FvH4_6g39840

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000097
Physical Location & Seq
Forward (+)
31460671 .. 31462619
1949 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g39840.t1

Sequence Viewer

Length: 1467 bp
ATGGCGATGGGTTCCAAGGAATTTGTAGCTAATAAGCCTCATGCTGTTTGTGTTCCAGTTCCATCTCAAAGCCACATCAAAGCAATGCTCGAACTAGCTAAGCTCCTCCACCACAGGGGCTTCCACATTACCTTTGTCAACACAGAGTTCAACCACAAACGCTTTCTTAGATCTCAAGGACCCAACTCCCTCGACGGCTTGCCTGATTTTCGCTTCGAGGCCATCCCCGATGGAATTCCTGTTGCAGGTTCGAATGAAGATGCCACCCAAGACGTCAATGTGGTCACTGAAGCCTTGCTGAAAGATCAGTTACTGGCTCCTTTCCAAGAACTACTGGTGAAGCTCAATGGCCATGACATTGGTCTTCCGGTGACTTGTGTCGTTTCCGATGGTTTTATGCCGTTTGCCATCACAGCTGCCGGAGAACTTGGAGTGCCTGCAGTAGTCTTGTTCTCTATTTCTGCTTGCAGTTTTCTGGGATATAAACAATATCCCACTTTGGTGGAAAAAGGACTCGCACCACTCGAAGATGAGAGCTGTTTGACAAATGGGTTTTTGGACAAGGTGTTAGATTGGATTCCAGGAATGAAAGGTATCCGTTTGAGAGATTTACCCACCCACTTTCGAACTACGAACCCCGACGACGTCCTGTTCAACTTCTGCATGGAAATAATGCATAGAGTTGATAAAGCTTCGGCAGTAATTGTTCATACTTTTGATGCTTTGGAGTCTCAAGTTTTGGAGGCTCTCTCATCTATGCCGAAGCTCCCACCTGTTTATGCAATTGGACCTCAACAATTACACCTCAATCAATTGCCAGAGGATCCTTTGAAGAATATGGGATATAGTCTATGGAAGGAAGAGACTGAGTGTCTCAAATGGCTTGATTCTAAGGAGCCGAACTCTGTTATTTACGTCAGTTTTGGCAGTATAGCGGTAATGTCACCACAGAAGCTTGTAGAGTTTGGTTGGGGACTTGCAAATAGTAATGTTTCATTCATCTGGGTCATCAGACCCGATTTGGTGCTTGGCGAGTCTGCAATTTTGCCACCGGAGTTTGTAGCTGAAACCAAGGAAAGAGGTCTAATTGCGAGTTGGTGCCCGCAGGAGCAAGTACTTAACCACCCATCAGTTGGAGGGTTCTTGACACACTGCGGTTGGAATTCGATGATTGAGAGTTTGTGTGCAGGTGTGCCTATGCTGTGTTGGCCATTCTTTGCTGACCAACAAACAAATTGTTGGTATGCTTGTAATGAATGGGGCATTGGCATGGAGATTAGTAATGATGTCAAGAGAGACGAAGTTGAGAAGCTTGTTAAAGAGTTGATGAAGGGAGAGATGGGTGTGAAAATGAGAAATAAGGCCTTGGAGTGGAAGAAGCTTGCTGAAGATGCAACTGCTCCACATGCTTCATCATCCAAGAACTTGGACAATGTAGTGAATCTAATGCTGTCAAAGGAAATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

489

Amino Acids

54.16

Weight (kDa)

5.25

Isoelectric Point (pI)

46.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 293 - 446 2e-26 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1178
AatII GACGTC 2 cut(s) 276, 648
Acc36I ACCTGC 2 cut(s) 236, 1178
AccB1I GGYRCC 1 cut(s) 1098
AccB7I CCANNNNNTGG 1 cut(s) 1133
AciI CCGC 3 cut(s) 935, 1103, 1155
AclWI GGATC 2 cut(s) 818, 831
AcoI YGGCCR 2 cut(s) 349, 1208
AcsI RAATTY 4 cut(s) 20, 234, 1162, 1461
AcuI CTGAAG 2 cut(s) 309, 1407
AcyI GRCGYC 2 cut(s) 273, 645
AfaI GTAC 1 cut(s) 1116
AfiI CCNNNNNNNGG 4 cut(s) 115, 245, 1133, 1371
AgsI TTSAA 3 cut(s) 151, 655, 832
AhdI GACNNNNNGTC 1 cut(s) 870
AjnI CCWGG 1 cut(s) 580
AjuI GAANNNNNNNTTGG 2 cut(s) 1248, 1280
AleI CACNNNNGTG 1 cut(s) 500
Alw26I GTCTC 4 cut(s) 735, 857, 878, 1290
AlwI GGATC 2 cut(s) 818, 831
AlwNI CAGNNNCTG 1 cut(s) 313
AoxI GGCC 4 cut(s) 219, 349, 1208, 1362
ApeKI GCWGC 1 cut(s) 416
ApoI RAATTY 4 cut(s) 20, 234, 1162, 1461
AspS9I GGNCC 2 cut(s) 179, 788
AsuHPI GGTGA 3 cut(s) 349, 382, 936
AsuII TTCGAA 2 cut(s) 251, 625
AvaII GGWCC 2 cut(s) 179, 788
BaeGI GKGCMC 1 cut(s) 1103
BalI TGGCCA 2 cut(s) 351, 1210
BamHI GGATCC 1 cut(s) 823
BanI GGYRCC 1 cut(s) 1098
BbsI GAAGAC 1 cut(s) 356
BbvI GCAGC 1 cut(s) 403
BccI CCATC 7 cut(s) 70, 224, 230, 383, 416, 1135, 1333
BceAI ACGGC 2 cut(s) 211, 385
BciT130I CCWGG 1 cut(s) 582
BciVI GTATCC 1 cut(s) 605
BcoDI GTCTC 4 cut(s) 735, 857, 878, 1290
BfaI CTAG 1 cut(s) 95
BfmI CTRYAG 1 cut(s) 438
BfuAI ACCTGC 2 cut(s) 236, 1178
BfuI GTATCC 1 cut(s) 605
BglII AGATCT 1 cut(s) 170
BisI GCNGC 1 cut(s) 417
BlpI GCTNAGC 1 cut(s) 99
BlsI GCNGC 1 cut(s) 418
BmcAI AGTACT 1 cut(s) 1116
Bme1390I CCNGG 1 cut(s) 582
Bme18I GGWCC 2 cut(s) 179, 788
BmeRI GACNNNNNGTC 1 cut(s) 870
BmgT120I GGNCC 2 cut(s) 179, 788
BmiI GGNNCC 6 cut(s) 13, 181, 318, 825, 897, 1100
BmrFI CCNGG 1 cut(s) 582
BmsI GCATC 3 cut(s) 250, 709, 1381
BoxI GACNNNNGTC 2 cut(s) 360, 377
BpiI GAAGAC 1 cut(s) 356
BplI GAGNNNNNCTC 4 cut(s) 734, 766, 887, 919
Bpu1102I GCTNAGC 1 cut(s) 99
Bpu14I TTCGAA 2 cut(s) 251, 625
BpuEI CTTGAG 2 cut(s) 159, 717
BsaHI GRCGYC 2 cut(s) 273, 645
BsaJI CCNNGG 3 cut(s) 15, 1071, 1365
BsaWI WCCGGW 2 cut(s) 367, 1051
Bsc4I CCNNNNNNNGG 4 cut(s) 115, 245, 1133, 1371
Bse1I ACTGG 3 cut(s) 56, 318, 339
Bse3DI GCAATG 1 cut(s) 90
BseBI CCWGG 1 cut(s) 582
BseDI CCNNGG 3 cut(s) 15, 1071, 1365
BseGI GGATG 2 cut(s) 222, 1415
BseLI CCNNNNNNNGG 4 cut(s) 115, 245, 1133, 1371
BseMI GCAATG 1 cut(s) 90
BseMII CTCAG 1 cut(s) 858
BseNI ACTGG 3 cut(s) 56, 318, 339
BseRI GAGGAG 1 cut(s) 95
BseSI GKGCMC 1 cut(s) 1103
BseXI GCAGC 1 cut(s) 403
BsgI GTGCAG 1 cut(s) 1206
BshFI GGCC 4 cut(s) 221, 351, 1210, 1364
BshNI GGYRCC 1 cut(s) 1098
BsiSI CCGG 3 cut(s) 368, 420, 1052
BslFI GGGAC 1 cut(s) 987
BslI CCNNNNNNNGG 4 cut(s) 115, 245, 1133, 1371
BsmAI GTCTC 4 cut(s) 735, 857, 878, 1290
BsmBI CGTCTC 1 cut(s) 1290
BsmFI GGGAC 1 cut(s) 987
BsnI GGCC 4 cut(s) 221, 351, 1210, 1364
Bsp119I TTCGAA 2 cut(s) 251, 625
Bsp1286I GDGCHC 1 cut(s) 1103
Bsp143I GATC 3 cut(s) 170, 304, 823
Bsp1720I GCTNAGC 1 cut(s) 99
BspACI CCGC 3 cut(s) 935, 1103, 1155
BspANI GGCC 4 cut(s) 221, 351, 1210, 1364
BspCNI CTCAG 1 cut(s) 859
BspLI GGNNCC 6 cut(s) 13, 181, 318, 825, 897, 1100
BspMAI CTGCAG 1 cut(s) 442
BspMI ACCTGC 2 cut(s) 236, 1178
BspPI GGATC 2 cut(s) 818, 831
BspT104I TTCGAA 2 cut(s) 251, 625
BspT107I GGYRCC 1 cut(s) 1098
BsrDI GCAATG 1 cut(s) 90
BsrI ACTGG 3 cut(s) 56, 318, 339
BssECI CCNNGG 3 cut(s) 15, 1071, 1365
BssMI GATC 3 cut(s) 170, 304, 823
BssNI GRCGYC 2 cut(s) 273, 645
BssT1I CCWWGG 3 cut(s) 15, 1071, 1365
Bst2UI CCWGG 1 cut(s) 582
Bst6I CTCTTC 1 cut(s) 855
BstACI GRCGYC 2 cut(s) 273, 645
BstBI TTCGAA 2 cut(s) 251, 625
BstC8I GCNNGC 5 cut(s) 200, 438, 466, 1103, 1383
BstDEI CTNAG 4 cut(s) 99, 167, 867, 891
BstENI CCTNNNNNAGG 1 cut(s) 243
BstF5I GGATG 2 cut(s) 222, 1415
BstKTI GATC 3 cut(s) 173, 307, 826
BstMAI GTCTC 4 cut(s) 735, 857, 878, 1290
BstMBI GATC 3 cut(s) 170, 304, 823
BstMWI GCNNNNNNNGC 4 cut(s) 413, 1207, 1391, 1406
BstNI CCWGG 1 cut(s) 582
BstNSI RCATGY 1 cut(s) 1409
BstPAI GACNNNNGTC 2 cut(s) 360, 377
BstSCI CCNGG 1 cut(s) 580
BstSFI CTRYAG 1 cut(s) 438
BstSLI GKGCMC 1 cut(s) 1103
BstV1I GCAGC 1 cut(s) 403
BstV2I GAAGAC 1 cut(s) 356
BstX2I RGATCY 2 cut(s) 170, 823
BstXI CCANNNNNNTGG 3 cut(s) 359, 502, 1426
BstYI RGATCY 2 cut(s) 170, 823
BsuI GTATCC 1 cut(s) 605
BsuRI GGCC 4 cut(s) 221, 351, 1210, 1364
BtgZI GCGATG 1 cut(s) 20
BtsCI GGATG 2 cut(s) 222, 1415
BtsI GCAGTG 1 cut(s) 1150
BtsIMutI CAGTG 2 cut(s) 285, 1150
BveI ACCTGC 2 cut(s) 236, 1178
Cac8I GCNNGC 5 cut(s) 200, 438, 466, 1103, 1383
CaiI CAGNNNCTG 1 cut(s) 313
Cfr13I GGNCC 2 cut(s) 179, 788
Csp6I GTAC 1 cut(s) 1115
CviAII CATG 5 cut(s) 41, 353, 664, 1270, 1406
CviQI GTAC 1 cut(s) 1115
DdeI CTNAG 4 cut(s) 99, 167, 867, 891
DpnI GATC 3 cut(s) 172, 306, 825
DpnII GATC 3 cut(s) 170, 304, 823
DriI GACNNNNNGTC 1 cut(s) 870
EaeI YGGCCR 2 cut(s) 349, 1208
Eam1104I CTCTTC 1 cut(s) 855
Eam1105I GACNNNNNGTC 1 cut(s) 870
EarI CTCTTC 1 cut(s) 855
Eco130I CCWWGG 3 cut(s) 15, 1071, 1365
Eco147I AGGCCT 1 cut(s) 1364
Eco47I GGWCC 2 cut(s) 179, 788
Eco57I CTGAAG 2 cut(s) 309, 1407
EcoNI CCTNNNNNAGG 1 cut(s) 243
EcoO109I RGGNCCY 1 cut(s) 179
EcoRI GAATTC 2 cut(s) 234, 1162
EcoRII CCWGG 1 cut(s) 580
EcoT14I CCWWGG 3 cut(s) 15, 1071, 1365
EcoT22I ATGCAT 1 cut(s) 678
ErhI CCWWGG 3 cut(s) 15, 1071, 1365
Esp3I CGTCTC 1 cut(s) 1290
FaeI CATG 5 cut(s) 44, 356, 667, 1273, 1409
FaqI GGGAC 1 cut(s) 987
FatI CATG 5 cut(s) 40, 352, 663, 1269, 1405
FauI CCCGC 1 cut(s) 1110
Fnu4HI GCNGC 1 cut(s) 417
FokI GGATG 2 cut(s) 209, 1402
Fsp4HI GCNGC 1 cut(s) 417
FspBI CTAG 1 cut(s) 95
GluI GCNGC 1 cut(s) 417
HaeIII GGCC 4 cut(s) 221, 351, 1210, 1364
HapII CCGG 3 cut(s) 368, 420, 1052
Hin1I GRCGYC 2 cut(s) 273, 645
Hin1II CATG 5 cut(s) 44, 356, 667, 1273, 1409
HincII GTYRAC 1 cut(s) 139
HindII GTYRAC 1 cut(s) 139
HindIII AAGCTT 4 cut(s) 690, 953, 1310, 1379
HinfI GANTC 6 cut(s) 513, 577, 728, 887, 1034, 1441
HpaII CCGG 3 cut(s) 368, 420, 1052
HphI GGTGA 3 cut(s) 349, 382, 936
Hpy166II GTNNAC 1 cut(s) 139
Hpy188I TCNGA 2 cut(s) 388, 1013
Hpy188III TCNNGA 2 cut(s) 1144, 1291
Hpy8I GTNNAC 1 cut(s) 139
Hpy99I CGWCG 3 cut(s) 197, 644, 647
HpyAV CCTTC 2 cut(s) 850, 1324
HpyCH4IV ACGT 3 cut(s) 273, 645, 915
HpyF10VI GCNNNNNNNGC 4 cut(s) 413, 1207, 1391, 1406
HpyF3I CTNAG 4 cut(s) 99, 167, 867, 891
HpySE526I ACGT 3 cut(s) 273, 645, 915
Hsp92I GRCGYC 2 cut(s) 273, 645
Hsp92II CATG 5 cut(s) 44, 356, 667, 1273, 1409
Kzo9I GATC 3 cut(s) 170, 304, 823
LmnI GCTCC 6 cut(s) 108, 322, 771, 895, 1108, 1405
Lsp1109I GCAGC 1 cut(s) 403
LweI GCATC 3 cut(s) 250, 709, 1381
MaeI CTAG 1 cut(s) 95
MaeII ACGT 3 cut(s) 273, 645, 915
MaeIII GTNAC 4 cut(s) 283, 309, 370, 942
MalI GATC 3 cut(s) 172, 306, 825
MboI GATC 3 cut(s) 170, 304, 823
MboII GAAGA 7 cut(s) 269, 356, 539, 844, 872, 1387, 1400
MfeI CAATTG 2 cut(s) 783, 812
MflI RGATCY 2 cut(s) 170, 823
MhlI GDGCHC 1 cut(s) 1103
MlsI TGGCCA 2 cut(s) 351, 1210
MluNI TGGCCA 2 cut(s) 351, 1210
MlyI GAGTC 3 cut(s) 507, 737, 1043
MmeI TCCRAC 2 cut(s) 1114, 1139
Mox20I TGGCCA 2 cut(s) 351, 1210
Mph1103I ATGCAT 1 cut(s) 678
MscI TGGCCA 2 cut(s) 351, 1210
MseI TTAA 2 cut(s) 1119, 1317
MslI CAYNNNNRTG 2 cut(s) 500, 1268
Msp20I TGGCCA 2 cut(s) 351, 1210
MspA1I CMGCKG 1 cut(s) 416
MspI CCGG 3 cut(s) 368, 420, 1052
MspR9I CCNGG 1 cut(s) 582
MunI CAATTG 2 cut(s) 783, 812
MvaI CCWGG 1 cut(s) 582
MwoI GCNNNNNNNGC 4 cut(s) 413, 1207, 1391, 1406
NdeII GATC 3 cut(s) 170, 304, 823
NlaIII CATG 5 cut(s) 44, 356, 667, 1273, 1409
NlaIV GGNNCC 6 cut(s) 13, 181, 318, 825, 897, 1100
NmuCI GTSAC 3 cut(s) 283, 370, 942
NsiI ATGCAT 1 cut(s) 678
NspI RCATGY 1 cut(s) 1409
NspV TTCGAA 2 cut(s) 251, 625
OliI CACNNNNGTG 1 cut(s) 500
PaqCI CACCTGC 1 cut(s) 1178
PceI AGGCCT 1 cut(s) 1364
PcsI WCGNNNNNNNCGW 1 cut(s) 522
PfeI GAWTC 3 cut(s) 577, 887, 1441
PflFI GACNNNGTC 1 cut(s) 644
PflMI CCANNNNNTGG 1 cut(s) 1133
PfoI TCCNGGA 1 cut(s) 580
PkrI GCNGC 1 cut(s) 418
PleI GAGTC 3 cut(s) 507, 736, 1042
PpsI GAGTC 3 cut(s) 507, 736, 1042
PpuMI RGGWCCY 1 cut(s) 179
PshAI GACNNNNGTC 2 cut(s) 360, 377
Psp5II RGGWCCY 1 cut(s) 179
Psp6I CCWGG 1 cut(s) 580
PspGI CCWGG 1 cut(s) 580
PspN4I GGNNCC 6 cut(s) 13, 181, 318, 825, 897, 1100
PspPI GGNCC 2 cut(s) 179, 788
PspPPI RGGWCCY 1 cut(s) 179
PstI CTGCAG 1 cut(s) 442
PstNI CAGNNNCTG 1 cut(s) 313
PsuI RGATCY 2 cut(s) 170, 823
PsyI GACNNNGTC 1 cut(s) 644
PvuII CAGCTG 1 cut(s) 416
RsaI GTAC 1 cut(s) 1116
RsaNI GTAC 1 cut(s) 1115
RseI CAYNNNNRTG 2 cut(s) 500, 1268
SaqAI TTAA 2 cut(s) 1119, 1317
SatI GCNGC 1 cut(s) 417
Sau3AI GATC 3 cut(s) 170, 304, 823
Sau96I GGNCC 2 cut(s) 179, 788
ScaI AGTACT 1 cut(s) 1116
SchI GAGTC 3 cut(s) 507, 737, 1043
ScrFI CCNGG 1 cut(s) 582
SduI GDGCHC 1 cut(s) 1103
SfaNI GCATC 3 cut(s) 250, 709, 1381
SfcI CTRYAG 1 cut(s) 438
SfuI TTCGAA 2 cut(s) 251, 625
SinI GGWCC 2 cut(s) 179, 788
SmiMI CAYNNNNRTG 2 cut(s) 500, 1268
SmlI CTYRAG 2 cut(s) 174, 732
SmoI CTYRAG 2 cut(s) 174, 732
SseBI AGGCCT 1 cut(s) 1364
SsiI CCGC 3 cut(s) 935, 1103, 1155
SspMI CTAG 1 cut(s) 95
StuI AGGCCT 1 cut(s) 1364
StyD4I CCNGG 1 cut(s) 580
StyI CCWWGG 3 cut(s) 15, 1071, 1365
TaiI ACGT 3 cut(s) 276, 648, 918
TaqI TCGA 7 cut(s) 90, 192, 216, 251, 525, 625, 1166
TatI WGTACW 1 cut(s) 1114
TfiI GAWTC 3 cut(s) 577, 887, 1441
Tru1I TTAA 2 cut(s) 1119, 1317
Tru9I TTAA 2 cut(s) 1119, 1317
TscAI CASTG 2 cut(s) 292, 1157
TseFI GTSAC 3 cut(s) 283, 370, 942
TseI GCWGC 1 cut(s) 416
Tsp45I GTSAC 3 cut(s) 283, 370, 942
TspDTI ATGAA 8 cut(s) 270, 602, 698, 984, 988, 1269, 1343, 1401
TspGWI ACGGA 1 cut(s) 587
TspRI CASTG 2 cut(s) 292, 1157
Tth111I GACNNNGTC 1 cut(s) 644
Van91I CCANNNNNTGG 1 cut(s) 1133
VpaK11BI GGWCC 2 cut(s) 179, 788
XagI CCTNNNNNAGG 1 cut(s) 243
XapI RAATTY 4 cut(s) 20, 234, 1162, 1461
XceI RCATGY 1 cut(s) 1409
XcmI CCANNNNNNNNNTGG 1 cut(s) 1130
XspI CTAG 1 cut(s) 95
ZraI GACGTC 2 cut(s) 274, 646
ZrmI AGTACT 1 cut(s) 1116
Zsp2I ATGCAT 1 cut(s) 678
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.