Rorug03G0256900

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Reverse (-)
24464478 .. 24465442
965 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0256900.1

Sequence Viewer

Length: 423 bp
ATGGTCTGGCAGTATTGGGTCATGGTGCTGGAGGGAGTGGCTTTCTTCTTGAGGTTGGCTGCGGGGATGTGCGTTGCCTCTTGGGGGAGTATGGAGAAAAAGCTTGCTGCAAACTTGCAAAGGCAAACAGGAAAAATTTCATCTGTGTCATGTCTTTTGCTGGCTTTGGTTAGCTTTATCTTTTGGAAGAAGAAAGAAACAACGGACAGTGATGAAGAACCTATTGGTGATGCCATTGACAATGAATTTGAACAAGGGACTGGCTCCATAAAGTTTTTGTACGGCGATCTAGTTCGGGCAACTAGTAACTTTCAAGAGGAAGAAAAGCTTGGCCAGGGAGGATTTGGTGGGGTTTATAAGGGATTCATAAAGGACTTGAACTCATATGTAGCTGCGAAGAGGATATCCAAAGGAGGAATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

140

Amino Acids

15.46

Weight (kDa)

6.3

Isoelectric Point (pI)

24.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000097)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g17511 FvH4_3g17550 FvH4_3g17550 FvH4_3g17550 FvH4_6g39790 FvH4_6g39792 FvH4_6g39810 FvH4_6g39810 FvH4_6g39810 FvH4_6g39811 FvH4_6g39813 FvH4_6g39814 FvH4_6g39814 FvH4_6g39840 FvH4_6g39842 FvH4_6g39843 FvH4_6g39845 FvH4_6g39850 FvH4_6g39870 FvH4_6g39871 FvH4_6g39871 FvH4_6g39871 FvH4_6g39872
malus_domestica MD00G1121500.v1.1 MD09G1135900.v1.1 MD09G1136000.v1.1 MD09G1136200.v1.1 MD09G1142300.v1.1 MD09G1142500.v1.1 MD09G1142800.v1.1 MD11G1215800.v1.1 MD13G1225900.v1.1 MD13G1226000.v1.1 MD16G1231000.v1.1 MD16G1231100.v1.1 MD17G1124400.v1.1 MD17G1124800.v1.1 MD17G1124900.v1.1 MD17G1125000.v1.1 MD17G1125400.v1.1 MD17G1125700.v1.1 MD17G1125800.v1.1 MD17G1125900.v1.1 MD17G1126300.v1.1 MD17G1126400.v1.1 MD17G1126700.v1.1 MD17G1126800.v1.1 MD17G1126900.v1.1
prunus_persica Prupe.1G053100_v2.0.a1 Prupe.1G053200_v2.0.a1 Prupe.1G053300_v2.0.a1 Prupe.1G053400_v2.0.a1 Prupe.1G053500_v2.0.a1 Prupe.1G055800_v2.0.a1 Prupe.3G188400_v2.0.a1 Prupe.3G188500_v2.0.a1 Prupe.3G188600_v2.0.a1 Prupe.3G188700_v2.0.a1 Prupe.3G189100_v2.0.a1 Prupe.3G189300_v2.0.a1 Prupe.3G189500_v2.0.a1 Prupe.3G189600_v2.0.a1 Prupe.3G189700_v2.0.a1 Prupe.3G190100_v2.0.a1 Prupe.3G190300_v2.0.a1 Prupe.3G190400_v2.0.a1 Prupe.3G190500_v2.0.a1 Prupe.3G190600_v2.0.a1 Prupe.3G190800_v2.0.a1 Prupe.4G236600_v2.0.a1 Prupe.4G236700_v2.0.a1 Prupe.4G236800_v2.0.a1 Prupe.4G237000_v2.0.a1
pyrus_communis pycom09g05690 pycom09g05700 pycom09g05710 pycom09g05720 pycom09g05730 pycom09g05740 pycom09g05750 pycom09g05760 pycom09g05770 pycom09g06250 pycom09g06260 pycom09g06280 pycom13g19910 pycom16g19350 pycom17g11590 pycom17g11650 pycom17g11670 pycom17g11680 pycom17g11690 pycom17g11760 pycom17g11780 pycom17g11800 pycom17g11820 pycom17g11830 pycom17g11860 pycom17g11870
rosa_chinensis RchiOBHm_Chr1g0340871 RchiOBHm_Chr2g0124501 RchiOBHm_Chr2g0149801 RchiOBHm_Chr2g0149811 RchiOBHm_Chr2g0153911 RchiOBHm_Chr2g0153971 RchiOBHm_Chr2g0153981 RchiOBHm_Chr2g0154001 RchiOBHm_Chr2g0154021 RchiOBHm_Chr2g0154031 RchiOBHm_Chr2g0154041 RchiOBHm_Chr2g0154061 RchiOBHm_Chr2g0154071 RchiOBHm_Chr2g0154151 RchiOBHm_Chr2g0154191 RchiOBHm_Chr2g0154221 RchiOBHm_Chr2g0154301 RchiOBHm_Chr2g0154321 RchiOBHm_Chr2g0154331 RchiOBHm_Chr2g0154341 RchiOBHm_Chr2g0154351 RchiOBHm_Chr2g0154371 RchiOBHm_Chr5g0029061 RchiOBHm_Chr5g0029111 RchiOBHm_Chr5g0029131 RchiOBHm_Chr5g0029151 RchiOBHm_Chr5g0029271 RchiOBHm_Chr5g0038461 RchiOBHm_Chr5g0038821 RchiOBHm_Chr5g0059331 RchiOBHm_Chr7g0211221
rosa_laevigata RLG00000003018 RLG00000009631 RLG00000018804 RLG00000019613 RLG00000019617 RLG00000020446 RLG00000020447 RLG00000020738 RLG00000020742 RLG00000020743 RLG00000020746 RLG00000020752 RLG00000020754 RLG00000020755 RLG00000020756 RLG00000020759 RLG00000020761 RLG00000020762 RLG00000020765 RLG00000020770 RLG00000020771 RLG00000020772 RLG00000020773 RLG00000020774 RLG00000033136 RLG00000033146 RLG00000033148 RLG00000033870 RLG00000033876
rosa_multiflora Rmu_co8137600.1_g000001 Rmu_co8174218.1_g000001 Rmu_co8313823.1_g000001 Rmu_sc0000533.1_g000092 Rmu_sc0000857.1_g000006 Rmu_sc0000857.1_g000021 Rmu_sc0000857.1_g000028 Rmu_sc0001017.1_g000018 Rmu_sc0002214.1_g000001 Rmu_sc0002214.1_g000010 Rmu_sc0002474.1_g000003 Rmu_sc0002474.1_g000011 Rmu_sc0002474.1_g000015 Rmu_sc0003808.1_g000003 Rmu_sc0005195.1_g000001 Rmu_sc0005836.1_g000010 Rmu_sc0006451.1_g000005 Rmu_sc0007313.1_g000006 Rmu_sc0007324.1_g000011 Rmu_sc0012347.1_g000008 Rmu_sc0012977.1_g000001 Rmu_sc0014312.1_g000004 Rmu_sc0014312.1_g000005 Rmu_sc0015490.1_g000001 Rmu_sc0018451.1_g000003 Rmu_sc0022116.1_g000004 Rmu_sc0022116.1_g000005 Rmu_sc0025399.1_g000001 Rmu_sc0031326.1_g000001 Rmu_sc0031654.1_g000002 Rmu_ssc0000308.1_g000037
rosa_roxburghii Rroxscaffold_1G00042160 Rroxscaffold_1G00042210 Rroxscaffold_1G00050730 Rroxscaffold_1G00050780 Rroxscaffold_2G00094400 Rroxscaffold_2G00094410 Rroxscaffold_2G00094420 Rroxscaffold_2G00094440 Rroxscaffold_2G00094470 Rroxscaffold_2G00094480 Rroxscaffold_2G00094490 Rroxscaffold_2G00094510 Rroxscaffold_2G00094520 Rroxscaffold_2G00094530 Rroxscaffold_2G00094540 Rroxscaffold_2G00094550 Rroxscaffold_2G00094560 Rroxscaffold_2G00094590 Rroxscaffold_2G00094660 Rroxscaffold_2G00097680 Rroxscaffold_2G00121030 Rroxscaffold_2G00121040 Rroxscaffold_5G00340200
rosa_rugosa Rorug02G0416600 Rorug02G0416700 Rorug02G0443200 Rorug02G0443400 Rorug02G0443500 Rorug02G0443600 Rorug02G0443700 Rorug02G0443900 Rorug02G0444000 Rorug03G0256900 Rorug03G0257000 Rorug05G0112400 Rorug05G0112600 Rorug05G0174300 Rorug07G0124600
rosa_samantha Rh2BG318500 Rh2BG487300 Rh2BG487500 Rh2BG516900 Rh2BG517000 Rh2BG518000 Rh2BG518100 Rh2BG518300 Rh2BG518400 Rh2BG518500 Rh2BG519400 Rh2BG519500 Rh2BG519600 Rh2BG519700 Rh5BG203100 Rh5BG203500 Rh5BG265800 Rh5BG398100 Rh7CG273600
rosa_wichuraiana Rw2G038790 Rw2G038800 Rw2G041610 Rw2G041620 Rw2G041640 Rw2G041660 Rw2G041670 Rw2G041680 Rw2G041690 Rw2G041700 Rw2G041720 Rw2G041730 Rw2G041740 Rw2G041750 Rw5G018550 Rw5G018570 Rw5G018590 Rw5G018610 Rw5G024410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 357
AciI CCGC 1 cut(s) 62
AcoI YGGCCR 1 cut(s) 331
AcsI RAATTY 2 cut(s) 135, 245
AfaI GTAC 1 cut(s) 281
AfiI CCNNNNNNNGG 1 cut(s) 84
AgsI TTSAA 3 cut(s) 251, 314, 379
AhlI ACTAGT 1 cut(s) 302
AjnI CCWGG 1 cut(s) 333
AjuI GAANNNNNNNTTGG 4 cut(s) 207, 239, 312, 344
AluBI AGCT 4 cut(s) 103, 174, 328, 392
AluI AGCT 4 cut(s) 103, 174, 328, 392
AoxI GGCC 1 cut(s) 331
ApeKI GCWGC 3 cut(s) 59, 107, 392
ApoI RAATTY 2 cut(s) 135, 245
ArsI GACNNNNNNTTYG 2 cut(s) 230, 262
Asp700I GAANNNNTTC 1 cut(s) 136
AsuHPI GGTGA 1 cut(s) 239
BalI TGGCCA 1 cut(s) 333
BbvI GCAGC 3 cut(s) 46, 94, 379
BceAI ACGGC 1 cut(s) 298
BciT130I CCWGG 1 cut(s) 335
BcuI ACTAGT 1 cut(s) 302
BfaI CTAG 2 cut(s) 290, 303
BisI GCNGC 3 cut(s) 60, 108, 393
BlsI GCNGC 3 cut(s) 61, 109, 394
Bme1390I CCNGG 1 cut(s) 335
BmiI GGNNCC 1 cut(s) 265
BmrFI CCNGG 1 cut(s) 335
BmsI GCATC 1 cut(s) 220
BpmI CTGGAG 1 cut(s) 50
BpuEI CTTGAG 1 cut(s) 70
BsaJI CCNNGG 1 cut(s) 334
Bsc4I CCNNNNNNNGG 1 cut(s) 84
Bse1I ACTGG 1 cut(s) 265
BseBI CCWGG 1 cut(s) 335
BseDI CCNNGG 1 cut(s) 334
BseGI GGATG 1 cut(s) 72
BseLI CCNNNNNNNGG 1 cut(s) 84
BseNI ACTGG 1 cut(s) 265
BseXI GCAGC 3 cut(s) 46, 94, 379
BshFI GGCC 1 cut(s) 333
BslFI GGGAC 1 cut(s) 271
BslI CCNNNNNNNGG 1 cut(s) 84
BsmFI GGGAC 1 cut(s) 271
BsnI GGCC 1 cut(s) 333
Bsp143I GATC 1 cut(s) 286
BspACI CCGC 1 cut(s) 62
BspANI GGCC 1 cut(s) 333
BspLI GGNNCC 1 cut(s) 265
BsrI ACTGG 1 cut(s) 265
BssECI CCNNGG 1 cut(s) 334
BssMI GATC 1 cut(s) 286
Bst2UI CCWGG 1 cut(s) 335
Bst4CI ACNGT 1 cut(s) 209
Bst6I CTCTTC 1 cut(s) 392
BstC8I GCNNGC 2 cut(s) 105, 162
BstF5I GGATG 1 cut(s) 72
BstKTI GATC 1 cut(s) 289
BstMBI GATC 1 cut(s) 286
BstNI CCWGG 1 cut(s) 335
BstSCI CCNGG 1 cut(s) 333
BstV1I GCAGC 3 cut(s) 46, 94, 379
BsuRI GGCC 1 cut(s) 333
BtsCI GGATG 1 cut(s) 72
BtsIMutI CAGTG 1 cut(s) 214
Cac8I GCNNGC 2 cut(s) 105, 162
Csp6I GTAC 1 cut(s) 280
CviAII CATG 2 cut(s) 22, 150
CviJI RGCY 9 cut(s) 41, 59, 103, 164, 174, 264, 328, 333, 392
CviKI_1 RGCY 9 cut(s) 41, 59, 103, 164, 174, 264, 328, 333, 392
CviQI GTAC 1 cut(s) 280
DpnI GATC 1 cut(s) 288
DpnII GATC 1 cut(s) 286
EaeI YGGCCR 1 cut(s) 331
Eam1104I CTCTTC 1 cut(s) 392
EarI CTCTTC 1 cut(s) 392
Eco32I GATATC 1 cut(s) 405
EcoRII CCWGG 1 cut(s) 333
EcoRV GATATC 1 cut(s) 405
FaeI CATG 2 cut(s) 25, 153
FaiI YATR 9 cut(s) 23, 92, 151, 269, 357, 368, 385, 387, 421
FalI AAGNNNNNCTT 2 cut(s) 312, 344
FaqI GGGAC 1 cut(s) 271
FatI CATG 2 cut(s) 21, 149
FauI CCCGC 1 cut(s) 55
FauNDI CATATG 1 cut(s) 385
Fnu4HI GCNGC 3 cut(s) 60, 108, 393
FokI GGATG 1 cut(s) 79
Fsp4HI GCNGC 3 cut(s) 60, 108, 393
FspBI CTAG 2 cut(s) 290, 303
GluI GCNGC 3 cut(s) 60, 108, 393
GsuI CTGGAG 1 cut(s) 50
HaeIII GGCC 1 cut(s) 333
Hin1II CATG 2 cut(s) 25, 153
HindIII AAGCTT 2 cut(s) 101, 326
HinfI GANTC 1 cut(s) 363
HphI GGTGA 1 cut(s) 239
Hpy188III TCNNGA 2 cut(s) 49, 314
HpyCH4III ACNGT 1 cut(s) 209
HpyCH4V TGCA 2 cut(s) 110, 118
Hsp92II CATG 2 cut(s) 25, 153
Kzo9I GATC 1 cut(s) 286
LmnI GCTCC 1 cut(s) 269
LpnPI CCDG 6 cut(s) 14, 114, 146, 246, 320, 347
Lsp1109I GCAGC 3 cut(s) 46, 94, 379
LweI GCATC 1 cut(s) 220
MaeI CTAG 2 cut(s) 290, 303
MaeIII GTNAC 1 cut(s) 305
MalI GATC 1 cut(s) 288
MboI GATC 1 cut(s) 286
MboII GAAGA 6 cut(s) 37, 199, 202, 227, 332, 409
MlsI TGGCCA 1 cut(s) 333
MluCI AATT 2 cut(s) 135, 245
MluNI TGGCCA 1 cut(s) 333
MnlI CCTC 7 cut(s) 25, 45, 88, 310, 332, 393, 407
Mox20I TGGCCA 1 cut(s) 333
MroXI GAANNNNTTC 1 cut(s) 136
MscI TGGCCA 1 cut(s) 333
Msp20I TGGCCA 1 cut(s) 333
MspR9I CCNGG 1 cut(s) 335
MvaI CCWGG 1 cut(s) 335
NdeI CATATG 1 cut(s) 385
NdeII GATC 1 cut(s) 286
NlaIII CATG 2 cut(s) 25, 153
NlaIV GGNNCC 1 cut(s) 265
PdmI GAANNNNTTC 1 cut(s) 136
PfeI GAWTC 1 cut(s) 363
PkrI GCNGC 3 cut(s) 61, 109, 394
PsiI TTATAA 1 cut(s) 357
Psp6I CCWGG 1 cut(s) 333
PspGI CCWGG 1 cut(s) 333
PspN4I GGNNCC 1 cut(s) 265
RsaI GTAC 1 cut(s) 281
RsaNI GTAC 1 cut(s) 280
SatI GCNGC 3 cut(s) 60, 108, 393
Sau3AI GATC 1 cut(s) 286
ScrFI CCNGG 1 cut(s) 335
SetI ASST 6 cut(s) 56, 105, 176, 223, 330, 394
SfaNI GCATC 1 cut(s) 220
SmlI CTYRAG 1 cut(s) 49
SmoI CTYRAG 1 cut(s) 49
SpeI ACTAGT 1 cut(s) 302
Sse9I AATT 2 cut(s) 135, 245
SsiI CCGC 1 cut(s) 62
SspMI CTAG 2 cut(s) 290, 303
StyD4I CCNGG 1 cut(s) 333
TaaI ACNGT 1 cut(s) 209
TasI AATT 2 cut(s) 135, 245
TfiI GAWTC 1 cut(s) 363
TscAI CASTG 1 cut(s) 214
TseI GCWGC 3 cut(s) 59, 107, 392
TspDTI ATGAA 4 cut(s) 129, 228, 258, 355
TspGWI ACGGA 1 cut(s) 218
TspRI CASTG 1 cut(s) 214
XapI RAATTY 2 cut(s) 135, 245
XcmI CCANNNNNNNNNTGG 1 cut(s) 341
XmnI GAANNNNTTC 1 cut(s) 136
XspI CTAG 2 cut(s) 290, 303
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.