pycom13g19910

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
15845400 .. 15845960
561 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g19910.1

Sequence Viewer

Length: 561 bp
ATGCCGGAGCATCCTCTGCATACTACCGGATACGGTCTATGGAAAGAAGAAACTGAGTGCTTCAAATGGCTAAATTCCAAGTCCCTAAATTCGGTTGTTTATGTGAATTTTGGCAGTTTAGCGTTCGTAACACCGGAACAGCTTGTCGAGTTTGGTTGGGGACTAGCAAACAGCAAGCTTCCCTTCATTTGGGTAATCAGACCTGATCTTGTTGTTGGTGAATCTGTGATTTTGCCACCAGAGTTGGTCGCGGAGACTAAGGAAAGAGGTCTAATAGCAAGTTGGTGCCCTCAAGAACAAGTCCTTGAGCACCCATCAGTTGGAGGTTTTTTAACACACAGCGGTTGGAATTCGACCGTTGAGAGTCTATGCGCAGGTGTGCCTATGCTGTGTTGGCCATGCTCTAATGACCAGCCAACAAACTGTTGCTATGCGTGCAAGGAGTGGGGGGTTGGCATGGAGATTAGTAATGATGTGAAGAGAGATGAAGTAGAGAAGCTTGTTAAAGAGTTAATGGAAGGAGAGAAAGGTAAGAAGATGAAAAATAAGGTCATGGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

187

Amino Acids

20.89

Weight (kDa)

5.1

Isoelectric Point (pI)

36.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 19 - 179 1.2e-24 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 365
Acc16I TGCGCA 1 cut(s) 373
Acc36I ACCTGC 1 cut(s) 365
AccB1I GGYRCC 1 cut(s) 285
AccB7I CCANNNNNTGG 1 cut(s) 320
AccII CGCG 1 cut(s) 251
AciI CCGC 2 cut(s) 251, 342
AcoI YGGCCR 1 cut(s) 395
AcsI RAATTY 4 cut(s) 73, 88, 106, 349
AfiI CCNNNNNNNGG 3 cut(s) 91, 189, 320
AgsI TTSAA 1 cut(s) 64
AluBI AGCT 3 cut(s) 142, 178, 499
AluI AGCT 3 cut(s) 142, 178, 499
Alw21I GWGCWC 1 cut(s) 312
Alw26I GTCTC 1 cut(s) 248
AoxI GGCC 1 cut(s) 395
ApoI RAATTY 4 cut(s) 73, 88, 106, 349
AspLEI GCGC 1 cut(s) 374
AsuHPI GGTGA 1 cut(s) 230
BaeGI GKGCMC 1 cut(s) 290
BalI TGGCCA 1 cut(s) 397
BanI GGYRCC 1 cut(s) 285
Bbv12I GWGCWC 1 cut(s) 312
BccI CCATC 1 cut(s) 322
BciVI GTATCC 1 cut(s) 23
BcoDI GTCTC 1 cut(s) 248
BfaI CTAG 1 cut(s) 164
BfuAI ACCTGC 1 cut(s) 365
BfuI GTATCC 1 cut(s) 23
BmiI GGNNCC 1 cut(s) 287
BmsI GCATC 1 cut(s) 19
BpuEI CTTGAG 2 cut(s) 276, 326
BsaWI WCCGGW 2 cut(s) 26, 133
Bsc4I CCNNNNNNNGG 3 cut(s) 91, 189, 320
BseGI GGATG 1 cut(s) 10
BseLI CCNNNNNNNGG 3 cut(s) 91, 189, 320
BseMII CTCAG 1 cut(s) 45
BseSI GKGCMC 1 cut(s) 290
Bsh1236I CGCG 1 cut(s) 251
Bsh1285I CGRYCG 1 cut(s) 357
BshFI GGCC 1 cut(s) 397
BshNI GGYRCC 1 cut(s) 285
BsiEI CGRYCG 1 cut(s) 357
BsiHKAI GWGCWC 1 cut(s) 312
BsiSI CCGG 3 cut(s) 5, 27, 134
BslFI GGGAC 2 cut(s) 67, 174
BslI CCNNNNNNNGG 3 cut(s) 91, 189, 320
BsmAI GTCTC 1 cut(s) 248
BsmFI GGGAC 2 cut(s) 67, 174
BsnI GGCC 1 cut(s) 397
Bsp1286I GDGCHC 2 cut(s) 290, 312
Bsp143I GATC 1 cut(s) 205
BspACI CCGC 2 cut(s) 251, 342
BspANI GGCC 1 cut(s) 397
BspCNI CTCAG 1 cut(s) 46
BspFNI CGCG 1 cut(s) 251
BspLI GGNNCC 1 cut(s) 287
BspMI ACCTGC 1 cut(s) 365
BspT107I GGYRCC 1 cut(s) 285
BssMI GATC 1 cut(s) 205
Bst4CI ACNGT 3 cut(s) 35, 358, 425
Bst6I CTCTTC 1 cut(s) 473
BstAPI GCANNNNNTGC 1 cut(s) 16
BstC8I GCNNGC 2 cut(s) 176, 436
BstDEI CTNAG 2 cut(s) 54, 258
BstF5I GGATG 1 cut(s) 10
BstFNI CGCG 1 cut(s) 251
BstHHI GCGC 1 cut(s) 374
BstKTI GATC 1 cut(s) 208
BstMAI GTCTC 1 cut(s) 248
BstMBI GATC 1 cut(s) 205
BstMCI CGRYCG 1 cut(s) 357
BstMWI GCNNNNNNNGC 3 cut(s) 16, 394, 435
BstSLI GKGCMC 1 cut(s) 290
BstUI CGCG 1 cut(s) 251
BsuI GTATCC 1 cut(s) 23
BsuRI GGCC 1 cut(s) 397
BtsCI GGATG 1 cut(s) 10
BveI ACCTGC 1 cut(s) 365
Cac8I GCNNGC 2 cut(s) 176, 436
CfoI GCGC 1 cut(s) 374
CspCI CAANNNNNGTGG 2 cut(s) 225, 260
CviAII CATG 3 cut(s) 399, 457, 553
CviJI RGCY 6 cut(s) 70, 142, 178, 397, 415, 499
CviKI_1 RGCY 6 cut(s) 70, 142, 178, 397, 415, 499
DdeI CTNAG 2 cut(s) 54, 258
DpnI GATC 1 cut(s) 207
DpnII GATC 1 cut(s) 205
EaeI YGGCCR 1 cut(s) 395
Eam1104I CTCTTC 1 cut(s) 473
EarI CTCTTC 1 cut(s) 473
EcoRI GAATTC 1 cut(s) 349
FaeI CATG 3 cut(s) 402, 460, 556
FaiI YATR 9 cut(s) 21, 40, 102, 370, 386, 400, 432, 458, 554
FalI AAGNNNNNCTT 2 cut(s) 167, 199
FaqI GGGAC 2 cut(s) 67, 174
FatI CATG 3 cut(s) 398, 456, 552
FspBI CTAG 1 cut(s) 164
FspI TGCGCA 1 cut(s) 373
GlaI GCGC 1 cut(s) 373
HaeIII GGCC 1 cut(s) 397
HapII CCGG 3 cut(s) 5, 27, 134
HhaI GCGC 1 cut(s) 374
Hin1II CATG 3 cut(s) 402, 460, 556
Hin6I GCGC 1 cut(s) 372
HinP1I GCGC 1 cut(s) 372
HindIII AAGCTT 2 cut(s) 176, 497
HinfI GANTC 2 cut(s) 221, 364
HpaII CCGG 3 cut(s) 5, 27, 134
HphI GGTGA 1 cut(s) 230
Hpy188I TCNGA 1 cut(s) 200
Hpy188III TCNNGA 1 cut(s) 293
HpyAV CCTTC 2 cut(s) 193, 512
HpyCH4III ACNGT 3 cut(s) 35, 358, 425
HpyCH4V TGCA 2 cut(s) 19, 438
HpyF10VI GCNNNNNNNGC 3 cut(s) 16, 394, 435
HpyF3I CTNAG 2 cut(s) 54, 258
Hsp92II CATG 3 cut(s) 402, 460, 556
HspAI GCGC 1 cut(s) 372
Kzo9I GATC 1 cut(s) 205
LmnI GCTCC 1 cut(s) 7
LpnPI CCDG 7 cut(s) 18, 40, 147, 216, 252, 360, 425
LweI GCATC 1 cut(s) 19
MaeI CTAG 1 cut(s) 164
MaeIII GTNAC 1 cut(s) 127
MalI GATC 1 cut(s) 207
MboI GATC 1 cut(s) 205
MboII GAAGA 3 cut(s) 59, 490, 547
MhlI GDGCHC 2 cut(s) 290, 312
MlsI TGGCCA 1 cut(s) 397
MluCI AATT 4 cut(s) 73, 88, 106, 349
MluNI TGGCCA 1 cut(s) 397
MlyI GAGTC 1 cut(s) 373
MmeI TCCRAC 2 cut(s) 301, 326
MnlI CCTC 4 cut(s) 24, 260, 300, 317
Mox20I TGGCCA 1 cut(s) 397
MscI TGGCCA 1 cut(s) 397
MseI TTAA 3 cut(s) 332, 504, 512
Msp20I TGGCCA 1 cut(s) 397
MspA1I CMGCKG 1 cut(s) 342
MspI CCGG 3 cut(s) 5, 27, 134
MvnI CGCG 1 cut(s) 251
MwoI GCNNNNNNNGC 3 cut(s) 16, 394, 435
NdeII GATC 1 cut(s) 205
NlaIII CATG 3 cut(s) 402, 460, 556
NlaIV GGNNCC 1 cut(s) 287
NsbI TGCGCA 1 cut(s) 373
PaqCI CACCTGC 1 cut(s) 365
PfeI GAWTC 1 cut(s) 221
PflMI CCANNNNNTGG 1 cut(s) 320
PleI GAGTC 1 cut(s) 372
PpsI GAGTC 1 cut(s) 372
PspN4I GGNNCC 1 cut(s) 287
SaqAI TTAA 3 cut(s) 332, 504, 512
Sau3AI GATC 1 cut(s) 205
SchI GAGTC 1 cut(s) 373
SduI GDGCHC 2 cut(s) 290, 312
SetI ASST 9 cut(s) 144, 180, 205, 271, 328, 379, 501, 532, 552
SfaNI GCATC 1 cut(s) 19
SmlI CTYRAG 2 cut(s) 291, 305
SmoI CTYRAG 2 cut(s) 291, 305
Sse9I AATT 4 cut(s) 73, 88, 106, 349
SsiI CCGC 2 cut(s) 251, 342
SspMI CTAG 1 cut(s) 164
TaaI ACNGT 3 cut(s) 35, 358, 425
TaqI TCGA 2 cut(s) 147, 353
TasI AATT 4 cut(s) 73, 88, 106, 349
TfiI GAWTC 1 cut(s) 221
Tru1I TTAA 3 cut(s) 332, 504, 512
Tru9I TTAA 3 cut(s) 332, 504, 512
TspDTI ATGAA 3 cut(s) 175, 501, 554
Van91I CCANNNNNTGG 1 cut(s) 320
XapI RAATTY 4 cut(s) 73, 88, 106, 349
XspI CTAG 1 cut(s) 164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.