Prupe.3G189100_v2.0.a1

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000097
Physical Location & Seq
Forward (+)
20231833 .. 20238578
6746 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G189100.1

Sequence Viewer

Length: 1497 bp
ATGGATTCAAAAGAAGTAGCTACTAAGCCACATGCTGTTTGCATTCCAGTTCCTGCTCAAAGTCATATCAAGGCAATGCTTAAATTTGCGAAGCTCCTCCACCACAGAGGTTTTCATATAACATTCGTTAACACAGAGTTCAATCACAAGCGCTTTCTTAAATCTCTAGGACCCAATGCCCTTGATGGCTTGCCTGATTTTCAATTCGAAGCCATCCCGGATAGCCTTCCGGATTCAGATGAAGATGCCACACAAGATGTCACCTTGCTTTGTGAATCCATCAGAAAACAAAATTTCTTGGCTCCCTTTCTTGCCCTCCTTGCAAAACTCAACAATGATGCCATATCAACATCCAGCAATCCTCCTGTGACTTGCATAGTTGTTAGAGTTTTAGGATCTGACAATCCTCCTGTGACTTGCATAGTTTCAGATGGTTTCATGTCCACGTTCACAATCACAGCTGCAGAAGAAATCGGAGTCCCTATAGTGCTGTTCTACACTATAGCTGCCTGCAGCTTCATGGGATTTAAACAAATTCGTGCTTTGGTCGAAAAAGGACTTGCACCACTCAAAGATGAGAGCTGTTTCACAAATGGCTATCTGGACACCGTAATAGATTGGATCCCAGGAATGAGAGATATCCGTTTAAGGGATCTCCCGACCTTCTTTCGTACCACAAATCCGGATGACATCATGTTTAACTTCATCATGGAAGAAACCGATAGAGCTCATGAAGCTTCAGCAATCATTATTCATACTTTTGATGCCTTGGAGCCAGATGTTTTGGATGCTCTCTCATCTATGCTTCCCCATGTATACACCGTTGGCCCTCTTCAATTGCATCTCAATCAGATACCAGAACACCCTTTGAAAATGGGATACAGTCTATGGAAAGAAGAAACTGAATGCCTCGAGTGGCTAAACACCAAGGCACCAAACTCAGTTGTCTATGTGAATTTCGGAAGTATAGCGGTCGTGAAGCCAGAACAGCTTGTGGAGTTTGGGTGGGCACTTGCAAATAGCAAGCTTCCATTCTTTTGGGTAATTAGACCTGATCTTGTTATTGGAGAATCGGCTATTTTGCCGCCAGAGTTTGTGGCTGAAACAAAGGAAAGAGGTCTAATAGCTGGGTGGTGCCCACAAGAGCAAGTCCTTAACCACCCATCAGTTGGAGGATTTTTAACGCACAGCGGTTGGAATTCAACAGTTGAGAGCATTACTGCAGGAGTTCCTATGCTCTGTTGGCCATTCTTCGGAGACCAGCAAATGGACTGTCGCTATACTTGCAATGAATGGGGCATTGGCATGGAGATTAGTAATGATGTGAAGAGGGATGAGGTAGAGAAACTTGTCAAAGAGTTGATGGAAGGTGAGAAGGGTAAGAAGATGAAAAATAAGGTCATGAAGTGGAAGAAACTTGCAGAAGATGCTACTGGTCCACATGGTTCTTCATTCACAAACTTAGACAATTTAGTGAATCAAATGCTATTGAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

499

Amino Acids

55.7

Weight (kDa)

5.2

Isoelectric Point (pI)

34.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 931, 1134
AccB7I CCANNNNNTGG 2 cut(s) 1169, 1267
AccI GTMKAC 1 cut(s) 816
AccIII TCCGGA 2 cut(s) 229, 682
AciI CCGC 3 cut(s) 971, 1085, 1191
AclWI GGATC 4 cut(s) 403, 616, 629, 660
AcoI YGGCCR 1 cut(s) 1244
AcsI RAATTY 5 cut(s) 83, 292, 534, 955, 1198
AcuI CTGAAG 1 cut(s) 723
AfaI GTAC 1 cut(s) 673
AfeI AGCGCT 1 cut(s) 152
AfiI CCNNNNNNNGG 4 cut(s) 649, 1169, 1253, 1267
AgsI TTSAA 6 cut(s) 9, 142, 203, 836, 871, 1203
AjnI CCWGG 1 cut(s) 625
AjuI GAANNNNNNNTTGG 2 cut(s) 1284, 1316
Alw21I GWGCWC 1 cut(s) 730
Alw26I GTCTC 1 cut(s) 1251
AlwI GGATC 4 cut(s) 403, 616, 629, 660
AlwNI CAGNNNCTG 1 cut(s) 53
Ama87I CYCGRG 1 cut(s) 911
Aor13HI TCCGGA 2 cut(s) 229, 682
Aor51HI AGCGCT 1 cut(s) 152
AoxI GGCC 2 cut(s) 826, 1244
ApeKI GCWGC 3 cut(s) 461, 506, 513
ApoI RAATTY 5 cut(s) 83, 292, 534, 955, 1198
ArsI GACNNNNNNTTYG 2 cut(s) 1258, 1290
AspLEI GCGC 1 cut(s) 153
AspS9I GGNCC 3 cut(s) 170, 827, 1436
AsuC2I CCSGG 1 cut(s) 218
AsuHPI GGTGA 2 cut(s) 253, 1382
AsuII TTCGAA 1 cut(s) 207
AvaI CYCGRG 1 cut(s) 911
AvaII GGWCC 2 cut(s) 170, 1436
BaeGI GKGCMC 2 cut(s) 1012, 1139
BalI TGGCCA 1 cut(s) 1246
BamHI GGATCC 1 cut(s) 621
BanI GGYRCC 2 cut(s) 931, 1134
BanII GRGCYC 1 cut(s) 730
Bbv12I GWGCWC 1 cut(s) 730
BbvI GCAGC 3 cut(s) 448, 493, 525
BccI CCATC 6 cut(s) 179, 221, 287, 425, 1171, 1357
BciT130I CCWGG 1 cut(s) 627
BciVI GTATCC 1 cut(s) 872
BcnI CCSGG 1 cut(s) 218
BcoDI GTCTC 1 cut(s) 1251
BfaI CTAG 1 cut(s) 167
BfmI CTRYAG 5 cut(s) 462, 483, 501, 511, 1221
BfoI RGCGCY 1 cut(s) 154
BfuI GTATCC 1 cut(s) 872
BisI GCNGC 4 cut(s) 462, 507, 514, 1085
BlsI GCNGC 4 cut(s) 463, 508, 515, 1086
Bme1390I CCNGG 2 cut(s) 218, 627
Bme18I GGWCC 2 cut(s) 170, 1436
BmeT110I CYCGRG 1 cut(s) 911
BmgT120I GGNCC 3 cut(s) 170, 827, 1436
BmiI GGNNCC 6 cut(s) 172, 303, 623, 774, 933, 1136
BmrFI CCNGG 2 cut(s) 218, 627
BmsI GCATC 6 cut(s) 235, 328, 754, 778, 850, 1417
Bpu14I TTCGAA 1 cut(s) 207
BpuMI CCSGG 1 cut(s) 218
BsaI GGTCTC 1 cut(s) 1251
BsaJI CCNNGG 3 cut(s) 625, 768, 927
BsaWI WCCGGW 2 cut(s) 229, 682
BsaXI ACNNNNNCTCC 2 cut(s) 989, 1019
Bsc4I CCNNNNNNNGG 4 cut(s) 649, 1169, 1253, 1267
Bse1I ACTGG 2 cut(s) 47, 1438
Bse3DI GCAATG 2 cut(s) 81, 1294
BseAI TCCGGA 2 cut(s) 229, 682
BseBI CCWGG 1 cut(s) 627
BseDI CCNNGG 3 cut(s) 625, 768, 927
BseGI GGATG 5 cut(s) 213, 350, 691, 793, 1339
BseLI CCNNNNNNNGG 4 cut(s) 649, 1169, 1253, 1267
BseMI GCAATG 2 cut(s) 81, 1294
BseMII CTCAG 1 cut(s) 954
BseNI ACTGG 2 cut(s) 47, 1438
BseRI GAGGAG 1 cut(s) 86
BseSI GKGCMC 2 cut(s) 1012, 1139
BseXI GCAGC 3 cut(s) 448, 493, 525
BseYI CCCAGC 1 cut(s) 1127
Bsh1285I CGRYCG 1 cut(s) 975
BshFI GGCC 2 cut(s) 828, 1246
BshNI GGYRCC 2 cut(s) 931, 1134
BsiEI CGRYCG 1 cut(s) 975
BsiHKAI GWGCWC 1 cut(s) 730
BsiHKCI CYCGRG 1 cut(s) 911
BsiSI CCGG 3 cut(s) 218, 230, 683
BslFI GGGAC 1 cut(s) 464
BslI CCNNNNNNNGG 4 cut(s) 649, 1169, 1253, 1267
BsmAI GTCTC 1 cut(s) 1251
BsmFI GGGAC 1 cut(s) 464
BsmI GAATGC 2 cut(s) 42, 911
BsnI GGCC 2 cut(s) 828, 1246
Bso31I GGTCTC 1 cut(s) 1251
BsoBI CYCGRG 1 cut(s) 911
Bsp119I TTCGAA 1 cut(s) 207
Bsp1286I GDGCHC 3 cut(s) 730, 1012, 1139
Bsp13I TCCGGA 2 cut(s) 229, 682
Bsp143I GATC 4 cut(s) 395, 621, 652, 1054
BspACI CCGC 3 cut(s) 971, 1085, 1191
BspANI GGCC 2 cut(s) 828, 1246
BspCNI CTCAG 1 cut(s) 953
BspEI TCCGGA 2 cut(s) 229, 682
BspHI TCATGA 2 cut(s) 730, 1401
BspLI GGNNCC 6 cut(s) 172, 303, 623, 774, 933, 1136
BspMAI CTGCAG 3 cut(s) 466, 515, 1225
BspPI GGATC 4 cut(s) 403, 616, 629, 660
BspT104I TTCGAA 1 cut(s) 207
BspT107I GGYRCC 2 cut(s) 931, 1134
BspTNI GGTCTC 1 cut(s) 1251
BsrDI GCAATG 2 cut(s) 81, 1294
BsrI ACTGG 2 cut(s) 47, 1438
BssECI CCNNGG 3 cut(s) 625, 768, 927
BssMI GATC 4 cut(s) 395, 621, 652, 1054
BssNAI GTATAC 1 cut(s) 817
BssT1I CCWWGG 2 cut(s) 768, 927
Bst1107I GTATAC 1 cut(s) 817
Bst2UI CCWGG 1 cut(s) 627
Bst4CI ACNGT 5 cut(s) 610, 823, 884, 1207, 1274
Bst6I CTCTTC 2 cut(s) 837, 1322
BstAPI GCANNNNNTGC 1 cut(s) 1427
BstBI TTCGAA 1 cut(s) 207
BstC8I GCNNGC 3 cut(s) 191, 511, 1025
BstDEI CTNAG 3 cut(s) 24, 940, 1462
BstF5I GGATG 5 cut(s) 213, 350, 691, 793, 1339
BstH2I RGCGCY 1 cut(s) 154
BstHHI GCGC 1 cut(s) 153
BstKTI GATC 4 cut(s) 398, 624, 655, 1057
BstMAI GTCTC 1 cut(s) 1251
BstMBI GATC 4 cut(s) 395, 621, 652, 1054
BstMCI CGRYCG 1 cut(s) 975
BstMWI GCNNNNNNNGC 6 cut(s) 320, 734, 988, 1243, 1284, 1427
BstNI CCWGG 1 cut(s) 627
BstNSI RCATGY 1 cut(s) 35
BstSCI CCNGG 2 cut(s) 216, 625
BstSFI CTRYAG 5 cut(s) 462, 483, 501, 511, 1221
BstSLI GKGCMC 2 cut(s) 1012, 1139
BstV1I GCAGC 3 cut(s) 448, 493, 525
BstX2I RGATCY 3 cut(s) 395, 621, 652
BstXI CCANNNNNNTGG 1 cut(s) 1038
BstYI RGATCY 3 cut(s) 395, 621, 652
BstZ17I GTATAC 1 cut(s) 817
BsuI GTATCC 1 cut(s) 872
BsuRI GGCC 2 cut(s) 828, 1246
BtsCI GGATG 5 cut(s) 213, 350, 691, 793, 1339
Cac8I GCNNGC 3 cut(s) 191, 511, 1025
CaiI CAGNNNCTG 1 cut(s) 53
CciI TCATGA 2 cut(s) 730, 1401
CfoI GCGC 1 cut(s) 153
Cfr13I GGNCC 3 cut(s) 170, 827, 1436
Csp6I GTAC 1 cut(s) 672
CviQI GTAC 1 cut(s) 672
DdeI CTNAG 3 cut(s) 24, 940, 1462
DpnI GATC 4 cut(s) 397, 623, 654, 1056
DpnII GATC 4 cut(s) 395, 621, 652, 1054
DraI TTTAAA 1 cut(s) 529
EaeI YGGCCR 1 cut(s) 1244
Eam1104I CTCTTC 2 cut(s) 837, 1322
EarI CTCTTC 2 cut(s) 837, 1322
Ecl136II GAGCTC 1 cut(s) 728
Eco130I CCWWGG 2 cut(s) 768, 927
Eco24I GRGCYC 1 cut(s) 730
Eco31I GGTCTC 1 cut(s) 1251
Eco32I GATATC 1 cut(s) 640
Eco47I GGWCC 2 cut(s) 170, 1436
Eco47III AGCGCT 1 cut(s) 152
Eco53kI GAGCTC 1 cut(s) 728
Eco57I CTGAAG 1 cut(s) 723
Eco88I CYCGRG 1 cut(s) 911
EcoICRI GAGCTC 1 cut(s) 728
EcoO109I RGGNCCY 1 cut(s) 170
EcoRI GAATTC 1 cut(s) 1198
EcoRII CCWGG 1 cut(s) 625
EcoRV GATATC 1 cut(s) 640
EcoT14I CCWWGG 2 cut(s) 768, 927
EcoT38I GRGCYC 1 cut(s) 730
ErhI CCWWGG 2 cut(s) 768, 927
FaqI GGGAC 1 cut(s) 464
FblI GTMKAC 1 cut(s) 816
Fnu4HI GCNGC 4 cut(s) 462, 507, 514, 1085
FokI GGATG 5 cut(s) 200, 337, 698, 800, 1346
FriOI GRGCYC 1 cut(s) 730
Fsp4HI GCNGC 4 cut(s) 462, 507, 514, 1085
FspBI CTAG 1 cut(s) 167
GlaI GCGC 1 cut(s) 152
GluI GCNGC 4 cut(s) 462, 507, 514, 1085
GsaI CCCAGC 1 cut(s) 1131
HaeII RGCGCY 1 cut(s) 154
HaeIII GGCC 2 cut(s) 828, 1246
HapII CCGG 3 cut(s) 218, 230, 683
HhaI GCGC 1 cut(s) 153
Hin6I GCGC 1 cut(s) 151
HinP1I GCGC 1 cut(s) 151
HincII GTYRAC 1 cut(s) 130
HindII GTYRAC 1 cut(s) 130
HindIII AAGCTT 2 cut(s) 735, 1025
HinfI GANTC 6 cut(s) 5, 233, 275, 477, 1070, 1477
HpaI GTTAAC 1 cut(s) 130
HpaII CCGG 3 cut(s) 218, 230, 683
HphI GGTGA 2 cut(s) 253, 1382
Hpy166II GTNNAC 5 cut(s) 130, 444, 450, 817, 1439
Hpy188I TCNGA 8 cut(s) 238, 284, 400, 430, 476, 852, 962, 1256
Hpy188III TCNNGA 7 cut(s) 230, 602, 658, 683, 731, 976, 1402
Hpy8I GTNNAC 5 cut(s) 130, 444, 450, 817, 1439
HpyAV CCTTC 4 cut(s) 236, 673, 1361, 1369
HpyCH4III ACNGT 5 cut(s) 610, 823, 884, 1207, 1274
HpyCH4IV ACGT 1 cut(s) 446
HpyF10VI GCNNNNNNNGC 6 cut(s) 320, 734, 988, 1243, 1284, 1427
HpyF3I CTNAG 3 cut(s) 24, 940, 1462
HpySE526I ACGT 1 cut(s) 446
HspAI GCGC 1 cut(s) 151
Kpn2I TCCGGA 2 cut(s) 229, 682
KspAI GTTAAC 1 cut(s) 130
Kzo9I GATC 4 cut(s) 395, 621, 652, 1054
LmnI GCTCC 3 cut(s) 99, 307, 772
Lsp1109I GCAGC 3 cut(s) 448, 493, 525
LweI GCATC 6 cut(s) 235, 328, 754, 778, 850, 1417
MaeI CTAG 1 cut(s) 167
MaeII ACGT 1 cut(s) 446
MaeIII GTNAC 3 cut(s) 259, 367, 412
MalI GATC 4 cut(s) 397, 623, 654, 1056
MboI GATC 4 cut(s) 395, 621, 652, 1054
MfeI CAATTG 1 cut(s) 836
MflI RGATCY 3 cut(s) 395, 621, 652
MhlI GDGCHC 3 cut(s) 730, 1012, 1139
MlsI TGGCCA 1 cut(s) 1246
MluCI AATT 9 cut(s) 83, 203, 292, 534, 836, 955, 1044, 1198, 1468
MluNI TGGCCA 1 cut(s) 1246
MlyI GAGTC 1 cut(s) 486
MmeI TCCRAC 2 cut(s) 1150, 1175
Mox20I TGGCCA 1 cut(s) 1246
MroI TCCGGA 2 cut(s) 229, 682
MscI TGGCCA 1 cut(s) 1246
MseI TTAA 8 cut(s) 81, 129, 159, 528, 647, 699, 1155, 1181
MslI CAYNNNNRTG 1 cut(s) 1304
Msp20I TGGCCA 1 cut(s) 1246
MspA1I CMGCKG 2 cut(s) 461, 1191
MspI CCGG 3 cut(s) 218, 230, 683
MspR9I CCNGG 2 cut(s) 218, 627
MunI CAATTG 1 cut(s) 836
Mva1269I GAATGC 2 cut(s) 42, 911
MvaI CCWGG 1 cut(s) 627
MwoI GCNNNNNNNGC 6 cut(s) 320, 734, 988, 1243, 1284, 1427
NciI CCSGG 1 cut(s) 218
NdeII GATC 4 cut(s) 395, 621, 652, 1054
NlaIV GGNNCC 6 cut(s) 172, 303, 623, 774, 933, 1136
NmuCI GTSAC 3 cut(s) 259, 367, 412
NspI RCATGY 1 cut(s) 35
NspV TTCGAA 1 cut(s) 207
PaeR7I CTCGAG 1 cut(s) 911
PagI TCATGA 2 cut(s) 730, 1401
PctI GAATGC 2 cut(s) 42, 911
PfeI GAWTC 5 cut(s) 5, 233, 275, 1070, 1477
PflMI CCANNNNNTGG 2 cut(s) 1169, 1267
PfoI TCCNGGA 1 cut(s) 216
PkrI GCNGC 4 cut(s) 463, 508, 515, 1086
PleI GAGTC 1 cut(s) 485
PpsI GAGTC 1 cut(s) 485
PpuMI RGGWCCY 1 cut(s) 170
Psp124BI GAGCTC 1 cut(s) 730
Psp5II RGGWCCY 1 cut(s) 170
Psp6I CCWGG 1 cut(s) 625
PspFI CCCAGC 1 cut(s) 1127
PspGI CCWGG 1 cut(s) 625
PspN4I GGNNCC 6 cut(s) 172, 303, 623, 774, 933, 1136
PspPI GGNCC 3 cut(s) 170, 827, 1436
PspPPI RGGWCCY 1 cut(s) 170
PspXI VCTCGAGB 1 cut(s) 911
PstI CTGCAG 3 cut(s) 466, 515, 1225
PstNI CAGNNNCTG 1 cut(s) 53
PsuI RGATCY 3 cut(s) 395, 621, 652
PvuII CAGCTG 1 cut(s) 461
RsaI GTAC 1 cut(s) 673
RsaNI GTAC 1 cut(s) 672
RseI CAYNNNNRTG 1 cut(s) 1304
SacI GAGCTC 1 cut(s) 730
SaqAI TTAA 8 cut(s) 81, 129, 159, 528, 647, 699, 1155, 1181
SatI GCNGC 4 cut(s) 462, 507, 514, 1085
Sau3AI GATC 4 cut(s) 395, 621, 652, 1054
Sau96I GGNCC 3 cut(s) 170, 827, 1436
SchI GAGTC 1 cut(s) 486
ScrFI CCNGG 2 cut(s) 218, 627
SduI GDGCHC 3 cut(s) 730, 1012, 1139
SfaNI GCATC 6 cut(s) 235, 328, 754, 778, 850, 1417
SfcI CTRYAG 5 cut(s) 462, 483, 501, 511, 1221
Sfr274I CTCGAG 1 cut(s) 911
SfuI TTCGAA 1 cut(s) 207
SinI GGWCC 2 cut(s) 170, 1436
SlaI CTCGAG 1 cut(s) 911
SmiMI CAYNNNNRTG 1 cut(s) 1304
SmlI CTYRAG 1 cut(s) 911
SmoI CTYRAG 1 cut(s) 911
Sse9I AATT 9 cut(s) 83, 203, 292, 534, 836, 955, 1044, 1198, 1468
SsiI CCGC 3 cut(s) 971, 1085, 1191
SspMI CTAG 1 cut(s) 167
SstI GAGCTC 1 cut(s) 730
StyD4I CCNGG 2 cut(s) 216, 625
StyI CCWWGG 2 cut(s) 768, 927
TaaI ACNGT 5 cut(s) 610, 823, 884, 1207, 1274
TaiI ACGT 1 cut(s) 449
TaqI TCGA 3 cut(s) 207, 549, 912
TasI AATT 9 cut(s) 83, 203, 292, 534, 836, 955, 1044, 1198, 1468
TauI GCSGC 1 cut(s) 1087
TfiI GAWTC 5 cut(s) 5, 233, 275, 1070, 1477
Tru1I TTAA 8 cut(s) 81, 129, 159, 528, 647, 699, 1155, 1181
Tru9I TTAA 8 cut(s) 81, 129, 159, 528, 647, 699, 1155, 1181
TseFI GTSAC 3 cut(s) 259, 367, 412
TseI GCWGC 3 cut(s) 461, 506, 513
Tsp45I GTSAC 3 cut(s) 259, 367, 412
TspGWI ACGGA 1 cut(s) 632
Van91I CCANNNNNTGG 2 cut(s) 1169, 1267
VpaK11BI GGWCC 2 cut(s) 170, 1436
XapI RAATTY 5 cut(s) 83, 292, 534, 955, 1198
XceI RCATGY 1 cut(s) 35
XcmI CCANNNNNNNNNTGG 1 cut(s) 1166
XhoI CTCGAG 1 cut(s) 911
XmiI GTMKAC 1 cut(s) 816
XspI CTAG 1 cut(s) 167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.