RchiOBHm_Chr5g0029271

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000097
Physical Location & Seq
Forward (+)
22927344 .. 22928926
1583 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30867

Sequence Viewer

Length: 1440 bp
ATGGCTTCCGCTTATCATCATAAGCCTCATGCTGTTTGTATTCCAGTTCCATCTCAAAGCCACATAAAGGCTATGCTTAAATTAACCAAAATCCTCCACCACAGAGGCTTTCACATTACCTTTGTCAACACAGAATTCAACCACAAGCGATTTCTTAAGTCTCGAGGACCCAACTCCCTCGATGGCTTACCTGATTTTTACTTTGAAGCCATCCCTGATGGCATTCCGGAATCAGATGAAGATGCCGCCCAAATTGGCACTTTGATTGACTCTGTCAGAAATCATCTCTTGGCTCCATTTCGTGACCTCCTAATAAAACTAAACACTACTAGTCCTCCAGTGACTTGCATTGTTTCAGATGGTTTCGTGTCCACTTTTACTATGACAGCTGCAGAAGAACTTGGAATCCCAATTGCATTGTTCTACACTATTTCTGCTTGCAGCTTCATGGGATTCAGGAAATTCCGTACTTTGCTTGAGAAAGGGCTTGCACCACTTAAAGATGAGACCTGTGTGACAAATGGTTTTCTAGACAATGTTATAGAATGGATTCCAGAAAAGAAAGATATCCGTTTAAGGGATCTACCAAGCTTTTGTCGAACTACAGATCCAGATGACATCCTCTTCAACGCCACCATGGAAGCAGTCGAAAACGCAAATAAAGCTTCAGCTGTTGTTCTTCTCACATTTGATGCTTTGGAGAAAGATGTTTTGGAAGCTCTCTCCTCATCTATTTCTCCACCTGTTTATACAATTGGTCCTCTCCAACTGCTTCTAAATCAAATACCAGAAGATCCTTTGAAGCCTATGGGATACAGTCTTTGGAAGGAGGAAACCGAGTGTCTCCAATGGCTAAACTGCAAAGCACCGAACTCAATTGTTTATGTCAATTTTGGCAGTGTTGCGGTTTTGACTCCGGAACAACTTCTTGAGTTTGGTTGGGGACTTGCAAATACCAAGCTCCCCTTCTTCTGGGTTATTAGGCCTGATTTGGTTGCTGGAAAATCGGCAATCCTGCCGCCAGAGTTTGAAGCTGAAACCAAAGACAGAGGTCTAATAGCAAGTTGGTGCCCTCAAGAAGAAATCCTAAACCATCCATCAGTTGGAGGGTTTTTAACACACTGCGGTTGGAATTCAACCATTGAGAGTGTTACAGCTGGAGTGCCGATGCTGTGTTGGCCATTCTTTGCAGACCAGCAAACAAACAGTTACTACAGTTGCAACGAATGGGGAATTGGCATGGAGATCAACACTGATGTCAAGAGAGACGATGTAGAGAAGATTGTCAAAGAATTAATGGAGGAAGACAAGGGTAAGAAGTTGAAAAACAGGGCATTGCAGTGGAAGAAACTAGCTGAAGAAGCCACTGCTCCGCACGGTTCTTCATCAAAAAACTTGGACAATTGGGTAAATCAAGTCCTATTAAGAAAGCGCACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

479

Amino Acids

53.68

Weight (kDa)

5.47

Isoelectric Point (pI)

42.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 213 - 439 1.8e-25 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1068
AccB7I CCANNNNNTGG 1 cut(s) 1103
AccIII TCCGGA 2 cut(s) 226, 916
AciI CCGC 6 cut(s) 9, 246, 905, 1019, 1125, 1373
AclWI GGATC 3 cut(s) 588, 602, 788
AcoI YGGCCR 1 cut(s) 1178
AcsI RAATTY 3 cut(s) 134, 461, 1132
AcuI CTGAAG 2 cut(s) 651, 1377
AfaI GTAC 1 cut(s) 469
AfiI CCNNNNNNNGG 4 cut(s) 67, 577, 972, 1103
AflII CTTAAG 1 cut(s) 155
AgsI TTSAA 7 cut(s) 139, 206, 628, 802, 1031, 1137, 1324
AhlI ACTAGT 1 cut(s) 329
AjuI GAANNNNNNNTTGG 6 cut(s) 695, 727, 950, 982, 1218, 1250
AloI GAACNNNNNNTCC 4 cut(s) 390, 422, 592, 624
Alw26I GTCTC 4 cut(s) 165, 500, 848, 1260
AlwI GGATC 3 cut(s) 588, 602, 788
Ama87I CYCGRG 1 cut(s) 162
Aor13HI TCCGGA 2 cut(s) 226, 916
AoxI GGCC 2 cut(s) 983, 1178
ApeKI GCWGC 2 cut(s) 389, 441
ApoI RAATTY 3 cut(s) 134, 461, 1132
AseI ATTAAT 1 cut(s) 1295
Asp700I GAANNNNTTC 2 cut(s) 549, 924
AspLEI GCGC 1 cut(s) 1434
AspS9I GGNCC 2 cut(s) 167, 758
AvaI CYCGRG 1 cut(s) 162
AvaII GGWCC 2 cut(s) 167, 758
BaeGI GKGCMC 1 cut(s) 1073
BalI TGGCCA 1 cut(s) 1180
BanI GGYRCC 1 cut(s) 1068
BbsI GAAGAC 1 cut(s) 1311
BbvI GCAGC 2 cut(s) 376, 453
BccI CCATC 7 cut(s) 58, 176, 212, 218, 353, 1101, 1105
BciVI GTATCC 1 cut(s) 806
BcoDI GTCTC 4 cut(s) 165, 500, 848, 1260
BcuI ACTAGT 1 cut(s) 329
BfaI CTAG 3 cut(s) 330, 530, 1352
BfmI CTRYAG 3 cut(s) 390, 603, 1213
BfrI CTTAAG 1 cut(s) 155
BfuI GTATCC 1 cut(s) 806
BisI GCNGC 4 cut(s) 246, 390, 442, 1019
BlsI GCNGC 4 cut(s) 247, 391, 443, 1020
Bme18I GGWCC 2 cut(s) 167, 758
BmeT110I CYCGRG 1 cut(s) 162
BmgT120I GGNCC 2 cut(s) 167, 758
BmiI GGNNCC 3 cut(s) 169, 294, 1070
BmsI GCATC 3 cut(s) 232, 682, 1158
BoxI GACNNNNGTC 1 cut(s) 1050
BpiI GAAGAC 1 cut(s) 1311
BpmI CTGGAG 2 cut(s) 321, 1179
BpuEI CTTGAG 3 cut(s) 497, 950, 1059
BsaI GGTCTC 1 cut(s) 500
BsaJI CCNNGG 1 cut(s) 636
BsaWI WCCGGW 2 cut(s) 226, 916
BsaXI ACNNNNNCTCC 2 cut(s) 319, 349
Bsc4I CCNNNNNNNGG 4 cut(s) 67, 577, 972, 1103
Bse1I ACTGG 2 cut(s) 44, 338
Bse3DI GCAATG 1 cut(s) 1334
BseAI TCCGGA 2 cut(s) 226, 916
BseDI CCNNGG 1 cut(s) 636
BseGI GGATG 3 cut(s) 210, 618, 1093
BseLI CCNNNNNNNGG 4 cut(s) 67, 577, 972, 1103
BseMI GCAATG 1 cut(s) 1334
BseNI ACTGG 2 cut(s) 44, 338
BseRI GAGGAG 1 cut(s) 715
BseSI GKGCMC 1 cut(s) 1073
BseXI GCAGC 2 cut(s) 376, 453
BshFI GGCC 2 cut(s) 985, 1180
BshNI GGYRCC 1 cut(s) 1068
BsiHKCI CYCGRG 1 cut(s) 162
BsiSI CCGG 2 cut(s) 227, 917
BslFI GGGAC 1 cut(s) 957
BslI CCNNNNNNNGG 4 cut(s) 67, 577, 972, 1103
BsmAI GTCTC 4 cut(s) 165, 500, 848, 1260
BsmBI CGTCTC 1 cut(s) 1260
BsmFI GGGAC 1 cut(s) 957
BsmI GAATGC 1 cut(s) 222
BsnI GGCC 2 cut(s) 985, 1180
Bso31I GGTCTC 1 cut(s) 500
BsoBI CYCGRG 1 cut(s) 162
Bsp1286I GDGCHC 1 cut(s) 1073
Bsp13I TCCGGA 2 cut(s) 226, 916
Bsp143I GATC 4 cut(s) 580, 607, 793, 1245
Bsp19I CCATGG 1 cut(s) 636
BspACI CCGC 6 cut(s) 9, 246, 905, 1019, 1125, 1373
BspANI GGCC 2 cut(s) 985, 1180
BspEI TCCGGA 2 cut(s) 226, 916
BspLI GGNNCC 3 cut(s) 169, 294, 1070
BspMAI CTGCAG 1 cut(s) 394
BspPI GGATC 3 cut(s) 588, 602, 788
BspT107I GGYRCC 1 cut(s) 1068
BspTI CTTAAG 1 cut(s) 155
BspTNI GGTCTC 1 cut(s) 500
BsrDI GCAATG 1 cut(s) 1334
BsrI ACTGG 2 cut(s) 44, 338
BssECI CCNNGG 1 cut(s) 636
BssMI GATC 4 cut(s) 580, 607, 793, 1245
BssT1I CCWWGG 1 cut(s) 636
Bst4CI ACNGT 4 cut(s) 818, 1208, 1217, 1379
Bst6I CTCTTC 1 cut(s) 629
BstAFI CTTAAG 1 cut(s) 155
BstC8I GCNNGC 2 cut(s) 439, 489
BstDSI CCRYGG 1 cut(s) 636
BstF5I GGATG 3 cut(s) 210, 618, 1093
BstHHI GCGC 1 cut(s) 1434
BstKTI GATC 4 cut(s) 583, 610, 796, 1248
BstMAI GTCTC 4 cut(s) 165, 500, 848, 1260
BstMBI GATC 4 cut(s) 580, 607, 793, 1245
BstMWI GCNNNNNNNGC 3 cut(s) 662, 1177, 1361
BstPAI GACNNNNGTC 1 cut(s) 1050
BstSFI CTRYAG 3 cut(s) 390, 603, 1213
BstSLI GKGCMC 1 cut(s) 1073
BstV1I GCAGC 2 cut(s) 376, 453
BstV2I GAAGAC 1 cut(s) 1311
BstX2I RGATCY 3 cut(s) 580, 607, 793
BstYI RGATCY 3 cut(s) 580, 607, 793
BsuI GTATCC 1 cut(s) 806
BsuRI GGCC 2 cut(s) 985, 1180
BtgI CCRYGG 1 cut(s) 636
BtsCI GGATG 3 cut(s) 210, 618, 1093
BtsI GCAGTG 4 cut(s) 904, 1120, 1346, 1365
BtsIMutI CAGTG 6 cut(s) 345, 904, 1120, 1251, 1346, 1365
Cac8I GCNNGC 2 cut(s) 439, 489
CfoI GCGC 1 cut(s) 1434
Cfr13I GGNCC 2 cut(s) 167, 758
Csp6I GTAC 1 cut(s) 468
CviAII CATG 4 cut(s) 29, 448, 637, 1240
CviQI GTAC 1 cut(s) 468
DpnI GATC 4 cut(s) 582, 609, 795, 1247
DpnII GATC 4 cut(s) 580, 607, 793, 1245
EaeI YGGCCR 1 cut(s) 1178
Eam1104I CTCTTC 1 cut(s) 629
EarI CTCTTC 1 cut(s) 629
Eco130I CCWWGG 1 cut(s) 636
Eco147I AGGCCT 1 cut(s) 985
Eco31I GGTCTC 1 cut(s) 500
Eco32I GATATC 1 cut(s) 568
Eco47I GGWCC 2 cut(s) 167, 758
Eco57I CTGAAG 2 cut(s) 651, 1377
Eco88I CYCGRG 1 cut(s) 162
EcoO109I RGGNCCY 1 cut(s) 167
EcoRI GAATTC 2 cut(s) 134, 1132
EcoRV GATATC 1 cut(s) 568
EcoT14I CCWWGG 1 cut(s) 636
ErhI CCWWGG 1 cut(s) 636
Esp3I CGTCTC 1 cut(s) 1260
FaeI CATG 4 cut(s) 32, 451, 640, 1243
FalI AAGNNNNNCTT 2 cut(s) 950, 982
FaqI GGGAC 1 cut(s) 957
FatI CATG 4 cut(s) 28, 447, 636, 1239
Fnu4HI GCNGC 4 cut(s) 246, 390, 442, 1019
FokI GGATG 3 cut(s) 197, 605, 1080
Fsp4HI GCNGC 4 cut(s) 246, 390, 442, 1019
FspBI CTAG 3 cut(s) 330, 530, 1352
GlaI GCGC 1 cut(s) 1433
GluI GCNGC 4 cut(s) 246, 390, 442, 1019
GsuI CTGGAG 2 cut(s) 321, 1179
HaeIII GGCC 2 cut(s) 985, 1180
HapII CCGG 2 cut(s) 227, 917
HhaI GCGC 1 cut(s) 1434
Hin1II CATG 4 cut(s) 32, 451, 640, 1243
Hin6I GCGC 1 cut(s) 1432
HinP1I GCGC 1 cut(s) 1432
HincII GTYRAC 1 cut(s) 127
HindII GTYRAC 1 cut(s) 127
HindIII AAGCTT 2 cut(s) 589, 663
HinfI GANTC 6 cut(s) 230, 269, 405, 453, 550, 913
HpaII CCGG 2 cut(s) 227, 917
Hpy166II GTNNAC 2 cut(s) 127, 372
Hpy188I TCNGA 3 cut(s) 235, 278, 358
Hpy8I GTNNAC 2 cut(s) 127, 372
HpyAV CCTTC 2 cut(s) 820, 976
HpyCH4III ACNGT 4 cut(s) 818, 1208, 1217, 1379
HpyF10VI GCNNNNNNNGC 3 cut(s) 662, 1177, 1361
Hsp92II CATG 4 cut(s) 32, 451, 640, 1243
HspAI GCGC 1 cut(s) 1432
Kpn2I TCCGGA 2 cut(s) 226, 916
Kzo9I GATC 4 cut(s) 580, 607, 793, 1245
LmnI GCTCC 3 cut(s) 298, 966, 1375
Lsp1109I GCAGC 2 cut(s) 376, 453
LweI GCATC 3 cut(s) 232, 682, 1158
MaeI CTAG 3 cut(s) 330, 530, 1352
MaeIII GTNAC 5 cut(s) 302, 340, 514, 1150, 1208
MalI GATC 4 cut(s) 582, 609, 795, 1247
MboI GATC 4 cut(s) 580, 607, 793, 1245
MfeI CAATTG 4 cut(s) 411, 753, 876, 1402
MflI RGATCY 3 cut(s) 580, 607, 793
MhlI GDGCHC 1 cut(s) 1073
MlsI TGGCCA 1 cut(s) 1180
MluNI TGGCCA 1 cut(s) 1180
MlyI GAGTC 2 cut(s) 263, 907
MmeI TCCRAC 3 cut(s) 790, 1084, 1109
Mox20I TGGCCA 1 cut(s) 1180
MroI TCCGGA 2 cut(s) 226, 916
MroXI GAANNNNTTC 2 cut(s) 549, 924
MscI TGGCCA 1 cut(s) 1180
MseI TTAA 8 cut(s) 78, 83, 156, 498, 575, 1115, 1295, 1424
MslI CAYNNNNRTG 1 cut(s) 1339
Msp20I TGGCCA 1 cut(s) 1180
MspA1I CMGCKG 3 cut(s) 389, 671, 1157
MspCI CTTAAG 1 cut(s) 155
MspI CCGG 2 cut(s) 227, 917
MunI CAATTG 4 cut(s) 411, 753, 876, 1402
Mva1269I GAATGC 1 cut(s) 222
MwoI GCNNNNNNNGC 3 cut(s) 662, 1177, 1361
NcoI CCATGG 1 cut(s) 636
NdeII GATC 4 cut(s) 580, 607, 793, 1245
NlaIII CATG 4 cut(s) 32, 451, 640, 1243
NlaIV GGNNCC 3 cut(s) 169, 294, 1070
NmuCI GTSAC 3 cut(s) 302, 340, 514
PaeR7I CTCGAG 1 cut(s) 162
PceI AGGCCT 1 cut(s) 985
PctI GAATGC 1 cut(s) 222
PdmI GAANNNNTTC 2 cut(s) 549, 924
PfeI GAWTC 4 cut(s) 230, 405, 453, 550
PflFI GACNNNGTC 1 cut(s) 272
PflMI CCANNNNNTGG 1 cut(s) 1103
PkrI GCNGC 4 cut(s) 247, 391, 443, 1020
PleI GAGTC 2 cut(s) 263, 907
PpsI GAGTC 2 cut(s) 263, 907
PpuMI RGGWCCY 1 cut(s) 167
PshAI GACNNNNGTC 1 cut(s) 1050
PshBI ATTAAT 1 cut(s) 1295
Psp5II RGGWCCY 1 cut(s) 167
PspN4I GGNNCC 3 cut(s) 169, 294, 1070
PspPI GGNCC 2 cut(s) 167, 758
PspPPI RGGWCCY 1 cut(s) 167
PstI CTGCAG 1 cut(s) 394
PsuI RGATCY 3 cut(s) 580, 607, 793
PsyI GACNNNGTC 1 cut(s) 272
PvuII CAGCTG 3 cut(s) 389, 671, 1157
RsaI GTAC 1 cut(s) 469
RsaNI GTAC 1 cut(s) 468
RseI CAYNNNNRTG 1 cut(s) 1339
SaqAI TTAA 8 cut(s) 78, 83, 156, 498, 575, 1115, 1295, 1424
SatI GCNGC 4 cut(s) 246, 390, 442, 1019
Sau3AI GATC 4 cut(s) 580, 607, 793, 1245
Sau96I GGNCC 2 cut(s) 167, 758
SchI GAGTC 2 cut(s) 263, 907
SduI GDGCHC 1 cut(s) 1073
SfaNI GCATC 3 cut(s) 232, 682, 1158
SfcI CTRYAG 3 cut(s) 390, 603, 1213
Sfr274I CTCGAG 1 cut(s) 162
SinI GGWCC 2 cut(s) 167, 758
SlaI CTCGAG 1 cut(s) 162
SmiMI CAYNNNNRTG 1 cut(s) 1339
SmlI CTYRAG 5 cut(s) 155, 162, 476, 929, 1074
SmoI CTYRAG 5 cut(s) 155, 162, 476, 929, 1074
SpeI ACTAGT 1 cut(s) 329
SseBI AGGCCT 1 cut(s) 985
SsiI CCGC 6 cut(s) 9, 246, 905, 1019, 1125, 1373
SspMI CTAG 3 cut(s) 330, 530, 1352
StuI AGGCCT 1 cut(s) 985
StyI CCWWGG 1 cut(s) 636
TaaI ACNGT 4 cut(s) 818, 1208, 1217, 1379
TaqI TCGA 4 cut(s) 163, 180, 598, 648
TauI GCSGC 2 cut(s) 248, 1021
TfiI GAWTC 4 cut(s) 230, 405, 453, 550
Tru1I TTAA 8 cut(s) 78, 83, 156, 498, 575, 1115, 1295, 1424
Tru9I TTAA 8 cut(s) 78, 83, 156, 498, 575, 1115, 1295, 1424
TscAI CASTG 6 cut(s) 345, 904, 1127, 1258, 1346, 1372
TseFI GTSAC 3 cut(s) 302, 340, 514
TseI GCWGC 2 cut(s) 389, 441
Tsp45I GTSAC 3 cut(s) 302, 340, 514
TspDTI ATGAA 3 cut(s) 252, 436, 1374
TspGWI ACGGA 2 cut(s) 455, 560
TspRI CASTG 6 cut(s) 345, 904, 1127, 1258, 1346, 1372
Tth111I GACNNNGTC 1 cut(s) 272
Van91I CCANNNNNTGG 1 cut(s) 1103
Vha464I CTTAAG 1 cut(s) 155
VpaK11BI GGWCC 2 cut(s) 167, 758
VspI ATTAAT 1 cut(s) 1295
XapI RAATTY 3 cut(s) 134, 461, 1132
XbaI TCTAGA 1 cut(s) 529
XcmI CCANNNNNNNNNTGG 1 cut(s) 1100
XhoI CTCGAG 1 cut(s) 162
XmnI GAANNNNTTC 2 cut(s) 549, 924
XspI CTAG 3 cut(s) 330, 530, 1352
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.