MD17G1124400.v1.1

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0000097
Physical Location & Seq
Reverse (-)
10812267 .. 10813837
1571 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1124400.v1.1.491

Sequence Viewer

Length: 1464 bp
ATGAGTTCCAATATTGTAGTCTGTAATAAGCCTCACACTGTATGCATTCCCCTTCCATTACAAAGCCATATAAAGGCTATGCTCAAGTTAGCAAAGCTCCTACACTACATAGGTTTTCATGTAACTTTTGTCAATACGGAGTTCAACCACAGGCACTTTCTTAAATCTTTAGGACCAAATTCTGTTGATGACTTCCCCGATTTTCGGTTTCAAACAATACCAGATGGCCTTCCAGATTCAGAGGCTGATGCAACAACCCAAAACATCCCTTTGTTATGTGATTCCATGAGAAAAAATTTCTTGGCTCCATTTCGTAACCTCCTCTTGAAACTCAATGAAGCGGCGAGTTCCAACAACAGTGTTGGACCTCCTGTGACTTCCATTGTTTCAGATGGTTTCATGCCTTTTGCCATCACAGCTGCTGAGGAACTTGGACTCCCTATCGCAGTGTTCTTCACTTTGGCTGCGGTCGGATTCATGAGTTGTAAGCAATACCCCACTTTGGTGGAAAAAGGACTTGCACCACTCAAAGATGAGAGTTATTTCACAAATGGTTTTCTGGATAAGGTCATAGATTGGATTCTAAGAGTAAAAGCTATCCGTTTAAGGGATCTTCCGGCTTCCTTTCAAACTACTAATCCCAATGACATCAATTTTAACTTCACCTTGGAAGCAGCTGTTGGAGTTCATAAAGCTTCAGCAGTTGTTGTTCATACTTTTGATGCGTTGGAGCCAGATGTTTTGGATGCTTTGTCATCTATGCTTCCACATGTTTATGTTGTTGGCCCTCTCCAGTTGCTTCTCAATCAGATACCAAAAGACCCTTTGGAGCCTATGGGTTACAGTCTGCGGAAAGAAGAAACAAAGTGCCTGGAATGGATAAACGCCAAGGCGCCAAATTCTGTTGTTTATGTGAATTTTGGCAGTTTAGCGGTTGTCACGGCACAACATCTTATTGAGTTTGGTTGGGGACTTGCAAATAGCAAGCTTCCATTCTTTTGGGTAATAAGACCTGATTTGGTAGCTGGTGAATCGACGATTTTTCCACCCGAGTTTGTGGCAGAAACTATGGAAAAAGGTCTAATAACAAGTTGGTGCCCACAAGAGCAAGTCCTTAACCATCCATCAGTTGGAGGGTTTTTAACACACAGTGGTTGGAATTCAACCATTGAGAGTCTGTCTGCTGGAGTGCCTATGCTCTGTTGTCCCTTATTCGGCGAACAACGAACAAATTGTCTCTATACTTGTAGTGAATGGGGTATTGGCATGGAGATCAGTAAGGATGCCAAGAGAGACGACGTCGAGAACATTGTCAAAGAGATGATTGTGGGAGAGACGGGTAAGAAAATGAAAAACAAGGCCATGGAGTTGAAGAAACTAGCAGAAAAGGCAACTGATCCACATGGCTCTTCATGGACCAACTTAGACTATTTAGTGAGTCAAGTGCTATTAAGGAAAGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

488

Amino Acids

53.88

Weight (kDa)

5.83

Isoelectric Point (pI)

34.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 234 - 460 2e-27 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1302
AccB1I GGYRCC 2 cut(s) 892, 1095
AccB7I CCANNNNNTGG 1 cut(s) 1130
AciI CCGC 4 cut(s) 341, 467, 850, 932
AclWI GGATC 2 cut(s) 618, 1391
AcsI RAATTY 5 cut(s) 178, 295, 898, 916, 1159
AcuI CTGAAG 1 cut(s) 681
AcyI GRCGYC 2 cut(s) 893, 1299
AdeI CACNNNGTG 1 cut(s) 1151
AfiI CCNNNNNNNGG 6 cut(s) 73, 204, 502, 607, 1130, 1214
AflIII ACRYGT 1 cut(s) 769
AgsI TTSAA 6 cut(s) 145, 212, 328, 629, 1164, 1372
AjnI CCWGG 1 cut(s) 870
AjuI GAANNNNNNNTTGG 4 cut(s) 663, 695, 1245, 1277
AleI CACNNNNGTG 1 cut(s) 503
AloI GAACNNNNNNTCC 2 cut(s) 420, 452
AluBI AGCT 7 cut(s) 97, 419, 596, 677, 695, 988, 1025
AluI AGCT 7 cut(s) 97, 419, 596, 677, 695, 988, 1025
Alw26I GTCTC 3 cut(s) 1241, 1287, 1328
AlwI GGATC 2 cut(s) 618, 1391
AlwNI CAGNNNCTG 2 cut(s) 245, 422
Ama87I CYCGRG 1 cut(s) 1049
AoxI GGCC 3 cut(s) 226, 784, 1359
ApeKI GCWGC 3 cut(s) 419, 464, 674
ApoI RAATTY 5 cut(s) 178, 295, 898, 916, 1159
ArsI GACNNNNNNTTYG 2 cut(s) 1219, 1251
AspLEI GCGC 1 cut(s) 895
AspS9I GGNCC 4 cut(s) 173, 365, 785, 1416
AsuHPI GGTGA 2 cut(s) 655, 1040
AvaI CYCGRG 1 cut(s) 1049
AvaII GGWCC 3 cut(s) 173, 365, 1416
BaeGI GKGCMC 1 cut(s) 1100
BanI GGYRCC 2 cut(s) 892, 1095
BbvCI CCTCAGC 1 cut(s) 423
BbvI GCAGC 3 cut(s) 406, 451, 686
BccI CCATC 5 cut(s) 218, 386, 419, 1128, 1132
BceAI ACGGC 1 cut(s) 957
BciT130I CCWGG 1 cut(s) 872
BcoDI GTCTC 3 cut(s) 1241, 1287, 1328
BfaI CTAG 2 cut(s) 1379, 1462
BfoI RGCGCY 1 cut(s) 896
BisI GCNGC 4 cut(s) 342, 420, 465, 675
BlsI GCNGC 4 cut(s) 343, 421, 466, 676
Bme1390I CCNGG 1 cut(s) 872
Bme18I GGWCC 3 cut(s) 173, 365, 1416
BmeT110I CYCGRG 1 cut(s) 1049
BmgT120I GGNCC 4 cut(s) 173, 365, 785, 1416
BmiI GGNNCC 5 cut(s) 306, 732, 831, 894, 1097
BmrFI CCNGG 1 cut(s) 872
BmsI GCATC 4 cut(s) 238, 712, 736, 1273
BpmI CTGGAG 2 cut(s) 776, 1206
Bpu10I CCTNAGC 1 cut(s) 423
BpuEI CTTGAG 1 cut(s) 68
BsaHI GRCGYC 2 cut(s) 893, 1299
BsaJI CCNNGG 3 cut(s) 666, 888, 1362
BsaXI ACNNNNNCTCC 2 cut(s) 420, 450
Bsc4I CCNNNNNNNGG 6 cut(s) 73, 204, 502, 607, 1130, 1214
Bse1I ACTGG 1 cut(s) 793
BseBI CCWGG 1 cut(s) 872
BseDI CCNNGG 3 cut(s) 666, 888, 1362
BseGI GGATG 4 cut(s) 264, 751, 1120, 1288
BseLI CCNNNNNNNGG 6 cut(s) 73, 204, 502, 607, 1130, 1214
BseMII CTCAG 1 cut(s) 414
BseNI ACTGG 1 cut(s) 793
BseRI GAGGAG 1 cut(s) 311
BseSI GKGCMC 1 cut(s) 1100
BseXI GCAGC 3 cut(s) 406, 451, 686
Bsh1285I CGRYCG 1 cut(s) 471
BshFI GGCC 3 cut(s) 228, 786, 1361
BshNI GGYRCC 2 cut(s) 892, 1095
BsiEI CGRYCG 1 cut(s) 471
BsiHKCI CYCGRG 1 cut(s) 1049
BsiSI CCGG 1 cut(s) 617
BslFI GGGAC 2 cut(s) 984, 1191
BslI CCNNNNNNNGG 6 cut(s) 73, 204, 502, 607, 1130, 1214
BsmAI GTCTC 3 cut(s) 1241, 1287, 1328
BsmBI CGTCTC 2 cut(s) 1287, 1328
BsmFI GGGAC 2 cut(s) 984, 1191
BsmI GAATGC 1 cut(s) 45
BsnI GGCC 3 cut(s) 228, 786, 1361
BsoBI CYCGRG 1 cut(s) 1049
Bsp1286I GDGCHC 1 cut(s) 1100
Bsp143I GATC 3 cut(s) 610, 1272, 1396
Bsp19I CCATGG 1 cut(s) 1362
BspACI CCGC 4 cut(s) 341, 467, 850, 932
BspANI GGCC 3 cut(s) 228, 786, 1361
BspCNI CTCAG 1 cut(s) 415
BspHI TCATGA 1 cut(s) 477
BspLI GGNNCC 5 cut(s) 306, 732, 831, 894, 1097
BspPI GGATC 2 cut(s) 618, 1391
BspQI GCTCTTC 1 cut(s) 1414
BspT107I GGYRCC 2 cut(s) 892, 1095
BsrI ACTGG 1 cut(s) 793
BssECI CCNNGG 3 cut(s) 666, 888, 1362
BssMI GATC 3 cut(s) 610, 1272, 1396
BssNI GRCGYC 2 cut(s) 893, 1299
BssT1I CCWWGG 3 cut(s) 666, 888, 1362
Bst2UI CCWGG 1 cut(s) 872
Bst4CI ACNGT 4 cut(s) 40, 359, 845, 1151
Bst6I CTCTTC 1 cut(s) 1414
BstACI GRCGYC 2 cut(s) 893, 1299
BstC8I GCNNGC 1 cut(s) 986
BstDEI CTNAG 3 cut(s) 423, 584, 1423
BstDSI CCRYGG 1 cut(s) 1362
BstF5I GGATG 4 cut(s) 264, 751, 1120, 1288
BstH2I RGCGCY 1 cut(s) 896
BstHHI GCGC 1 cut(s) 895
BstKTI GATC 3 cut(s) 613, 1275, 1399
BstMAI GTCTC 3 cut(s) 1241, 1287, 1328
BstMBI GATC 3 cut(s) 610, 1272, 1396
BstMCI CGRYCG 1 cut(s) 471
BstMWI GCNNNNNNNGC 2 cut(s) 416, 1388
BstNI CCWGG 1 cut(s) 872
BstNSI RCATGY 1 cut(s) 773
BstSCI CCNGG 1 cut(s) 870
BstSLI GKGCMC 1 cut(s) 1100
BstV1I GCAGC 3 cut(s) 406, 451, 686
BstX2I RGATCY 1 cut(s) 610
BstXI CCANNNNNNTGG 2 cut(s) 505, 999
BstYI RGATCY 1 cut(s) 610
BsuRI GGCC 3 cut(s) 228, 786, 1361
BtgI CCRYGG 1 cut(s) 1362
BtsCI GGATG 4 cut(s) 264, 751, 1120, 1288
BtsI GCAGTG 1 cut(s) 453
BtsIMutI CAGTG 4 cut(s) 36, 364, 453, 1156
Cac8I GCNNGC 1 cut(s) 986
CaiI CAGNNNCTG 2 cut(s) 245, 422
CciI TCATGA 1 cut(s) 477
CfoI GCGC 1 cut(s) 895
Cfr13I GGNCC 4 cut(s) 173, 365, 785, 1416
CviAII CATG 9 cut(s) 119, 286, 400, 478, 770, 1267, 1363, 1403, 1413
DdeI CTNAG 3 cut(s) 423, 584, 1423
DinI GGCGCC 1 cut(s) 894
DpnI GATC 3 cut(s) 612, 1274, 1398
DpnII GATC 3 cut(s) 610, 1272, 1396
DraIII CACNNNGTG 1 cut(s) 1151
Eam1104I CTCTTC 1 cut(s) 1414
EarI CTCTTC 1 cut(s) 1414
Eco130I CCWWGG 3 cut(s) 666, 888, 1362
Eco47I GGWCC 3 cut(s) 173, 365, 1416
Eco57I CTGAAG 1 cut(s) 681
Eco88I CYCGRG 1 cut(s) 1049
EcoRI GAATTC 1 cut(s) 1159
EcoRII CCWGG 1 cut(s) 870
EcoT14I CCWWGG 3 cut(s) 666, 888, 1362
EcoT22I ATGCAT 1 cut(s) 47
EgeI GGCGCC 1 cut(s) 894
EheI GGCGCC 1 cut(s) 894
ErhI CCWWGG 3 cut(s) 666, 888, 1362
Esp3I CGTCTC 2 cut(s) 1287, 1328
FaeI CATG 9 cut(s) 122, 289, 403, 481, 773, 1270, 1366, 1406, 1416
FaqI GGGAC 2 cut(s) 984, 1191
FatI CATG 9 cut(s) 118, 285, 399, 477, 769, 1266, 1362, 1402, 1412
Fnu4HI GCNGC 4 cut(s) 342, 420, 465, 675
FokI GGATG 4 cut(s) 251, 758, 1107, 1295
Fsp4HI GCNGC 4 cut(s) 342, 420, 465, 675
FspBI CTAG 2 cut(s) 1379, 1462
GlaI GCGC 1 cut(s) 894
GluI GCNGC 4 cut(s) 342, 420, 465, 675
GsuI CTGGAG 2 cut(s) 776, 1206
HaeII RGCGCY 1 cut(s) 896
HaeIII GGCC 3 cut(s) 228, 786, 1361
HapII CCGG 1 cut(s) 617
HhaI GCGC 1 cut(s) 895
Hin1I GRCGYC 2 cut(s) 893, 1299
Hin1II CATG 9 cut(s) 122, 289, 403, 481, 773, 1270, 1366, 1406, 1416
Hin6I GCGC 1 cut(s) 893
HinP1I GCGC 1 cut(s) 893
HindIII AAGCTT 2 cut(s) 693, 986
HinfI GANTC 8 cut(s) 236, 281, 435, 474, 580, 1031, 1174, 1438
HpaII CCGG 1 cut(s) 617
HphI GGTGA 2 cut(s) 655, 1040
Hpy188I TCNGA 4 cut(s) 241, 391, 473, 810
Hpy188III TCNNGA 5 cut(s) 233, 325, 478, 560, 1303
Hpy99I CGWCG 3 cut(s) 1039, 1301, 1304
HpyAV CCTTC 2 cut(s) 62, 239
HpyCH4III ACNGT 4 cut(s) 40, 359, 845, 1151
HpyCH4IV ACGT 1 cut(s) 1299
HpyCH4V TGCA 4 cut(s) 45, 251, 521, 977
HpyF10VI GCNNNNNNNGC 2 cut(s) 416, 1388
HpyF3I CTNAG 3 cut(s) 423, 584, 1423
HpySE526I ACGT 1 cut(s) 1299
Hsp92I GRCGYC 2 cut(s) 893, 1299
Hsp92II CATG 9 cut(s) 122, 289, 403, 481, 773, 1270, 1366, 1406, 1416
HspAI GCGC 1 cut(s) 893
KasI GGCGCC 1 cut(s) 892
Kzo9I GATC 3 cut(s) 610, 1272, 1396
LguI GCTCTTC 1 cut(s) 1414
LmnI GCTCC 4 cut(s) 102, 310, 730, 829
Lsp1109I GCAGC 3 cut(s) 406, 451, 686
LweI GCATC 4 cut(s) 238, 712, 736, 1273
MaeI CTAG 2 cut(s) 1379, 1462
MaeII ACGT 1 cut(s) 1299
MaeIII GTNAC 5 cut(s) 121, 314, 373, 839, 937
MalI GATC 3 cut(s) 612, 1274, 1398
MboI GATC 3 cut(s) 610, 1272, 1396
MboII GAAGA 5 cut(s) 445, 605, 869, 1384, 1401
MflI RGATCY 1 cut(s) 610
MhlI GDGCHC 1 cut(s) 1100
MluCI AATT 7 cut(s) 178, 295, 652, 898, 916, 1159, 1231
Mly113I GGCGCC 1 cut(s) 893
MlyI GAGTC 3 cut(s) 429, 1183, 1447
MmeI TCCRAC 7 cut(s) 343, 375, 451, 661, 708, 1111, 1136
MnlI CCTC 8 cut(s) 42, 235, 329, 332, 378, 418, 798, 1127
Mph1103I ATGCAT 1 cut(s) 47
MseI TTAA 6 cut(s) 162, 605, 657, 1116, 1142, 1451
MslI CAYNNNNRTG 2 cut(s) 503, 774
MspA1I CMGCKG 2 cut(s) 419, 677
MspI CCGG 1 cut(s) 617
MspR9I CCNGG 1 cut(s) 872
Mva1269I GAATGC 1 cut(s) 45
MvaI CCWGG 1 cut(s) 872
MwoI GCNNNNNNNGC 2 cut(s) 416, 1388
NarI GGCGCC 1 cut(s) 893
NcoI CCATGG 1 cut(s) 1362
NdeII GATC 3 cut(s) 610, 1272, 1396
NlaIII CATG 9 cut(s) 122, 289, 403, 481, 773, 1270, 1366, 1406, 1416
NlaIV GGNNCC 5 cut(s) 306, 732, 831, 894, 1097
NmuCI GTSAC 2 cut(s) 373, 937
NsiI ATGCAT 1 cut(s) 47
NspI RCATGY 1 cut(s) 773
OliI CACNNNNGTG 1 cut(s) 503
PagI TCATGA 1 cut(s) 477
PciI ACATGT 1 cut(s) 769
PciSI GCTCTTC 1 cut(s) 1414
PctI GAATGC 1 cut(s) 45
PfeI GAWTC 5 cut(s) 236, 281, 474, 580, 1031
PflFI GACNNNGTC 1 cut(s) 1298
PflMI CCANNNNNTGG 1 cut(s) 1130
PkrI GCNGC 4 cut(s) 343, 421, 466, 676
PleI GAGTC 3 cut(s) 429, 1182, 1446
PluTI GGCGCC 1 cut(s) 896
PpsI GAGTC 3 cut(s) 429, 1182, 1446
PscI ACATGT 1 cut(s) 769
Psp6I CCWGG 1 cut(s) 870
PspGI CCWGG 1 cut(s) 870
PspN4I GGNNCC 5 cut(s) 306, 732, 831, 894, 1097
PspPI GGNCC 4 cut(s) 173, 365, 785, 1416
PstNI CAGNNNCTG 2 cut(s) 245, 422
PsuI RGATCY 1 cut(s) 610
PsyI GACNNNGTC 1 cut(s) 1298
PvuII CAGCTG 2 cut(s) 419, 677
RseI CAYNNNNRTG 2 cut(s) 503, 774
SapI GCTCTTC 1 cut(s) 1414
SaqAI TTAA 6 cut(s) 162, 605, 657, 1116, 1142, 1451
SatI GCNGC 4 cut(s) 342, 420, 465, 675
Sau3AI GATC 3 cut(s) 610, 1272, 1396
Sau96I GGNCC 4 cut(s) 173, 365, 785, 1416
SchI GAGTC 3 cut(s) 429, 1183, 1447
ScrFI CCNGG 1 cut(s) 872
SduI GDGCHC 1 cut(s) 1100
SfaNI GCATC 4 cut(s) 238, 712, 736, 1273
SfoI GGCGCC 1 cut(s) 894
SinI GGWCC 3 cut(s) 173, 365, 1416
SmiMI CAYNNNNRTG 2 cut(s) 503, 774
SmlI CTYRAG 1 cut(s) 83
SmoI CTYRAG 1 cut(s) 83
Sse9I AATT 7 cut(s) 178, 295, 652, 898, 916, 1159, 1231
SsiI CCGC 4 cut(s) 341, 467, 850, 932
SspDI GGCGCC 1 cut(s) 892
SspI AATATT 1 cut(s) 13
SspMI CTAG 2 cut(s) 1379, 1462
StyD4I CCNGG 1 cut(s) 870
StyI CCWWGG 3 cut(s) 666, 888, 1362
TaaI ACNGT 4 cut(s) 40, 359, 845, 1151
TaiI ACGT 1 cut(s) 1302
TaqI TCGA 2 cut(s) 1034, 1302
TasI AATT 7 cut(s) 178, 295, 652, 898, 916, 1159, 1231
TauI GCSGC 1 cut(s) 344
TfiI GAWTC 5 cut(s) 236, 281, 474, 580, 1031
Tru1I TTAA 6 cut(s) 162, 605, 657, 1116, 1142, 1451
Tru9I TTAA 6 cut(s) 162, 605, 657, 1116, 1142, 1451
TscAI CASTG 4 cut(s) 43, 364, 453, 1156
TseFI GTSAC 2 cut(s) 373, 937
TseI GCWGC 3 cut(s) 419, 464, 674
Tsp45I GTSAC 2 cut(s) 373, 937
TspDTI ATGAA 8 cut(s) 107, 351, 388, 466, 677, 701, 1364, 1401
TspGWI ACGGA 2 cut(s) 152, 590
TspRI CASTG 4 cut(s) 43, 364, 453, 1156
Tth111I GACNNNGTC 1 cut(s) 1298
Van91I CCANNNNNTGG 1 cut(s) 1130
VpaK11BI GGWCC 3 cut(s) 173, 365, 1416
XapI RAATTY 5 cut(s) 178, 295, 898, 916, 1159
XceI RCATGY 1 cut(s) 773
XcmI CCANNNNNNNNNTGG 1 cut(s) 1127
XspI CTAG 2 cut(s) 1379, 1462
ZraI GACGTC 1 cut(s) 1300
Zsp2I ATGCAT 1 cut(s) 47
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.