MD13G1225900.v1.1

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0000097
Physical Location & Seq
Forward (+)
22074076 .. 22076237
2162 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1225900.v1.1.491

Sequence Viewer

Length: 1440 bp
ATGACTTCCAGGAACAACGTCCCTCATGCTGTTTGCATTCCTTTTCCAGTTCAAAGCCACATAAAGGGAATGCGTCAATTAGCACAACTCCTCCACCATAGAGGTGTTCACGTAACCTTTGTCAACACGGAGTTCAATCACAAACGTTTTCTCAAATCTTTAGGACCCAACTCCCTCGACGGCGTGCCTGGTTTCCGATTCGAAACCATACCGGATGGGCTCCAAAACTCAGATGAAGACACCCAACAAGACATCATGTTGCTTGCTGAGGCCATCCGAAAGAATTTCTTGGCTCCTTTTCGCGACCTCCTCGCTAAACTTAACCACACGGCTGGCGATGCTCCTGTGACTCACATCGTTGCAGACGGTTGGATGTCGGCGTTCCCCATGGAGGCAGCAGAAGAAATTGGTATCCCCGTAGTACTCTTTTTTACTATTTCTGCATGCAGCTTAATGGGCTATATACAGTTTCCAGCTTTGGTTGAAAAAGGACTTGTCCCACTCAAAGATGCGAGTTGCTTAACAAATGGCTTTCTGGACAAGGTGATTGATTGGATTCCAGGAATGAAAGGTATTCGCTTAAGGGATCTCCCAAAAGACATGAGAGTCACAAATCCCAATGATAAATGTTGGAAATACTGTTTGGAAGCAATTCAAAGATTTGTCAAAGGTTCAGCAGTCGTTGTTCATAGTTTTGGTGCATTAGAGAAAGATGTGTTGGATGCTCTTTTGTCCTTGCTTCCAGTTGTTTATGCGATTGGTCCTCTCCAATTGCTTCTCAACCAGATGCCGGAGCATCCTCTGAATACTACCGGATACAGTCTATGGAAAGAAGAAACTGAGTGCTTCAAATGGCTAAATTCCAAGTCCCCAAATTCGGTTGTTTATGTGAATTTTGGCAGTTTAGCGTTTGTAACACCGGAACAGCTTGTCGAGTTTGGTTGGGGACTAGCAAACAGCAAGCTTCCCTTCATTTGGGTAATCAGACCTGATCTTGTTGTTGGTGAGTCTGTGATTTTGCCACCGGAGTTGGTCGCAGAGACTAAGGAAAGAGGTCTAATAGCAAGTTGGTGCCCTCAAGAACAAGTTCTTGAGCACCCATCAGTTGGAGGTTTTTTAACACACAGCGGTTGGAATTCGACCGTTGAGAGTCTATGCGCAGGTGTGCCTATGCTGTGTTGGCCATGCTCTAGTGACCAGCCAACAAACTGTTGCTATGCGTGCAAGGAATGGGGGGTTGGCATGGAGATTAGTAATGATGTGAAGAGAGATGAAGTAGAGAGGCTTGTTAAAGAGTTAATGGAAGGAGAGAAAGGTAAGAAGATGAAAAATAAGGTCATGGAGTGGAAGAAACTCGCAGAAGCCGCCGCTAGTCCACATGGTTCTTCATCTGCAAACTTAGACAATTTTGTGAATCAAGTGCTATCAAGAAAAACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

480

Amino Acids

53.25

Weight (kDa)

6.04

Isoelectric Point (pI)

37.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 19 - 441 7.6e-26 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1151
AasI GACNNNNNNGTC 1 cut(s) 605
Acc16I TGCGCA 1 cut(s) 1159
Acc36I ACCTGC 1 cut(s) 1151
AccB1I GGYRCC 1 cut(s) 1071
AccB7I CCANNNNNTGG 1 cut(s) 1106
AccII CGCG 1 cut(s) 303
AciI CCGC 3 cut(s) 1128, 1365, 1368
AclI AACGTT 1 cut(s) 145
AclWI GGATC 1 cut(s) 594
AcoI YGGCCR 1 cut(s) 1181
AcsI RAATTY 5 cut(s) 283, 859, 874, 892, 1135
AfaI GTAC 1 cut(s) 423
AfiI CCNNNNNNNGG 6 cut(s) 64, 391, 790, 877, 975, 1106
AflII CTTAAG 1 cut(s) 580
AgsI TTSAA 5 cut(s) 53, 136, 485, 656, 850
AjnI CCWGG 3 cut(s) 8, 187, 559
AjuI GAANNNNNNNTTGG 6 cut(s) 626, 658, 701, 733, 1221, 1253
AluBI AGCT 4 cut(s) 450, 476, 928, 964
AluI AGCT 4 cut(s) 450, 476, 928, 964
Alw21I GWGCWC 1 cut(s) 1098
Alw26I GTCTC 1 cut(s) 1034
AlwI GGATC 1 cut(s) 594
AoxI GGCC 2 cut(s) 270, 1181
ApeKI GCWGC 2 cut(s) 395, 447
ApoI RAATTY 5 cut(s) 283, 859, 874, 892, 1135
Asp700I GAANNNNTTC 2 cut(s) 651, 1086
AspLEI GCGC 1 cut(s) 1160
AspS9I GGNCC 2 cut(s) 164, 761
AsuHPI GGTGA 2 cut(s) 556, 1016
AsuII TTCGAA 1 cut(s) 201
AvaII GGWCC 2 cut(s) 164, 761
BaeGI GKGCMC 1 cut(s) 1076
BalI TGGCCA 1 cut(s) 1183
BanI GGYRCC 1 cut(s) 1071
BanII GRGCYC 1 cut(s) 222
BbsI GAAGAC 1 cut(s) 243
Bbv12I GWGCWC 1 cut(s) 1098
BbvCI CCTCAGC 1 cut(s) 267
BbvI GCAGC 2 cut(s) 407, 459
BccI CCATC 3 cut(s) 209, 281, 1108
BceAI ACGGC 2 cut(s) 196, 345
BciT130I CCWGG 3 cut(s) 10, 189, 561
BciVI GTATCC 2 cut(s) 422, 809
BcoDI GTCTC 1 cut(s) 1034
BfaI CTAG 3 cut(s) 950, 1191, 1371
BfrI CTTAAG 1 cut(s) 580
BfuAI ACCTGC 1 cut(s) 1151
BfuI GTATCC 2 cut(s) 422, 809
BisI GCNGC 4 cut(s) 396, 448, 1365, 1368
BlsI GCNGC 4 cut(s) 397, 449, 1366, 1369
BmcAI AGTACT 1 cut(s) 423
Bme1390I CCNGG 3 cut(s) 10, 189, 561
Bme18I GGWCC 2 cut(s) 164, 761
BmgT120I GGNCC 2 cut(s) 164, 761
BmiI GGNNCC 4 cut(s) 166, 221, 294, 1073
BmrFI CCNGG 3 cut(s) 10, 189, 561
BmsI GCATC 5 cut(s) 328, 499, 712, 777, 805
BpiI GAAGAC 1 cut(s) 243
Bpu10I CCTNAGC 1 cut(s) 267
Bpu14I TTCGAA 1 cut(s) 201
BpuEI CTTGAG 2 cut(s) 1062, 1112
BsaAI YACGTR 1 cut(s) 112
BsaJI CCNNGG 1 cut(s) 387
BsaWI WCCGGW 4 cut(s) 211, 812, 919, 1024
BsaXI ACNNNNNCTCC 2 cut(s) 75, 105
Bsc4I CCNNNNNNNGG 6 cut(s) 64, 391, 790, 877, 975, 1106
Bse1I ACTGG 2 cut(s) 47, 743
BseBI CCWGG 3 cut(s) 10, 189, 561
BseDI CCNNGG 1 cut(s) 387
BseGI GGATG 5 cut(s) 220, 273, 378, 727, 796
BseLI CCNNNNNNNGG 6 cut(s) 64, 391, 790, 877, 975, 1106
BseMII CTCAG 3 cut(s) 243, 258, 831
BseNI ACTGG 2 cut(s) 47, 743
BseRI GAGGAG 2 cut(s) 80, 299
BseSI GKGCMC 1 cut(s) 1076
BseXI GCAGC 2 cut(s) 407, 459
Bsh1236I CGCG 1 cut(s) 303
Bsh1285I CGRYCG 1 cut(s) 1143
BshFI GGCC 2 cut(s) 272, 1183
BshNI GGYRCC 1 cut(s) 1071
BsiEI CGRYCG 1 cut(s) 1143
BsiHKAI GWGCWC 1 cut(s) 1098
BsiSI CCGG 5 cut(s) 212, 791, 813, 920, 1025
BslFI GGGAC 4 cut(s) 5, 482, 853, 960
BslI CCNNNNNNNGG 6 cut(s) 64, 391, 790, 877, 975, 1106
BsmAI GTCTC 1 cut(s) 1034
BsmFI GGGAC 4 cut(s) 5, 482, 853, 960
BsmI GAATGC 2 cut(s) 36, 75
BsnI GGCC 2 cut(s) 272, 1183
Bsp119I TTCGAA 1 cut(s) 201
Bsp1286I GDGCHC 3 cut(s) 222, 1076, 1098
Bsp143I GATC 2 cut(s) 586, 991
Bsp19I CCATGG 1 cut(s) 387
Bsp68I TCGCGA 1 cut(s) 303
BspACI CCGC 3 cut(s) 1128, 1365, 1368
BspANI GGCC 2 cut(s) 272, 1183
BspCNI CTCAG 3 cut(s) 242, 259, 832
BspFNI CGCG 1 cut(s) 303
BspLI GGNNCC 4 cut(s) 166, 221, 294, 1073
BspMI ACCTGC 1 cut(s) 1151
BspPI GGATC 1 cut(s) 594
BspT104I TTCGAA 1 cut(s) 201
BspT107I GGYRCC 1 cut(s) 1071
BspTI CTTAAG 1 cut(s) 580
BsrI ACTGG 2 cut(s) 47, 743
BssECI CCNNGG 1 cut(s) 387
BssMI GATC 2 cut(s) 586, 991
BssT1I CCWWGG 1 cut(s) 387
Bst2UI CCWGG 3 cut(s) 10, 189, 561
Bst4CI ACNGT 6 cut(s) 368, 468, 641, 821, 1144, 1211
Bst6I CTCTTC 1 cut(s) 1259
BstAFI CTTAAG 1 cut(s) 580
BstBAI YACGTR 1 cut(s) 112
BstBI TTCGAA 1 cut(s) 201
BstC8I GCNNGC 6 cut(s) 185, 264, 334, 445, 962, 1222
BstDEI CTNAG 6 cut(s) 229, 267, 840, 1044, 1399, 1437
BstDSI CCRYGG 1 cut(s) 387
BstF5I GGATG 5 cut(s) 220, 273, 378, 727, 796
BstFNI CGCG 1 cut(s) 303
BstHHI GCGC 1 cut(s) 1160
BstKTI GATC 2 cut(s) 589, 994
BstMAI GTCTC 1 cut(s) 1034
BstMBI GATC 2 cut(s) 586, 991
BstMCI CGRYCG 1 cut(s) 1143
BstMWI GCNNNNNNNGC 5 cut(s) 338, 456, 1180, 1221, 1364
BstNI CCWGG 3 cut(s) 10, 189, 561
BstNSI RCATGY 1 cut(s) 447
BstSCI CCNGG 3 cut(s) 8, 187, 559
BstSLI GKGCMC 1 cut(s) 1076
BstUI CGCG 1 cut(s) 303
BstV1I GCAGC 2 cut(s) 407, 459
BstV2I GAAGAC 1 cut(s) 243
BstX2I RGATCY 1 cut(s) 586
BstXI CCANNNNNNTGG 1 cut(s) 332
BstYI RGATCY 1 cut(s) 586
BsuI GTATCC 2 cut(s) 422, 809
BsuRI GGCC 2 cut(s) 272, 1183
BtgI CCRYGG 1 cut(s) 387
BtgZI GCGATG 1 cut(s) 351
BtsCI GGATG 5 cut(s) 220, 273, 378, 727, 796
BtuMI TCGCGA 1 cut(s) 303
BveI ACCTGC 1 cut(s) 1151
Cac8I GCNNGC 6 cut(s) 185, 264, 334, 445, 962, 1222
CfoI GCGC 1 cut(s) 1160
Cfr13I GGNCC 2 cut(s) 164, 761
CseI GACGC 1 cut(s) 62
Csp6I GTAC 1 cut(s) 422
CspCI CAANNNNNGTGG 2 cut(s) 1011, 1046
CviAII CATG 9 cut(s) 26, 256, 388, 444, 601, 1185, 1243, 1339, 1379
CviQI GTAC 1 cut(s) 422
DdeI CTNAG 6 cut(s) 229, 267, 840, 1044, 1399, 1437
DpnI GATC 2 cut(s) 588, 993
DpnII GATC 2 cut(s) 586, 991
DrdI GACNNNNNNGTC 1 cut(s) 605
DseDI GACNNNNNNGTC 1 cut(s) 605
EaeI YGGCCR 1 cut(s) 1181
Eam1104I CTCTTC 1 cut(s) 1259
EarI CTCTTC 1 cut(s) 1259
Eco130I CCWWGG 1 cut(s) 387
Eco24I GRGCYC 1 cut(s) 222
Eco47I GGWCC 2 cut(s) 164, 761
EcoO109I RGGNCCY 1 cut(s) 164
EcoRI GAATTC 1 cut(s) 1135
EcoRII CCWGG 3 cut(s) 8, 187, 559
EcoT14I CCWWGG 1 cut(s) 387
EcoT38I GRGCYC 1 cut(s) 222
ErhI CCWWGG 1 cut(s) 387
FaeI CATG 9 cut(s) 29, 259, 391, 447, 604, 1188, 1246, 1342, 1382
FalI AAGNNNNNCTT 5 cut(s) 272, 304, 953, 985, 1420
FaqI GGGAC 4 cut(s) 5, 482, 853, 960
FatI CATG 9 cut(s) 25, 255, 387, 443, 600, 1184, 1242, 1338, 1378
Fnu4HI GCNGC 4 cut(s) 396, 448, 1365, 1368
FokI GGATG 5 cut(s) 227, 260, 385, 734, 783
FriOI GRGCYC 1 cut(s) 222
Fsp4HI GCNGC 4 cut(s) 396, 448, 1365, 1368
FspBI CTAG 3 cut(s) 950, 1191, 1371
FspI TGCGCA 1 cut(s) 1159
GlaI GCGC 1 cut(s) 1159
GluI GCNGC 4 cut(s) 396, 448, 1365, 1368
HaeIII GGCC 2 cut(s) 272, 1183
HapII CCGG 5 cut(s) 212, 791, 813, 920, 1025
HgaI GACGC 1 cut(s) 62
HhaI GCGC 1 cut(s) 1160
Hin1II CATG 9 cut(s) 29, 259, 391, 447, 604, 1188, 1246, 1342, 1382
Hin6I GCGC 1 cut(s) 1158
HinP1I GCGC 1 cut(s) 1158
HincII GTYRAC 1 cut(s) 124
HindII GTYRAC 1 cut(s) 124
HindIII AAGCTT 1 cut(s) 962
HinfI GANTC 7 cut(s) 198, 349, 556, 606, 1007, 1150, 1414
HpaII CCGG 5 cut(s) 212, 791, 813, 920, 1025
HphI GGTGA 2 cut(s) 556, 1016
Hpy166II GTNNAC 3 cut(s) 109, 124, 1376
Hpy188I TCNGA 5 cut(s) 197, 232, 278, 804, 986
Hpy188III TCNNGA 5 cut(s) 302, 536, 1079, 1091, 1428
Hpy8I GTNNAC 3 cut(s) 109, 124, 1376
Hpy99I CGWCG 1 cut(s) 182
HpyAV CCTTC 2 cut(s) 979, 1298
HpyCH4III ACNGT 6 cut(s) 368, 468, 641, 821, 1144, 1211
HpyCH4IV ACGT 3 cut(s) 18, 111, 145
HpyCH4V TGCA 7 cut(s) 36, 362, 443, 447, 701, 1224, 1394
HpyF10VI GCNNNNNNNGC 5 cut(s) 338, 456, 1180, 1221, 1364
HpyF3I CTNAG 6 cut(s) 229, 267, 840, 1044, 1399, 1437
HpySE526I ACGT 3 cut(s) 18, 111, 145
Hsp92II CATG 9 cut(s) 29, 259, 391, 447, 604, 1188, 1246, 1342, 1382
HspAI GCGC 1 cut(s) 1158
Kzo9I GATC 2 cut(s) 586, 991
LmnI GCTCC 4 cut(s) 225, 298, 346, 793
Lsp1109I GCAGC 2 cut(s) 407, 459
LweI GCATC 5 cut(s) 328, 499, 712, 777, 805
MaeI CTAG 3 cut(s) 950, 1191, 1371
MaeII ACGT 3 cut(s) 18, 111, 145
MaeIII GTNAC 5 cut(s) 112, 346, 607, 913, 1193
MalI GATC 2 cut(s) 588, 993
MboI GATC 2 cut(s) 586, 991
MboII GAAGA 7 cut(s) 248, 413, 845, 1276, 1333, 1360, 1377
MfeI CAATTG 1 cut(s) 770
MflI RGATCY 1 cut(s) 586
MhlI GDGCHC 3 cut(s) 222, 1076, 1098
MlsI TGGCCA 1 cut(s) 1183
MluNI TGGCCA 1 cut(s) 1183
MlyI GAGTC 4 cut(s) 343, 615, 1016, 1159
MmeI TCCRAC 5 cut(s) 350, 611, 699, 1087, 1112
Mox20I TGGCCA 1 cut(s) 1183
MroXI GAANNNNTTC 2 cut(s) 651, 1086
MscI TGGCCA 1 cut(s) 1183
MseI TTAA 7 cut(s) 321, 452, 521, 581, 1118, 1290, 1298
MslI CAYNNNNRTG 1 cut(s) 102
Msp20I TGGCCA 1 cut(s) 1183
MspA1I CMGCKG 1 cut(s) 1128
MspCI CTTAAG 1 cut(s) 580
MspI CCGG 5 cut(s) 212, 791, 813, 920, 1025
MspR9I CCNGG 3 cut(s) 10, 189, 561
MunI CAATTG 1 cut(s) 770
Mva1269I GAATGC 2 cut(s) 36, 75
MvaI CCWGG 3 cut(s) 10, 189, 561
MvnI CGCG 1 cut(s) 303
MwoI GCNNNNNNNGC 5 cut(s) 338, 456, 1180, 1221, 1364
NcoI CCATGG 1 cut(s) 387
NdeII GATC 2 cut(s) 586, 991
NlaIII CATG 9 cut(s) 29, 259, 391, 447, 604, 1188, 1246, 1342, 1382
NlaIV GGNNCC 4 cut(s) 166, 221, 294, 1073
NmuCI GTSAC 3 cut(s) 346, 607, 1193
NruI TCGCGA 1 cut(s) 303
NsbI TGCGCA 1 cut(s) 1159
NspI RCATGY 1 cut(s) 447
NspV TTCGAA 1 cut(s) 201
PaeI GCATGC 1 cut(s) 447
PaqCI CACCTGC 1 cut(s) 1151
PctI GAATGC 2 cut(s) 36, 75
PdmI GAANNNNTTC 2 cut(s) 651, 1086
PfeI GAWTC 3 cut(s) 198, 556, 1414
PflMI CCANNNNNTGG 1 cut(s) 1106
PfoI TCCNGGA 2 cut(s) 8, 559
PkrI GCNGC 4 cut(s) 397, 449, 1366, 1369
PleI GAGTC 4 cut(s) 343, 614, 1015, 1158
PpsI GAGTC 4 cut(s) 343, 614, 1015, 1158
Ppu21I YACGTR 1 cut(s) 112
PpuMI RGGWCCY 1 cut(s) 164
Psp1406I AACGTT 1 cut(s) 145
Psp5II RGGWCCY 1 cut(s) 164
Psp6I CCWGG 3 cut(s) 8, 187, 559
PspGI CCWGG 3 cut(s) 8, 187, 559
PspN4I GGNNCC 4 cut(s) 166, 221, 294, 1073
PspPI GGNCC 2 cut(s) 164, 761
PspPPI RGGWCCY 1 cut(s) 164
PsuI RGATCY 1 cut(s) 586
RruI TCGCGA 1 cut(s) 303
RsaI GTAC 1 cut(s) 423
RsaNI GTAC 1 cut(s) 422
RseI CAYNNNNRTG 1 cut(s) 102
SaqAI TTAA 7 cut(s) 321, 452, 521, 581, 1118, 1290, 1298
SatI GCNGC 4 cut(s) 396, 448, 1365, 1368
Sau3AI GATC 2 cut(s) 586, 991
Sau96I GGNCC 2 cut(s) 164, 761
ScaI AGTACT 1 cut(s) 423
SchI GAGTC 4 cut(s) 343, 615, 1016, 1159
ScrFI CCNGG 3 cut(s) 10, 189, 561
SduI GDGCHC 3 cut(s) 222, 1076, 1098
SfaNI GCATC 5 cut(s) 328, 499, 712, 777, 805
SfuI TTCGAA 1 cut(s) 201
SinI GGWCC 2 cut(s) 164, 761
SmiMI CAYNNNNRTG 1 cut(s) 102
SmlI CTYRAG 3 cut(s) 580, 1077, 1091
SmoI CTYRAG 3 cut(s) 580, 1077, 1091
SphI GCATGC 1 cut(s) 447
SsiI CCGC 3 cut(s) 1128, 1365, 1368
SspMI CTAG 3 cut(s) 950, 1191, 1371
StyD4I CCNGG 3 cut(s) 8, 187, 559
StyI CCWWGG 1 cut(s) 387
TaaI ACNGT 6 cut(s) 368, 468, 641, 821, 1144, 1211
TaiI ACGT 3 cut(s) 21, 114, 148
TaqI TCGA 4 cut(s) 177, 201, 933, 1139
TatI WGTACW 1 cut(s) 421
TauI GCSGC 2 cut(s) 1367, 1370
TfiI GAWTC 3 cut(s) 198, 556, 1414
Tru1I TTAA 7 cut(s) 321, 452, 521, 581, 1118, 1290, 1298
Tru9I TTAA 7 cut(s) 321, 452, 521, 581, 1118, 1290, 1298
TseFI GTSAC 3 cut(s) 346, 607, 1193
TseI GCWGC 2 cut(s) 395, 447
Tsp45I GTSAC 3 cut(s) 346, 607, 1193
TspDTI ATGAA 7 cut(s) 249, 581, 677, 961, 1287, 1340, 1377
TspGWI ACGGA 1 cut(s) 143
Van91I CCANNNNNTGG 1 cut(s) 1106
Vha464I CTTAAG 1 cut(s) 580
VpaK11BI GGWCC 2 cut(s) 164, 761
XapI RAATTY 5 cut(s) 283, 859, 874, 892, 1135
XceI RCATGY 1 cut(s) 447
XmnI GAANNNNTTC 2 cut(s) 651, 1086
XspI CTAG 3 cut(s) 950, 1191, 1371
ZrmI AGTACT 1 cut(s) 423
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.