Rorug02G0443700

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000097
Physical Location & Seq
Forward (+)
57008856 .. 57013991
5136 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0443700.1

Sequence Viewer

Length: 1275 bp
ATGCAGCACCAGAGGCTGAAGCAGCAGCAGCAGCAAGCTCTGATGCAACAGGCTCTTCTTCAGCAGCATTCTCTCTACCACCCCGGCCTCTTGGCTCCGCCTCAGATAGAGCCAATCCCAAGTGGAAATCTGCCTCCTGGTTTTGATCCAAGTACTTGCCGCAGTGTGTATGTTGGGAATATCCATACCCAGGTGACAGAACCACTTCTTCAAGAGGTTTTTGCAAGTACAGGTGCTGTTGAAAGCTGTAAACTTATAAGAAAGGAAAAGTCATCCTATGGGTTTGTCCACTATTTTGATCGCAGATCAGCCGCTCTTGCAATATTGTCTCTCAATGGAAGACAGCTGTTTGGACAGCCTATCAAGGTGAATTGGGCATATGCCAGTGGTCAGAGGGAAGATACATCAGGTCACTTCAACATTTTTGTAGGTGATCTCAGCCCTGAGGTTACTGATGCTACATTATTTGCATGCTTTTCTGTTTATTCCAGTTGTTCAGATGCAAGAGTTATGTGGGATCAGAAGACAGGGCGCTCTAGAGGCTTTGGGTTTGTCTCATTCCGGAGCCAACAGGATGCTCAAAGTGCAATAAATGACTTAAATGGTAAGTGGCTTGCCAGTAGACAGATACGTTGCAACTGGGCAACAAAAGGTGCTGGCACCAATGAGGATAAGCAGAGTTCAGATGCCAAGAGTGTGGTGGAACTAACAAATGGCTCCTCAGAAGACGGAAAAGAGGCAACTAACAATGAGGCTCCGGAGAACAACCCCCAATATACCACTGTCTACGTTGGCAATCTTGCTCCAGAGGTCACTCAGCTTGATCTTCATCGTCACTTTCACACTCTTGGTGTTGGAGTAATTGAAGAAGTTCGGCTTCAGCGTGATAAGGGTTTTGGGTTTGTCAGGTTCAATACCCATGCTGAGGCAGCTCTGGCTATACAGATGGGAAATTCTCAGTCGAATTTGTGTGGAAGACAAATAAAGTGCTCTTGGGGCAGCAAGCCTACTCCACCAGGAACAGTCTCAAACCCACTCCCTCCTCCAGCTGCAGCAGTGCCTATCCCGGGCCTCTCTGCAAGCGACCTACTGACCTATGAGCGGCAACTAGCAATGAGCAAGATGGGCGGTGTCCATGCCCTTATGCACCCCCAGGGACAGATCCCTCTTAAGCAGGGGGCAATGGGAATGGGCACTGCTGGAGCAAGCCAGGCTATATATGATGGTGGATTCCAGAATGTTGCTGCTGCCCAGCAGCTCATGTACTACCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

424

Amino Acids

46.19

Weight (kDa)

7.66

Isoelectric Point (pI)

49.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 56 - 122 4.1e-13 RNA recognition motif
RRM_1 PF00076 141 - 211 3.3e-18 RNA recognition motif
RRM_1 PF00076 262 - 328 2e-12 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 257
AccB1I GGYRCC 1 cut(s) 659
AccBSI CCGCTC 2 cut(s) 314, 1102
AccI GTMKAC 2 cut(s) 622, 786
AccIII TCCGGA 2 cut(s) 561, 757
AciI CCGC 5 cut(s) 98, 160, 312, 1102, 1128
AclWI GGATC 3 cut(s) 140, 525, 1156
AcsI RAATTY 2 cut(s) 952, 964
AcuI CTGAAG 3 cut(s) 38, 44, 863
AfaI GTAC 3 cut(s) 154, 229, 1265
AfiI CCNNNNNNNGG 4 cut(s) 190, 925, 1067, 1101
AflII CTTAAG 1 cut(s) 1169
AgsI TTSAA 5 cut(s) 212, 242, 418, 866, 913
AjnI CCWGG 5 cut(s) 136, 189, 1015, 1152, 1209
AluBI AGCT 7 cut(s) 38, 246, 346, 820, 932, 1049, 1258
AluI AGCT 7 cut(s) 38, 246, 346, 820, 932, 1049, 1258
Alw21I GWGCWC 1 cut(s) 992
Alw26I GTCTC 3 cut(s) 333, 559, 1030
AlwI GGATC 3 cut(s) 140, 525, 1156
AlwNI CAGNNNCTG 2 cut(s) 16, 236
Ama87I CYCGRG 1 cut(s) 1066
Aor13HI TCCGGA 2 cut(s) 561, 757
AoxI GGCC 2 cut(s) 85, 1069
ApoI RAATTY 2 cut(s) 952, 964
Asp700I GAANNNNTTC 2 cut(s) 204, 870
AspLEI GCGC 1 cut(s) 534
AspS9I GGNCC 1 cut(s) 1069
AsuC2I CCSGG 3 cut(s) 84, 1067, 1068
AsuHPI GGTGA 3 cut(s) 205, 379, 443
AvaI CYCGRG 1 cut(s) 1066
AxyI CCTNAGG 1 cut(s) 444
BaeGI GKGCMC 1 cut(s) 1196
BanI GGYRCC 1 cut(s) 659
BbsI GAAGAC 4 cut(s) 346, 530, 732, 982
Bbv12I GWGCWC 1 cut(s) 992
BbvCI CCTCAGC 1 cut(s) 924
BccI CCATC 3 cut(s) 940, 1117, 1217
BciT130I CCWGG 5 cut(s) 138, 191, 1017, 1154, 1211
BcnI CCSGG 3 cut(s) 84, 1067, 1068
BcoDI GTCTC 3 cut(s) 333, 559, 1030
BfaI CTAG 2 cut(s) 537, 1109
BfmI CTRYAG 1 cut(s) 1050
BfoI RGCGCY 1 cut(s) 535
BfrI CTTAAG 1 cut(s) 1169
BmcAI AGTACT 1 cut(s) 154
Bme1390I CCNGG 8 cut(s) 84, 138, 191, 1017, 1067, 1068, 1154, 1211
BmeT110I CYCGRG 1 cut(s) 1066
BmgT120I GGNCC 1 cut(s) 1069
BmiI GGNNCC 5 cut(s) 96, 566, 661, 718, 756
BmrFI CCNGG 8 cut(s) 84, 138, 191, 1017, 1067, 1068, 1154, 1211
BmrI ACTGGG 1 cut(s) 649
BmsI GCATC 5 cut(s) 33, 445, 490, 565, 676
BmuI ACTGGG 1 cut(s) 649
BpiI GAAGAC 4 cut(s) 346, 530, 732, 982
BpmI CTGGAG 3 cut(s) 789, 1029, 1221
Bpu10I CCTNAGC 1 cut(s) 924
BpuMI CCSGG 3 cut(s) 84, 1067, 1068
BsaBI GATNNNNATC 1 cut(s) 828
BsaJI CCNNGG 5 cut(s) 82, 189, 1066, 1152, 1153
BsaWI WCCGGW 2 cut(s) 561, 757
Bsc4I CCNNNNNNNGG 4 cut(s) 190, 925, 1067, 1101
Bse1I ACTGG 5 cut(s) 384, 489, 618, 644, 1270
Bse21I CCTNAGG 1 cut(s) 444
Bse3DI GCAATG 2 cut(s) 1119, 1188
Bse8I GATNNNNATC 1 cut(s) 828
BseAI TCCGGA 2 cut(s) 561, 757
BseBI CCWGG 5 cut(s) 138, 191, 1017, 1154, 1211
BseDI CCNNGG 5 cut(s) 82, 189, 1066, 1152, 1153
BseGI GGATG 2 cut(s) 272, 580
BseJI GATNNNNATC 1 cut(s) 828
BseLI CCNNNNNNNGG 4 cut(s) 190, 925, 1067, 1101
BseMI GCAATG 2 cut(s) 1119, 1188
BseMII CTCAG 7 cut(s) 116, 435, 451, 735, 830, 915, 971
BseNI ACTGG 5 cut(s) 384, 489, 618, 644, 1270
BseRI GAGGAG 2 cut(s) 709, 1032
BseSI GKGCMC 1 cut(s) 1196
BseYI CCCAGC 1 cut(s) 1251
BshFI GGCC 2 cut(s) 87, 1071
BshNI GGYRCC 1 cut(s) 659
BsiHKAI GWGCWC 1 cut(s) 992
BsiHKCI CYCGRG 1 cut(s) 1066
BsiSI CCGG 4 cut(s) 84, 562, 758, 1067
BslFI GGGAC 1 cut(s) 1170
BslI CCNNNNNNNGG 4 cut(s) 190, 925, 1067, 1101
BsmAI GTCTC 3 cut(s) 333, 559, 1030
BsmFI GGGAC 1 cut(s) 1170
BsmI GAATGC 1 cut(s) 67
BsnI GGCC 2 cut(s) 87, 1071
BsoBI CYCGRG 1 cut(s) 1066
Bsp1286I GDGCHC 2 cut(s) 992, 1196
Bsp13I TCCGGA 2 cut(s) 561, 757
Bsp143I GATC 7 cut(s) 145, 298, 305, 433, 517, 823, 1161
BspACI CCGC 5 cut(s) 98, 160, 312, 1102, 1128
BspANI GGCC 2 cut(s) 87, 1071
BspCNI CTCAG 7 cut(s) 115, 436, 450, 734, 829, 916, 970
BspEI TCCGGA 2 cut(s) 561, 757
BspLI GGNNCC 5 cut(s) 96, 566, 661, 718, 756
BspMAI CTGCAG 1 cut(s) 1054
BspPI GGATC 3 cut(s) 140, 525, 1156
BspQI GCTCTTC 1 cut(s) 60
BspT107I GGYRCC 1 cut(s) 659
BspTI CTTAAG 1 cut(s) 1169
BsrBI CCGCTC 2 cut(s) 314, 1102
BsrDI GCAATG 2 cut(s) 1119, 1188
BsrI ACTGG 5 cut(s) 384, 489, 618, 644, 1270
BssECI CCNNGG 5 cut(s) 82, 189, 1066, 1152, 1153
BssMI GATC 7 cut(s) 145, 298, 305, 433, 517, 823, 1161
Bst2UI CCWGG 5 cut(s) 138, 191, 1017, 1154, 1211
Bst4CI ACNGT 2 cut(s) 784, 1024
Bst6I CTCTTC 1 cut(s) 60
BstAFI CTTAAG 1 cut(s) 1169
BstC8I GCNNGC 7 cut(s) 36, 472, 615, 658, 1004, 1081, 1207
BstDEI CTNAG 7 cut(s) 102, 437, 444, 721, 816, 924, 957
BstF5I GGATG 2 cut(s) 272, 580
BstH2I RGCGCY 1 cut(s) 535
BstHHI GCGC 1 cut(s) 534
BstKTI GATC 7 cut(s) 148, 301, 308, 436, 520, 826, 1164
BstMAI GTCTC 3 cut(s) 333, 559, 1030
BstMBI GATC 7 cut(s) 145, 298, 305, 433, 517, 823, 1161
BstNI CCWGG 5 cut(s) 138, 191, 1017, 1154, 1211
BstNSI RCATGY 1 cut(s) 474
BstSCI CCNGG 8 cut(s) 82, 136, 189, 1015, 1065, 1066, 1152, 1209
BstSFI CTRYAG 1 cut(s) 1050
BstSLI GKGCMC 1 cut(s) 1196
BstV2I GAAGAC 4 cut(s) 346, 530, 732, 982
BstX2I RGATCY 1 cut(s) 1161
BstXI CCANNNNNNTGG 1 cut(s) 697
BstYI RGATCY 1 cut(s) 1161
Bsu36I CCTNAGG 1 cut(s) 444
BsuRI GGCC 2 cut(s) 87, 1071
BtsCI GGATG 2 cut(s) 272, 580
BtsI GCAGTG 3 cut(s) 169, 1062, 1194
BtsIMutI CAGTG 5 cut(s) 169, 391, 780, 1062, 1194
Cac8I GCNNGC 7 cut(s) 36, 472, 615, 658, 1004, 1081, 1207
CaiI CAGNNNCTG 2 cut(s) 16, 236
CfoI GCGC 1 cut(s) 534
Cfr13I GGNCC 1 cut(s) 1069
Cfr9I CCCGGG 1 cut(s) 1066
Csp6I GTAC 3 cut(s) 153, 228, 1264
CviAII CATG 4 cut(s) 471, 920, 1136, 1261
CviQI GTAC 3 cut(s) 153, 228, 1264
DdeI CTNAG 7 cut(s) 102, 437, 444, 721, 816, 924, 957
DpnI GATC 7 cut(s) 147, 300, 307, 435, 519, 825, 1163
DpnII GATC 7 cut(s) 145, 298, 305, 433, 517, 823, 1161
Eam1104I CTCTTC 1 cut(s) 60
EarI CTCTTC 1 cut(s) 60
EciI GGCGGA 1 cut(s) 87
Eco57I CTGAAG 3 cut(s) 38, 44, 863
Eco81I CCTNAGG 1 cut(s) 444
Eco88I CYCGRG 1 cut(s) 1066
EcoRII CCWGG 5 cut(s) 136, 189, 1015, 1152, 1209
FaeI CATG 4 cut(s) 474, 923, 1139, 1264
FalI AAGNNNNNCTT 2 cut(s) 861, 893
FaqI GGGAC 1 cut(s) 1170
FatI CATG 4 cut(s) 470, 919, 1135, 1260
FauNDI CATATG 1 cut(s) 379
FblI GTMKAC 2 cut(s) 622, 786
FokI GGATG 2 cut(s) 259, 587
FspBI CTAG 2 cut(s) 537, 1109
GlaI GCGC 1 cut(s) 533
GsaI CCCAGC 1 cut(s) 1255
GsuI CTGGAG 3 cut(s) 789, 1029, 1221
HaeII RGCGCY 1 cut(s) 535
HaeIII GGCC 2 cut(s) 87, 1071
HapII CCGG 4 cut(s) 84, 562, 758, 1067
HhaI GCGC 1 cut(s) 534
Hin1II CATG 4 cut(s) 474, 923, 1139, 1264
Hin6I GCGC 1 cut(s) 532
HinP1I GCGC 1 cut(s) 532
HinfI GANTC 1 cut(s) 1230
HpaII CCGG 4 cut(s) 84, 562, 758, 1067
HphI GGTGA 3 cut(s) 205, 379, 443
Hpy166II GTNNAC 4 cut(s) 251, 289, 623, 787
Hpy188I TCNGA 7 cut(s) 42, 105, 393, 499, 522, 685, 724
Hpy188III TCNNGA 6 cut(s) 212, 537, 562, 758, 806, 1234
Hpy8I GTNNAC 4 cut(s) 251, 289, 623, 787
HpyCH4III ACNGT 2 cut(s) 784, 1024
HpyCH4IV ACGT 2 cut(s) 631, 789
HpyF3I CTNAG 7 cut(s) 102, 437, 444, 721, 816, 924, 957
HpySE526I ACGT 2 cut(s) 631, 789
Hsp92II CATG 4 cut(s) 474, 923, 1139, 1264
HspAI GCGC 1 cut(s) 532
Kpn2I TCCGGA 2 cut(s) 561, 757
Kzo9I GATC 7 cut(s) 145, 298, 305, 433, 517, 823, 1161
LguI GCTCTTC 1 cut(s) 60
LmnI GCTCC 6 cut(s) 100, 564, 722, 760, 808, 1202
LweI GCATC 5 cut(s) 33, 445, 490, 565, 676
MaeI CTAG 2 cut(s) 537, 1109
MaeII ACGT 2 cut(s) 631, 789
MaeIII GTNAC 5 cut(s) 193, 410, 448, 811, 833
MalI GATC 7 cut(s) 147, 300, 307, 435, 519, 825, 1163
MbiI CCGCTC 2 cut(s) 314, 1102
MboI GATC 7 cut(s) 145, 298, 305, 433, 517, 823, 1161
MflI RGATCY 1 cut(s) 1161
MhlI GDGCHC 2 cut(s) 992, 1196
MluCI AATT 4 cut(s) 370, 861, 952, 964
MmeI TCCRAC 1 cut(s) 835
MroI TCCGGA 2 cut(s) 561, 757
MroXI GAANNNNTTC 2 cut(s) 204, 870
MseI TTAA 2 cut(s) 599, 1170
MspA1I CMGCKG 2 cut(s) 346, 1049
MspCI CTTAAG 1 cut(s) 1169
MspI CCGG 4 cut(s) 84, 562, 758, 1067
MspR9I CCNGG 8 cut(s) 84, 138, 191, 1017, 1067, 1068, 1154, 1211
Mva1269I GAATGC 1 cut(s) 67
MvaI CCWGG 5 cut(s) 138, 191, 1017, 1154, 1211
NciI CCSGG 3 cut(s) 84, 1067, 1068
NdeI CATATG 1 cut(s) 379
NdeII GATC 7 cut(s) 145, 298, 305, 433, 517, 823, 1161
NlaIII CATG 4 cut(s) 474, 923, 1139, 1264
NlaIV GGNNCC 5 cut(s) 96, 566, 661, 718, 756
NmuCI GTSAC 4 cut(s) 193, 410, 811, 833
NspI RCATGY 1 cut(s) 474
PaeI GCATGC 1 cut(s) 474
PasI CCCWGGG 1 cut(s) 1153
PciSI GCTCTTC 1 cut(s) 60
PcsI WCGNNNNNNNCGW 1 cut(s) 880
PctI GAATGC 1 cut(s) 67
PdmI GAANNNNTTC 2 cut(s) 204, 870
PfeI GAWTC 1 cut(s) 1230
PsiI TTATAA 1 cut(s) 257
Psp6I CCWGG 5 cut(s) 136, 189, 1015, 1152, 1209
PspFI CCCAGC 1 cut(s) 1251
PspGI CCWGG 5 cut(s) 136, 189, 1015, 1152, 1209
PspN4I GGNNCC 5 cut(s) 96, 566, 661, 718, 756
PspPI GGNCC 1 cut(s) 1069
PstI CTGCAG 1 cut(s) 1054
PstNI CAGNNNCTG 2 cut(s) 16, 236
PsuI RGATCY 1 cut(s) 1161
PvuII CAGCTG 2 cut(s) 346, 1049
RsaI GTAC 3 cut(s) 154, 229, 1265
RsaNI GTAC 3 cut(s) 153, 228, 1264
SapI GCTCTTC 1 cut(s) 60
SaqAI TTAA 2 cut(s) 599, 1170
Sau3AI GATC 7 cut(s) 145, 298, 305, 433, 517, 823, 1161
Sau96I GGNCC 1 cut(s) 1069
ScaI AGTACT 1 cut(s) 154
ScrFI CCNGG 8 cut(s) 84, 138, 191, 1017, 1067, 1068, 1154, 1211
SduI GDGCHC 2 cut(s) 992, 1196
SfaNI GCATC 5 cut(s) 33, 445, 490, 565, 676
SfcI CTRYAG 1 cut(s) 1050
SmaI CCCGGG 1 cut(s) 1068
SmlI CTYRAG 1 cut(s) 1169
SmoI CTYRAG 1 cut(s) 1169
SphI GCATGC 1 cut(s) 474
Sse9I AATT 4 cut(s) 370, 861, 952, 964
SsiI CCGC 5 cut(s) 98, 160, 312, 1102, 1128
SspI AATATT 1 cut(s) 324
SspMI CTAG 2 cut(s) 537, 1109
StyD4I CCNGG 8 cut(s) 82, 136, 189, 1015, 1065, 1066, 1152, 1209
TaaI ACNGT 2 cut(s) 784, 1024
TaiI ACGT 2 cut(s) 634, 792
TaqI TCGA 1 cut(s) 962
TasI AATT 4 cut(s) 370, 861, 952, 964
TatI WGTACW 3 cut(s) 152, 227, 1263
TauI GCSGC 3 cut(s) 162, 314, 1105
TfiI GAWTC 1 cut(s) 1230
Tru1I TTAA 2 cut(s) 599, 1170
Tru9I TTAA 2 cut(s) 599, 1170
TscAI CASTG 5 cut(s) 169, 391, 787, 1062, 1201
TseFI GTSAC 4 cut(s) 193, 410, 811, 833
Tsp45I GTSAC 4 cut(s) 193, 410, 811, 833
TspDTI ATGAA 1 cut(s) 818
TspGWI ACGGA 1 cut(s) 744
TspMI CCCGGG 1 cut(s) 1066
TspRI CASTG 5 cut(s) 169, 391, 787, 1062, 1201
Vha464I CTTAAG 1 cut(s) 1169
XapI RAATTY 2 cut(s) 952, 964
XbaI TCTAGA 1 cut(s) 536
XceI RCATGY 1 cut(s) 474
XcmI CCANNNNNNNNNTGG 1 cut(s) 697
XmaI CCCGGG 1 cut(s) 1066
XmiI GTMKAC 2 cut(s) 622, 786
XmnI GAANNNNTTC 2 cut(s) 204, 870
XspI CTAG 2 cut(s) 537, 1109
ZrmI AGTACT 1 cut(s) 154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.