s) 586, 618
AluBI AGCT 8 cut(s) 38, 243, 383, 922, 958, 1031, 1279, 1348
AluI AGCT 8 cut(s) 38, 243, 383, 922, 958, 1031, 1279, 1348
Alw21I GWGCWC 1 cut(s) 414
Alw26I GTCTC 3 cut(s) 48, 182, 1257
AlwI GGATC 3 cut(s) 227, 582, 596
AlwNI CAGNNNCTG 1 cut(s) 224
Aor13HI TCCGGA 1 cut(s) 205
Aor51HI AGCGCT 1 cut(s) 140
AoxI GGCC 6 cut(s) 49, 157, 292, 980, 1175, 1435
ApeKI GCWGC 3 cut(s) 380, 383, 428
ApoI RAATTY 5 cut(s) 853, 868, 886, 929, 949
Asp700I GAANNNNTTC 1 cut(s) 201
AspLEI GCGC 1 cut(s) 141
AspS9I GGNCC 4 cut(s) 158, 400, 469, 755
AsuC2I CCSGG 2 cut(s) 549, 1439
AsuHPI GGTGA 2 cut(s) 364, 1082
AsuII TTCGAA 3 cut(s) 417, 592, 1386
AvaII GGWCC 3 cut(s) 400, 469, 755
BalI TGGCCA 1 cut(s) 1177
BanI GGYRCC 1 cut(s) 862
BbsI GAAGAC 1 cut(s) 1371
Bbv12I GWGCWC 1 cut(s) 414
BbvI GCAGC 3 cut(s) 370, 392, 415
BccI CCATC 4 cut(s) 167, 203, 347, 1102
BcgI CGANNNNNNTGC 2 cut(s) 407, 441
BciT130I CCWGG 1 cut(s) 984
BclI TGATCA 1 cut(s) 730
BcnI CCSGG 2 cut(s) 549, 1439
BcoDI GTCTC 3 cut(s) 48, 182, 1257
BfaI CTAG 5 cut(s) 47, 74, 923, 1394, 1403
BfmI CTRYAG 1 cut(s) 597
BfoI RGCGCY 1 cut(s) 142
BfuAI ACCTGC 1 cut(s) 1433
BisI GCNGC 4 cut(s) 292, 381, 384, 429
BlsI GCNGC 4 cut(s) 293, 382, 385, 430
Bme1390I CCNGG 3 cut(s) 549, 984, 1439
Bme18I GGWCC 3 cut(s) 400, 469, 755
BmgT120I GGNCC 4 cut(s) 158, 400, 469, 755
BmiI GGNNCC 6 cut(s) 160, 401, 402, 546, 757, 864
BmrFI CCNGG 3 cut(s) 549, 984, 1439
BmsI GCATC 5 cut(s) 217, 668, 676, 700, 771
BpiI GAAGAC 1 cut(s) 1371
BpmI CTGGAG 2 cut(s) 315, 1176
Bpu14I TTCGAA 3 cut(s) 417, 592, 1386
BpuEI CTTGAG 1 cut(s) 372
BpuMI CCSGG 2 cut(s) 549, 1439
BsaBI GATNNNNATC 1 cut(s) 231
BsaI GGTCTC 1 cut(s) 182
BsaJI CCNNGG 1 cut(s) 1137
BsaWI WCCGGW 1 cut(s) 205
BsaXI ACNNNNNCTCC 2 cut(s) 313, 343
Bsc4I CCNNNNNNNGG 4 cut(s) 47, 58, 290, 1100
Bse1I ACTGG 1 cut(s) 332
Bse3DI GCAATG 1 cut(s) 375
Bse8I GATNNNNATC 1 cut(s) 231
BseAI TCCGGA 1 cut(s) 205
BseBI CCWGG 1 cut(s) 984
BseDI CCNNGG 1 cut(s) 1137
BseGI GGATG 3 cut(s) 214, 372, 715
BseJI GATNNNNATC 1 cut(s) 231
BseLI CCNNNNNNNGG 4 cut(s) 47, 58, 290, 1100
BseMI GCAATG 1 cut(s) 375
BseMII CTCAG 2 cut(s) 825, 1011
BseNI ACTGG 1 cut(s) 332
BseRI GAGGAG 1 cut(s) 287
BseXI GCAGC 3 cut(s) 370, 392, 415
Bsh1236I CGCG 1 cut(s) 291
BshFI GGCC 6 cut(s) 51, 159, 294, 982, 1177, 1437
BshNI GGYRCC 1 cut(s) 862
BsiHKAI GWGCWC 1 cut(s) 414
BsiSI CCGG 3 cut(s) 206, 548, 1438
BslFI GGGAC 3 cut(s) 386, 741, 954
BslI CCNNNNNNNGG 4 cut(s) 47, 58, 290, 1100
BsmAI GTCTC 3 cut(s) 48, 182, 1257
BsmBI CGTCTC 2 cut(s) 48, 1257
BsmFI GGGAC 3 cut(s) 386, 741, 954
BsmI GAATGC 3 cut(s) 446, 902, 1129
BsnI GGCC 6 cut(s) 51, 159, 294, 982, 1177, 1437
Bso31I GGTCTC 1 cut(s) 182
Bsp119I TTCGAA 3 cut(s) 417, 592, 1386
Bsp1286I GDGCHC 1 cut(s) 414
Bsp13I TCCGGA 1 cut(s) 205
Bsp143I GATC 6 cut(s) 232, 574, 601, 730, 1167, 1242
Bsp19I CCATGG 1 cut(s) 1137
BspACI CCGC 3 cut(s) 291, 1122, 1370
BspANI GGCC 6 cut(s) 51, 159, 294, 982, 1177, 1437
BspCNI CTCAG 2 cut(s) 826, 1012
BspEI TCCGGA 1 cut(s) 205
BspFNI CGCG 1 cut(s) 291
BspLI GGNNCC 6 cut(s) 160, 401, 402, 546, 757, 864
BspMI ACCTGC 1 cut(s) 1433
BspPI GGATC 3 cut(s) 227, 582, 596
BspQI GCTCTTC 1 cut(s) 419
BspT104I TTCGAA 3 cut(s) 417, 592, 1386
BspT107I GGYRCC 1 cut(s) 862
BspTNI GGTCTC 1 cut(s) 182
BsrDI GCAATG 1 cut(s) 375
BsrI ACTGG 1 cut(s) 332
BssECI CCNNGG 1 cut(s) 1137
BssMI GATC 6 cut(s) 232, 574, 601, 730, 1167, 1242
BssT1I CCWWGG 1 cut(s) 1137
Bst2UI CCWGG 1 cut(s) 984
Bst4CI ACNGT 3 cut(s) 456, 640, 1205
Bst6I CTCTTC 2 cut(s) 419, 1253
BstBI TTCGAA 3 cut(s) 417, 592, 1386
BstC8I GCNNGC 2 cut(s) 245, 1350
BstDEI CTNAG 5 cut(s) 9, 169, 834, 858, 1020
BstDSI CCRYGG 1 cut(s) 1137
BstF5I GGATG 3 cut(s) 214, 372, 715
BstFNI CGCG 1 cut(s) 291
BstH2I RGCGCY 1 cut(s) 142
BstHHI GCGC 1 cut(s) 141
BstKTI GATC 6 cut(s) 235, 577, 604, 733, 1170, 1245
BstMAI GTCTC 3 cut(s) 48, 182, 1257
BstMBI GATC 6 cut(s) 232, 574, 601, 730, 1167, 1242
BstMWI GCNNNNNNNGC 1 cut(s) 1358
BstNI CCWGG 1 cut(s) 984
BstSCI CCNGG 3 cut(s) 547, 982, 1437
BstSFI CTRYAG 1 cut(s) 597
BstUI CGCG 1 cut(s) 291
BstV1I GCAGC 3 cut(s) 370, 392, 415
BstV2I GAAGAC 1 cut(s) 1371
BstX2I RGATCY 2 cut(s) 574, 601
BstXI CCANNNNNNTGG 1 cut(s) 969
BstYI RGATCY 2 cut(s) 574, 601
BsuRI GGCC 6 cut(s) 51, 159, 294, 982, 1177, 1437
BtgI CCRYGG 1 cut(s) 1137
BtsCI GGATG 3 cut(s) 214, 372, 715
BtsI GCAGTG 2 cut(s) 69, 1117
BtsIMutI CAGTG 4 cut(s) 69, 339, 645, 1117
BveI ACCTGC 1 cut(s) 1433
Cac8I GCNNGC 2 cut(s) 245, 1350
CaiI CAGNNNCTG 1 cut(s) 224
CfoI GCGC 1 cut(s) 141
Cfr13I GGNCC 4 cut(s) 158, 400, 469, 755
Csp6I GTAC 1 cut(s) 485
CviQI GTAC 1 cut(s) 485
DdeI CTNAG 5 cut(s) 9, 169, 834, 858, 1020
DpnI GATC 6 cut(s) 234, 576, 603, 732, 1169, 1244
DpnII GATC 6 cut(s) 232, 574, 601, 730, 1167, 1242
DraI TTTAAA 1 cut(s) 570
EaeI YGGCCR 1 cut(s) 1175
Eam1104I CTCTTC 2 cut(s) 419, 1253
EarI CTCTTC 2 cut(s) 419, 1253
Eco130I CCWWGG 1 cut(s) 1137
Eco147I AGGCCT 1 cut(s) 982
Eco31I GGTCTC 1 cut(s) 182
Eco47I GGWCC 3 cut(s) 400, 469, 755
Eco47III AGCGCT 1 cut(s) 140
EcoO109I RGGNCCY 2 cut(s) 158, 400
EcoRI GAATTC 1 cut(s) 868
EcoRII CCWGG 1 cut(s) 982
EcoT14I CCWWGG 1 cut(s) 1137
ErhI CCWWGG 1 cut(s) 1137
Esp3I CGTCTC 2 cut(s) 48, 1257
FaqI GGGAC 3 cut(s) 386, 741, 954
FauNDI CATATG 1 cut(s) 264
FbaI TGATCA 1 cut(s) 730
Fnu4HI GCNGC 4 cut(s) 292, 381, 384, 429
FokI GGATG 3 cut(s) 221, 379, 722
Fsp4HI GCNGC 4 cut(s) 292, 381, 384, 429
FspBI CTAG 5 cut(s) 47, 74, 923, 1394, 1403
GlaI GCGC 1 cut(s) 140
GluI GCNGC 4 cut(s) 292, 381, 384, 429
GsuI CTGGAG 2 cut(s) 315, 1176
HaeII RGCGCY 1 cut(s) 142
HaeIII GGCC 6 cut(s) 51, 159, 294, 982, 1177, 1437
HapII CCGG 3 cut(s) 206, 548, 1438
HhaI GCGC 1 cut(s) 141
Hin6I GCGC 1 cut(s) 139
HinP1I GCGC 1 cut(s) 139
HincII GTYRAC 1 cut(s) 118
HindII GTYRAC 1 cut(s) 118
HindIII AAGCTT 2 cut(s) 956, 1346
HinfI GANTC 6 cut(s) 125, 221, 830, 1001, 1144, 1408
HpaII CCGG 3 cut(s) 206, 548, 1438
HphI GGTGA 2 cut(s) 364, 1082
Hpy166II GTNNAC 4 cut(s) 118, 372, 652, 1070
Hpy188I TCNGA 6 cut(s) 226, 352, 780, 835, 1053, 1149
Hpy188III TCNNGA 4 cut(s) 206, 389, 907, 1394
Hpy8I GTNNAC 4 cut(s) 118, 372, 652, 1070
HpyAV CCTTC 2 cut(s) 1300, 1427
HpyCH4III ACNGT 3 cut(s) 456, 640, 1205
HpyCH4IV ACGT 2 cut(s) 437, 648
HpyCH4V TGCA 7 cut(s) 342, 380, 431, 749, 763, 947, 1352
HpyF10VI GCNNNNNNNGC 1 cut(s) 1358
HpyF3I CTNAG 5 cut(s) 9, 169, 834, 858, 1020
HpySE526I ACGT 2 cut(s) 437, 648
HspAI GCGC 1 cut(s) 139
KflI GGGWCCC 1 cut(s) 400
Kpn2I TCCGGA 1 cut(s) 205
Ksp22I TGATCA 1 cut(s) 730
Kzo9I GATC 6 cut(s) 232, 574, 601, 730, 1167, 1242
LguI GCTCTTC 1 cut(s) 419
LmnI GCTCC 2 cut(s) 43, 1372
Lsp1109I GCAGC 3 cut(s) 370, 392, 415
LweI GCATC 5 cut(s) 217, 668, 676, 700, 771
MaeI CTAG 5 cut(s) 47, 74, 923, 1394, 1403
MaeII ACGT 2 cut(s) 437, 648
MaeIII GTNAC 4 cut(s) 334, 735, 765, 1205
MalI GATC 6 cut(s) 234, 576, 603, 732, 1169, 1244
MboI GATC 6 cut(s) 232, 574, 601, 730, 1167, 1242
MboII GAAGA 6 cut(s) 406, 839, 1270, 1354, 1367, 1371
MfeI CAATTG 1 cut(s) 750
MflI RGATCY 2 cut(s) 574, 601
MhlI GDGCHC 1 cut(s) 414
MlsI TGGCCA 1 cut(s) 1177
MluCI AATT 7 cut(s) 393, 750, 853, 868, 886, 929, 949
MluNI TGGCCA 1 cut(s) 1177
MlyI GAGTC 2 cut(s) 134, 1153
MmeI TCCRAC 2 cut(s) 687, 1081
Mox20I TGGCCA 1 cut(s) 1177
MroI TCCGGA 1 cut(s) 205
MroXI GAANNNNTTC 1 cut(s) 201
MscI TGGCCA 1 cut(s) 1177
MseI TTAA 7 cut(s) 69, 147, 569, 621, 797, 1086, 1284
MslI CAYNNNNRTG 3 cut(s) 967, 1235, 1403
Msp20I TGGCCA 1 cut(s) 1177
MspA1I CMGCKG 1 cut(s) 383
MspI CCGG 3 cut(s) 206, 548, 1438
MspR9I CCNGG 3 cut(s) 549, 984, 1439
MunI CAATTG 1 cut(s) 750
Mva1269I GAATGC 3 cut(s) 446, 902, 1129
MvaI CCWGG 1 cut(s) 984
MvnI CGCG 1 cut(s) 291
MwoI GCNNNNNNNGC 1 cut(s) 1358
NciI CCSGG 2 cut(s) 549, 1439
NcoI CCATGG 1 cut(s) 1137
NdeI CATATG 1 cut(s) 264
NdeII GATC 6 cut(s) 232, 574, 601, 730, 1167, 1242
NlaIV GGNNCC 6 cut(s) 160, 401, 402, 546, 757, 864
NmuCI GTSAC 2 cut(s) 334, 735
NspV TTCGAA 3 cut(s) 417, 592, 1386
PaqCI CACCTGC 1 cut(s) 1433
PceI AGGCCT 1 cut(s) 982
PciSI GCTCTTC 1 cut(s) 419
PctI GAATGC 3 cut(s) 446, 902, 1129
PdmI GAANNNNTTC 1 cut(s) 201
PfeI GAWTC 4 cut(s) 221, 830, 1001, 1408
PflMI CCANNNNNTGG 1 cut(s) 1100
PfoI TCCNGGA 1 cut(s) 547
PkrI GCNGC 4 cut(s) 293, 382, 385, 430
PleI GAGTC 2 cut(s) 133, 1152
PpsI GAGTC 2 cut(s) 133, 1152
PpuMI RGGWCCY 1 cut(s) 400
Psp1406I AACGTT 2 cut(s) 437, 648
Psp5II RGGWCCY 1 cut(s) 400
Psp6I CCWGG 1 cut(s) 982
PspGI CCWGG 1 cut(s) 982
PspN4I GGNNCC 6 cut(s) 160, 401, 402, 546, 757, 864
PspPI GGNCC 4 cut(s) 158, 400, 469, 755
PspPPI RGGWCCY 1 cut(s) 400
PstNI CAGNNNCTG 1 cut(s) 224
PsuI RGATCY 2 cut(s) 574, 601
PvuII CAGCTG 1 cut(s) 383
RsaI GTAC 1 cut(s) 486
RsaNI GTAC 1 cut(s) 485
RseI CAYNNNNRTG 3 cut(s) 967, 1235, 1403
SapI GCTCTTC 1 cut(s) 419
SaqAI TTAA 7 cut(s) 69, 147, 569, 621, 797, 1086, 1284
SatI GCNGC 4 cut(s) 292, 381, 384, 429
Sau3AI GATC 6 cut(s) 232, 574, 601, 730, 1167, 1242
Sau96I GGNCC 4 cut(s) 158, 400, 469, 755
SchI GAGTC 2 cut(s) 134, 1153
ScrFI CCNGG 3 cut(s) 549, 984, 1439
SduI GDGCHC 1 cut(s) 414
SfaNI GCATC 5 cut(s) 217, 668, 676, 700, 771
SfcI CTRYAG 1 cut(s) 597
SfuI TTCGAA 3 cut(s) 417, 592, 1386
SinI GGWCC 3 cut(s) 400, 469, 755
SmiMI CAYNNNNRTG 3 cut(s) 967, 1235, 1403
SmlI CTYRAG 1 cut(s) 387
SmoI CTYRAG 1 cut(s) 387
Sse9I AATT 7 cut(s) 393, 750, 853, 868, 886, 929, 949
SseBI AGGCCT 1 cut(s) 982
SsiI CCGC 3 cut(s) 291, 1122, 1370
SspMI CTAG 5 cut(s) 47, 74, 923, 1394, 1403
StuI AGGCCT 1 cut(s) 982
StyD4I CCNGG 3 cut(s) 547, 982, 1437
StyI CCWWGG 1 cut(s) 1137
TaaI ACNGT 3 cut(s) 456, 640, 1205
TaiI ACGT 2 cut(s) 440, 651
TaqI TCGA 3 cut(s) 417, 592, 1386
TasI AATT 7 cut(s) 393, 750, 853, 868, 886, 929, 949
TauI GCSGC 1 cut(s) 294
TfiI GAWTC 4 cut(s) 221, 830, 1001, 1408
Tru1I TTAA 7 cut(s) 69, 147, 569, 621, 797, 1086, 1284
Tru9I TTAA 7 cut(s) 69, 147, 569, 621, 797, 1086, 1284
TscAI CASTG 4 cut(s) 69, 339, 645, 1124
TseFI GTSAC 2 cut(s) 334, 735
TseI GCWGC 3 cut(s) 380, 383, 428
Tsp45I GTSAC 2 cut(s) 334, 735
TspDTI ATGAA 7 cut(s) 92, 281, 430, 569, 619, 955, 1371
TspGWI ACGGA 1 cut(s) 30
TspRI CASTG 4 cut(s) 69, 339, 645, 1124
Van91I CCANNNNNTGG 1 cut(s) 1100
VpaK11BI GGWCC 3 cut(s) 400, 469, 755
XapI RAATTY 5 cut(s) 853, 868, 886, 929, 949
XbaI TCTAGA 1 cut(s) 1393
XmnI GAANNNNTTC 1 cut(s) 201
XspI CTAG 5 cut(s) 47, 74, 923, 1394, 1403
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.